2019-12-07T20:14:39 Created temporary directory: /tmp/pip-ephem-wheel-cache-krh66qr_
2019-12-07T20:14:39 Created temporary directory: /tmp/pip-req-tracker-yqbtxgic
2019-12-07T20:14:39 Created requirements tracker '/tmp/pip-req-tracker-yqbtxgic'
2019-12-07T20:14:39 Created temporary directory: /tmp/pip-wheel-54wb2cbo
2019-12-07T20:14:39 Collecting sequana-variant-calling==0.8.7
2019-12-07T20:14:39   1 location(s) to search for versions of sequana-variant-calling:
2019-12-07T20:14:39   * https://pypi.org/simple/sequana-variant-calling/
2019-12-07T20:14:39   Getting page https://pypi.org/simple/sequana-variant-calling/
2019-12-07T20:14:40   Analyzing links from page https://pypi.org/simple/sequana-variant-calling/
2019-12-07T20:14:40     Skipping link https://files.pythonhosted.org/packages/8a/df/c893a08b471c537ca9941a06b711d924b5b4b10b7321128c43d940f1a3fb/sequana_variant_calling-0.8.0-py3.5.egg#sha256=b5e4b94665fd38050217d472b5f94cb3dfec255a558ed5b079b91297ed5488f1 (from https://pypi.org/simple/sequana-variant-calling/); unsupported archive format: .egg
2019-12-07T20:14:40     Skipping link https://files.pythonhosted.org/packages/a5/3e/63014a9792a51a23e198e0574e32da60d8e615ac877752463ed4f5f1e147/sequana_variant_calling-0.8.1-py3.5.egg#sha256=1970e6a10c0ee8226300cb95df20e40c40ba06a6fd40f6548695779ee854909f (from https://pypi.org/simple/sequana-variant-calling/); unsupported archive format: .egg
2019-12-07T20:14:40     Skipping link https://files.pythonhosted.org/packages/30/e7/2e7052bff8e49aea35fc674af929e40b0a683f353958da50ac9133c9a1fe/sequana_variant_calling-0.8.2-py3.5.egg#sha256=db149aff23bfd974a46e2313b5ecf76a1d79c73820c71a584685e114c70156ca (from https://pypi.org/simple/sequana-variant-calling/); unsupported archive format: .egg
2019-12-07T20:14:40     Skipping link https://files.pythonhosted.org/packages/42/3f/b11c629fbd7ed8937b1c827db65017aa348fd3073c2a6aee048ddef7630b/sequana_variant_calling-0.8.3-py3.5.egg#sha256=fc7c209f8e56119239012fef93e6680e2476a14cdbce0d4e2c0171979403672f (from https://pypi.org/simple/sequana-variant-calling/); unsupported archive format: .egg
2019-12-07T20:14:40     Skipping link https://files.pythonhosted.org/packages/af/79/456b5c7ee7867d8e92821c7011a365b183806a2a350b8a4abfcaa73d0186/sequana_variant_calling-0.8.4-py3.5.egg#sha256=a344995706606ab545c2b44965c1ec54c3b3783a013b37f986ba5b3ec70c7b7a (from https://pypi.org/simple/sequana-variant-calling/); unsupported archive format: .egg
2019-12-07T20:14:40     Found link https://files.pythonhosted.org/packages/c3/9b/107b8e187a492fbd3b9f95917cc57f2bc668409a7764acffaa2c59a00faf/sequana_variant_calling-0.8.4.tar.gz#sha256=ce0da3328ffbecdee7c57d16fbfb5b51b583187c5367abe602cd1b4c62bb0628 (from https://pypi.org/simple/sequana-variant-calling/), version: 0.8.4
2019-12-07T20:14:40     Found link https://files.pythonhosted.org/packages/25/6a/02aab9a14bbb62abdb5551bfbe7ca41c09417d5be35de222e2331c2f4012/sequana_variant_calling-0.8.5.tar.gz#sha256=79042eb9177904d69d68201907d554bb17707363c58fdde29f3bc4bdecb3e279 (from https://pypi.org/simple/sequana-variant-calling/), version: 0.8.5
2019-12-07T20:14:40     Found link https://files.pythonhosted.org/packages/9b/f2/1916ac0d90c12613e26047cbd2677f8da6dc7b2d258dd7cf7eaccd825c05/sequana_variant_calling-0.8.6.tar.gz#sha256=bbb4167da2cb30c729e173a97823bba0d03b3c53f8ca58ac4de1d2c3b8f89b55 (from https://pypi.org/simple/sequana-variant-calling/), version: 0.8.6
2019-12-07T20:14:40     Found link https://files.pythonhosted.org/packages/56/ce/2a87ecefe2f090fbd5810d65735882148fa49dcd5317795e7dae3c9c16a5/sequana_variant_calling-0.8.7.tar.gz#sha256=2ceffd1764ee7582a2716bf19aff802e8d31f6ffbfbde970f0a4d4898824c50b (from https://pypi.org/simple/sequana-variant-calling/), version: 0.8.7
2019-12-07T20:14:40   Using version 0.8.7 (newest of versions: 0.8.7)
