2019-12-13T19:22:21 Created temporary directory: /tmp/pip-ephem-wheel-cache-ywaprp1v 2019-12-13T19:22:21 Created temporary directory: /tmp/pip-req-tracker-unt7c6zt 2019-12-13T19:22:21 Created requirements tracker '/tmp/pip-req-tracker-unt7c6zt' 2019-12-13T19:22:21 Created temporary directory: /tmp/pip-wheel-8gknoa_7 2019-12-13T19:22:21 Collecting starfish==0.1.10 2019-12-13T19:22:21 1 location(s) to search for versions of starfish: 2019-12-13T19:22:21 * https://pypi.org/simple/starfish/ 2019-12-13T19:22:21 Getting page https://pypi.org/simple/starfish/ 2019-12-13T19:22:21 Analyzing links from page https://pypi.org/simple/starfish/ 2019-12-13T19:22:21 Found link https://files.pythonhosted.org/packages/ca/cb/a87eaed3aadd4749c556b05f37a30a0b262793bf382d543fe18c84728daa/starfish-0.0.0a0-py3-none-any.whl#sha256=4b01ef557ca9f870cf8a70eedc8735d845bf6db1dda1d8e5ec179a8b49f8b08f (from https://pypi.org/simple/starfish/), version: 0.0.0a0 2019-12-13T19:22:21 Found link https://files.pythonhosted.org/packages/31/70/6a03a0c66bd29cd3dc7c45f9461454789c06b71d8724a49612317fc1b786/starfish-0.0.0a0.tar.gz#sha256=ab0c6a88251ddabe7b71ae53c4da343518a9e4cd72e953f8a96536b35384779c (from https://pypi.org/simple/starfish/), version: 0.0.0a0 2019-12-13T19:22:21 Found link https://files.pythonhosted.org/packages/19/bd/49494f9d81b209b2e6c0596ea3012823dc2a617149ba1e26ff1a47649a81/starfish-0.0.0a1-py3-none-any.whl#sha256=bd3e716eb37bfc003b63c953dc8c56de9a5af57a3100483645abfdb2fd6094c2 (from https://pypi.org/simple/starfish/), version: 0.0.0a1 2019-12-13T19:22:21 Found link https://files.pythonhosted.org/packages/d9/ef/51b0999ff891471226353b6bd9be16c01acdb8fef09f9674dce714639e1c/starfish-0.0.0a1.tar.gz#sha256=7e3d1124497e416fc075e53fbfcd35b2f5cda2fc085368a802766a4dea80edba (from https://pypi.org/simple/starfish/), version: 0.0.0a1 2019-12-13T19:22:21 Found link https://files.pythonhosted.org/packages/31/cf/91118662326541c4b9f03fcc8be13827b0d68c47ff043560627de6709d22/starfish-0.0.2.tar.gz#sha256=ac1d777edf2702609d70bf3e20cdac5a62f38c3d1fc6a70bcc51868d8d85f44a (from https://pypi.org/simple/starfish/), version: 0.0.2 2019-12-13T19:22:21 Found link https://files.pythonhosted.org/packages/ce/cd/a7f804272ac806409bd722be560bea46eb3a62534aa67b363c9beac4747c/starfish-0.0.3.tar.gz#sha256=cecec6548136e73cb7b4db3c0abfe9a5a0f962085925b79df54b73ffa88791f8 (from https://pypi.org/simple/starfish/), version: 0.0.3 2019-12-13T19:22:21 Found link https://files.pythonhosted.org/packages/ad/65/e1d95d420fc114563ed8baeccf173d7313ca5c3c2c905d53e9a152819481/starfish-0.0.4.tar.gz#sha256=8dd61f8b87338e165ea9f132a51120540e67d0c0b4c762fa24689a0507189906 (from https://pypi.org/simple/starfish/), version: 0.0.4 2019-12-13T19:22:21 Found link https://files.pythonhosted.org/packages/35/38/1971faa6f669e34ef2d9af3911b85799bedde67545538e2380b696232a26/starfish-0.0.5.tar.gz#sha256=4b323f45fabf51b3fcd36ad8961243d5005cf16ff07d600519c8fe61573cfc56 (from https://pypi.org/simple/starfish/), version: 0.0.5 2019-12-13T19:22:21 Found link https://files.pythonhosted.org/packages/57/66/fff766bf2472c44be06a53ab1dd6a7e7fefa650b96a289ac23cac9b19f23/starfish-0.0.6.tar.gz#sha256=5941208513ab2a0becb958325574a8403e0e39e02b1eb83f339b480ccb8cdbfe (from https://pypi.org/simple/starfish/), version: 0.0.6 2019-12-13T19:22:21 Found link https://files.pythonhosted.org/packages/0d/21/507e1934196ed40c8321658637cb951510d9a0f542f56f787312130c8646/starfish-0.0.7.tar.gz#sha256=cb469d86223cac312c2d9e15252c0d9d0adb9de1811820d3464f7478a42bd37c (from https://pypi.org/simple/starfish/), version: 0.0.7 2019-12-13T19:22:21 Found link https://files.pythonhosted.org/packages/54/54/69c896987823b6b791a2eba8d2365e1818fcb5ad5f26cf23f8caab251927/starfish-0.0.8.tar.gz#sha256=c9e37a7ec8af5c27983c08082fa49e930b27047d04c3b3931b594130aeceed5b (from https://pypi.org/simple/starfish/), version: 0.0.8 2019-12-13T19:22:21 Found link https://files.pythonhosted.org/packages/5e/13/d045fc66b17e4e9fb979e245e454bec6a5c0be1ad732f4ae1dbe78dfdbf6/starfish-0.0.9.tar.gz#sha256=57af8c628c3d24a95cf4504515b9e4682794dd6bfd164997e8cc32eaa5dcb998 (from https://pypi.org/simple/starfish/), version: 0.0.9 2019-12-13T19:22:21 Found link https://files.pythonhosted.org/packages/9d/c0/5cc35177ea5bb7080c4a037c00ffe6042f5e6eaa1f955b9d585c99e246a6/starfish-0.0.10.tar.gz#sha256=3344aba084fd1bcc402dbfd7c3d8a3d05799ede8d9e003a3d03241df9652dde4 (from https://pypi.org/simple/starfish/), version: 0.0.10 2019-12-13T19:22:21 Found link https://files.pythonhosted.org/packages/d5/bf/05f8011dcea7751c3925123eef251b243213a733b359fb3e62eea896b8ed/starfish-0.0.11.tar.gz#sha256=7c3bb0c65994ff75717896c077a70f59685d82e3e4a79241c1b1a11c3d16c323 (from https://pypi.org/simple/starfish/), version: 0.0.11 2019-12-13T19:22:21 Found link https://files.pythonhosted.org/packages/f9/d4/3a7b082325a86c7f0e62f0437aecd48699e1a0b12615ea8568fa6f480af5/starfish-0.0.12.tar.gz#sha256=1b902333869eb0df3e2f786ddd1c5781f51d122b2413736bf02b2c24addbf7e0 (from https://pypi.org/simple/starfish/), version: 0.0.12 2019-12-13T19:22:21 Found link https://files.pythonhosted.org/packages/98/b2/e84c9dbcccc64de43bd2dcd4a9c3607e70614c9b4def028423cb9471649c/starfish-0.0.14.tar.gz#sha256=2aa115c1dc4791bc60c3f20fb7cea916cb59a9cf6a32f522a098d6c7478db66d (from https://pypi.org/simple/starfish/), version: 0.0.14 2019-12-13T19:22:21 Found link https://files.pythonhosted.org/packages/f4/55/8289cdb579668dab27dc960d5a002c54c6beb257e6a8890f533f80070b32/starfish-0.0.15.tar.gz#sha256=976c76526dea8035c2fee436e753185eb8b32a4b22d41869219e0b7878612fb1 (from https://pypi.org/simple/starfish/), version: 0.0.15 2019-12-13T19:22:21 Found link https://files.pythonhosted.org/packages/05/08/35e7bed39030aaf871cb933457749a0c641189ed933cd915552eebe0ab40/starfish-0.0.16.tar.gz#sha256=2390bdc72d97c72a93aed66ba45ace2be59d32cfa9e73f80e72d94fe628806db (from https://pypi.org/simple/starfish/), version: 0.0.16 2019-12-13T19:22:21 Found link https://files.pythonhosted.org/packages/90/71/e2b1fd618596c4a326e72203ed52f8d7ce0b0bb373e152f6ad3052621f19/starfish-0.0.17.tar.gz#sha256=5c84fd8fa721177009f2f43db59b8005d0901a9065b3530fedd8e44e62daf623 (from https://pypi.org/simple/starfish/), version: 0.0.17 2019-12-13T19:22:21 Found link https://files.pythonhosted.org/packages/09/39/a96216d4b90b2728365503d9fe4b4f9dfec34679b162f6b13b1f7c007a9d/starfish-0.0.18.tar.gz#sha256=faaa0aeeb2248835eb4ad7134419c2716b75047cb71a9968e04b4738964d13ea (from https://pypi.org/simple/starfish/), version: 0.0.18 2019-12-13T19:22:21 Found link https://files.pythonhosted.org/packages/a7/64/0561019d53b8e75c8169f1ff9d2bf77f86a21eeae3be7e43f2858b449fa1/starfish-0.0.19.tar.gz#sha256=ca5d7d7202f1f13e986e87131cf4d6baee3d750c7e166c095efbaf9ca57c0490 (from https://pypi.org/simple/starfish/), version: 0.0.19 2019-12-13T19:22:21 Found link https://files.pythonhosted.org/packages/93/0f/b41f6d4269fccdbda7990ba460ba3a07d042b4d77a3ed0f647be7a3cdfd6/starfish-0.0.20.tar.gz#sha256=392a55b2edb360d8cd44c76f09f6518dfab53bb9722eeff5ebdfdf61c1518c86 (from https://pypi.org/simple/starfish/), version: 0.0.20 2019-12-13T19:22:21 Found link https://files.pythonhosted.org/packages/ff/41/b2044e30be97456cbdaba80bf6399141a8f964594264893b21b0082039ab/starfish-0.0.21.tar.gz#sha256=f19f1b5c8de438aabc8b3f5358a54961ee1518bf24db3e65ebb7564d861a186f (from https://pypi.org/simple/starfish/), version: 0.0.21 2019-12-13T19:22:21 Found link https://files.pythonhosted.org/packages/79/c0/5f26d8e2cd4d7f1179e45a903092a4011951c59668229731353aeb1f20e6/starfish-0.0.22.tar.gz#sha256=fcfd5572a2231fb4e951154b7a40e65e82ccbfdc2129fee66d0549a76aefd032 (from https://pypi.org/simple/starfish/), version: 0.0.22 2019-12-13T19:22:21 Found link https://files.pythonhosted.org/packages/47/ac/9b9123ed4525a16a898acc3deabc78ec14794bbc5275d0a136b11164455c/starfish-0.0.23.tar.gz#sha256=be952d95ff9ed286f407c4ffd1db8850f3644bec91b80cc11d63bea6e9087f6c (from https://pypi.org/simple/starfish/), version: 0.0.23 2019-12-13T19:22:21 Found link https://files.pythonhosted.org/packages/07/e6/92ce138e938b7971c441c5ca1e1936f3ba32ca739ddf7e19ffed6497b612/starfish-0.0.24.tar.gz#sha256=c60de01dd1b7235ee8570b3c36cf2ceb739fdebb2ee936cabcd216e022e9dc68 (from https://pypi.org/simple/starfish/), version: 0.0.24 2019-12-13T19:22:21 Found link https://files.pythonhosted.org/packages/6b/0f/392da7855e1e133cdb3394fc3261550e93933c7ebdb78044b2fa9c759f07/starfish-0.0.25.tar.gz#sha256=63debd4cc865f90d8f682b11da6cec3524bb254e05ee5188c4a0c09aac937a0c (from https://pypi.org/simple/starfish/), version: 0.0.25 2019-12-13T19:22:21 Found link https://files.pythonhosted.org/packages/e7/b6/9c8705a84994a7d91067d8a535c5d0a93254868ee2066a2ef1c2dcd0f2b8/starfish-0.0.26.tar.gz#sha256=8ceac96cc3b99cbb0b9487878e100a8efafd62a3e2cf4b2f878ab928feb5e286 (from https://pypi.org/simple/starfish/), version: 0.0.26 2019-12-13T19:22:21 Found link https://files.pythonhosted.org/packages/dd/e9/f1e261eb6f5f8c81407d04d969a45d869c91fab6095f57b0bf8b5ea0f513/starfish-0.0.27.tar.gz#sha256=9a62ee4ed40ce6af907414c210caabb381ce0bf470479d980dafba615420f7d9 (from https://pypi.org/simple/starfish/), version: 0.0.27 2019-12-13T19:22:21 Found link