2019-12-11T17:48:01 Created temporary directory: /tmp/pip-ephem-wheel-cache-4aixvl5n 2019-12-11T17:48:01 Created temporary directory: /tmp/pip-req-tracker-cx2dgxdq 2019-12-11T17:48:01 Created requirements tracker '/tmp/pip-req-tracker-cx2dgxdq' 2019-12-11T17:48:01 Created temporary directory: /tmp/pip-wheel-9lwf448v 2019-12-11T17:48:01 Collecting dadi==2.0.4 2019-12-11T17:48:01 1 location(s) to search for versions of dadi: 2019-12-11T17:48:01 * https://pypi.org/simple/dadi/ 2019-12-11T17:48:01 Getting page https://pypi.org/simple/dadi/ 2019-12-11T17:48:01 Analyzing links from page https://pypi.org/simple/dadi/ 2019-12-11T17:48:01 Skipping link https://files.pythonhosted.org/packages/a0/90/3c79d2526f0a8d618db53d12845c82e0c4da4d26e8cf3180a7d7074f348a/dadi-1.9.92-cp37-cp37m-macosx_10_7_x86_64.whl#sha256=f512d91bb45eaa4463ef9d8b7e3391d9d5292428f2179e73d0859d319e444a9c (from https://pypi.org/simple/dadi/); it is not compatible with this Python 2019-12-11T17:48:01 Found link https://files.pythonhosted.org/packages/41/b7/79564b96938451691e1505554798f4d62748ea25d64bf589e883455938da/dadi-1.9.92.tar.gz#sha256=c842ed5641b46d5d0ba5a5f3a7bc0ab7a588324e376ecc0743514448eb080611 (from https://pypi.org/simple/dadi/), version: 1.9.92 2019-12-11T17:48:01 Skipping link https://files.pythonhosted.org/packages/53/5e/fea903fd0c54bdd9d87e9d0a8e552204f4596bcbb40173d469742ac1ab6d/dadi-2.0.1-cp37-cp37m-macosx_10_7_x86_64.whl#sha256=80bd4d1a3157545b92a43840613d325d4e493e1a7df0154cc5572d4e6cda8a3b (from https://pypi.org/simple/dadi/); it is not compatible with this Python 2019-12-11T17:48:01 Found link https://files.pythonhosted.org/packages/06/94/dbf599959d8a04ea52c520414d1af185a8f57cd2c2be7181af97e927852a/dadi-2.0.1.tar.gz#sha256=a3bf1d780eb97bd3a9804c063e5a463ca8b7c9bb2a4bc21b23ef0b5192d67be3 (from https://pypi.org/simple/dadi/), version: 2.0.1 2019-12-11T17:48:01 Skipping link https://files.pythonhosted.org/packages/2e/b8/8b868a117552fde24a5d513e8673fa059bd106fc87c1bb8743b000cc343d/dadi-2.0.2-cp37-cp37m-macosx_10_7_x86_64.whl#sha256=de3bc70b1c95c750e641e0e1b05ce757bd8894b1ab61406483a6281144458b43 (from https://pypi.org/simple/dadi/); it is not compatible with this Python 2019-12-11T17:48:01 Found link https://files.pythonhosted.org/packages/05/3c/0679df7beac434aa1dfaae53ef4b1717d849dcc8b7eadf2ef0f42545f22c/dadi-2.0.2.tar.gz#sha256=91013eaca614600944254e8618e02de188461cb35d6a1fdf8133b2acd722803d (from https://pypi.org/simple/dadi/), version: 2.0.2 2019-12-11T17:48:01 Skipping link https://files.pythonhosted.org/packages/2b/87/9645c8580abd51d5be25532f7927e067020cf03871b5a1468c29849a72af/dadi-2.0.3-cp37-cp37m-macosx_10_7_x86_64.whl#sha256=bfb0af514aacae0da5be85f15cb562d851e44406dacb419770f59d16e28540a7 (from https://pypi.org/simple/dadi/); it is not compatible with this Python 2019-12-11T17:48:01 Found link https://files.pythonhosted.org/packages/20/43/6bb9b18f73e31701eeff2f69ca3964ea8ce483bd444ecb4c8bc3a20350f1/dadi-2.0.3.tar.gz#sha256=3c0259325ae9bdb803f310973d4624d0054e2afa9fae5a5d1fa6d31aaec637b7 (from https://pypi.org/simple/dadi/), version: 2.0.3 2019-12-11T17:48:01 Skipping link https://files.pythonhosted.org/packages/3b/59/aef8d0105a55ea7024c0fdae8b5d981bc02ae2dce6c962a3ab5c838c87ee/dadi-2.0.4-cp37-cp37m-macosx_10_7_x86_64.whl#sha256=0556c2f6d7f20e45ee485ee247661bf04f5613062bfa292d3e7e4625ebcd8571 (from https://pypi.org/simple/dadi/); it is not compatible with this Python 2019-12-11T17:48:01 Found link https://files.pythonhosted.org/packages/67/b8/da1c9fa1e38411f1bfb4ef1df6405ed8adbc26ccca9f3f084f248a91cb70/dadi-2.0.4.tar.gz#sha256=e50112a06678f795155e963caf4800936399b231bb7d063e735d26357ec6f645 (from https://pypi.org/simple/dadi/), version: 2.0.4 2019-12-11T17:48:01 Using version 2.0.4 (newest of versions: 2.0.4) 2019-12-11T17:48:01 Created temporary directory: /tmp/pip-unpack-6r6rp_b9 2019-12-11T17:48:01 Downloading https://files.pythonhosted.org/packages/67/b8/da1c9fa1e38411f1bfb4ef1df6405ed8adbc26ccca9f3f084f248a91cb70/dadi-2.0.4.tar.gz (2.5MB) 2019-12-11T17:48:01 Downloading from URL https://files.pythonhosted.org/packages/67/b8/da1c9fa1e38411f1bfb4ef1df6405ed8adbc26ccca9f3f084f248a91cb70/dadi-2.0.4.tar.gz#sha256=e50112a06678f795155e963caf4800936399b231bb7d063e735d26357ec6f645 (from https://pypi.org/simple/dadi/) 2019-12-11T17:48:03 Added dadi==2.0.4 from https://files.pythonhosted.org/packages/67/b8/da1c9fa1e38411f1bfb4ef1df6405ed8adbc26ccca9f3f084f248a91cb70/dadi-2.0.4.tar.gz#sha256=e50112a06678f795155e963caf4800936399b231bb7d063e735d26357ec6f645 to build tracker '/tmp/pip-req-tracker-cx2dgxdq' 2019-12-11T17:48:03 Running setup.py (path:/tmp/pip-wheel-9lwf448v/dadi/setup.py) egg_info for package dadi 2019-12-11T17:48:03 Running command python setup.py egg_info 2019-12-11T17:48:05 running egg_info 2019-12-11T17:48:05 running build_src 2019-12-11T17:48:05 build_src 2019-12-11T17:48:05 building extension "dadi.tridiag" sources 2019-12-11T17:48:05 creating build 2019-12-11T17:48:05 creating build/src.linux-armv7l-3.7 2019-12-11T17:48:05 creating build/src.linux-armv7l-3.7/dadi 2019-12-11T17:48:05 f2py options: [] 2019-12-11T17:48:05 f2py: dadi/tridiag.pyf 2019-12-11T17:48:06 Reading fortran codes... 2019-12-11T17:48:06 Reading file 'dadi/tridiag.pyf' (format:free) 2019-12-11T17:48:06 Line #5 in dadi/tridiag.pyf:" intent(c) " 2019-12-11T17:48:06 All arguments will have attribute intent(c) 2019-12-11T17:48:06 Line #15 in dadi/tridiag.pyf:" intent(c) " 2019-12-11T17:48:06 All arguments will have attribute intent(c) 2019-12-11T17:48:06 Post-processing... 