2019-11-23T00:58:29 Created temporary directory: /tmp/pip-ephem-wheel-cache-mggx3bkf 2019-11-23T00:58:29 Created temporary directory: /tmp/pip-req-tracker-6g6ohbc_ 2019-11-23T00:58:29 Created requirements tracker '/tmp/pip-req-tracker-6g6ohbc_' 2019-11-23T00:58:29 Created temporary directory: /tmp/pip-wheel-zmial2ns 2019-11-23T00:58:29 Collecting topopy==1.0.0.dev4639326 2019-11-23T00:58:29 1 location(s) to search for versions of topopy: 2019-11-23T00:58:29 * https://pypi.org/simple/topopy/ 2019-11-23T00:58:29 Getting page https://pypi.org/simple/topopy/ 2019-11-23T00:58:29 Analyzing links from page https://pypi.org/simple/topopy/ 2019-11-23T00:58:29 Found link https://files.pythonhosted.org/packages/34/a5/ed5bc6d6e56350d7caf0e48706ddc668e0645968d9631ae2bd0a1965a6ac/topopy-0.0.1.tar.gz#sha256=45f9bebd36ecf85839ae704a6e67691a72ee4adb1e2924bcb8357cd9ab3733fe (from https://pypi.org/simple/topopy/) (requires-python:>=2.7, <4), version: 0.0.1 2019-11-23T00:58:29 Found link https://files.pythonhosted.org/packages/f1/6a/027730be08c9913a9babd8d7c8853fed6f2be0c6fb52de6e21fee5a73018/topopy-0.0.2.tar.gz#sha256=30d2b55b27454fea3becf535b443bbad52f6025d3dc1a6bfc1b6ef761282600c (from https://pypi.org/simple/topopy/) (requires-python:>=2.7, <4), version: 0.0.2 2019-11-23T00:58:29 Found link https://files.pythonhosted.org/packages/ad/e9/b11e375eaf5fa63cf9c3bc634355f36d85aeaea5b0e94ff2f42da91c429f/topopy-0.0.3.tar.gz#sha256=35f40dab5115298413a06af31ada0d2967d0a43a94505685fb7cc731086b2f98 (from https://pypi.org/simple/topopy/), version: 0.0.3 2019-11-23T00:58:29 Found link https://files.pythonhosted.org/packages/37/89/0e5eadb0dba1b9db78904035de2d49739e49a107ea0be5a1a938ee6b9954/topopy-0.0.4.tar.gz#sha256=d96f5944be8d88793f8828aafaec603acd2a0b2186709f587307665cc8e4912c (from https://pypi.org/simple/topopy/) (requires-python:>=2.7, <4), version: 0.0.4 2019-11-23T00:58:29 Found link https://files.pythonhosted.org/packages/17/ed/7df44851ef043d8ef348ea55f036a8a944e03caee6bebfd2ed5f4d4dd8b9/topopy-0.0.5.0.tar.gz#sha256=fd60387d1eb1aab50d2e2fe540ca1befe92acc20ae12e57444f28fb4c1cc38fe (from https://pypi.org/simple/topopy/) (requires-python:>=2.7, <4), version: 0.0.5.0 2019-11-23T00:58:29 Found link https://files.pythonhosted.org/packages/94/fb/69a27d2a821bb4f5d005bac36b2aef5ca2678c7062ffec71117e25977c05/topopy-0.0.6.tar.gz#sha256=73d5fc90cc0f2885754c4b93bafbe3c287fe45aab8c785d61a151e5ce6b2bb5a (from https://pypi.org/simple/topopy/) (requires-python:>=2.7, <4), version: 0.0.6 2019-11-23T00:58:29 Found link https://files.pythonhosted.org/packages/06/ec/214ff072d809d43e5ea23006491dafc46c3d39a170f64767f3d6c9349136/topopy-0.1.0.tar.gz#sha256=c80a7dbeb2e8f6c31a91efdcccdd30178dc829ccf0ea154d2c7f04a926521299 (from https://pypi.org/simple/topopy/) (requires-python:>=2.7, <4), version: 0.1.0 2019-11-23T00:58:29 Found link https://files.pythonhosted.org/packages/78/7d/9691d6c2b3313d7a1321a76df3954243685a076c7d78b32f1d6ca123472f/topopy-0.1.1.tar.gz#sha256=27ca872dc4dc3f8515ce4837ac6d7786cad245003db3309020b6e5543f965b97 (from https://pypi.org/simple/topopy/) (requires-python:>=2.7, <4), version: 0.1.1 2019-11-23T00:58:29 Found link https://files.pythonhosted.org/packages/8f/8d/7674fc57eea376c6404743a80253e5e48830df907369580108cb94470fd3/topopy-1.0.0.dev4639326.tar.gz#sha256=af00771e966d88f5d79332b3d41b0715e03ab737e6e3a5d9908bea266f6bba37 (from https://pypi.org/simple/topopy/) (requires-python:>=2.7, <4), version: 1.0.0.dev4639326 2019-11-23T00:58:29 Found link