https://files.pythonhosted.org/packages/09/8d/6572ebc910ca56d134e896c9f0340d88669360b9712cd62fee7fe259b457/starfish-0.0.28.tar.gz#sha256=58b9ec25ec65ab9f83c664b0f812b74394da226431695a30bb1ec7f1c1df9d3d (from https://pypi.org/simple/starfish/), version: 0.0.28 2019-12-13T19:22:21 Found link https://files.pythonhosted.org/packages/09/9d/b8d45abbbf92f28d9a63fcd5da8e622b19523ed43542dd5d62d266481add/starfish-0.0.30.tar.gz#sha256=c5cda033afbb36e99353a9883053e994351a49e2f969920d35ac868a9d1720fe (from https://pypi.org/simple/starfish/), version: 0.0.30 2019-12-13T19:22:21 Found link https://files.pythonhosted.org/packages/7f/84/b1a6a919e181fc38b767c0e7a7961845b2b514d7585e2800665d182daae0/starfish-0.0.32.tar.gz#sha256=4d72a590776a416b51ab21478adaa5756b50e23737751f34c5f3c8721ea5aa34 (from https://pypi.org/simple/starfish/), version: 0.0.32 2019-12-13T19:22:21 Found link https://files.pythonhosted.org/packages/68/a7/8cac11c11305a43c95f9a76710c3f76a9354729cbc648c9cef02714f9cff/starfish-0.0.33.tar.gz#sha256=8748261215ab88b2dab752e7cc0f8c921d0b77bdaac9997b9bc96aaa74ae245f (from https://pypi.org/simple/starfish/), version: 0.0.33 2019-12-13T19:22:21 Found link https://files.pythonhosted.org/packages/29/37/c92cf43801c20099b17eb0c7578d2bcdbf8cd3d0e811ca62614f6eb990f4/starfish-0.0.34.tar.gz#sha256=9a391e33cc2a632a262da2bd37f2c3e302f31dffbc982e4b2cbf196dc2f643eb (from https://pypi.org/simple/starfish/), version: 0.0.34 2019-12-13T19:22:21 Found link https://files.pythonhosted.org/packages/59/04/4312e1a9f79c12b59be63599494e158f050121ecf96c372cea5246cca4ae/starfish-0.0.35.tar.gz#sha256=03e8c30496676ca8e7ac83ae00ca10cd970c7680bb3cc62c12480318cbb3e31a (from https://pypi.org/simple/starfish/), version: 0.0.35 2019-12-13T19:22:21 Found link https://files.pythonhosted.org/packages/18/6d/b19751970a223242fe77389a4af41775d43f5f9361be3909661ec185d733/starfish-0.0.36.tar.gz#sha256=0fa4a69b5034734dcafc603e54174a9562d5a271b22d803d0adf07fcf96bc26b (from https://pypi.org/simple/starfish/), version: 0.0.36 2019-12-13T19:22:21 Found link https://files.pythonhosted.org/packages/15/09/c02ba3942c673a052bdce8680e28a84799bf03b2cbf2ba92baf511417118/starfish-0.1.0.tar.gz#sha256=86776e0ca460fa9b06020e276453501e8b98c55dfbb47b775e36444fab221ece (from https://pypi.org/simple/starfish/), version: 0.1.0 2019-12-13T19:22:21 Found link https://files.pythonhosted.org/packages/9a/c3/f43d9e538dbad2b03845a6158356740c0534f7c311a98a1fdb752949f501/starfish-0.1.1.tar.gz#sha256=3df480add3d0b4ed790810ff40a0e3a0fdf341d2375d52f16e71c1e522eec239 (from https://pypi.org/simple/starfish/), version: 0.1.1 2019-12-13T19:22:21 Found link https://files.pythonhosted.org/packages/09/55/a22d0a20987938cd39b3095f573665eb1b385c449475d941d89b40466fdb/starfish-0.1.2.tar.gz#sha256=d84c4b13d2fb97e41c74e5be59040729d53b160884593b0d85ac7552827eda75 (from https://pypi.org/simple/starfish/), version: 0.1.2 2019-12-13T19:22:21 Found link https://files.pythonhosted.org/packages/16/58/766eedc12f26200e5f12a2d63a4222d49c82ae729d8c98d2f0cbd6909db2/starfish-0.1.3.tar.gz#sha256=19bec2a869affbca0a7e3fc0aee1b9978ff7f0f1a2a8551c2d4ae148a7ddc251 (from https://pypi.org/simple/starfish/), version: 0.1.3 2019-12-13T19:22:21 Found link https://files.pythonhosted.org/packages/a9/60/7a30d30b8d5f99046ecd85e89a371188eba4a6a05688fdcaf1babd6cab3f/starfish-0.1.4.tar.gz#sha256=b8c5f43a5bef5b69ac2f2376f59cf3f09f94677982cf5dedb9b84cecaf15a2fd (from https://pypi.org/simple/starfish/), version: 0.1.4 2019-12-13T19:22:21 Found link https://files.pythonhosted.org/packages/e6/a1/845173304e51ae574aa6ca75b2a7c8bfe9d644957a91860b732df0127abe/starfish-0.1.5.tar.gz#sha256=f138b5ee4ea63c6c37c0f235c8f7656d2176e439d5062536a226d9ede0aa94dd (from https://pypi.org/simple/starfish/), version: 0.1.5 2019-12-13T19:22:21 Found link https://files.pythonhosted.org/packages/3f/0f/31dab0c67a30f16be496a44335532a3d4021ef3728a4ac1f7a6237812523/starfish-0.1.6.tar.gz#sha256=edf048240a001591ce849d3d1f5d01f71887185e916260f950ea63cb466bbcda (from https://pypi.org/simple/starfish/), version: 0.1.6 2019-12-13T19:22:21 Found link https://files.pythonhosted.org/packages/b9/f7/3854f84f4087487c2e862285ad17a5bf4ef230c5d0234c8ca8462a056210/starfish-0.1.7.tar.gz#sha256=a88ce43fb2999f1219a43b8104d49334d19b2b31fd28f8710696b16768544d37 (from https://pypi.org/simple/starfish/), version: 0.1.7 2019-12-13T19:22:21 Found link https://files.pythonhosted.org/packages/14/66/0ca64718ba29483c84166aa1af364ae66dac28447a24c6f302d0e964838c/starfish-0.1.8.tar.gz#sha256=6924404b9ce7c55b427bebc5712656b87d17b5114e9fb610f2821865bd8d70f4 (from https://pypi.org/simple/starfish/), version: 0.1.8 2019-12-13T19:22:21 Found link https://files.pythonhosted.org/packages/56/9a/2de4f8a28a639433a1131f20246d1f04a6111356de7341388824ad8b61dc/starfish-0.1.9.tar.gz#sha256=02002b908572fcd2c7471475936a6c375f143d15df871399ce86ced6d7aef865 (from https://pypi.org/simple/starfish/), version: 0.1.9 2019-12-13T19:22:21 Found link https://files.pythonhosted.org/packages/be/9b/4215abcd20509c27b2885c6736e4640581d00b36e6e3ac178a53138c8f2e/starfish-0.1.10.tar.gz#sha256=0340e37b732e184081b150f21bbbd4eed3643ab49f74633b9c4d827bda663235 (from https://pypi.org/simple/starfish/), version: 0.1.10 2019-12-13T19:22:21 Using version 0.1.10 (newest of versions: 0.1.10) 2019-12-13T19:22:21 Created temporary directory: /tmp/pip-unpack-toklilik 2019-12-13T19:22:21 Downloading https://files.pythonhosted.org/packages/be/9b/4215abcd20509c27b2885c6736e4640581d00b36e6e3ac178a53138c8f2e/starfish-0.1.10.tar.gz (233kB) 2019-12-13T19:22:21 Downloading from URL https://files.pythonhosted.org/packages/be/9b/4215abcd20509c27b2885c6736e4640581d00b36e6e3ac178a53138c8f2e/starfish-0.1.10.tar.gz#sha256=0340e37b732e184081b150f21bbbd4eed3643ab49f74633b9c4d827bda663235 (from https://pypi.org/simple/starfish/) 2019-12-13T19:22:22 Added starfish==0.1.10 from https://files.pythonhosted.org/packages/be/9b/4215abcd20509c27b2885c6736e4640581d00b36e6e3ac178a53138c8f2e/starfish-0.1.10.tar.gz#sha256=0340e37b732e184081b150f21bbbd4eed3643ab49f74633b9c4d827bda663235 to build tracker '/tmp/pip-req-tracker-unt7c6zt' 2019-12-13T19:22:22 Running setup.py (path:/tmp/pip-wheel-8gknoa_7/starfish/setup.py) egg_info for package starfish 2019-12-13T19:22:22 Running command python setup.py egg_info 2019-12-13T19:22:24 running egg_info 2019-12-13T19:22:24 creating pip-egg-info/starfish.egg-info 2019-12-13T19:22:24 writing pip-egg-info/starfish.egg-info/PKG-INFO 2019-12-13T19:22:24 writing dependency_links to pip-egg-info/starfish.egg-info/dependency_links.txt 2019-12-13T19:22:24 writing entry points to pip-egg-info/starfish.egg-info/entry_points.txt 2019-12-13T19:22:24 writing requirements to pip-egg-info/starfish.egg-info/requires.txt 2019-12-13T19:22:24 writing top-level names to pip-egg-info/starfish.egg-info/top_level.txt 2019-12-13T19:22:24 writing manifest file 'pip-egg-info/starfish.egg-info/SOURCES.txt' 2019-12-13T19:22:24 reading manifest file 'pip-egg-info/starfish.egg-info/SOURCES.txt' 2019-12-13T19:22:24 reading manifest template 'MANIFEST.in' 2019-12-13T19:22:25 writing manifest file 'pip-egg-info/starfish.egg-info/SOURCES.txt' 2019-12-13T19:22:25 Source in /tmp/pip-wheel-8gknoa_7/starfish has version 0.1.10, which satisfies requirement starfish==0.1.10 from https://files.pythonhosted.org/packages/be/9b/4215abcd20509c27b2885c6736e4640581d00b36e6e3ac178a53138c8f2e/starfish-0.1.10.tar.gz#sha256=0340e37b732e184081b150f21bbbd4eed3643ab49f74633b9c4d827bda663235 2019-12-13T19:22:25 Removed starfish==0.1.10 from https://files.pythonhosted.org/packages/be/9b/4215abcd20509c27b2885c6736e4640581d00b36e6e3ac178a53138c8f2e/starfish-0.1.10.tar.gz#sha256=0340e37b732e184081b150f21bbbd4eed3643ab49f74633b9c4d827bda663235 from build tracker '/tmp/pip-req-tracker-unt7c6zt' 2019-12-13T19:22:25 Building wheels for collected packages: starfish 2019-12-13T19:22:25 Created temporary directory: /tmp/pip-wheel-j5wyt3z1 2019-12-13T19:22:25 Building wheel for starfish (setup.py): started 2019-12-13T19:22:25 Destination directory: /tmp/pip-wheel-j5wyt3z1 2019-12-13T19:22:25 Running command /usr/bin/python3 -u -c 'import setuptools, tokenize;__file__='"'"'/tmp/pip-wheel-8gknoa_7/starfish/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-j5wyt3z1 2019-12-13T19:22:26 running bdist_wheel 2019-12-13T19:22:26 running build 2019-12-13T19:22:26 running build_py 2019-12-13T19:22:26 creating build 2019-12-13T19:22:26 creating build/lib 2019-12-13T19:22:26 creating build/lib/starfish 2019-12-13T19:22:26 copying starfish/__init__.py -> build/lib/starfish 2019-12-13T19:22:26 copying starfish/__main__.py -> build/lib/starfish 2019-12-13T19:22:26 copying starfish/image.py -> build/lib/starfish 2019-12-13T19:22:27 copying starfish/spots.py -> build/lib/starfish 2019-12-13T19:22:27 copying starfish/config.py -> build/lib/starfish 2019-12-13T19:22:27 copying starfish/types.py -> build/lib/starfish 2019-12-13T19:22:27 copying starfish/morphology.py -> build/lib/starfish 2019-12-13T19:22:27 copying starfish/data.py -> build/lib/starfish 2019-12-13T19:22:27 creating build/lib/starfish/util 2019-12-13T19:22:27 copying starfish/util/plot.py -> build/lib/starfish/util 2019-12-13T19:22:27 copying starfish/util/__init__.py -> build/lib/starfish/util 2019-12-13T19:22:27 creating build/lib/starfish/core 