2019-12-11T17:48:06 Block: tridiag 2019-12-11T17:48:06 Block: tridiag 2019-12-11T17:48:06 Block: tridiag_fl 2019-12-11T17:48:06 Post-processing (stage 2)... 2019-12-11T17:48:06 Building modules... 2019-12-11T17:48:06 Building module "tridiag"... 2019-12-11T17:48:06 Constructing wrapper function "tridiag"... 2019-12-11T17:48:06 u = tridiag(a,b,c,r) 2019-12-11T17:48:06 Constructing wrapper function "tridiag_fl"... 2019-12-11T17:48:06 u = tridiag_fl(a,b,c,r) 2019-12-11T17:48:06 Wrote C/API module "tridiag" to file "build/src.linux-armv7l-3.7/dadi/tridiagmodule.c" 2019-12-11T17:48:06 adding 'build/src.linux-armv7l-3.7/build/src.linux-armv7l-3.7/dadi/fortranobject.c' to sources. 2019-12-11T17:48:06 adding 'build/src.linux-armv7l-3.7/build/src.linux-armv7l-3.7/dadi' to include_dirs. 2019-12-11T17:48:06 creating build/src.linux-armv7l-3.7/build 2019-12-11T17:48:06 creating build/src.linux-armv7l-3.7/build/src.linux-armv7l-3.7 2019-12-11T17:48:06 creating build/src.linux-armv7l-3.7/build/src.linux-armv7l-3.7/dadi 2019-12-11T17:48:06 copying /usr/lib/python3/dist-packages/numpy/f2py/src/fortranobject.c -> build/src.linux-armv7l-3.7/build/src.linux-armv7l-3.7/dadi 2019-12-11T17:48:06 copying /usr/lib/python3/dist-packages/numpy/f2py/src/fortranobject.h -> build/src.linux-armv7l-3.7/build/src.linux-armv7l-3.7/dadi 2019-12-11T17:48:06 building extension "dadi.integration_c" sources 2019-12-11T17:48:06 f2py options: [] 2019-12-11T17:48:06 f2py: dadi/integration_c.pyf 2019-12-11T17:48:07 Reading fortran codes... 2019-12-11T17:48:07 Reading file 'dadi/integration_c.pyf' (format:free) 2019-12-11T17:48:07 Line #5 in dadi/integration_c.pyf:" intent(c) " 2019-12-11T17:48:07 All arguments will have attribute intent(c) 2019-12-11T17:48:07 Line #18 in dadi/integration_c.pyf:" intent(c) " 2019-12-11T17:48:07 All arguments will have attribute intent(c) 2019-12-11T17:48:07 Line #35 in dadi/integration_c.pyf:" intent(c) " 2019-12-11T17:48:07 All arguments will have attribute intent(c) 2019-12-11T17:48:07 Line #52 in dadi/integration_c.pyf:" intent(c) " 2019-12-11T17:48:07 All arguments will have attribute intent(c) 2019-12-11T17:48:07 Line #65 in dadi/integration_c.pyf:" intent(c) " 2019-12-11T17:48:07 All arguments will have attribute intent(c) 2019-12-11T17:48:07 Line #78 in dadi/integration_c.pyf:" intent(c) " 2019-12-11T17:48:07 All arguments will have attribute intent(c) 2019-12-11T17:48:07 Line #98 in dadi/integration_c.pyf:" intent(c) " 2019-12-11T17:48:07 All arguments will have attribute intent(c) 2019-12-11T17:48:07 Line #118 in dadi/integration_c.pyf:" intent(c) " 2019-12-11T17:48:07 All arguments will have attribute intent(c) 2019-12-11T17:48:07 Line #138 in dadi/integration_c.pyf:" intent(c) " 2019-12-11T17:48:07 All arguments will have attribute intent(c) 2019-12-11T17:48:07 Line #152 in dadi/integration_c.pyf:" intent(c) " 2019-12-11T17:48:07 All arguments will have attribute intent(c) 2019-12-11T17:48:07 Line #166 in dadi/integration_c.pyf:" intent(c) " 2019-12-11T17:48:07 All arguments will have attribute intent(c) 2019-12-11T17:48:07 Post-processing... 2019-12-11T17:48:07 Block: integration_c 2019-12-11T17:48:07 Block: implicit_1Dx 2019-12-11T17:48:07 Block: implicit_2Dx 2019-12-11T17:48:07 Block: implicit_2Dy 2019-12-11T17:48:07 Block: implicit_precalc_2Dx 2019-12-11T17:48:07 Block: implicit_precalc_2Dy 2019-12-11T17:48:07 Block: implicit_3Dx 2019-12-11T17:48:07 Block: implicit_3Dy 2019-12-11T17:48:07 Block: implicit_3Dz 2019-12-11T17:48:07 Block: implicit_precalc_3Dx 2019-12-11T17:48:07 Block: implicit_precalc_3Dy 2019-12-11T17:48:07 Block: implicit_precalc_3Dz 2019-12-11T17:48:07 Post-processing (stage 2)... 2019-12-11T17:48:07 Building modules... 2019-12-11T17:48:07 Building module "integration_c"... 2019-12-11T17:48:07 Constructing wrapper function "implicit_1Dx"... 2019-12-11T17:48:07 phi = implicit_1Dx(phi,xx,nu,gamma,h,beta,dt,use_delj_trick) 2019-12-11T17:48:07 Constructing wrapper function "implicit_2Dx"... 2019-12-11T17:48:07 phi = implicit_2Dx(phi,xx,yy,nu1,m12,gamma1,h1,dt,use_delj_trick,[Mstart,Mend]) 2019-12-11T17:48:07 Constructing wrapper function "implicit_2Dy"... 2019-12-11T17:48:07 phi = implicit_2Dy(phi,xx,yy,nu2,m21,gamma2,h2,dt,use_delj_trick,[Lstart,Lend]) 2019-12-11T17:48:07 Constructing wrapper function "implicit_precalc_2Dx"... 2019-12-11T17:48:07 phi = implicit_precalc_2Dx(phi,ax,bx,cx,dt,[Mstart,Mend]) 2019-12-11T17:48:07 Constructing wrapper function "implicit_precalc_2Dy"... 2019-12-11T17:48:07 phi = implicit_precalc_2Dy(phi,ay,by,cy,dt,[Lstart,Lend]) 2019-12-11T17:48:07 Constructing wrapper function "implicit_3Dx"... 2019-12-11T17:48:07 phi = implicit_3Dx(phi,xx,yy,zz,nu1,m12,m13,gamma1,h1,dt,use_delj_trick,[Mstart,Mend]) 2019-12-11T17:48:07 Constructing wrapper function "implicit_3Dy"... 2019-12-11T17:48:07 phi = implicit_3Dy(phi,xx,yy,zz,nu2,m21,m23,gamma2,h2,dt,use_delj_trick,[Lstart,Lend]) 2019-12-11T17:48:07 Constructing wrapper function "implicit_3Dz"... 2019-12-11T17:48:07 phi = implicit_3Dz(phi,xx,yy,zz,nu3,m31,m32,gamma3,h3,dt,use_delj_trick,[Lstart,Lend]) 2019-12-11T17:48:07 Constructing wrapper function "implicit_precalc_3Dx"... 2019-12-11T17:48:07 phi = implicit_precalc_3Dx(phi,ax,bx,cx,dt,[Mstart,Mend]) 2019-12-11T17:48:07 Constructing wrapper function "implicit_precalc_3Dy"... 