https://files.pythonhosted.org/packages/63/de/d8d110f9e32e56498c5a6a14029b9db9fe6188b9cd5a20c6e35b75935c8c/topopy-1.0.0.tar.gz#sha256=cc71de37efd943a20467bc037f128df6569483d4567f375c3801d30cc5b4a83d (from https://pypi.org/simple/topopy/) (requires-python:>=2.7, <4), version: 1.0.0 2019-11-23T00:58:29 Using version 1.0.0.dev4639326 (newest of versions: 1.0.0.dev4639326) 2019-11-23T00:58:29 Created temporary directory: /tmp/pip-unpack-wjr8bz3t 2019-11-23T00:58:29 Downloading https://files.pythonhosted.org/packages/8f/8d/7674fc57eea376c6404743a80253e5e48830df907369580108cb94470fd3/topopy-1.0.0.dev4639326.tar.gz (115kB) 2019-11-23T00:58:29 Downloading from URL https://files.pythonhosted.org/packages/8f/8d/7674fc57eea376c6404743a80253e5e48830df907369580108cb94470fd3/topopy-1.0.0.dev4639326.tar.gz#sha256=af00771e966d88f5d79332b3d41b0715e03ab737e6e3a5d9908bea266f6bba37 (from https://pypi.org/simple/topopy/) (requires-python:>=2.7, <4) 2019-11-23T00:58:29 Added topopy==1.0.0.dev4639326 from https://files.pythonhosted.org/packages/8f/8d/7674fc57eea376c6404743a80253e5e48830df907369580108cb94470fd3/topopy-1.0.0.dev4639326.tar.gz#sha256=af00771e966d88f5d79332b3d41b0715e03ab737e6e3a5d9908bea266f6bba37 to build tracker '/tmp/pip-req-tracker-6g6ohbc_' 2019-11-23T00:58:29 Running setup.py (path:/tmp/pip-wheel-zmial2ns/topopy/setup.py) egg_info for package topopy 2019-11-23T00:58:29 Running command python setup.py egg_info 2019-11-23T00:58:32 running egg_info 2019-11-23T00:58:32 creating pip-egg-info/topopy.egg-info 2019-11-23T00:58:32 writing pip-egg-info/topopy.egg-info/PKG-INFO 2019-11-23T00:58:32 writing dependency_links to pip-egg-info/topopy.egg-info/dependency_links.txt 2019-11-23T00:58:32 writing requirements to pip-egg-info/topopy.egg-info/requires.txt 2019-11-23T00:58:32 writing top-level names to pip-egg-info/topopy.egg-info/top_level.txt 2019-11-23T00:58:32 writing manifest file 'pip-egg-info/topopy.egg-info/SOURCES.txt' 2019-11-23T00:58:33 reading manifest file 'pip-egg-info/topopy.egg-info/SOURCES.txt' 2019-11-23T00:58:33 reading manifest template 'MANIFEST.in' 2019-11-23T00:58:33 writing manifest file 'pip-egg-info/topopy.egg-info/SOURCES.txt' 2019-11-23T00:58:34 Source in /tmp/pip-wheel-zmial2ns/topopy has version 1.0.0.dev4639326, which satisfies requirement topopy==1.0.0.dev4639326 from https://files.pythonhosted.org/packages/8f/8d/7674fc57eea376c6404743a80253e5e48830df907369580108cb94470fd3/topopy-1.0.0.dev4639326.tar.gz#sha256=af00771e966d88f5d79332b3d41b0715e03ab737e6e3a5d9908bea266f6bba37 2019-11-23T00:58:34 Removed topopy==1.0.0.dev4639326 from https://files.pythonhosted.org/packages/8f/8d/7674fc57eea376c6404743a80253e5e48830df907369580108cb94470fd3/topopy-1.0.0.dev4639326.tar.gz#sha256=af00771e966d88f5d79332b3d41b0715e03ab737e6e3a5d9908bea266f6bba37 from build tracker '/tmp/pip-req-tracker-6g6ohbc_' 2019-11-23T00:58:34 Building wheels for collected packages: topopy 2019-11-23T00:58:34 Created temporary directory: /tmp/pip-wheel-xvxl0_ed 2019-11-23T00:58:34 Building wheel for topopy (setup.py): started 2019-11-23T00:58:34 Destination directory: /tmp/pip-wheel-xvxl0_ed 2019-11-23T00:58:34 Running command /usr/bin/python3 -u -c 'import setuptools, tokenize;__file__='"'"'/tmp/pip-wheel-zmial2ns/topopy/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-xvxl0_ed 2019-11-23T00:58:35 running bdist_wheel 2019-11-23T00:58:35 running build 2019-11-23T00:58:35 running build_py 2019-11-23T00:58:35 creating build 2019-11-23T00:58:35 creating