2019-12-13T19:22:27 copying starfish/core/_display.py -> build/lib/starfish/core 2019-12-13T19:22:27 copying starfish/core/errors.py -> build/lib/starfish/core 2019-12-13T19:22:27 copying starfish/core/starfish.py -> build/lib/starfish/core 2019-12-13T19:22:27 copying starfish/core/compat.py -> build/lib/starfish/core 2019-12-13T19:22:27 copying starfish/core/_version.py -> build/lib/starfish/core 2019-12-13T19:22:27 copying starfish/core/__init__.py -> build/lib/starfish/core 2019-12-13T19:22:27 creating build/lib/starfish/experiment 2019-12-13T19:22:27 copying starfish/experiment/__init__.py -> build/lib/starfish/experiment 2019-12-13T19:22:27 copying starfish/experiment/builder.py -> build/lib/starfish/experiment 2019-12-13T19:22:27 creating build/lib/starfish/test 2019-12-13T19:22:27 copying starfish/test/__init__.py -> build/lib/starfish/test 2019-12-13T19:22:27 creating build/lib/starfish/core/segmentation_mask 2019-12-13T19:22:27 copying starfish/core/segmentation_mask/__init__.py -> build/lib/starfish/core/segmentation_mask 2019-12-13T19:22:27 copying starfish/core/segmentation_mask/segmentation_mask.py -> build/lib/starfish/core/segmentation_mask 2019-12-13T19:22:27 creating build/lib/starfish/core/morphology 2019-12-13T19:22:27 copying starfish/core/morphology/__init__.py -> build/lib/starfish/core/morphology 2019-12-13T19:22:27 copying starfish/core/morphology/util.py -> build/lib/starfish/core/morphology 2019-12-13T19:22:27 creating build/lib/starfish/core/types 2019-12-13T19:22:27 copying starfish/core/types/_validated_table.py -> build/lib/starfish/core/types 2019-12-13T19:22:27 copying starfish/core/types/_spot_attributes.py -> build/lib/starfish/core/types 2019-12-13T19:22:27 copying starfish/core/types/_decoded_spots.py -> build/lib/starfish/core/types 2019-12-13T19:22:27 copying starfish/core/types/__init__.py -> build/lib/starfish/core/types 2019-12-13T19:22:27 copying starfish/core/types/_constants.py -> build/lib/starfish/core/types 2019-12-13T19:22:27 copying starfish/core/types/_functionsource.py -> build/lib/starfish/core/types 2019-12-13T19:22:27 copying starfish/core/types/_spot_finding_results.py -> build/lib/starfish/core/types 2019-12-13T19:22:27 creating build/lib/starfish/core/util 2019-12-13T19:22:27 copying starfish/core/util/logging.py -> build/lib/starfish/core/util 2019-12-13T19:22:27 copying starfish/core/util/levels.py -> build/lib/starfish/core/util 2019-12-13T19:22:27 copying starfish/core/util/clock.py -> build/lib/starfish/core/util 2019-12-13T19:22:27 copying starfish/core/util/try_import.py -> build/lib/starfish/core/util 2019-12-13T19:22:27 copying starfish/core/util/__init__.py -> build/lib/starfish/core/util 2019-12-13T19:22:27 copying starfish/core/util/enum.py -> build/lib/starfish/core/util 2019-12-13T19:22:27 copying starfish/core/util/argparse.py -> build/lib/starfish/core/util 2019-12-13T19:22:27 copying starfish/core/util/exec.py -> build/lib/starfish/core/util 2019-12-13T19:22:27 copying starfish/core/util/config.py -> build/lib/starfish/core/util 2019-12-13T19:22:27 creating build/lib/starfish/core/image 2019-12-13T19:22:27 copying starfish/core/image/__init__.py -> build/lib/starfish/core/image 2019-12-13T19:22:27 creating build/lib/starfish/core/intensity_table 2019-12-13T19:22:27 copying starfish/core/intensity_table/intensity_table.py -> build/lib/starfish/core/intensity_table 2019-12-13T19:22:27 copying starfish/core/intensity_table/concatenate.py -> build/lib/starfish/core/intensity_table 2019-12-13T19:22:27 copying starfish/core/intensity_table/decoded_intensity_table.py -> build/lib/starfish/core/intensity_table 2019-12-13T19:22:27 copying starfish/core/intensity_table/__init__.py -> build/lib/starfish/core/intensity_table 2019-12-13T19:22:27 copying starfish/core/intensity_table/overlap.py -> build/lib/starfish/core/intensity_table 2019-12-13T19:22:27 copying starfish/core/intensity_table/intensity_table_coordinates.py -> build/lib/starfish/core/intensity_table 2019-12-13T19:22:27 creating build/lib/starfish/core/experiment 2019-12-13T19:22:27 copying starfish/core/experiment/version.py -> build/lib/starfish/core/experiment 2019-12-13T19:22:27 copying starfish/core/experiment/experiment.py -> build/lib/starfish/core/experiment 2019-12-13T19:22:27 copying starfish/core/experiment/__init__.py -> build/lib/starfish/core/experiment 2019-12-13T19:22:27 creating build/lib/starfish/core/expression_matrix 2019-12-13T19:22:27 copying starfish/core/expression_matrix/concatenate.py -> build/lib/starfish/core/expression_matrix 2019-12-13T19:22:27 copying starfish/core/expression_matrix/__init__.py -> build/lib/starfish/core/expression_matrix 2019-12-13T19:22:27 copying starfish/core/expression_matrix/expression_matrix.py -> build/lib/starfish/core/expression_matrix 2019-12-13T19:22:27 creating build/lib/starfish/core/imagestack 2019-12-13T19:22:27 copying starfish/core/imagestack/__init__.py -> build/lib/starfish/core/imagestack 2019-12-13T19:22:27 copying starfish/core/imagestack/physical_coordinates.py -> build/lib/starfish/core/imagestack 2019-12-13T19:22:27 copying starfish/core/imagestack/indexing_utils.py -> build/lib/starfish/core/imagestack 2019-12-13T19:22:27 copying starfish/core/imagestack/dataorder.py -> build/lib/starfish/core/imagestack 2019-12-13T19:22:27 copying starfish/core/imagestack/imagestack.py -> build/lib/starfish/core/imagestack 2019-12-13T19:22:27 creating build/lib/starfish/core/spots 2019-12-13T19:22:27 copying starfish/core/spots/__init__.py -> build/lib/starfish/core/spots 2019-12-13T19:22:27 creating build/lib/starfish/core/config 2019-12-13T19:22:27 copying starfish/core/config/__init__.py -> build/lib/starfish/core/config 2019-12-13T19:22:27 creating build/lib/starfish/core/spacetx_format 2019-12-13T19:22:27 copying starfish/core/spacetx_format/test_codebook.py -> build/lib/starfish/core/spacetx_format 2019-12-13T19:22:27 copying starfish/core/spacetx_format/test_coordinates.py -> build/lib/starfish/core/spacetx_format 2019-12-13T19:22:27 copying starfish/core/spacetx_format/test_fuzz.py -> build/lib/starfish/core/spacetx_format 2019-12-13T19:22:27 copying starfish/core/spacetx_format/test_fov_manifest.py -> build/lib/starfish/core/spacetx_format 2019-12-13T19:22:27 copying starfish/core/spacetx_format/validate_sptx.py -> build/lib/starfish/core/spacetx_format 2019-12-13T19:22:27 copying starfish/core/spacetx_format/__init__.py -> build/lib/starfish/core/spacetx_format 2019-12-13T19:22:27 copying starfish/core/spacetx_format/test_experiment.py -> build/lib/starfish/core/spacetx_format 2019-12-13T19:22:27 copying starfish/core/spacetx_format/test_field_of_view.py -> build/lib/starfish/core/spacetx_format 2019-12-13T19:22:27 copying starfish/core/spacetx_format/cli.py -> build/lib/starfish/core/spacetx_format 2019-12-13T19:22:27 copying starfish/core/spacetx_format/util.py -> build/lib/starfish/core/spacetx_format 2019-12-13T19:22:27 creating build/lib/starfish/core/pipeline 2019-12-13T19:22:27 copying starfish/core/pipeline/algorithmbase.py -> build/lib/starfish/core/pipeline 2019-12-13T19:22:27 copying starfish/core/pipeline/__init__.py -> build/lib/starfish/core/pipeline 2019-12-13T19:22:27 creating build/lib/starfish/core/codebook 2019-12-13T19:22:27 copying starfish/core/codebook/__init__.py -> build/lib/starfish/core/codebook 2019-12-13T19:22:27 copying starfish/core/codebook/codebook.py -> build/lib/starfish/core/codebook 2019-12-13T19:22:27 copying starfish/core/codebook/_format.py -> build/lib/starfish/core/codebook 2019-12-13T19:22:27 creating build/lib/starfish/core/test 2019-12-13T19:22:27 copying starfish/core/test/test_multiprocessing_workflow.py -> build/lib/starfish/core/test 2019-12-13T19:22:27 copying starfish/core/test/test_display.py -> build/lib/starfish/core/test 2019-12-13T19:22:27 copying starfish/core/test/__init__.py -> build/lib/starfish/core/test 2019-12-13T19:22:27 copying starfish/core/test/test_synthetic_spot_creation.py -> build/lib/starfish/core/test 2019-12-13T19:22:27 copying starfish/core/test/factories.py -> build/lib/starfish/core/test 2019-12-13T19:22:27 creating build/lib/starfish/core/morphology/Filter 2019-12-13T19:22:27 copying starfish/core/morphology/Filter/min_distance_label.py -> build/lib/starfish/core/morphology/Filter 2019-12-13T19:22:27 copying starfish/core/morphology/Filter/map.py -> build/lib/starfish/core/morphology/Filter 2019-12-13T19:22:27 copying starfish/core/morphology/Filter/structural_label.py -> build/lib/starfish/core/morphology/Filter 2019-12-13T19:22:27 copying starfish/core/morphology/Filter/__init__.py -> build/lib/starfish/core/morphology/Filter 2019-12-13T19:22:27 copying starfish/core/morphology/Filter/_base.py -> build/lib/starfish/core/morphology/Filter 2019-12-13T19:22:27 copying starfish/core/morphology/Filter/areafilter.py -> build/lib/starfish/core/morphology/Filter 2019-12-13T19:22:27 creating build/lib/starfish/core/morphology/binary_mask 2019-12-13T19:22:27 copying starfish/core/morphology/binary_mask/binary_mask.py -> build/lib/starfish/core/morphology/binary_mask 2019-12-13T19:22:27 copying starfish/core/morphology/binary_mask/expand.py -> build/lib/starfish/core/morphology/binary_mask 