2019-12-07T20:14:40   Created temporary directory: /tmp/pip-unpack-p4lfbxln
2019-12-07T20:14:40   Downloading https://files.pythonhosted.org/packages/56/ce/2a87ecefe2f090fbd5810d65735882148fa49dcd5317795e7dae3c9c16a5/sequana_variant_calling-0.8.7.tar.gz (330kB)
2019-12-07T20:14:40   Downloading from URL https://files.pythonhosted.org/packages/56/ce/2a87ecefe2f090fbd5810d65735882148fa49dcd5317795e7dae3c9c16a5/sequana_variant_calling-0.8.7.tar.gz#sha256=2ceffd1764ee7582a2716bf19aff802e8d31f6ffbfbde970f0a4d4898824c50b (from https://pypi.org/simple/sequana-variant-calling/)
2019-12-07T20:14:40   Added sequana-variant-calling==0.8.7 from https://files.pythonhosted.org/packages/56/ce/2a87ecefe2f090fbd5810d65735882148fa49dcd5317795e7dae3c9c16a5/sequana_variant_calling-0.8.7.tar.gz#sha256=2ceffd1764ee7582a2716bf19aff802e8d31f6ffbfbde970f0a4d4898824c50b to build tracker '/tmp/pip-req-tracker-yqbtxgic'
2019-12-07T20:14:40     Running setup.py (path:/tmp/pip-wheel-54wb2cbo/sequana-variant-calling/setup.py) egg_info for package sequana-variant-calling
2019-12-07T20:14:40     Running command python setup.py egg_info
2019-12-07T20:14:42     running egg_info
2019-12-07T20:14:42     creating pip-egg-info/sequana_variant_calling.egg-info
2019-12-07T20:14:42     writing dependency_links to pip-egg-info/sequana_variant_calling.egg-info/dependency_links.txt
2019-12-07T20:14:42     writing top-level names to pip-egg-info/sequana_variant_calling.egg-info/top_level.txt
2019-12-07T20:14:42     writing pip-egg-info/sequana_variant_calling.egg-info/PKG-INFO
2019-12-07T20:14:42     writing entry points to pip-egg-info/sequana_variant_calling.egg-info/entry_points.txt
2019-12-07T20:14:42     writing requirements to pip-egg-info/sequana_variant_calling.egg-info/requires.txt
2019-12-07T20:14:42     writing manifest file 'pip-egg-info/sequana_variant_calling.egg-info/SOURCES.txt'
2019-12-07T20:14:43     reading manifest file 'pip-egg-info/sequana_variant_calling.egg-info/SOURCES.txt'
2019-12-07T20:14:43     writing manifest file 'pip-egg-info/sequana_variant_calling.egg-info/SOURCES.txt'
2019-12-07T20:14:43   Source in /tmp/pip-wheel-54wb2cbo/sequana-variant-calling has version 0.8.7, which satisfies requirement sequana-variant-calling==0.8.7 from https://files.pythonhosted.org/packages/56/ce/2a87ecefe2f090fbd5810d65735882148fa49dcd5317795e7dae3c9c16a5/sequana_variant_calling-0.8.7.tar.gz#sha256=2ceffd1764ee7582a2716bf19aff802e8d31f6ffbfbde970f0a4d4898824c50b
2019-12-07T20:14:43   Removed sequana-variant-calling==0.8.7 from https://files.pythonhosted.org/packages/56/ce/2a87ecefe2f090fbd5810d65735882148fa49dcd5317795e7dae3c9c16a5/sequana_variant_calling-0.8.7.tar.gz#sha256=2ceffd1764ee7582a2716bf19aff802e8d31f6ffbfbde970f0a4d4898824c50b from build tracker '/tmp/pip-req-tracker-yqbtxgic'
2019-12-07T20:14:43 Building wheels for collected packages: sequana-variant-calling
2019-12-07T20:14:43   Created temporary directory: /tmp/pip-wheel-oa9ei0yk
2019-12-07T20:14:43   Building wheel for sequana-variant-calling (setup.py): started
2019-12-07T20:14:43   Destination directory: /tmp/pip-wheel-oa9ei0yk
2019-12-07T20:14:43   Running command /usr/bin/python3 -u -c 'import setuptools, tokenize;__file__='"'"'/tmp/pip-wheel-54wb2cbo/sequana-variant-calling/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-oa9ei0yk
2019-12-07T20:14:45   running bdist_wheel
2019-12-07T20:14:45   running build
2019-12-07T20:14:45   running build_py
2019-12-07T20:14:45   creating build
2019-12-07T20:14:45   creating build/lib
2019-12-07T20:14:45   creating build/lib/sequana_pipelines
2019-12-07T20:14:45   creating build/lib/sequana_pipelines/variant_calling
2019-12-07T20:14:45   copying sequana_pipelines/variant_calling/main.py -> build/lib/sequana_pipelines/variant_calling
2019-12-07T20:14:45   copying sequana_pipelines/variant_calling/__init__.py -> build/lib/sequana_pipelines/variant_calling