build/lib.linux-armv7l-3.7 2019-11-23T00:58:35 creating build/lib.linux-armv7l-3.7/topopy 2019-11-23T00:58:35 copying topopy/MergeTree.py -> build/lib.linux-armv7l-3.7/topopy 2019-11-23T00:58:35 copying topopy/TopologicalObject.py -> build/lib.linux-armv7l-3.7/topopy 2019-11-23T00:58:35 copying topopy/topology.py -> build/lib.linux-armv7l-3.7/topopy 2019-11-23T00:58:35 copying topopy/MorseSmaleComplex.py -> build/lib.linux-armv7l-3.7/topopy 2019-11-23T00:58:35 copying topopy/__init__.py -> build/lib.linux-armv7l-3.7/topopy 2019-11-23T00:58:35 copying topopy/ContourTree.py -> build/lib.linux-armv7l-3.7/topopy 2019-11-23T00:58:35 copying topopy/MorseComplex.py -> build/lib.linux-armv7l-3.7/topopy 2019-11-23T00:58:35 running build_ext 2019-11-23T00:58:36 building '_topology' extension 2019-11-23T00:58:36 creating build/temp.linux-armv7l-3.7 2019-11-23T00:58:36 arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.7m -c UnionFind.cpp -o build/temp.linux-armv7l-3.7/UnionFind.o -O3 -march=native 2019-11-23T00:58:44 arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.7m -c MergeTree.cpp -o build/temp.linux-armv7l-3.7/MergeTree.o -O3 -march=native 2019-11-23T00:59:06 arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.7m -c MorseComplex.cpp -o build/temp.linux-armv7l-3.7/MorseComplex.o -O3 -march=native 2019-11-23T00:59:16 In file included from /usr/include/c++/8/bits/stl_algo.h:61, 2019-11-23T00:59:16 from /usr/include/c++/8/algorithm:62, 2019-11-23T00:59:16 from MorseComplex.cpp:5: 2019-11-23T00:59:16 /usr/include/c++/8/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Distance = int; _Tp = double; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: 2019-11-23T00:59:16 /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 2019-11-23T00:59:16 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, 2019-11-23T00:59:16 ^~~~~~~~~~~~~ 2019-11-23T00:59:16 In file included from /usr/include/c++/8/algorithm:62, 2019-11-23T00:59:16 from MorseComplex.cpp:5: 2019-11-23T00:59:16 /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: 2019-11-23T00:59:16 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 2019-11-23T00:59:16 __insertion_sort(_RandomAccessIterator __first, 2019-11-23T00:59:16 ^~~~~~~~~~~~~~~~ 2019-11-23T00:59:16 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 2019-11-23T00:59:16 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 2019-11-23T00:59:16 /usr/include/c++/8/bits/stl_algo.h: In function ‘void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: 2019-11-23T00:59:16 /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 2019-11-23T00:59:16 __introsort_loop(_RandomAccessIterator __first, 2019-11-23T00:59:16 ^~~~~~~~~~~~~~~~ 2019-11-23T00:59:16 /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 2019-11-23T00:59:16 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 2019-11-23T00:59:16 std::__introsort_loop(__cut, __last, __depth_limit, __comp); 2019-11-23T00:59:16 ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2019-11-23T00:59:16 In file included from /usr/include/c++/8/map:60, 2019-11-23T00:59:16 from MorseComplex.h:4, 2019-11-23T00:59:16 from MorseComplex.cpp:1: 2019-11-23T00:59:16 /usr/include/c++/8/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = int; _Val = std::pair >; _KeyOfValue = std::_Select1st > >; _Compare = std::less; _Alloc = std::allocator > >]’: 2019-11-23T00:59:16 /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type ‘std::_Rb_tree >, std::_Select1st > >, std::less, std::allocator > > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator > >’} changed in GCC 7.1 2019-11-23T00:59:16 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: 2019-11-23T00:59:16 ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2019-11-23T00:59:17 /usr/include/c++/8/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple&>, std::tuple<>}; _Key = std::pair; _Val = std::pair, std::pair >; _KeyOfValue = std::_Select1st, std::pair > >; _Compare = std::less >; _Alloc = std::allocator, std::pair > >]’: 2019-11-23T00:59:17 /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, std::pair >, std::_Select1st, std::pair > >, std::less >, std::allocator, std::pair > > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, std::pair > >’} changed in GCC 7.1 2019-11-23T00:59:17 In file included from /usr/include/c++/8/map:61, 2019-11-23T00:59:17 from MorseComplex.h:4, 2019-11-23T00:59:17 from MorseComplex.cpp:1: 2019-11-23T00:59:17 /usr/include/c++/8/bits/stl_map.h: In member function ‘int MorseComplex::MaxLabel(int, T) [with T = double]’: 2019-11-23T00:59:17 /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree >, std::_Select1st > >, std::less, std::allocator > > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator > >’} changed in GCC 7.1 2019-11-23T00:59:17 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2019-11-23T00:59:17 /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree >, std::_Select1st > >, std::less, std::allocator > > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator > >’} changed in GCC 7.1 2019-11-23T00:59:17 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2019-11-23T00:59:17 /usr/include/c++/8/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = int; _Tp = Merge; _Compare = std::less; _Alloc = std::allocator > >]’: 2019-11-23T00:59:17 /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree >, std::_Select1st > >, std::less, std::allocator > > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator > >’} changed in GCC 7.1 2019-11-23T00:59:17 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2019-11-23T00:59:18 /usr/include/c++/8/bits/stl_map.h: In member function ‘std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = std::pair; _Tp = std::pair; _Compare = std::less >; _Alloc = std::allocator, std::pair > >]’: 2019-11-23T00:59:18 /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, std::pair >, std::_Select1st, std::pair > >, std::less >, std::allocator, std::pair > > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, std::pair > >’} changed in GCC 7.1 2019-11-23T00:59:18 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2019-11-23T00:59:18 In file included from /usr/include/c++/8/algorithm:62, 2019-11-23T00:59:18 from MorseComplex.cpp:5: 2019-11-23T00:59:18 /usr/include/c++/8/bits/stl_algo.h: In member function ‘std::vector MorseComplex::SortedPersistences() [with T = double]’: 2019-11-23T00:59:18 /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 2019-11-23T00:59:18 std::__introsort_loop(__first, __last, 2019-11-23T00:59:18 ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 2019-11-23T00:59:18 std::__lg(__last - __first) * 2, 2019-11-23T00:59:18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2019-11-23T00:59:18 __comp); 2019-11-23T00:59:18 ~~~~~~~ 2019-11-23T00:59:18 /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 2019-11-23T00:59:18 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); 2019-11-23T00:59:18 ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2019-11-23T00:59:18 /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 2019-11-23T00:59:18 std::__insertion_sort(__first, __last, __comp); 2019-11-23T00:59:18 ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ 2019-11-23T00:59:18 In file included from /usr/include/c++/8/map:61, 2019-11-23T00:59:18 from MorseComplex.h:4, 2019-11-23T00:59:18 from MorseComplex.cpp:1: 2019-11-23T00:59:18 /usr/include/c++/8/bits/stl_map.h: In member function ‘std::map > MorseComplex::GetPartitions(T) [with T = double]’: 2019-11-23T00:59:18 /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree >, std::_Select1st > >, std::less, std::allocator > > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator > >’} changed in GCC 7.1 2019-11-23T00:59:18 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2019-11-23T00:59:18 /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree >, std::_Select1st > >, std::less, std::allocator > > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator > >’} changed in GCC 7.1 2019-11-23T00:59:18 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2019-11-23T00:59:18 /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree >, std::_Select1st > >, std::less, std::allocator > > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator > >’} changed in GCC 7.1 2019-11-23T00:59:18 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2019-11-23T00:59:22 In file included from /usr/include/c++/8/map:60, 2019-11-23T00:59:22 from MorseComplex.h:4, 2019-11-23T00:59:22 from MorseComplex.cpp:1: 2019-11-23T00:59:22 /usr/include/c++/8/bits/stl_tree.h: In member function ‘std::pair std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = std::pair; _Val = std::pair, std::pair >; _KeyOfValue = std::_Select1st, std::pair > >; _Compare = std::less >; _Alloc = std::allocator, std::pair > >]’: 2019-11-23T00:59:22 /usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, std::pair >, std::_Select1st, std::pair > >, std::less >, std::allocator, std::pair > > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, std::pair > >’} changed in GCC 7.1 2019-11-23T00:59:22 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: 2019-11-23T00:59:22 ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2019-11-23T00:59:22 In file included from /usr/include/c++/8/map:61, 2019-11-23T00:59:22 from MorseComplex.h:4, 2019-11-23T00:59:22 from MorseComplex.cpp:1: 2019-11-23T00:59:22 /usr/include/c++/8/bits/stl_map.h: In member function ‘void MorseComplex::ComputeMaximaPersistence() [with T = double]’: 2019-11-23T00:59:22 /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree >, std::_Select1st > >, std::less, std::allocator > > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator > >’} changed in GCC 7.1 2019-11-23T00:59:22 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2019-11-23T00:59:22 /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree >, std::_Select1st > >, std::less, std::allocator > > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator > >’} changed in GCC 7.1 2019-11-23T00:59:22 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2019-11-23T00:59:22 /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, std::pair >, std::_Select1st, std::pair > >, std::less >, std::allocator, std::pair > > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator, std::pair > >’} changed in GCC 7.1 2019-11-23T00:59:22 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2019-11-23T00:59:22 /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree >, std::_Select1st > >, std::less, std::allocator > > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator > >’} changed in GCC 7.1 2019-11-23T00:59:22 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2019-11-23T00:59:22 /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type ‘std::_Rb_tree >, std::_Select1st > >, std::less, std::allocator > > >::const_iterator’ {aka ‘std::_Rb_tree_const_iterator > >’} changed in GCC 7.1 2019-11-23T00:59:22 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2019-11-23T00:59:33 arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.7m -c utils.cpp -o build/temp.linux-armv7l-3.7/utils.o -O3 -march=native 2019-11-23T00:59:35 arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.7m -c topology_wrap.cpp -o build/temp.linux-armv7l-3.7/topology_wrap.o -O3 -march=native 2019-11-23T01:00:07 In file included from /usr/include/c++/8/vector:69, 2019-11-23T01:00:07 from topology_wrap.cpp:3321: 2019-11-23T01:00:07 /usr/include/c++/8/bits/vector.tcc: In function ‘void std::vector<_Tp, _Alloc>::_M_range_insert(std::vector<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator > >; _Tp = double; _Alloc = std::allocator]’: 2019-11-23T01:00:07 /usr/include/c++/8/bits/vector.tcc:672:7: note: parameter passing for argument of type ‘std::vector >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > >’} changed in GCC 7.1 2019-11-23T01:00:07 vector<_Tp, _Alloc>:: 2019-11-23T01:00:07 ^~~~~~~~~~~~~~~~~~~ 2019-11-23T01:00:07 /usr/include/c++/8/bits/vector.tcc:672:7: note: parameter passing for argument of type ‘std::vector >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > >’} changed in GCC 7.1 2019-11-23T01:00:07 /usr/include/c++/8/bits/vector.tcc:672:7: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 2019-11-23T01:00:07 /usr/include/c++/8/bits/vector.tcc:672:7: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 2019-11-23T01:00:07 /usr/include/c++/8/bits/vector.tcc:672:7: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 2019-11-23T01:00:28 In file included from /usr/include/c++/8/vector:64, 2019-11-23T01:00:28 from topology_wrap.cpp:3321: 2019-11-23T01:00:28 /usr/include/c++/8/bits/stl_vector.h: In function ‘void swig::setslice(Sequence*, Difference, Difference, Py_ssize_t, const InputSeq&) [with Sequence = std::vector >; Difference = int; InputSeq = std::vector >]’: 2019-11-23T01:00:28 /usr/include/c++/8/bits/stl_vector.h:1549:4: note: parameter passing for argument of type ‘std::vector >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > >’} changed in GCC 7.1 2019-11-23T01:00:28 _M_range_insert(__pos, __first, __last, 2019-11-23T01:00:28 ^~~~~~~~~~~~~~~ 2019-11-23T01:00:28 /usr/include/c++/8/bits/stl_vector.h:1549:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 2019-11-23T01:00:29 /usr/include/c++/8/bits/stl_vector.h: In function ‘void swig::setslice(Sequence*, Difference, Difference, Py_ssize_t, const InputSeq&) [with Sequence = std::vector >; Difference = int; InputSeq = std::vector >]’: 2019-11-23T01:00:29 /usr/include/c++/8/bits/stl_vector.h:1549:4: note: parameter passing for argument of type ‘std::vector >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > >’} changed in GCC 7.1 2019-11-23T01:00:29 _M_range_insert(__pos, __first, __last, 2019-11-23T01:00:29 ^~~~~~~~~~~~~~~ 2019-11-23T01:00:29 /usr/include/c++/8/bits/stl_vector.h:1549:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 2019-11-23T01:00:31 In file