2019-12-13T19:22:27 copying starfish/core/morphology/binary_mask/__init__.py -> build/lib/starfish/core/morphology/binary_mask 2019-12-13T19:22:27 copying starfish/core/morphology/binary_mask/_io.py -> build/lib/starfish/core/morphology/binary_mask 2019-12-13T19:22:27 creating build/lib/starfish/core/morphology/Binarize 2019-12-13T19:22:27 copying starfish/core/morphology/Binarize/threshold.py -> build/lib/starfish/core/morphology/Binarize 2019-12-13T19:22:27 copying starfish/core/morphology/Binarize/__init__.py -> build/lib/starfish/core/morphology/Binarize 2019-12-13T19:22:27 copying starfish/core/morphology/Binarize/_base.py -> build/lib/starfish/core/morphology/Binarize 2019-12-13T19:22:27 creating build/lib/starfish/core/morphology/label_image 2019-12-13T19:22:27 copying starfish/core/morphology/label_image/label_image.py -> build/lib/starfish/core/morphology/label_image 2019-12-13T19:22:27 copying starfish/core/morphology/label_image/__init__.py -> build/lib/starfish/core/morphology/label_image 2019-12-13T19:22:27 creating build/lib/starfish/core/morphology/Filter/test 2019-12-13T19:22:27 copying starfish/core/morphology/Filter/test/__init__.py -> build/lib/starfish/core/morphology/Filter/test 2019-12-13T19:22:27 copying starfish/core/morphology/Filter/test/test_areafilter.py -> build/lib/starfish/core/morphology/Filter/test 2019-12-13T19:22:27 copying starfish/core/morphology/Filter/test/test_map.py -> build/lib/starfish/core/morphology/Filter/test 2019-12-13T19:22:27 creating build/lib/starfish/core/morphology/binary_mask/test 2019-12-13T19:22:27 copying starfish/core/morphology/binary_mask/test/test_expand.py -> build/lib/starfish/core/morphology/binary_mask/test 2019-12-13T19:22:27 copying starfish/core/morphology/binary_mask/test/test_binary_mask.py -> build/lib/starfish/core/morphology/binary_mask/test 2019-12-13T19:22:27 copying starfish/core/morphology/binary_mask/test/test_from_binary_arrays_and_ticks.py -> build/lib/starfish/core/morphology/binary_mask/test 2019-12-13T19:22:27 copying starfish/core/morphology/binary_mask/test/__init__.py -> build/lib/starfish/core/morphology/binary_mask/test 2019-12-13T19:22:27 copying starfish/core/morphology/binary_mask/test/test_from_label_array_and_ticks.py -> build/lib/starfish/core/morphology/binary_mask/test 2019-12-13T19:22:27 copying starfish/core/morphology/binary_mask/test/factories.py -> build/lib/starfish/core/morphology/binary_mask/test 2019-12-13T19:22:27 creating build/lib/starfish/core/morphology/Binarize/test 2019-12-13T19:22:27 copying starfish/core/morphology/Binarize/test/__init__.py -> build/lib/starfish/core/morphology/Binarize/test 2019-12-13T19:22:27 copying starfish/core/morphology/Binarize/test/test_threshold.py -> build/lib/starfish/core/morphology/Binarize/test 2019-12-13T19:22:27 creating build/lib/starfish/core/morphology/label_image/test 2019-12-13T19:22:27 copying starfish/core/morphology/label_image/test/test_label_image.py -> build/lib/starfish/core/morphology/label_image/test 2019-12-13T19:22:27 copying starfish/core/morphology/label_image/test/__init__.py -> build/lib/starfish/core/morphology/label_image/test 2019-12-13T19:22:27 creating build/lib/starfish/core/types/test 2019-12-13T19:22:27 copying starfish/core/types/test/test_decoded_spots.py -> build/lib/starfish/core/types/test 2019-12-13T19:22:27 copying starfish/core/types/test/__init__.py -> build/lib/starfish/core/types/test 2019-12-13T19:22:27 creating build/lib/starfish/core/util/test 2019-12-13T19:22:27 copying starfish/core/util/test/test_levels.py -> build/lib/starfish/core/util/test 2019-12-13T19:22:27 copying starfish/core/util/test/__init__.py -> build/lib/starfish/core/util/test 2019-12-13T19:22:27 copying starfish/core/util/test/test_preserve_float_range.py -> build/lib/starfish/core/util/test 2019-12-13T19:22:27 creating build/lib/starfish/core/util/click 2019-12-13T19:22:27 copying starfish/core/util/click/__init__.py -> build/lib/starfish/core/util/click 2019-12-13T19:22:27 creating build/lib/starfish/core/image/Filter 2019-12-13T19:22:27 copying starfish/core/image/Filter/clip_value_to_zero.py -> build/lib/starfish/core/image/Filter 2019-12-13T19:22:27 copying starfish/core/image/Filter/gaussian_low_pass.py -> build/lib/starfish/core/image/Filter 2019-12-13T19:22:27 copying starfish/core/image/Filter/clip.py -> build/lib/starfish/core/image/Filter 2019-12-13T19:22:27 copying starfish/core/image/Filter/map.py -> build/lib/starfish/core/image/Filter 2019-12-13T19:22:27 copying starfish/core/image/Filter/bandpass.py -> build/lib/starfish/core/image/Filter 2019-12-13T19:22:27 copying starfish/core/image/Filter/richardson_lucy_deconvolution.py -> build/lib/starfish/core/image/Filter 2019-12-13T19:22:27 copying starfish/core/image/Filter/mean_high_pass.py -> build/lib/starfish/core/image/Filter 2019-12-13T19:22:27 copying starfish/core/image/Filter/element_wise_mult.py -> build/lib/starfish/core/image/Filter 2019-12-13T19:22:27 copying starfish/core/image/Filter/__init__.py -> build/lib/starfish/core/image/Filter 2019-12-13T19:22:27 copying starfish/core/image/Filter/call_bases.py -> build/lib/starfish/core/image/Filter 2019-12-13T19:22:27 copying starfish/core/image/Filter/laplace.py -> build/lib/starfish/core/image/Filter 2019-12-13T19:22:27 copying starfish/core/image/Filter/_base.py -> build/lib/starfish/core/image/Filter 2019-12-13T19:22:27 copying starfish/core/image/Filter/white_tophat.py -> build/lib/starfish/core/image/Filter 2019-12-13T19:22:27 copying starfish/core/image/Filter/zero_by_channel_magnitude.py -> build/lib/starfish/core/image/Filter 2019-12-13T19:22:27 copying starfish/core/image/Filter/reduce.py -> build/lib/starfish/core/image/Filter 2019-12-13T19:22:27 copying starfish/core/image/Filter/linear_unmixing.py -> build/lib/starfish/core/image/Filter 2019-12-13T19:22:27 copying starfish/core/image/Filter/gaussian_high_pass.py -> build/lib/starfish/core/image/Filter 2019-12-13T19:22:27 copying starfish/core/image/Filter/match_histograms.py -> build/lib/starfish/core/image/Filter 2019-12-13T19:22:27 copying starfish/core/image/Filter/clip_percentile_to_zero.py -> build/lib/starfish/core/image/Filter 2019-12-13T19:22:27 copying starfish/core/image/Filter/util.py -> build/lib/starfish/core/image/Filter 2019-12-13T19:22:27 creating build/lib/starfish/core/image/_registration 2019-12-13T19:22:27 copying starfish/core/image/_registration/transforms_list.py -> build/lib/starfish/core/image/_registration 2019-12-13T19:22:27 copying starfish/core/image/_registration/__init__.py -> build/lib/starfish/core/image/_registration 2019-12-13T19:22:27 copying starfish/core/image/_registration/_format.py -> build/lib/starfish/core/image/_registration 2019-12-13T19:22:27 creating build/lib/starfish/core/image/Segment 2019-12-13T19:22:27 copying starfish/core/image/Segment/watershed.py -> build/lib/starfish/core/image/Segment 2019-12-13T19:22:27 copying starfish/core/image/Segment/__init__.py -> build/lib/starfish/core/image/Segment 2019-12-13T19:22:27 copying starfish/core/image/Segment/_base.py -> build/lib/starfish/core/image/Segment 2019-12-13T19:22:27 creating build/lib/starfish/core/image/Filter/test 2019-12-13T19:22:27 copying starfish/core/image/Filter/test/test_histogram_matching.py -> build/lib/starfish/core/image/Filter/test 2019-12-13T19:22:27 copying starfish/core/image/Filter/test/test_zero_by_channel_magnitude.py -> build/lib/starfish/core/image/Filter/test 2019-12-13T19:22:27 copying starfish/core/image/Filter/test/test_filter.py -> build/lib/starfish/core/image/Filter/test 2019-12-13T19:22:27 copying starfish/core/image/Filter/test/test_api_contract.py -> build/lib/starfish/core/image/Filter/test 2019-12-13T19:22:27 copying starfish/core/image/Filter/test/__init__.py -> build/lib/starfish/core/image/Filter/test 2019-12-13T19:22:27 copying starfish/core/image/Filter/test/test_linear_unmixing.py -> build/lib/starfish/core/image/Filter/test 2019-12-13T19:22:27 copying starfish/core/image/Filter/test/test_map.py -> build/lib/starfish/core/image/Filter/test 2019-12-13T19:22:27 copying starfish/core/image/Filter/test/test_call_bases.py -> build/lib/starfish/core/image/Filter/test 2019-12-13T19:22:27 copying starfish/core/image/Filter/test/test_white_tophat.py -> build/lib/starfish/core/image/Filter/test 2019-12-13T19:22:27 copying starfish/core/image/Filter/test/test_reduce.py -> build/lib/starfish/core/image/Filter/test 2019-12-13T19:22:27 creating build/lib/starfish/core/image/_registration/LearnTransform 2019-12-13T19:22:27 copying starfish/core/image/_registration/LearnTransform/translation.py -> build/lib/starfish/core/image/_registration/LearnTransform 2019-12-13T19:22:27 copying starfish/core/image/_registration/LearnTransform/__init__.py -> build/lib/starfish/core/image/_registration/LearnTransform 2019-12-13T19:22:27 copying starfish/core/image/_registration/LearnTransform/_base.py -> build/lib/starfish/core/image/_registration/LearnTransform 2019-12-13T19:22:27 creating build/lib/starfish/core/image/_registration/test 2019-12-13T19:22:27 copying starfish/core/image/_registration/test/test_transforms_list.py -> build/lib/starfish/core/image/_registration/test 