2019-12-11T17:48:07 phi = implicit_precalc_3Dy(phi,ay,by,cy,dt,[Lstart,Lend]) 2019-12-11T17:48:07 Constructing wrapper function "implicit_precalc_3Dz"... 2019-12-11T17:48:07 phi = implicit_precalc_3Dz(phi,az,bz,cz,dt,[Lstart,Lend]) 2019-12-11T17:48:07 Wrote C/API module "integration_c" to file "build/src.linux-armv7l-3.7/dadi/integration_cmodule.c" 2019-12-11T17:48:07 adding 'build/src.linux-armv7l-3.7/build/src.linux-armv7l-3.7/dadi/fortranobject.c' to sources. 2019-12-11T17:48:07 adding 'build/src.linux-armv7l-3.7/build/src.linux-armv7l-3.7/dadi' to include_dirs. 2019-12-11T17:48:07 building extension "dadi.DFE.PDFs_c" sources 2019-12-11T17:48:07 creating build/src.linux-armv7l-3.7/dadi/DFE 2019-12-11T17:48:07 f2py options: [] 2019-12-11T17:48:07 f2py: dadi/DFE/PDFs.pyf 2019-12-11T17:48:07 Reading fortran codes... 2019-12-11T17:48:07 Reading file 'dadi/DFE/PDFs.pyf' (format:free) 2019-12-11T17:48:07 Line #5 in dadi/DFE/PDFs.pyf:" intent(c) " 2019-12-11T17:48:07 All arguments will have attribute intent(c) 2019-12-11T17:48:08 Line #16 in dadi/DFE/PDFs.pyf:" intent(c) " 2019-12-11T17:48:08 All arguments will have attribute intent(c) 2019-12-11T17:48:08 Line #22 in dadi/DFE/PDFs.pyf:" intent(c) " 2019-12-11T17:48:08 All arguments will have attribute intent(c) 2019-12-11T17:48:08 Post-processing... 2019-12-11T17:48:08 Block: PDFs_c 2019-12-11T17:48:08 Block: biv_lognormal 2019-12-11T17:48:08 Block: gamma_func 2019-12-11T17:48:08 Block: biv_ind_gamma 2019-12-11T17:48:08 Post-processing (stage 2)... 2019-12-11T17:48:08 Building modules... 2019-12-11T17:48:08 Building module "PDFs_c"... 2019-12-11T17:48:08 Constructing wrapper function "biv_lognormal"... 2019-12-11T17:48:08 output = biv_lognormal(xx,yy,params) 2019-12-11T17:48:08 Constructing wrapper function "gamma_func"... 2019-12-11T17:48:08 y = gamma_func(z) 2019-12-11T17:48:08 Constructing wrapper function "biv_ind_gamma"... 2019-12-11T17:48:08 output = biv_ind_gamma(xx,yy,params) 2019-12-11T17:48:08 Wrote C/API module "PDFs_c" to file "build/src.linux-armv7l-3.7/dadi/DFE/PDFs_cmodule.c" 2019-12-11T17:48:08 adding 'build/src.linux-armv7l-3.7/build/src.linux-armv7l-3.7/dadi/DFE/fortranobject.c' to sources. 2019-12-11T17:48:08 adding 'build/src.linux-armv7l-3.7/build/src.linux-armv7l-3.7/dadi/DFE' to include_dirs. 2019-12-11T17:48:08 creating build/src.linux-armv7l-3.7/build/src.linux-armv7l-3.7/dadi/DFE 2019-12-11T17:48:08 copying /usr/lib/python3/dist-packages/numpy/f2py/src/fortranobject.c -> build/src.linux-armv7l-3.7/build/src.linux-armv7l-3.7/dadi/DFE 2019-12-11T17:48:08 copying /usr/lib/python3/dist-packages/numpy/f2py/src/fortranobject.h -> build/src.linux-armv7l-3.7/build/src.linux-armv7l-3.7/dadi/DFE 2019-12-11T17:48:08 build_src: building npy-pkg config files 2019-12-11T17:48:08 creating pip-egg-info/dadi.egg-info 2019-12-11T17:48:08 writing pip-egg-info/dadi.egg-info/PKG-INFO 2019-12-11T17:48:08 writing dependency_links to pip-egg-info/dadi.egg-info/dependency_links.txt 2019-12-11T17:48:08 writing top-level names to pip-egg-info/dadi.egg-info/top_level.txt 2019-12-11T17:48:08 writing manifest file 'pip-egg-info/dadi.egg-info/SOURCES.txt' 2019-12-11T17:48:08 reading manifest file 'pip-egg-info/dadi.egg-info/SOURCES.txt' 2019-12-11T17:48:08 reading manifest template 'MANIFEST.in' 2019-12-11T17:48:08 warning: no previously-included files matching '*.msout' found anywhere in distribution 2019-12-11T17:48:08 warning: no previously-included files matching '*.swp' found anywhere in distribution 2019-12-11T17:48:08 warning: no previously-included files matching '*.pyc' found anywhere in distribution 2019-12-11T17:48:08 warning: no previously-included files matching 'seedms' found anywhere in distribution 2019-12-11T17:48:08 warning: no previously-included files matching '*.png' found anywhere in distribution 2019-12-11T17:48:08 warning: no previously-included files matching '*.bpkl' found anywhere in distribution 2019-12-11T17:48:08 warning: no previously-included files matching '*.npz' found anywhere in distribution 2019-12-11T17:48:08 writing manifest file 'pip-egg-info/dadi.egg-info/SOURCES.txt' 2019-12-11T17:48:08 appenddecl: "intent" not implemented. 2019-12-11T17:48:08 Source in /tmp/pip-wheel-9lwf448v/dadi has version 2.0.4, which satisfies requirement dadi==2.0.4 from https://files.pythonhosted.org/packages/67/b8/da1c9fa1e38411f1bfb4ef1df6405ed8adbc26ccca9f3f084f248a91cb70/dadi-2.0.4.tar.gz#sha256=e50112a06678f795155e963caf4800936399b231bb7d063e735d26357ec6f645 2019-12-11T17:48:08 Removed dadi==2.0.4 from https://files.pythonhosted.org/packages/67/b8/da1c9fa1e38411f1bfb4ef1df6405ed8adbc26ccca9f3f084f248a91cb70/dadi-2.0.4.tar.gz#sha256=e50112a06678f795155e963caf4800936399b231bb7d063e735d26357ec6f645 from build tracker '/tmp/pip-req-tracker-cx2dgxdq' 2019-12-11T17:48:08 Building wheels for collected packages: dadi 2019-12-11T17:48:08 Created temporary directory: /tmp/pip-wheel-uw_dnviu 2019-12-11T17:48:08 Building wheel for dadi (setup.py): started 2019-12-11T17:48:08 Destination directory: /tmp/pip-wheel-uw_dnviu 2019-12-11T17:48:08 Running command /usr/bin/python3 -u -c 'import setuptools, tokenize;__file__='"'"'/tmp/pip-wheel-9lwf448v/dadi/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-uw_dnviu 2019-12-11T17:48:10 running bdist_wheel 2019-12-11T17:48:10 running build 2019-12-11T17:48:10 running config_cc 2019-12-11T17:48:10 unifing config_cc, config, build_clib, build_ext, build commands --compiler options 2019-12-11T17:48:10 running config_fc 2019-12-11T17:48:10 unifing config_fc, config, build_clib, build_ext, build commands --fcompiler options 2019-12-11T17:48:10 running build_src 2019-12-11T17:48:10 build_src 2019-12-11T17:48:10 building extension "dadi.tridiag" sources 2019-12-11T17:48:10 f2py options: [] 2019-12-11T17:48:10 adding 'build/src.linux-armv7l-3.7/build/src.linux-armv7l-3.7/dadi/fortranobject.c' to sources. 