included from /usr/include/c++/8/vector:69, 2019-11-23T01:00:31 from topology_wrap.cpp:3321: 2019-11-23T01:00:31 /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]’: 2019-11-23T01:00:31 /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > >’} changed in GCC 7.1 2019-11-23T01:00:31 vector<_Tp, _Alloc>:: 2019-11-23T01:00:31 ^~~~~~~~~~~~~~~~~~~ 2019-11-23T01:00:31 In file included from /usr/include/c++/8/vector:64, 2019-11-23T01:00:31 from topology_wrap.cpp:3321: 2019-11-23T01:00:31 /usr/include/c++/8/bits/stl_vector.h: In function ‘PyObject* _wrap_vectorDouble_append(PyObject*, PyObject*)’: 2019-11-23T01:00:31 /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 2019-11-23T01:00:31 _M_realloc_insert(end(), __x); 2019-11-23T01:00:31 ^~~~~~~~~~~~~~~~~ 2019-11-23T01:00:31 /usr/include/c++/8/bits/stl_vector.h: In function ‘Sequence* swig::getslice(const Sequence*, Difference, Difference, Py_ssize_t) [with Sequence = std::vector >; Difference = int]’: 2019-11-23T01:00:31 /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 2019-11-23T01:00:31 _M_realloc_insert(end(), __x); 2019-11-23T01:00:31 ^~~~~~~~~~~~~~~~~ 2019-11-23T01:00:31 /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 2019-11-23T01:00:31 _M_realloc_insert(end(), __x); 2019-11-23T01:00:31 ^~~~~~~~~~~~~~~~~ 2019-11-23T01:00:31 /usr/include/c++/8/bits/stl_vector.h: In function ‘PyObject* _wrap_vectorDouble_push_back(PyObject*, PyObject*)’: 2019-11-23T01:00:31 /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 2019-11-23T01:00:31 _M_realloc_insert(end(), __x); 2019-11-23T01:00:31 ^~~~~~~~~~~~~~~~~ 2019-11-23T01:00:31 In file included from /usr/include/c++/8/vector:69, 2019-11-23T01:00:31 from topology_wrap.cpp:3321: 2019-11-23T01:00:31 /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator]’: 2019-11-23T01:00:31 /usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type ‘std::vector >::iterator’ {aka ‘__gnu_cxx::__normal_iterator > >’} changed in GCC 7.1 2019-11-23T01:00:31 vector<_Tp, _Alloc>:: 2019-11-23T01:00:31 ^~~~~~~~~~~~~~~~~~~ 2019-11-23T01:00:46 /usr/include/c++/8/bits/vector.tcc: In function ‘PyObject* _wrap_vectorDouble_insert(PyObject*, PyObject*)’: 2019-11-23T01:00:46 /usr/include/c++/8/bits/vector.tcc:149:2: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 2019-11-23T01:00:46 _M_realloc_insert(begin() + (__position - cbegin()), __x); 2019-11-23T01:00:46 ^~~~~~~~~~~~~~~~~ 2019-11-23T01:00:46 In file included from /usr/include/c++/8/vector:64, 2019-11-23T01:00:46 from topology_wrap.cpp:3321: 2019-11-23T01:00:46 /usr/include/c++/8/bits/stl_vector.h:1225:2: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 2019-11-23T01:00:46 _M_fill_insert(begin() + __offset, __n, __x); 2019-11-23T01:00:46 ^~~~~~~~~~~~~~ 2019-11-23T01:00:47 /usr/include/c++/8/bits/stl_vector.h: In function ‘PyObject* _wrap_vectorDouble_resize(PyObject*, PyObject*)’: 2019-11-23T01:00:47 /usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator > >’ changed in GCC 7.1 2019-11-23T01:00:47 _M_fill_insert(end(), __new_size - size(), __x); 2019-11-23T01:00:47 ^~~~~~~~~~~~~~ 2019-11-23T01:01:22 arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.7/UnionFind.o build/temp.linux-armv7l-3.7/MergeTree.o build/temp.linux-armv7l-3.7/MorseComplex.o build/temp.linux-armv7l-3.7/utils.o build/temp.linux-armv7l-3.7/topology_wrap.o -o build/lib.linux-armv7l-3.7/_topology.cpython-37m-arm-linux-gnueabihf.so 2019-11-23T01:01:24 installing to build/bdist.linux-armv7l/wheel 2019-11-23T01:01:24 