2019-12-13T19:22:27 copying starfish/core/image/_registration/test/__init__.py -> build/lib/starfish/core/image/_registration/test 2019-12-13T19:22:27 creating build/lib/starfish/core/image/_registration/ApplyTransform 2019-12-13T19:22:27 copying starfish/core/image/_registration/ApplyTransform/__init__.py -> build/lib/starfish/core/image/_registration/ApplyTransform 2019-12-13T19:22:27 copying starfish/core/image/_registration/ApplyTransform/_base.py -> build/lib/starfish/core/image/_registration/ApplyTransform 2019-12-13T19:22:27 copying starfish/core/image/_registration/ApplyTransform/warp.py -> build/lib/starfish/core/image/_registration/ApplyTransform 2019-12-13T19:22:27 creating build/lib/starfish/core/image/_registration/LearnTransform/test 2019-12-13T19:22:27 copying starfish/core/image/_registration/LearnTransform/test/test_translation.py -> build/lib/starfish/core/image/_registration/LearnTransform/test 2019-12-13T19:22:27 copying starfish/core/image/_registration/LearnTransform/test/__init__.py -> build/lib/starfish/core/image/_registration/LearnTransform/test 2019-12-13T19:22:27 creating build/lib/starfish/core/image/_registration/ApplyTransform/test 2019-12-13T19:22:27 copying starfish/core/image/_registration/ApplyTransform/test/test_warp.py -> build/lib/starfish/core/image/_registration/ApplyTransform/test 2019-12-13T19:22:27 copying starfish/core/image/_registration/ApplyTransform/test/__init__.py -> build/lib/starfish/core/image/_registration/ApplyTransform/test 2019-12-13T19:22:27 creating build/lib/starfish/core/intensity_table/test 2019-12-13T19:22:27 copying starfish/core/intensity_table/test/test_from_imagestack.py -> build/lib/starfish/core/intensity_table/test 2019-12-13T19:22:27 copying starfish/core/intensity_table/test/test_overlap.py -> build/lib/starfish/core/intensity_table/test 2019-12-13T19:22:27 copying starfish/core/intensity_table/test/test_intensity_table_coords.py -> build/lib/starfish/core/intensity_table/test 2019-12-13T19:22:27 copying starfish/core/intensity_table/test/test_intensity_table_serialization.py -> build/lib/starfish/core/intensity_table/test 2019-12-13T19:22:27 copying starfish/core/intensity_table/test/test_empty_intensity_table.py -> build/lib/starfish/core/intensity_table/test 2019-12-13T19:22:27 copying starfish/core/intensity_table/test/test_from_spot_data.py -> build/lib/starfish/core/intensity_table/test 2019-12-13T19:22:27 copying starfish/core/intensity_table/test/test_concatenate.py -> build/lib/starfish/core/intensity_table/test 2019-12-13T19:22:27 copying starfish/core/intensity_table/test/__init__.py -> build/lib/starfish/core/intensity_table/test 2019-12-13T19:22:27 copying starfish/core/intensity_table/test/test_to_mermaid.py -> build/lib/starfish/core/intensity_table/test 2019-12-13T19:22:27 copying starfish/core/intensity_table/test/test_stack_intensity_table_reshaping.py -> build/lib/starfish/core/intensity_table/test 2019-12-13T19:22:27 copying starfish/core/intensity_table/test/test_synthetic_intensities.py -> build/lib/starfish/core/intensity_table/test 2019-12-13T19:22:27 copying starfish/core/intensity_table/test/factories.py -> build/lib/starfish/core/intensity_table/test 2019-12-13T19:22:27 creating build/lib/starfish/core/experiment/builder 2019-12-13T19:22:27 copying starfish/core/experiment/builder/structured_formatter.py -> build/lib/starfish/core/experiment/builder 2019-12-13T19:22:27 copying starfish/core/experiment/builder/defaultproviders.py -> build/lib/starfish/core/experiment/builder 2019-12-13T19:22:27 copying starfish/core/experiment/builder/providers.py -> build/lib/starfish/core/experiment/builder 2019-12-13T19:22:27 copying starfish/core/experiment/builder/__init__.py -> build/lib/starfish/core/experiment/builder 2019-12-13T19:22:27 copying starfish/core/experiment/builder/inplace.py -> build/lib/starfish/core/experiment/builder 2019-12-13T19:22:27 copying starfish/core/experiment/builder/orderediterator.py -> build/lib/starfish/core/experiment/builder 2019-12-13T19:22:27 creating build/lib/starfish/core/experiment/test 2019-12-13T19:22:27 copying starfish/core/experiment/test/__init__.py -> build/lib/starfish/core/experiment/test 2019-12-13T19:22:27 copying starfish/core/experiment/test/test_experiment.py -> build/lib/starfish/core/experiment/test 2019-12-13T19:22:27 copying starfish/core/experiment/test/test_version.py -> build/lib/starfish/core/experiment/test 2019-12-13T19:22:27 creating build/lib/starfish/core/experiment/builder/test 2019-12-13T19:22:27 copying starfish/core/experiment/builder/test/test_small_axis.py -> build/lib/starfish/core/experiment/builder/test 2019-12-13T19:22:27 copying starfish/core/experiment/builder/test/__init__.py -> build/lib/starfish/core/experiment/builder/test 2019-12-13T19:22:27 copying starfish/core/experiment/builder/test/test_orderediterator.py -> build/lib/starfish/core/experiment/builder/test 2019-12-13T19:22:27 copying starfish/core/experiment/builder/test/test_inplace.py -> build/lib/starfish/core/experiment/builder/test 2019-12-13T19:22:27 creating build/lib/starfish/core/experiment/builder/test/factories 2019-12-13T19:22:27 copying starfish/core/experiment/builder/test/factories/unique_tiles.py -> build/lib/starfish/core/experiment/builder/test/factories 2019-12-13T19:22:27 copying starfish/core/experiment/builder/test/factories/all_purpose.py -> build/lib/starfish/core/experiment/builder/test/factories 2019-12-13T19:22:27 copying starfish/core/experiment/builder/test/factories/__init__.py -> build/lib/starfish/core/experiment/builder/test/factories 2019-12-13T19:22:27 creating build/lib/starfish/core/experiment/builder/test/structured_formatter 2019-12-13T19:22:27 copying starfish/core/experiment/builder/test/structured_formatter/test_tilepath.py -> build/lib/starfish/core/experiment/builder/test/structured_formatter 2019-12-13T19:22:27 copying starfish/core/experiment/builder/test/structured_formatter/test_single_fov.py -> build/lib/starfish/core/experiment/builder/test/structured_formatter 2019-12-13T19:22:27 copying starfish/core/experiment/builder/test/structured_formatter/test_multiple_fov.py -> build/lib/starfish/core/experiment/builder/test/structured_formatter 2019-12-13T19:22:27 copying starfish/core/experiment/builder/test/structured_formatter/__init__.py -> build/lib/starfish/core/experiment/builder/test/structured_formatter 2019-12-13T19:22:27 copying starfish/core/experiment/builder/test/structured_formatter/util.py -> build/lib/starfish/core/experiment/builder/test/structured_formatter 2019-12-13T19:22:27 creating build/lib/starfish/core/expression_matrix/test 2019-12-13T19:22:27 copying starfish/core/expression_matrix/test/test_concatenate.py -> build/lib/starfish/core/expression_matrix/test 2019-12-13T19:22:27 copying starfish/core/expression_matrix/test/__init__.py -> build/lib/starfish/core/expression_matrix/test 2019-12-13T19:22:27 copying starfish/core/expression_matrix/test/test_serialization.py -> build/lib/starfish/core/expression_matrix/test 2019-12-13T19:22:27 creating build/lib/starfish/core/imagestack/parser 2019-12-13T19:22:27 copying starfish/core/imagestack/parser/_tiledata.py -> build/lib/starfish/core/imagestack/parser 2019-12-13T19:22:27 copying starfish/core/imagestack/parser/__init__.py -> build/lib/starfish/core/imagestack/parser 2019-12-13T19:22:27 copying starfish/core/imagestack/parser/_key.py -> build/lib/starfish/core/imagestack/parser 2019-12-13T19:22:27 copying starfish/core/imagestack/parser/crop.py -> build/lib/starfish/core/imagestack/parser 2019-12-13T19:22:27 creating build/lib/starfish/core/imagestack/test 2019-12-13T19:22:27 copying starfish/core/imagestack/test/test_coordinates.py -> build/lib/starfish/core/imagestack/test 2019-12-13T19:22:27 copying starfish/core/imagestack/test/test_labeled_indices.py -> build/lib/starfish/core/imagestack/test 2019-12-13T19:22:27 copying starfish/core/imagestack/test/test_cropped_load.py -> build/lib/starfish/core/imagestack/test 2019-12-13T19:22:27 copying starfish/core/imagestack/test/test_from_numpy_array.py -> build/lib/starfish/core/imagestack/test 2019-12-13T19:22:27 copying starfish/core/imagestack/test/test_index.py -> build/lib/starfish/core/imagestack/test 2019-12-13T19:22:27 copying starfish/core/imagestack/test/test_apply.py -> build/lib/starfish/core/imagestack/test 2019-12-13T19:22:27 copying starfish/core/imagestack/test/__init__.py -> build/lib/starfish/core/imagestack/test 2019-12-13T19:22:27 copying starfish/core/imagestack/test/test_physical_coordinate_calculator.py -> build/lib/starfish/core/imagestack/test 2019-12-13T19:22:27 copying starfish/core/imagestack/test/test_export.py -> build/lib/starfish/core/imagestack/test 2019-12-13T19:22:27 copying starfish/core/imagestack/test/imagestack_test_utils.py -> build/lib/starfish/core/imagestack/test 2019-12-13T19:22:27 copying starfish/core/imagestack/test/test_slicedimage_dtype.py -> build/lib/starfish/core/imagestack/test 2019-12-13T19:22:28 copying starfish/core/imagestack/test/test_max_proj.py -> build/lib/starfish/core/imagestack/test 2019-12-13T19:22:28 copying starfish/core/imagestack/test/test_metadata.py -> build/lib/starfish/core/imagestack/test 2019-12-13T19:22:28 copying starfish/core/imagestack/test/test_slice_ops.py -> build/lib/starfish/core/imagestack/test 2019-12-13T19:22:28 creating build/lib/starfish/core/imagestack/parser/tileset 2019-12-13T19:22:28 copying starfish/core/imagestack/parser/tileset/_parser.py -> build/lib/starfish/core/imagestack/parser/tileset 2019-12-13T19:22:28 copying starfish/core/imagestack/parser/tileset/__init__.py -> build/lib/starfish/core/imagestack/parser/tileset 2019-12-13T19:22:28 creating build/lib/starfish/core/imagestack/parser/numpy 2019-12-13T19:22:28 copying starfish/core/imagestack/parser/numpy/__init__.py -> build/lib/starfish/core/imagestack/parser/numpy 2019-12-13T19:22:28 creating build/lib/starfish/core/imagestack/test/factories 2019-12-13T19:22:28 copying starfish/core/imagestack/test/factories/unique_tiles.py -> build/lib/starfish/core/imagestack/test/factories 2019-12-13T19:22:28 copying starfish/core/imagestack/test/factories/all_purpose.py -> build/lib/starfish/core/imagestack/test/factories 2019-12-13T19:22:28 copying starfish/core/imagestack/test/factories/__init__.py -> build/lib/starfish/core/imagestack/test/factories 2019-12-13T19:22:28 copying starfish/core/imagestack/test/factories/with_coords.py -> build/lib/starfish/core/imagestack/test/factories 2019-12-13T19:22:28 copying starfish/core/imagestack/test/factories/synthetic_stack.py -> build/lib/starfish/core/imagestack/test/factories 2019-12-13T19:22:28 copying starfish/core/imagestack/test/factories/from_codebook.py -> build/lib/starfish/core/imagestack/test/factories 2019-12-13T19:22:28 creating build/lib/starfish/core/spots/AssignTargets 2019-12-13T19:22:28 copying starfish/core/spots/AssignTargets/label.py -> build/lib/starfish/core/spots/AssignTargets 2019-12-13T19:22:28 copying starfish/core/spots/AssignTargets/__init__.py -> build/lib/starfish/core/spots/AssignTargets 2019-12-13T19:22:28 copying starfish/core/spots/AssignTargets/_base.py -> build/lib/starfish/core/spots/AssignTargets 2019-12-13T19:22:28 creating build/lib/starfish/core/spots/DetectPixels 2019-12-13T19:22:28 copying starfish/core/spots/DetectPixels/combine_adjacent_features.py -> build/lib/starfish/core/spots/DetectPixels 2019-12-13T19:22:28 copying starfish/core/spots/DetectPixels/__init__.py -> build/lib/starfish/core/spots/DetectPixels 2019-12-13T19:22:28 copying starfish/core/spots/DetectPixels/_base.py -> build/lib/starfish/core/spots/DetectPixels 2019-12-13T19:22:28 copying starfish/core/spots/DetectPixels/pixel_spot_decoder.py -> build/lib/starfish/core/spots/DetectPixels 2019-12-13T19:22:28 creating build/lib/starfish/core/spots/DecodeSpots 2019-12-13T19:22:28 copying starfish/core/spots/DecodeSpots/metric_decoder.py -> build/lib/starfish/core/spots/DecodeSpots 2019-12-13T19:22:28 copying starfish/core/spots/DecodeSpots/per_round_max_channel_decoder.py -> build/lib/starfish/core/spots/DecodeSpots 2019-12-13T19:22:28 copying starfish/core/spots/DecodeSpots/trace_builders.py -> build/lib/starfish/core/spots/DecodeSpots 2019-12-13T19:22:28 copying starfish/core/spots/DecodeSpots/simple_lookup_decoder.py -> build/lib/starfish/core/spots/DecodeSpots 2019-12-13T19:22:28 copying starfish/core/spots/DecodeSpots/__init__.py -> build/lib/starfish/core/spots/DecodeSpots 2019-12-13T19:22:28 copying starfish/core/spots/DecodeSpots/_base.py -> build/lib/starfish/core/spots/DecodeSpots 2019-12-13T19:22:28 copying starfish/core/spots/DecodeSpots/util.py -> build/lib/starfish/core/spots/DecodeSpots 2019-12-13T19:22:28 creating build/lib/starfish/core/spots/FindSpots 2019-12-13T19:22:28 copying starfish/core/spots/FindSpots/trackpy_local_max_peak_finder.py -> build/lib/starfish/core/spots/FindSpots 2019-12-13T19:22:28 copying starfish/core/spots/FindSpots/local_max_peak_finder.py -> build/lib/starfish/core/spots/FindSpots 2019-12-13T19:22:28 copying starfish/core/spots/FindSpots/__init__.py -> build/lib/starfish/core/spots/FindSpots 2019-12-13T19:22:28 copying starfish/core/spots/FindSpots/_base.py -> build/lib/starfish/core/spots/FindSpots 2019-12-13T19:22:28 copying starfish/core/spots/FindSpots/blob.py -> build/lib/starfish/core/spots/FindSpots 2019-12-13T19:22:28 copying starfish/core/spots/FindSpots/spot_finding_utils.py -> build/lib/starfish/core/spots/FindSpots 2019-12-13T19:22:28 creating build/lib/starfish/core/spots/DetectPixels/test 2019-12-13T19:22:28 copying starfish/core/spots/DetectPixels/test/test_targets_map.py -> build/lib/starfish/core/spots/DetectPixels/test 2019-12-13T19:22:28 copying starfish/core/spots/DetectPixels/test/test_intensities_to_decoded_image.py -> build/lib/starfish/core/spots/DetectPixels/test 2019-12-13T19:22:28 copying starfish/core/spots/DetectPixels/test/test_calculate_mean_pixel_traces.py -> build/lib/starfish/core/spots/DetectPixels/test 2019-12-13T19:22:28 copying starfish/core/spots/DetectPixels/test/__init__.py -> build/lib/starfish/core/spots/DetectPixels/test 2019-12-13T19:22:28 copying starfish/core/spots/DetectPixels/test/test_create_spot_attributes.py -> build/lib/starfish/core/spots/DetectPixels/test 2019-12-13T19:22:28 creating build/lib/starfish/core/spots/DecodeSpots/test 2019-12-13T19:22:28 copying starfish/core/spots/DecodeSpots/test/test_trace_builders.py -> build/lib/starfish/core/spots/DecodeSpots/test 2019-12-13T19:22:28 copying starfish/core/spots/DecodeSpots/test/test_decoding_without_spots.py -> build/lib/starfish/core/spots/DecodeSpots/test 2019-12-13T19:22:28 copying starfish/core/spots/DecodeSpots/test/test_nearest_neighbor_trace_builder.py -> build/lib/starfish/core/spots/DecodeSpots/test 2019-12-13T19:22:28 copying starfish/core/spots/DecodeSpots/test/__init__.py -> build/lib/starfish/core/spots/DecodeSpots/test 2019-12-13T19:22:28 copying starfish/core/spots/DecodeSpots/test/test_composite_codebook.py -> build/lib/starfish/core/spots/DecodeSpots/test 2019-12-13T19:22:28 creating build/lib/starfish/core/spots/FindSpots/test 2019-12-13T19:22:28 copying starfish/core/spots/FindSpots/test/test_spot_detection.py -> build/lib/starfish/core/spots/FindSpots/test 2019-12-13T19:22:28 copying starfish/core/spots/FindSpots/test/__init__.py -> build/lib/starfish/core/spots/FindSpots/test 2019-12-13T19:22:28 copying starfish/core/spots/FindSpots/test/test_synthetic_data.py -> build/lib/starfish/core/spots/FindSpots/test 2019-12-13T19:22:28 creating build/lib/starfish/core/config/test 2019-12-13T19:22:28 copying starfish/core/config/test/__init__.py -> build/lib/starfish/core/config/test 2019-12-13T19:22:28 copying starfish/core/config/test/test_config.py -> build/lib/starfish/core/config/test 2019-12-13T19:22:28 creating build/lib/starfish/core/codebook/test 2019-12-13T19:22:28 copying starfish/core/codebook/test/test_per_round_max_decode.py -> build/lib/starfish/core/codebook/test 2019-12-13T19:22:28 copying starfish/core/codebook/test/test_to_json.py -> build/lib/starfish/core/codebook/test 2019-12-13T19:22:28 copying starfish/core/codebook/test/test_normalize_code_traces.py -> build/lib/starfish/core/codebook/test 2019-12-13T19:22:28 copying starfish/core/codebook/test/test_approximate_nearest_code.py -> build/lib/starfish/core/codebook/test 2019-12-13T19:22:28 copying starfish/core/codebook/test/__init__.py -> build/lib/starfish/core/codebook/test 2019-12-13T19:22:28 copying starfish/core/codebook/test/test_from_code_array.py -> build/lib/starfish/core/codebook/test 2019-12-13T19:22:28 copying starfish/core/codebook/test/test_code_length.py -> build/lib/starfish/core/codebook/test 2019-12-13T19:22:28 copying starfish/core/codebook/test/test_synthetic_one_hot_codebook.py -> build/lib/starfish/core/codebook/test 2019-12-13T19:22:28 copying starfish/core/codebook/test/test_metric_decode.py -> build/lib/starfish/core/codebook/test 2019-12-13T19:22:28 copying starfish/core/codebook/test/factories.py -> build/lib/starfish/core/codebook/test 2019-12-13T19:22:28 creating build/lib/starfish/test/full_pipelines 2019-12-13T19:22:28 copying starfish/test/full_pipelines/__init__.py -> build/lib/starfish/test/full_pipelines 2019-12-13T19:22:28 creating build/lib/starfish/test/full_pipelines/api 2019-12-13T19:22:28 copying starfish/test/full_pipelines/api/test_dartfish.py -> build/lib/starfish/test/full_pipelines/api 2019-12-13T19:22:28 copying starfish/test/full_pipelines/api/test_iss_api.py -> build/lib/starfish/test/full_pipelines/api 2019-12-13T19:22:28 copying starfish/test/full_pipelines/api/test_allen_smFISH.py -> build/lib/starfish/test/full_pipelines/api 2019-12-13T19:22:28 copying starfish/test/full_pipelines/api/__init__.py -> build/lib/starfish/test/full_pipelines/api 2019-12-13T19:22:28 copying starfish/test/full_pipelines/api/test_merfish.py -> build/lib/starfish/test/full_pipelines/api 2019-12-13T19:22:28 copying starfish/test/full_pipelines/api/test_iss_doc_pipeline.py -> build/lib/starfish/test/full_pipelines/api 2019-12-13T19:22:28 running egg_info 2019-12-13T19:22:28 writing starfish.egg-info/PKG-INFO 2019-12-13T19:22:28 writing dependency_links to starfish.egg-info/dependency_links.txt 2019-12-13T19:22:28 writing entry points to starfish.egg-info/entry_points.txt 2019-12-13T19:22:28 