2019-12-11T17:48:10 adding 'build/src.linux-armv7l-3.7/build/src.linux-armv7l-3.7/dadi' to include_dirs. 2019-12-11T17:48:10 building extension "dadi.integration_c" sources 2019-12-11T17:48:10 f2py options: [] 2019-12-11T17:48:10 adding 'build/src.linux-armv7l-3.7/build/src.linux-armv7l-3.7/dadi/fortranobject.c' to sources. 2019-12-11T17:48:10 adding 'build/src.linux-armv7l-3.7/build/src.linux-armv7l-3.7/dadi' to include_dirs. 2019-12-11T17:48:10 building extension "dadi.DFE.PDFs_c" sources 2019-12-11T17:48:10 f2py options: [] 2019-12-11T17:48:10 adding 'build/src.linux-armv7l-3.7/build/src.linux-armv7l-3.7/dadi/DFE/fortranobject.c' to sources. 2019-12-11T17:48:10 adding 'build/src.linux-armv7l-3.7/build/src.linux-armv7l-3.7/dadi/DFE' to include_dirs. 2019-12-11T17:48:10 build_src: building npy-pkg config files 2019-12-11T17:48:10 running build_py 2019-12-11T17:48:10 creating build/lib.linux-armv7l-3.7 2019-12-11T17:48:10 creating build/lib.linux-armv7l-3.7/dadi 2019-12-11T17:48:10 copying dadi/Misc.py -> build/lib.linux-armv7l-3.7/dadi 2019-12-11T17:48:10 copying dadi/Demographics2D.py -> build/lib.linux-armv7l-3.7/dadi 2019-12-11T17:48:10 copying dadi/Godambe.py -> build/lib.linux-armv7l-3.7/dadi 2019-12-11T17:48:10 copying dadi/Demographics1D.py -> build/lib.linux-armv7l-3.7/dadi 2019-12-11T17:48:10 copying dadi/Inference.py -> build/lib.linux-armv7l-3.7/dadi 2019-12-11T17:48:10 copying dadi/NLopt_mod.py -> build/lib.linux-armv7l-3.7/dadi 2019-12-11T17:48:10 copying dadi/Numerics.py -> build/lib.linux-armv7l-3.7/dadi 2019-12-11T17:48:10 copying dadi/PhiManip.py -> build/lib.linux-armv7l-3.7/dadi 2019-12-11T17:48:10 copying dadi/Spectrum_mod.py -> build/lib.linux-armv7l-3.7/dadi 2019-12-11T17:48:10 copying dadi/__init__.py -> build/lib.linux-armv7l-3.7/dadi 2019-12-11T17:48:10 copying dadi/Integration.py -> build/lib.linux-armv7l-3.7/dadi 2019-12-11T17:48:10 copying dadi/Plotting.py -> build/lib.linux-armv7l-3.7/dadi 2019-12-11T17:48:10 creating build/lib.linux-armv7l-3.7/dadi/DFE 2019-12-11T17:48:10 copying dadi/DFE/Cache1D_mod.py -> build/lib.linux-armv7l-3.7/dadi/DFE 2019-12-11T17:48:10 copying dadi/DFE/DemogSelModels.py -> build/lib.linux-armv7l-3.7/dadi/DFE 2019-12-11T17:48:10 copying dadi/DFE/PDFs.py -> build/lib.linux-armv7l-3.7/dadi/DFE 2019-12-11T17:48:10 copying dadi/DFE/Cache2D_mod.py -> build/lib.linux-armv7l-3.7/dadi/DFE 2019-12-11T17:48:10 copying dadi/DFE/__init__.py -> build/lib.linux-armv7l-3.7/dadi/DFE 2019-12-11T17:48:10 copying dadi/DFE/Plotting.py -> build/lib.linux-armv7l-3.7/dadi/DFE 2019-12-11T17:48:10 creating build/lib.linux-armv7l-3.7/dadi/TwoLocus 2019-12-11T17:48:10 copying dadi/TwoLocus/demographics.py -> build/lib.linux-armv7l-3.7/dadi/TwoLocus 2019-12-11T17:48:10 copying dadi/TwoLocus/numerics.py -> build/lib.linux-armv7l-3.7/dadi/TwoLocus 2019-12-11T17:48:10 copying dadi/TwoLocus/inference.py -> build/lib.linux-armv7l-3.7/dadi/TwoLocus 2019-12-11T17:48:10 copying dadi/TwoLocus/TLSpectrum_mod.py -> build/lib.linux-armv7l-3.7/dadi/TwoLocus 2019-12-11T17:48:10 copying dadi/TwoLocus/plotting.py -> build/lib.linux-armv7l-3.7/dadi/TwoLocus 2019-12-11T17:48:10 copying dadi/TwoLocus/__init__.py -> build/lib.linux-armv7l-3.7/dadi/TwoLocus 2019-12-11T17:48:11 copying dadi/TwoLocus/integration.py -> build/lib.linux-armv7l-3.7/dadi/TwoLocus 2019-12-11T17:48:11 creating build/lib.linux-armv7l-3.7/dadi/Triallele 2019-12-11T17:48:11 copying dadi/Triallele/demographics.py -> build/lib.linux-armv7l-3.7/dadi/Triallele 2019-12-11T17:48:11 copying dadi/Triallele/numerics.py -> build/lib.linux-armv7l-3.7/dadi/Triallele 2019-12-11T17:48:11 copying dadi/Triallele/plotting.py -> build/lib.linux-armv7l-3.7/dadi/Triallele 2019-12-11T17:48:11 copying dadi/Triallele/TriSpectrum_mod.py -> build/lib.linux-armv7l-3.7/dadi/Triallele 2019-12-11T17:48:11 copying dadi/Triallele/__init__.py -> build/lib.linux-armv7l-3.7/dadi/Triallele 2019-12-11T17:48:11 copying dadi/Triallele/integration.py -> build/lib.linux-armv7l-3.7/dadi/Triallele 2019-12-11T17:48:11 copying dadi/DFE/PDFs_c.cpython-37m-darwin.so -> build/lib.linux-armv7l-3.7/dadi/DFE 2019-12-11T17:48:11 copying dadi/TwoLocus/projection_genotypes.cpython-37m-darwin.so -> build/lib.linux-armv7l-3.7/dadi/TwoLocus 2019-12-11T17:48:11 copying dadi/TwoLocus/surface_interaction.cpython-37m-darwin.so -> build/lib.linux-armv7l-3.7/dadi/TwoLocus 2019-12-11T17:48:11 copying dadi/TwoLocus/transition13.cpython-37m-darwin.so -> build/lib.linux-armv7l-3.7/dadi/TwoLocus 2019-12-11T17:48:11 copying dadi/TwoLocus/transition1.cpython-37m-darwin.so -> build/lib.linux-armv7l-3.7/dadi/TwoLocus 2019-12-11T17:48:11 copying dadi/TwoLocus/transition1D.cpython-37m-darwin.so -> build/lib.linux-armv7l-3.7/dadi/TwoLocus 2019-12-11T17:48:11 copying dadi/TwoLocus/transition12.cpython-37m-darwin.so -> build/lib.linux-armv7l-3.7/dadi/TwoLocus 2019-12-11T17:48:11 copying dadi/TwoLocus/transition2.cpython-37m-darwin.so -> build/lib.linux-armv7l-3.7/dadi/TwoLocus 2019-12-11T17:48:11 copying dadi/TwoLocus/transition3.cpython-37m-darwin.so -> build/lib.linux-armv7l-3.7/dadi/TwoLocus 2019-12-11T17:48:11 copying dadi/TwoLocus/transition23.cpython-37m-darwin.so -> build/lib.linux-armv7l-3.7/dadi/TwoLocus 2019-12-11T17:48:11 copying dadi/Triallele/transition1.cpython-37m-darwin.so -> build/lib.linux-armv7l-3.7/dadi/Triallele 2019-12-11T17:48:11 copying dadi/Triallele/transition1D.cpython-37m-darwin.so -> build/lib.linux-armv7l-3.7/dadi/Triallele 2019-12-11T17:48:11 copying dadi/Triallele/transition12.cpython-37m-darwin.so -> build/lib.linux-armv7l-3.7/dadi/Triallele 2019-12-11T17:48:11 copying dadi/Triallele/transition2.cpython-37m-darwin.so -> build/lib.linux-armv7l-3.7/dadi/Triallele 2019-12-11T17:48:11 running build_ext 2019-12-11T17:48:11 customize UnixCCompiler 2019-12-11T17:48:11 customize UnixCCompiler using build_ext 2019-12-11T17:48:11 building 'dadi.tridiag' extension 2019-12-11T17:48:11 compiling C sources 2019-12-11T17:48:11 C compiler: arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC 2019-12-11T17:48:11 creating build/temp.linux-armv7l-3.7/build 2019-12-11T17:48:11 creating build/temp.linux-armv7l-3.7/build/src.linux-armv7l-3.7 2019-12-11T17:48:11 creating build/temp.linux-armv7l-3.7/build/src.linux-armv7l-3.7/dadi 2019-12-11T17:48:11 creating build/temp.linux-armv7l-3.7/dadi 2019-12-11T17:48:11 creating build/temp.linux-armv7l-3.7/build/src.linux-armv7l-3.7/build 2019-12-11T17:48:11 creating build/temp.linux-armv7l-3.7/build/src.linux-armv7l-3.7/build/src.linux-armv7l-3.7 2019-12-11T17:48:11 creating build/temp.linux-armv7l-3.7/build/src.linux-armv7l-3.7/build/src.linux-armv7l-3.7/dadi 2019-12-11T17:48:11 compile options: '-Ibuild/src.linux-armv7l-3.7/build/src.linux-armv7l-3.7/dadi -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.7m -c' 2019-12-11T17:48:11 arm-linux-gnueabihf-gcc: dadi/tridiag.carm-linux-gnueabihf-gcc: build/src.linux-armv7l-3.7/dadi/tridiagmodule.c 2019-12-11T17:48:11 arm-linux-gnueabihf-gcc: build/src.linux-armv7l-3.7/build/src.linux-armv7l-3.7/dadi/fortranobject.c 2019-12-11T17:48:11 In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822, 2019-12-11T17:48:11 from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2019-12-11T17:48:11 from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, 2019-12-11T17:48:11 from build/src.linux-armv7l-3.7/build/src.linux-armv7l-3.7/dadi/fortranobject.h:13, 2019-12-11T17:48:11 from build/src.linux-armv7l-3.7/build/src.linux-armv7l-3.7/dadi/fortranobject.c:2: 2019-12-11T17:48:11 /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2019-12-11T17:48:11 #warning "Using deprecated NumPy API, disable it with " \ 2019-12-11T17:48:11 ^~~~~~~ 2019-12-11T17:48:11 In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822, 2019-12-11T17:48:11 from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2019-12-11T17:48:11 from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, 2019-12-11T17:48:11 from build/src.linux-armv7l-3.7/build/src.linux-armv7l-3.7/dadi/fortranobject.h:13, 2019-12-11T17:48:11 from build/src.linux-armv7l-3.7/dadi/tridiagmodule.c:16: 2019-12-11T17:48:11 /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2019-12-11T17:48:11 #warning "Using deprecated NumPy API, disable it with " \ 2019-12-11T17:48:11 ^~~~~~~ 2019-12-11T17:48:11 build/src.linux-armv7l-3.7/dadi/tridiagmodule.c:102:12: warning: ‘f2py_size’ defined but not used [-Wunused-function] 2019-12-11T17:48:11 static int f2py_size(PyArrayObject* var, ...) 2019-12-11T17:48:11 ^~~~~~~~~ 2019-12-11T17:48:13 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.7/build/src.linux-armv7l-3.7/dadi/tridiagmodule.o build/temp.linux-armv7l-3.7/dadi/tridiag.o build/temp.linux-armv7l-3.7/build/src.linux-armv7l-3.7/build/src.linux-armv7l-3.7/dadi/fortranobject.o -o build/lib.linux-armv7l-3.7/dadi/tridiag.cpython-37m-arm-linux-gnueabihf.so 2019-12-11T17:48:13 building 'dadi.integration_c' extension 2019-12-11T17:48:13 compiling C sources 2019-12-11T17:48:13 C compiler: arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC 2019-12-11T17:48:13 compile options: '-Ibuild/src.linux-armv7l-3.7/build/src.linux-armv7l-3.7/dadi -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.7m -c' 2019-12-11T17:48:13 arm-linux-gnueabihf-gcc: build/src.linux-armv7l-3.7/dadi/integration_cmodule.carm-linux-gnueabihf-gcc: dadi/integration1D.c 2019-12-11T17:48:13 arm-linux-gnueabihf-gcc: dadi/integration3D.c 2019-12-11T17:48:13 arm-linux-gnueabihf-gcc: dadi/integration2D.c 2019-12-11T17:48:14 arm-linux-gnueabihf-gcc: dadi/integration_shared.c 2019-12-11T17:48:14 In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822, 2019-12-11T17:48:14 from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2019-12-11T17:48:14 from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, 2019-12-11T17:48:14 from build/src.linux-armv7l-3.7/build/src.linux-armv7l-3.7/dadi/fortranobject.h:13, 2019-12-11T17:48:14 from build/src.linux-armv7l-3.7/dadi/integration_cmodule.c:16: 2019-12-11T17:48:14 /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2019-12-11T17:48:14 #warning "Using deprecated NumPy API, disable it with " \ 2019-12-11T17:48:14 ^~~~~~~ 2019-12-11T17:48:14 build/src.linux-armv7l-3.7/dadi/integration_cmodule.c:102:12: warning: ‘f2py_size’ defined but not used [-Wunused-function] 2019-12-11T17:48:14 static int f2py_size(PyArrayObject* var, ...) 