running install 2019-11-23T01:01:24 running install_lib 2019-11-23T01:01:24 creating build/bdist.linux-armv7l 2019-11-23T01:01:24 creating build/bdist.linux-armv7l/wheel 2019-11-23T01:01:24 creating build/bdist.linux-armv7l/wheel/topopy 2019-11-23T01:01:24 copying build/lib.linux-armv7l-3.7/topopy/MergeTree.py -> build/bdist.linux-armv7l/wheel/topopy 2019-11-23T01:01:24 copying build/lib.linux-armv7l-3.7/topopy/TopologicalObject.py -> build/bdist.linux-armv7l/wheel/topopy 2019-11-23T01:01:24 copying build/lib.linux-armv7l-3.7/topopy/topology.py -> build/bdist.linux-armv7l/wheel/topopy 2019-11-23T01:01:24 copying build/lib.linux-armv7l-3.7/topopy/MorseSmaleComplex.py -> build/bdist.linux-armv7l/wheel/topopy 2019-11-23T01:01:24 copying build/lib.linux-armv7l-3.7/topopy/__init__.py -> build/bdist.linux-armv7l/wheel/topopy 2019-11-23T01:01:24 copying build/lib.linux-armv7l-3.7/topopy/ContourTree.py -> build/bdist.linux-armv7l/wheel/topopy 2019-11-23T01:01:24 copying build/lib.linux-armv7l-3.7/topopy/MorseComplex.py -> build/bdist.linux-armv7l/wheel/topopy 2019-11-23T01:01:24 copying build/lib.linux-armv7l-3.7/_topology.cpython-37m-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel 2019-11-23T01:01:25 running install_egg_info 2019-11-23T01:01:25 running egg_info 2019-11-23T01:01:25 writing topopy.egg-info/PKG-INFO 2019-11-23T01:01:25 writing dependency_links to topopy.egg-info/dependency_links.txt 2019-11-23T01:01:25 writing requirements to topopy.egg-info/requires.txt 2019-11-23T01:01:25 writing top-level names to topopy.egg-info/top_level.txt 2019-11-23T01:01:25 reading manifest file 'topopy.egg-info/SOURCES.txt' 2019-11-23T01:01:25 reading manifest template 'MANIFEST.in' 2019-11-23T01:01:25 writing manifest file 'topopy.egg-info/SOURCES.txt' 2019-11-23T01:01:25 Copying topopy.egg-info to build/bdist.linux-armv7l/wheel/topopy-1.0.0.dev4639326-py3.7.egg-info 2019-11-23T01:01:25 running install_scripts 2019-11-23T01:01:25 adding license file "LICENSE" (matched pattern "LICEN[CS]E*") 2019-11-23T01:01:25 creating build/bdist.linux-armv7l/wheel/topopy-1.0.0.dev4639326.dist-info/WHEEL 2019-11-23T01:01:25 creating '/tmp/pip-wheel-xvxl0_ed/topopy-1.0.0.dev4639326-cp37-cp37m-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2019-11-23T01:01:27 adding '_topology.cpython-37m-arm-linux-gnueabihf.so' 2019-11-23T01:01:27 adding 'topopy/ContourTree.py' 2019-11-23T01:01:27 adding 'topopy/MergeTree.py' 2019-11-23T01:01:27 adding 'topopy/MorseComplex.py' 2019-11-23T01:01:27 adding 'topopy/MorseSmaleComplex.py' 2019-11-23T01:01:27 adding 'topopy/TopologicalObject.py' 2019-11-23T01:01:27 adding 'topopy/__init__.py' 2019-11-23T01:01:27 adding 'topopy/topology.py' 2019-11-23T01:01:27 adding 'topopy-1.0.0.dev4639326.dist-info/LICENSE' 2019-11-23T01:01:27 adding 'topopy-1.0.0.dev4639326.dist-info/METADATA' 2019-11-23T01:01:27 adding 'topopy-1.0.0.dev4639326.dist-info/WHEEL' 2019-11-23T01:01:27 adding 'topopy-1.0.0.dev4639326.dist-info/top_level.txt' 2019-11-23T01:01:27 adding 'topopy-1.0.0.dev4639326.dist-info/RECORD' 2019-11-23T01:01:27 removing build/bdist.linux-armv7l/wheel 2019-11-23T01:01:27 Building wheel for topopy (setup.py): finished with status 'done' 2019-11-23T01:01:27 Stored in directory: /tmp/tmpishdtm6m 2019-11-23T01:01:27 Successfully built topopy 2019-11-23T01:01:27 Cleaning up... 2019-11-23T01:01:27 Removing source in /tmp/pip-wheel-zmial2ns/topopy 2019-11-23T01:01:27 Removed build tracker '/tmp/pip-req-tracker-6g6ohbc_'