2019-12-07T20:14:45   creating build/lib/sequana_pipelines/variant_calling/data
2019-12-07T20:14:45   copying sequana_pipelines/variant_calling/data/__init__.py -> build/lib/sequana_pipelines/variant_calling/data
2019-12-07T20:14:45   copying sequana_pipelines/variant_calling/config.yaml -> build/lib/sequana_pipelines/variant_calling
2019-12-07T20:14:45   copying sequana_pipelines/variant_calling/variant_calling.rules -> build/lib/sequana_pipelines/variant_calling
2019-12-07T20:14:45   copying sequana_pipelines/variant_calling/requirements.txt -> build/lib/sequana_pipelines/variant_calling
2019-12-07T20:14:45   copying sequana_pipelines/variant_calling/dag.png -> build/lib/sequana_pipelines/variant_calling
2019-12-07T20:14:45   installing to build/bdist.linux-armv7l/wheel
2019-12-07T20:14:45   running install
2019-12-07T20:14:45   running install_lib
2019-12-07T20:14:45   creating build/bdist.linux-armv7l
2019-12-07T20:14:45   creating build/bdist.linux-armv7l/wheel
2019-12-07T20:14:45   creating build/bdist.linux-armv7l/wheel/sequana_pipelines
2019-12-07T20:14:45   creating build/bdist.linux-armv7l/wheel/sequana_pipelines/variant_calling
2019-12-07T20:14:45   copying build/lib/sequana_pipelines/variant_calling/requirements.txt -> build/bdist.linux-armv7l/wheel/sequana_pipelines/variant_calling
2019-12-07T20:14:45   copying build/lib/sequana_pipelines/variant_calling/dag.png -> build/bdist.linux-armv7l/wheel/sequana_pipelines/variant_calling
2019-12-07T20:14:45   copying build/lib/sequana_pipelines/variant_calling/config.yaml -> build/bdist.linux-armv7l/wheel/sequana_pipelines/variant_calling
2019-12-07T20:14:45   copying build/lib/sequana_pipelines/variant_calling/main.py -> build/bdist.linux-armv7l/wheel/sequana_pipelines/variant_calling
2019-12-07T20:14:45   creating build/bdist.linux-armv7l/wheel/sequana_pipelines/variant_calling/data
2019-12-07T20:14:45   copying build/lib/sequana_pipelines/variant_calling/data/__init__.py -> build/bdist.linux-armv7l/wheel/sequana_pipelines/variant_calling/data
2019-12-07T20:14:45   copying build/lib/sequana_pipelines/variant_calling/variant_calling.rules -> build/bdist.linux-armv7l/wheel/sequana_pipelines/variant_calling
2019-12-07T20:14:45   copying build/lib/sequana_pipelines/variant_calling/__init__.py -> build/bdist.linux-armv7l/wheel/sequana_pipelines/variant_calling
2019-12-07T20:14:45   running install_egg_info
2019-12-07T20:14:45   running egg_info
2019-12-07T20:14:45   writing top-level names to sequana_variant_calling.egg-info/top_level.txt
2019-12-07T20:14:45   writing sequana_variant_calling.egg-info/PKG-INFO
2019-12-07T20:14:45   writing requirements to sequana_variant_calling.egg-info/requires.txt
2019-12-07T20:14:45   writing dependency_links to sequana_variant_calling.egg-info/dependency_links.txt
2019-12-07T20:14:45   writing entry points to sequana_variant_calling.egg-info/entry_points.txt
2019-12-07T20:14:45   reading manifest file 'sequana_variant_calling.egg-info/SOURCES.txt'
2019-12-07T20:14:45   writing manifest file 'sequana_variant_calling.egg-info/SOURCES.txt'
2019-12-07T20:14:45   Copying sequana_variant_calling.egg-info to build/bdist.linux-armv7l/wheel/sequana_variant_calling-0.8.7-py3.5.egg-info
2019-12-07T20:14:45   running install_scripts
2019-12-07T20:14:46   creating build/bdist.linux-armv7l/wheel/sequana_variant_calling-0.8.7.dist-info/WHEEL
2019-12-07T20:14:46   Building wheel for sequana-variant-calling (setup.py): finished with status 'done'
2019-12-07T20:14:46   Stored in directory: /tmp/tmptt8mja6h
2019-12-07T20:14:46 Successfully built sequana-variant-calling
2019-12-07T20:14:46 Cleaning up...
2019-12-07T20:14:46   Removing source in /tmp/pip-wheel-54wb2cbo/sequana-variant-calling
2019-12-07T20:14:46 Removed build tracker '/tmp/pip-req-tracker-yqbtxgic'