2019-12-11T17:48:14 ^~~~~~~~~ 2019-12-11T17:48:16 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.7/build/src.linux-armv7l-3.7/dadi/integration_cmodule.o build/temp.linux-armv7l-3.7/dadi/integration1D.o build/temp.linux-armv7l-3.7/dadi/integration2D.o build/temp.linux-armv7l-3.7/dadi/integration3D.o build/temp.linux-armv7l-3.7/dadi/integration_shared.o build/temp.linux-armv7l-3.7/dadi/tridiag.o build/temp.linux-armv7l-3.7/build/src.linux-armv7l-3.7/build/src.linux-armv7l-3.7/dadi/fortranobject.o -o build/lib.linux-armv7l-3.7/dadi/integration_c.cpython-37m-arm-linux-gnueabihf.so 2019-12-11T17:48:17 building 'dadi.DFE.PDFs_c' extension 2019-12-11T17:48:17 compiling C sources 2019-12-11T17:48:17 C compiler: arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC 2019-12-11T17:48:17 creating build/temp.linux-armv7l-3.7/build/src.linux-armv7l-3.7/dadi/DFE 2019-12-11T17:48:17 creating build/temp.linux-armv7l-3.7/dadi/DFE 2019-12-11T17:48:17 creating build/temp.linux-armv7l-3.7/build/src.linux-armv7l-3.7/build/src.linux-armv7l-3.7/dadi/DFE 2019-12-11T17:48:17 compile options: '-Ibuild/src.linux-armv7l-3.7/build/src.linux-armv7l-3.7/dadi/DFE -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.7m -c' 2019-12-11T17:48:17 arm-linux-gnueabihf-gcc: dadi/DFE/PDFs.carm-linux-gnueabihf-gcc: build/src.linux-armv7l-3.7/dadi/DFE/PDFs_cmodule.c 2019-12-11T17:48:17 arm-linux-gnueabihf-gcc: build/src.linux-armv7l-3.7/build/src.linux-armv7l-3.7/dadi/DFE/fortranobject.c 2019-12-11T17:48:17 dadi/DFE/PDFs.c:4: warning: "M_PI" redefined 2019-12-11T17:48:17 #define M_PI 3.14159265358979323846264338327950288 2019-12-11T17:48:17 In file included from dadi/DFE/PDFs.c:2: 2019-12-11T17:48:17 /usr/include/math.h:1065: note: this is the location of the previous definition 2019-12-11T17:48:17 # define M_PI 3.14159265358979323846 /* pi */ 2019-12-11T17:48:17 In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822, 2019-12-11T17:48:17 from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2019-12-11T17:48:17 from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, 2019-12-11T17:48:17 from build/src.linux-armv7l-3.7/build/src.linux-armv7l-3.7/dadi/DFE/fortranobject.h:13, 2019-12-11T17:48:17 from build/src.linux-armv7l-3.7/dadi/DFE/PDFs_cmodule.c:16: 2019-12-11T17:48:17 /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2019-12-11T17:48:17 #warning "Using deprecated NumPy API, disable it with " \ 2019-12-11T17:48:17 ^~~~~~~ 2019-12-11T17:48:17 In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822, 2019-12-11T17:48:17 from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2019-12-11T17:48:17 from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, 2019-12-11T17:48:17 from build/src.linux-armv7l-3.7/build/src.linux-armv7l-3.7/dadi/DFE/fortranobject.h:13, 2019-12-11T17:48:17 from build/src.linux-armv7l-3.7/build/src.linux-armv7l-3.7/dadi/DFE/fortranobject.c:2: 2019-12-11T17:48:17 /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2019-12-11T17:48:17 #warning "Using deprecated NumPy API, disable it with " \ 2019-12-11T17:48:17 ^~~~~~~ 2019-12-11T17:48:17 build/src.linux-armv7l-3.7/dadi/DFE/PDFs_cmodule.c:102:12: warning: ‘f2py_size’ defined but not used [-Wunused-function] 2019-12-11T17:48:17 static int f2py_size(PyArrayObject* var, ...) 2019-12-11T17:48:17 ^~~~~~~~~ 2019-12-11T17:48:19 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.7/build/src.linux-armv7l-3.7/dadi/DFE/PDFs_cmodule.o build/temp.linux-armv7l-3.7/dadi/DFE/PDFs.o build/temp.linux-armv7l-3.7/build/src.linux-armv7l-3.7/build/src.linux-armv7l-3.7/dadi/DFE/fortranobject.o -o build/lib.linux-armv7l-3.7/dadi/DFE/PDFs_c.cpython-37m-arm-linux-gnueabihf.so 2019-12-11T17:48:19 installing to build/bdist.linux-armv7l/wheel 2019-12-11T17:48:19 running install 2019-12-11T17:48:19 running install_lib 2019-12-11T17:48:19 creating build/bdist.linux-armv7l 2019-12-11T17:48:19 creating build/bdist.linux-armv7l/wheel 2019-12-11T17:48:19 creating build/bdist.linux-armv7l/wheel/dadi 2019-12-11T17:48:19 creating build/bdist.linux-armv7l/wheel/dadi/DFE 2019-12-11T17:48:19 copying build/lib.linux-armv7l-3.7/dadi/DFE/PDFs_c.cpython-37m-darwin.so -> build/bdist.linux-armv7l/wheel/dadi/DFE 2019-12-11T17:48:19 copying build/lib.linux-armv7l-3.7/dadi/DFE/Cache1D_mod.py -> build/bdist.linux-armv7l/wheel/dadi/DFE 2019-12-11T17:48:19 copying build/lib.linux-armv7l-3.7/dadi/DFE/DemogSelModels.py -> build/bdist.linux-armv7l/wheel/dadi/DFE 2019-12-11T17:48:19 copying build/lib.linux-armv7l-3.7/dadi/DFE/PDFs.py -> build/bdist.linux-armv7l/wheel/dadi/DFE 2019-12-11T17:48:19 copying build/lib.linux-armv7l-3.7/dadi/DFE/Cache2D_mod.py -> build/bdist.linux-armv7l/wheel/dadi/DFE 2019-12-11T17:48:19 copying build/lib.linux-armv7l-3.7/dadi/DFE/__init__.py -> build/bdist.linux-armv7l/wheel/dadi/DFE 2019-12-11T17:48:19 copying build/lib.linux-armv7l-3.7/dadi/DFE/PDFs_c.cpython-37m-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/dadi/DFE 2019-12-11T17:48:19 copying build/lib.linux-armv7l-3.7/dadi/DFE/Plotting.py -> build/bdist.linux-armv7l/wheel/dadi/DFE 2019-12-11T17:48:19 copying build/lib.linux-armv7l-3.7/dadi/Misc.py -> build/bdist.linux-armv7l/wheel/dadi 2019-12-11T17:48:19 copying build/lib.linux-armv7l-3.7/dadi/Demographics2D.py -> build/bdist.linux-armv7l/wheel/dadi 2019-12-11T17:48:19 copying build/lib.linux-armv7l-3.7/dadi/tridiag.cpython-37m-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/dadi 2019-12-11T17:48:19 copying build/lib.linux-armv7l-3.7/dadi/Godambe.py -> build/bdist.linux-armv7l/wheel/dadi 2019-12-11T17:48:19 copying build/lib.linux-armv7l-3.7/dadi/Demographics1D.py -> build/bdist.linux-armv7l/wheel/dadi 2019-12-11T17:48:19 copying build/lib.linux-armv7l-3.7/dadi/Inference.py -> build/bdist.linux-armv7l/wheel/dadi 2019-12-11T17:48:19 copying build/lib.linux-armv7l-3.7/dadi/NLopt_mod.py -> build/bdist.linux-armv7l/wheel/dadi 2019-12-11T17:48:19 creating build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2019-12-11T17:48:19 copying build/lib.linux-armv7l-3.7/dadi/TwoLocus/demographics.py -> build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2019-12-11T17:48:19 copying build/lib.linux-armv7l-3.7/dadi/TwoLocus/projection_genotypes.cpython-37m-darwin.so -> build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2019-12-11T17:48:19 copying build/lib.linux-armv7l-3.7/dadi/TwoLocus/surface_interaction.cpython-37m-darwin.so -> build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2019-12-11T17:48:19 copying build/lib.linux-armv7l-3.7/dadi/TwoLocus/transition13.cpython-37m-darwin.so -> build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2019-12-11T17:48:19 copying build/lib.linux-armv7l-3.7/dadi/TwoLocus/transition1.cpython-37m-darwin.so -> build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2019-12-11T17:48:19 copying build/lib.linux-armv7l-3.7/dadi/TwoLocus/transition1D.cpython-37m-darwin.so -> build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2019-12-11T17:48:19 copying build/lib.linux-armv7l-3.7/dadi/TwoLocus/transition12.cpython-37m-darwin.so -> build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2019-12-11T17:48:19 copying build/lib.linux-armv7l-3.7/dadi/TwoLocus/numerics.py -> build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2019-12-11T17:48:19 copying build/lib.linux-armv7l-3.7/dadi/TwoLocus/inference.py -> build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2019-12-11T17:48:20 copying build/lib.linux-armv7l-3.7/dadi/TwoLocus/TLSpectrum_mod.py -> build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2019-12-11T17:48:20 copying build/lib.linux-armv7l-3.7/dadi/TwoLocus/plotting.py -> build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2019-12-11T17:48:20 copying build/lib.linux-armv7l-3.7/dadi/TwoLocus/transition2.cpython-37m-darwin.so -> build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2019-12-11T17:48:20 copying build/lib.linux-armv7l-3.7/dadi/TwoLocus/transition3.cpython-37m-darwin.so -> build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2019-12-11T17:48:20 copying build/lib.linux-armv7l-3.7/dadi/TwoLocus/__init__.py -> build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2019-12-11T17:48:20 copying build/lib.linux-armv7l-3.7/dadi/TwoLocus/transition23.cpython-37m-darwin.so -> build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2019-12-11T17:48:20 copying build/lib.linux-armv7l-3.7/dadi/TwoLocus/integration.py -> build/bdist.linux-armv7l/wheel/dadi/TwoLocus 2019-12-11T17:48:20 copying build/lib.linux-armv7l-3.7/dadi/integration_c.cpython-37m-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/dadi 2019-12-11T17:48:20 copying build/lib.linux-armv7l-3.7/dadi/Numerics.py -> build/bdist.linux-armv7l/wheel/dadi 2019-12-11T17:48:20 copying build/lib.linux-armv7l-3.7/dadi/PhiManip.py -> build/bdist.linux-armv7l/wheel/dadi 2019-12-11T17:48:20 copying build/lib.linux-armv7l-3.7/dadi/Spectrum_mod.py -> build/bdist.linux-armv7l/wheel/dadi 2019-12-11T17:48:20 creating build/bdist.linux-armv7l/wheel/dadi/Triallele 2019-12-11T17:48:20 copying build/lib.linux-armv7l-3.7/dadi/Triallele/demographics.py -> build/bdist.linux-armv7l/wheel/dadi/Triallele 2019-12-11T17:48:20 copying build/lib.linux-armv7l-3.7/dadi/Triallele/transition1.cpython-37m-darwin.so -> build/bdist.linux-armv7l/wheel/dadi/Triallele 2019-12-11T17:48:20 copying build/lib.linux-armv7l-3.7/dadi/Triallele/transition1D.cpython-37m-darwin.so -> build/bdist.linux-armv7l/wheel/dadi/Triallele 2019-12-11T17:48:20 copying build/lib.linux-armv7l-3.7/dadi/Triallele/transition12.cpython-37m-darwin.so -> build/bdist.linux-armv7l/wheel/dadi/Triallele 2019-12-11T17:48:20 copying build/lib.linux-armv7l-3.7/dadi/Triallele/numerics.py -> build/bdist.linux-armv7l/wheel/dadi/Triallele 2019-12-11T17:48:20 copying build/lib.linux-armv7l-3.7/dadi/Triallele/plotting.py -> build/bdist.linux-armv7l/wheel/dadi/Triallele 2019-12-11T17:48:20 copying build/lib.linux-armv7l-3.7/dadi/Triallele/TriSpectrum_mod.py -> build/bdist.linux-armv7l/wheel/dadi/Triallele 2019-12-11T17:48:20 copying build/lib.linux-armv7l-3.7/dadi/Triallele/transition2.cpython-37m-darwin.so -> build/bdist.linux-armv7l/wheel/dadi/Triallele 2019-12-11T17:48:20 copying build/lib.linux-armv7l-3.7/dadi/Triallele/__init__.py -> build/bdist.linux-armv7l/wheel/dadi/Triallele 2019-12-11T17:48:20 copying build/lib.linux-armv7l-3.7/dadi/Triallele/integration.py -> build/bdist.linux-armv7l/wheel/dadi/Triallele 2019-12-11T17:48:20 copying build/lib.linux-armv7l-3.7/dadi/__init__.py -> build/bdist.linux-armv7l/wheel/dadi 2019-12-11T17:48:20 copying build/lib.linux-armv7l-3.7/dadi/Integration.py -> build/bdist.linux-armv7l/wheel/dadi 2019-12-11T17:48:20 copying build/lib.linux-armv7l-3.7/dadi/Plotting.py -> build/bdist.linux-armv7l/wheel/dadi 2019-12-11T17:48:20 running install_egg_info 2019-12-11T17:48:20 running egg_info 2019-12-11T17:48:20 writing dadi.egg-info/PKG-INFO 2019-12-11T17:48:20 writing dependency_links to dadi.egg-info/dependency_links.txt 2019-12-11T17:48:20 writing top-level names to dadi.egg-info/top_level.txt 2019-12-11T17:48:20 reading manifest file 'dadi.egg-info/SOURCES.txt' 2019-12-11T17:48:20 reading manifest template 'MANIFEST.in' 2019-12-11T17:48:20 warning: no previously-included files matching '*.msout' found anywhere in distribution 2019-12-11T17:48:20 warning: no previously-included files matching '*.swp' found anywhere in distribution 2019-12-11T17:48:20 warning: no previously-included files matching '*.pyc' found anywhere in distribution 2019-12-11T17:48:20 warning: no previously-included files matching 'seedms' found anywhere in distribution 2019-12-11T17:48:20 warning: no previously-included files matching '*.png' found anywhere in distribution 2019-12-11T17:48:20 warning: no previously-included files matching '*.bpkl' found anywhere in distribution 2019-12-11T17:48:20 warning: no previously-included files matching '*.npz' found anywhere in distribution 2019-12-11T17:48:20 writing manifest file 'dadi.egg-info/SOURCES.txt' 2019-12-11T17:48:20 Copying dadi.egg-info to build/bdist.linux-armv7l/wheel/dadi-2.0.4-py3.7.egg-info 2019-12-11T17:48:20 running install_scripts 2019-12-11T17:48:20 running install_clib 2019-12-11T17:48:20 customize UnixCCompiler 2019-12-11T17:48:20 adding license file "LICENSE.txt" (matched pattern "LICEN[CS]E*") 2019-12-11T17:48:20 creating build/bdist.linux-armv7l/wheel/dadi-2.0.4.dist-info/WHEEL 2019-12-11T17:48:20 creating '/tmp/pip-wheel-uw_dnviu/dadi-2.0.4-cp37-cp37m-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2019-12-11T17:48:20 adding 'dadi/Demographics1D.py' 2019-12-11T17:48:20 adding 'dadi/Demographics2D.py' 2019-12-11T17:48:20 adding 'dadi/Godambe.py' 2019-12-11T17:48:20 adding 'dadi/Inference.py' 2019-12-11T17:48:20 adding 'dadi/Integration.py' 2019-12-11T17:48:20 adding 'dadi/Misc.py' 2019-12-11T17:48:20 adding 'dadi/NLopt_mod.py' 2019-12-11T17:48:20 adding 'dadi/Numerics.py' 2019-12-11T17:48:20 adding 'dadi/PhiManip.py' 2019-12-11T17:48:20 adding 'dadi/Plotting.py' 2019-12-11T17:48:20 adding 'dadi/Spectrum_mod.py' 2019-12-11T17:48:20 adding 'dadi/__init__.py' 2019-12-11T17:48:20 adding 'dadi/integration_c.cpython-37m-arm-linux-gnueabihf.so' 2019-12-11T17:48:20 adding 'dadi/tridiag.cpython-37m-arm-linux-gnueabihf.so' 2019-12-11T17:48:20 adding 'dadi/DFE/Cache1D_mod.py' 2019-12-11T17:48:20 adding 'dadi/DFE/Cache2D_mod.py' 2019-12-11T17:48:20 adding 'dadi/DFE/DemogSelModels.py' 2019-12-11T17:48:20 adding 'dadi/DFE/PDFs.py' 2019-12-11T17:48:20 adding 'dadi/DFE/PDFs_c.cpython-37m-arm-linux-gnueabihf.so' 2019-12-11T17:48:21 adding 'dadi/DFE/PDFs_c.cpython-37m-darwin.so' 2019-12-11T17:48:21 adding 'dadi/DFE/Plotting.py' 2019-12-11T17:48:21 adding 'dadi/DFE/__init__.py' 2019-12-11T17:48:21 adding 'dadi/Triallele/TriSpectrum_mod.py' 2019-12-11T17:48:21 adding 'dadi/Triallele/__init__.py' 2019-12-11T17:48:21 adding 'dadi/Triallele/demographics.py' 2019-12-11T17:48:21 adding 'dadi/Triallele/integration.py' 2019-12-11T17:48:21 adding 'dadi/Triallele/numerics.py' 2019-12-11T17:48:21 adding 'dadi/Triallele/plotting.py' 2019-12-11T17:48:21 adding 'dadi/Triallele/transition1.cpython-37m-darwin.so' 2019-12-11T17:48:21 adding 'dadi/Triallele/transition12.cpython-37m-darwin.so' 2019-12-11T17:48:21 adding 'dadi/Triallele/transition1D.cpython-37m-darwin.so' 2019-12-11T17:48:21 adding 'dadi/Triallele/transition2.cpython-37m-darwin.so' 2019-12-11T17:48:21 adding 'dadi/TwoLocus/TLSpectrum_mod.py' 2019-12-11T17:48:21 adding 'dadi/TwoLocus/__init__.py' 2019-12-11T17:48:21 adding 'dadi/TwoLocus/demographics.py' 2019-12-11T17:48:21 adding 'dadi/TwoLocus/inference.py' 2019-12-11T17:48:21 adding 'dadi/TwoLocus/integration.py' 2019-12-11T17:48:21 adding 'dadi/TwoLocus/numerics.py' 2019-12-11T17:48:21 adding 'dadi/TwoLocus/plotting.py' 2019-12-11T17:48:21 adding 'dadi/TwoLocus/projection_genotypes.cpython-37m-darwin.so' 2019-12-11T17:48:21 adding 'dadi/TwoLocus/surface_interaction.cpython-37m-darwin.so' 2019-12-11T17:48:21 adding 'dadi/TwoLocus/transition1.cpython-37m-darwin.so' 2019-12-11T17:48:21 adding 'dadi/TwoLocus/transition12.cpython-37m-darwin.so' 2019-12-11T17:48:21 adding 'dadi/TwoLocus/transition13.cpython-37m-darwin.so' 2019-12-11T17:48:21 adding 'dadi/TwoLocus/transition1D.cpython-37m-darwin.so' 2019-12-11T17:48:21 adding 'dadi/TwoLocus/transition2.cpython-37m-darwin.so' 2019-12-11T17:48:21 adding 'dadi/TwoLocus/transition23.cpython-37m-darwin.so' 2019-12-11T17:48:21 adding 'dadi/TwoLocus/transition3.cpython-37m-darwin.so' 2019-12-11T17:48:21 adding 'dadi-2.0.4.dist-info/LICENSE.txt' 2019-12-11T17:48:21 adding 'dadi-2.0.4.dist-info/METADATA' 2019-12-11T17:48:21 adding 'dadi-2.0.4.dist-info/WHEEL' 2019-12-11T17:48:21 adding 'dadi-2.0.4.dist-info/top_level.txt' 2019-12-11T17:48:21 adding 'dadi-2.0.4.dist-info/RECORD' 2019-12-11T17:48:21 removing build/bdist.linux-armv7l/wheel 2019-12-11T17:48:21 Building wheel for dadi (setup.py): finished with status 'done' 2019-12-11T17:48:21 Stored in directory: /tmp/tmp1v3day7f 2019-12-11T17:48:21 Successfully built dadi 2019-12-11T17:48:21 Cleaning up... 2019-12-11T17:48:21 Removing source in /tmp/pip-wheel-9lwf448v/dadi 2019-12-11T17:48:21 Removed build tracker '/tmp/pip-req-tracker-cx2dgxdq'