writing requirements to starfish.egg-info/requires.txt 2019-12-13T19:22:28 writing top-level names to starfish.egg-info/top_level.txt 2019-12-13T19:22:28 reading manifest file 'starfish.egg-info/SOURCES.txt' 2019-12-13T19:22:28 reading manifest template 'MANIFEST.in' 2019-12-13T19:22:28 writing manifest file 'starfish.egg-info/SOURCES.txt' 2019-12-13T19:22:28 copying starfish/REQUIREMENTS-STRICT.txt -> build/lib/starfish 2019-12-13T19:22:28 creating build/lib/starfish/spacetx_format 2019-12-13T19:22:28 creating build/lib/starfish/spacetx_format/examples 2019-12-13T19:22:28 creating build/lib/starfish/spacetx_format/examples/codebook 2019-12-13T19:22:28 copying starfish/spacetx_format/examples/codebook/codebook.json -> build/lib/starfish/spacetx_format/examples/codebook 2019-12-13T19:22:28 copying starfish/spacetx_format/examples/codebook/codebook_diagonal.json -> build/lib/starfish/spacetx_format/examples/codebook 2019-12-13T19:22:28 copying starfish/spacetx_format/examples/codebook/codebook_diagonal_inferred_value.json -> build/lib/starfish/spacetx_format/examples/codebook 2019-12-13T19:22:28 creating build/lib/starfish/spacetx_format/examples/experiment 2019-12-13T19:22:28 copying starfish/spacetx_format/examples/experiment/dartfish_experiment.json -> build/lib/starfish/spacetx_format/examples/experiment 2019-12-13T19:22:28 copying starfish/spacetx_format/examples/experiment/experiment.json -> build/lib/starfish/spacetx_format/examples/experiment 2019-12-13T19:22:28 copying starfish/spacetx_format/examples/experiment/no_fov_manifest.json -> build/lib/starfish/spacetx_format/examples/experiment 2019-12-13T19:22:28 creating build/lib/starfish/spacetx_format/examples/field_of_view 2019-12-13T19:22:28 copying starfish/spacetx_format/examples/field_of_view/coordinates_bad_x_scalar.json -> build/lib/starfish/spacetx_format/examples/field_of_view 2019-12-13T19:22:28 copying starfish/spacetx_format/examples/field_of_view/coordinates_bad_x_single.json -> build/lib/starfish/spacetx_format/examples/field_of_view 2019-12-13T19:22:28 copying starfish/spacetx_format/examples/field_of_view/coordinates_bad_y_scalar.json -> build/lib/starfish/spacetx_format/examples/field_of_view 2019-12-13T19:22:28 copying starfish/spacetx_format/examples/field_of_view/coordinates_bad_y_single.json -> build/lib/starfish/spacetx_format/examples/field_of_view 2019-12-13T19:22:28 copying starfish/spacetx_format/examples/field_of_view/coordinates_bad_z_single.json -> build/lib/starfish/spacetx_format/examples/field_of_view 2019-12-13T19:22:28 copying starfish/spacetx_format/examples/field_of_view/coordinates_bad_z_triple.json -> build/lib/starfish/spacetx_format/examples/field_of_view 2019-12-13T19:22:28 copying starfish/spacetx_format/examples/field_of_view/coordinates_good_max.json -> build/lib/starfish/spacetx_format/examples/field_of_view 2019-12-13T19:22:28 copying starfish/spacetx_format/examples/field_of_view/coordinates_good_min.json -> build/lib/starfish/spacetx_format/examples/field_of_view 2019-12-13T19:22:28 copying starfish/spacetx_format/examples/field_of_view/dartfish_field_of_view.json -> build/lib/starfish/spacetx_format/examples/field_of_view 2019-12-13T19:22:28 copying starfish/spacetx_format/examples/field_of_view/dartfish_nuclei.json -> build/lib/starfish/spacetx_format/examples/field_of_view 2019-12-13T19:22:28 copying starfish/spacetx_format/examples/field_of_view/field_of_view.json -> build/lib/starfish/spacetx_format/examples/field_of_view 2019-12-13T19:22:28 copying starfish/spacetx_format/examples/field_of_view/too_large.json -> build/lib/starfish/spacetx_format/examples/field_of_view 2019-12-13T19:22:28 creating build/lib/starfish/spacetx_format/examples/fov_manifest 2019-12-13T19:22:28 copying starfish/spacetx_format/examples/fov_manifest/fov_manifest.json -> build/lib/starfish/spacetx_format/examples/fov_manifest 2019-12-13T19:22:28 creating build/lib/starfish/spacetx_format/schema 2019-12-13T19:22:28 copying starfish/spacetx_format/schema/experiment_4.0.0.json -> build/lib/starfish/spacetx_format/schema 2019-12-13T19:22:28 copying starfish/spacetx_format/schema/experiment_5.0.0.json -> build/lib/starfish/spacetx_format/schema 2019-12-13T19:22:28 copying starfish/spacetx_format/schema/extras.json -> build/lib/starfish/spacetx_format/schema 2019-12-13T19:22:28 copying starfish/spacetx_format/schema/fov_manifest_0.0.0.json -> build/lib/starfish/spacetx_format/schema 2019-12-13T19:22:28 copying starfish/spacetx_format/schema/fov_manifest_0.1.0.json -> build/lib/starfish/spacetx_format/schema 2019-12-13T19:22:28 copying starfish/spacetx_format/schema/version.json -> build/lib/starfish/spacetx_format/schema 2019-12-13T19:22:28 creating build/lib/starfish/spacetx_format/schema/codebook_0.0.0 2019-12-13T19:22:28 copying starfish/spacetx_format/schema/codebook_0.0.0/codebook.json -> build/lib/starfish/spacetx_format/schema/codebook_0.0.0 2019-12-13T19:22:28 copying starfish/spacetx_format/schema/codebook_0.0.0/codeword.json -> build/lib/starfish/spacetx_format/schema/codebook_0.0.0 2019-12-13T19:22:28 creating build/lib/starfish/spacetx_format/schema/field_of_view_0.0.0 2019-12-13T19:22:28 copying starfish/spacetx_format/schema/field_of_view_0.0.0/field_of_view.json -> build/lib/starfish/spacetx_format/schema/field_of_view_0.0.0 2019-12-13T19:22:28 creating build/lib/starfish/spacetx_format/schema/field_of_view_0.0.0/tiles 2019-12-13T19:22:28 copying starfish/spacetx_format/schema/field_of_view_0.0.0/tiles/coordinates.json -> build/lib/starfish/spacetx_format/schema/field_of_view_0.0.0/tiles 2019-12-13T19:22:28 copying starfish/spacetx_format/schema/field_of_view_0.0.0/tiles/indices.json -> build/lib/starfish/spacetx_format/schema/field_of_view_0.0.0/tiles 2019-12-13T19:22:28 copying starfish/spacetx_format/schema/field_of_view_0.0.0/tiles/tiles.json -> build/lib/starfish/spacetx_format/schema/field_of_view_0.0.0/tiles 2019-12-13T19:22:28 creating build/lib/starfish/spacetx_format/schema/field_of_view_0.1.0 2019-12-13T19:22:28 copying starfish/spacetx_format/schema/field_of_view_0.1.0/field_of_view.json -> build/lib/starfish/spacetx_format/schema/field_of_view_0.1.0 2019-12-13T19:22:28 creating build/lib/starfish/spacetx_format/schema/field_of_view_0.1.0/tiles 2019-12-13T19:22:28 copying starfish/spacetx_format/schema/field_of_view_0.1.0/tiles/coordinates.json -> build/lib/starfish/spacetx_format/schema/field_of_view_0.1.0/tiles 2019-12-13T19:22:28 copying starfish/spacetx_format/schema/field_of_view_0.1.0/tiles/indices.json -> build/lib/starfish/spacetx_format/schema/field_of_view_0.1.0/tiles 2019-12-13T19:22:28 copying starfish/spacetx_format/schema/field_of_view_0.1.0/tiles/tiles.json -> build/lib/starfish/spacetx_format/schema/field_of_view_0.1.0/tiles 2019-12-13T19:22:28 UPDATING build/lib/starfish/core/_version.py 2019-12-13T19:22:28 set build/lib/starfish/core/_version.py to '0.1.10' 2019-12-13T19:22:28 installing to build/bdist.linux-armv7l/wheel 2019-12-13T19:22:28 running install 2019-12-13T19:22:28 running install_lib 2019-12-13T19:22:28 creating build/bdist.linux-armv7l 2019-12-13T19:22:28 creating build/bdist.linux-armv7l/wheel 2019-12-13T19:22:28 creating build/bdist.linux-armv7l/wheel/starfish 2019-12-13T19:22:28 creating build/bdist.linux-armv7l/wheel/starfish/util 2019-12-13T19:22:28 copying build/lib/starfish/util/plot.py -> build/bdist.linux-armv7l/wheel/starfish/util 2019-12-13T19:22:28 copying build/lib/starfish/util/__init__.py -> build/bdist.linux-armv7l/wheel/starfish/util 2019-12-13T19:22:28 creating build/bdist.linux-armv7l/wheel/starfish/core 2019-12-13T19:22:28 creating build/bdist.linux-armv7l/wheel/starfish/core/segmentation_mask 2019-12-13T19:22:28 copying build/lib/starfish/core/segmentation_mask/__init__.py -> build/bdist.linux-armv7l/wheel/starfish/core/segmentation_mask 2019-12-13T19:22:28 copying build/lib/starfish/core/segmentation_mask/segmentation_mask.py -> build/bdist.linux-armv7l/wheel/starfish/core/segmentation_mask 2019-12-13T19:22:28 copying build/lib/starfish/core/_display.py -> build/bdist.linux-armv7l/wheel/starfish/core 2019-12-13T19:22:28 copying build/lib/starfish/core/errors.py -> build/bdist.linux-armv7l/wheel/starfish/core 2019-12-13T19:22:28 creating build/bdist.linux-armv7l/wheel/starfish/core/morphology 2019-12-13T19:22:28 creating build/bdist.linux-armv7l/wheel/starfish/core/morphology/Filter 2019-12-13T19:22:28 copying build/lib/starfish/core/morphology/Filter/min_distance_label.py -> build/bdist.linux-armv7l/wheel/starfish/core/morphology/Filter 2019-12-13T19:22:28 copying build/lib/starfish/core/morphology/Filter/map.py -> build/bdist.linux-armv7l/wheel/starfish/core/morphology/Filter 2019-12-13T19:22:28 copying build/lib/starfish/core/morphology/Filter/structural_label.py -> build/bdist.linux-armv7l/wheel/starfish/core/morphology/Filter 2019-12-13T19:22:28 copying build/lib/starfish/core/morphology/Filter/__init__.py -> build/bdist.linux-armv7l/wheel/starfish/core/morphology/Filter 2019-12-13T19:22:28 copying build/lib/starfish/core/morphology/Filter/_base.py -> build/bdist.linux-armv7l/wheel/starfish/core/morphology/Filter 2019-12-13T19:22:28 copying build/lib/starfish/core/morphology/Filter/areafilter.py -> build/bdist.linux-armv7l/wheel/starfish/core/morphology/Filter 2019-12-13T19:22:28 creating build/bdist.linux-armv7l/wheel/starfish/core/morphology/Filter/test 2019-12-13T19:22:28 copying build/lib/starfish/core/morphology/Filter/test/__init__.py -> build/bdist.linux-armv7l/wheel/starfish/core/morphology/Filter/test 2019-12-13T19:22:28 copying build/lib/starfish/core/morphology/Filter/test/test_areafilter.py -> build/bdist.linux-armv7l/wheel/starfish/core/morphology/Filter/test 2019-12-13T19:22:28 copying build/lib/starfish/core/morphology/Filter/test/test_map.py -> build/bdist.linux-armv7l/wheel/starfish/core/morphology/Filter/test 2019-12-13T19:22:28 creating build/bdist.linux-armv7l/wheel/starfish/core/morphology/binary_mask 2019-12-13T19:22:28 copying build/lib/starfish/core/morphology/binary_mask/binary_mask.py -> build/bdist.linux-armv7l/wheel/starfish/core/morphology/binary_mask 2019-12-13T19:22:28 copying build/lib/starfish/core/morphology/binary_mask/expand.py -> build/bdist.linux-armv7l/wheel/starfish/core/morphology/binary_mask 2019-12-13T19:22:28 copying build/lib/starfish/core/morphology/binary_mask/__init__.py -> build/bdist.linux-armv7l/wheel/starfish/core/morphology/binary_mask 2019-12-13T19:22:28 copying build/lib/starfish/core/morphology/binary_mask/_io.py -> build/bdist.linux-armv7l/wheel/starfish/core/morphology/binary_mask 2019-12-13T19:22:28 creating build/bdist.linux-armv7l/wheel/starfish/core/morphology/binary_mask/test 2019-12-13T19:22:28 copying build/lib/starfish/core/morphology/binary_mask/test/test_expand.py -> build/bdist.linux-armv7l/wheel/starfish/core/morphology/binary_mask/test 2019-12-13T19:22:28 copying build/lib/starfish/core/morphology/binary_mask/test/test_binary_mask.py -> build/bdist.linux-armv7l/wheel/starfish/core/morphology/binary_mask/test 2019-12-13T19:22:28 copying build/lib/starfish/core/morphology/binary_mask/test/test_from_binary_arrays_and_ticks.py -> build/bdist.linux-armv7l/wheel/starfish/core/morphology/binary_mask/test 2019-12-13T19:22:28 copying build/lib/starfish/core/morphology/binary_mask/test/__init__.py -> build/bdist.linux-armv7l/wheel/starfish/core/morphology/binary_mask/test 2019-12-13T19:22:28 copying build/lib/starfish/core/morphology/binary_mask/test/test_from_label_array_and_ticks.py -> build/bdist.linux-armv7l/wheel/starfish/core/morphology/binary_mask/test 2019-12-13T19:22:28 copying build/lib/starfish/core/morphology/binary_mask/test/factories.py -> build/bdist.linux-armv7l/wheel/starfish/core/morphology/binary_mask/test 2019-12-13T19:22:28 creating build/bdist.linux-armv7l/wheel/starfish/core/morphology/Binarize 2019-12-13T19:22:28 copying build/lib/starfish/core/morphology/Binarize/threshold.py -> build/bdist.linux-armv7l/wheel/starfish/core/morphology/Binarize 2019-12-13T19:22:28 copying build/lib/starfish/core/morphology/Binarize/__init__.py -> build/bdist.linux-armv7l/wheel/starfish/core/morphology/Binarize 2019-12-13T19:22:28 copying build/lib/starfish/core/morphology/Binarize/_base.py -> build/bdist.linux-armv7l/wheel/starfish/core/morphology/Binarize 2019-12-13T19:22:28 creating build/bdist.linux-armv7l/wheel/starfish/core/morphology/Binarize/test 2019-12-13T19:22:28 copying build/lib/starfish/core/morphology/Binarize/test/__init__.py -> build/bdist.linux-armv7l/wheel/starfish/core/morphology/Binarize/test 2019-12-13T19:22:28 copying build/lib/starfish/core/morphology/Binarize/test/test_threshold.py -> build/bdist.linux-armv7l/wheel/starfish/core/morphology/Binarize/test 2019-12-13T19:22:28 creating build/bdist.linux-armv7l/wheel/starfish/core/morphology/label_image 2019-12-13T19:22:28 copying build/lib/starfish/core/morphology/label_image/label_image.py -> build/bdist.linux-armv7l/wheel/starfish/core/morphology/label_image 2019-12-13T19:22:28 copying build/lib/starfish/core/morphology/label_image/__init__.py -> build/bdist.linux-armv7l/wheel/starfish/core/morphology/label_image 2019-12-13T19:22:28 creating build/bdist.linux-armv7l/wheel/starfish/core/morphology/label_image/test 2019-12-13T19:22:28 copying build/lib/starfish/core/morphology/label_image/test/test_label_image.py -> build/bdist.linux-armv7l/wheel/starfish/core/morphology/label_image/test 2019-12-13T19:22:28 copying build/lib/starfish/core/morphology/label_image/test/__init__.py -> build/bdist.linux-armv7l/wheel/starfish/core/morphology/label_image/test 2019-12-13T19:22:28 copying build/lib/starfish/core/morphology/__init__.py -> build/bdist.linux-armv7l/wheel/starfish/core/morphology 2019-12-13T19:22:28 copying build/lib/starfish/core/morphology/util.py -> build/bdist.linux-armv7l/wheel/starfish/core/morphology 2019-12-13T19:22:28 creating build/bdist.linux-armv7l/wheel/starfish/core/types 2019-12-13T19:22:28 copying build/lib/starfish/core/types/_validated_table.py -> build/bdist.linux-armv7l/wheel/starfish/core/types 2019-12-13T19:22:28 copying build/lib/starfish/core/types/_spot_attributes.py -> build/bdist.linux-armv7l/wheel/starfish/core/types 2019-12-13T19:22:28 copying build/lib/starfish/core/types/_decoded_spots.py -> build/bdist.linux-armv7l/wheel/starfish/core/types 2019-12-13T19:22:28 copying build/lib/starfish/core/types/__init__.py -> build/bdist.linux-armv7l/wheel/starfish/core/types 2019-12-13T19:22:28 copying build/lib/starfish/core/types/_constants.py -> build/bdist.linux-armv7l/wheel/starfish/core/types 2019-12-13T19:22:28 copying build/lib/starfish/core/types/_functionsource.py -> build/bdist.linux-armv7l/wheel/starfish/core/types 2019-12-13T19:22:28 copying build/lib/starfish/core/types/_spot_finding_results.py -> build/bdist.linux-armv7l/wheel/starfish/core/types 2019-12-13T19:22:28 creating build/bdist.linux-armv7l/wheel/starfish/core/types/test 2019-12-13T19:22:28 copying build/lib/starfish/core/types/test/test_decoded_spots.py -> build/bdist.linux-armv7l/wheel/starfish/core/types/test 2019-12-13T19:22:28 copying build/lib/starfish/core/types/test/__init__.py -> build/bdist.linux-armv7l/wheel/starfish/core/types/test 2019-12-13T19:22:28 creating build/bdist.linux-armv7l/wheel/starfish/core/util 2019-12-13T19:22:28 copying build/lib/starfish/core/util/logging.py -> build/bdist.linux-armv7l/wheel/starfish/core/util 2019-12-13T19:22:28 copying build/lib/starfish/core/util/levels.py -> build/bdist.linux-armv7l/wheel/starfish/core/util 2019-12-13T19:22:28 copying build/lib/starfish/core/util/clock.py -> build/bdist.linux-armv7l/wheel/starfish/core/util 2019-12-13T19:22:28 copying build/lib/starfish/core/util/try_import.py -> build/bdist.linux-armv7l/wheel/starfish/core/util 2019-12-13T19:22:29 copying build/lib/starfish/core/util/__init__.py -> build/bdist.linux-armv7l/wheel/starfish/core/util 2019-12-13T19:22:29 copying build/lib/starfish/core/util/enum.py -> build/bdist.linux-armv7l/wheel/starfish/core/util 2019-12-13T19:22:29 copying build/lib/starfish/core/util/argparse.py -> build/bdist.linux-armv7l/wheel/starfish/core/util 2019-12-13T19:22:29 copying build/lib/starfish/core/util/exec.py -> build/bdist.linux-armv7l/wheel/starfish/core/util 2019-12-13T19:22:29 copying build/lib/starfish/core/util/config.py -> build/bdist.linux-armv7l/wheel/starfish/core/util 2019-12-13T19:22:29 creating build/bdist.linux-armv7l/wheel/starfish/core/util/test 2019-12-13T19:22:29 copying build/lib/starfish/core/util/test/test_levels.py -> build/bdist.linux-armv7l/wheel/starfish/core/util/test 2019-12-13T19:22:29 copying build/lib/starfish/core/util/test/__init__.py -> build/bdist.linux-armv7l/wheel/starfish/core/util/test 2019-12-13T19:22:29 copying build/lib/starfish/core/util/test/test_preserve_float_range.py -> build/bdist.linux-armv7l/wheel/starfish/core/util/test 2019-12-13T19:22:29 creating build/bdist.linux-armv7l/wheel/starfish/core/util/click 2019-12-13T19:22:29 copying build/lib/starfish/core/util/click/__init__.py -> build/bdist.linux-armv7l/wheel/starfish/core/util/click 2019-12-13T19:22:29 creating build/bdist.linux-armv7l/wheel/starfish/core/image 2019-12-13T19:22:29 creating build/bdist.linux-armv7l/wheel/starfish/core/image/Filter 2019-12-13T19:22:29 copying build/lib/starfish/core/image/Filter/clip_value_to_zero.py -> build/bdist.linux-armv7l/wheel/starfish/core/image/Filter 2019-12-13T19:22:29 copying build/lib/starfish/core/image/Filter/gaussian_low_pass.py -> build/bdist.linux-armv7l/wheel/starfish/core/image/Filter 2019-12-13T19:22:29 copying build/lib/starfish/core/image/Filter/clip.py -> build/bdist.linux-armv7l/wheel/starfish/core/image/Filter 2019-12-13T19:22:29 copying build/lib/starfish/core/image/Filter/map.py -> build/bdist.linux-armv7l/wheel/starfish/core/image/Filter 2019-12-13T19:22:29 copying build/lib/starfish/core/image/Filter/bandpass.py -> build/bdist.linux-armv7l/wheel/starfish/core/image/Filter 2019-12-13T19:22:29 copying build/lib/starfish/core/image/Filter/richardson_lucy_deconvolution.py -> build/bdist.linux-armv7l/wheel/starfish/core/image/Filter 2019-12-13T19:22:29 copying build/lib/starfish/core/image/Filter/mean_high_pass.py -> build/bdist.linux-armv7l/wheel/starfish/core/image/Filter 2019-12-13T19:22:29 copying build/lib/starfish/core/image/Filter/element_wise_mult.py -> build/bdist.linux-armv7l/wheel/starfish/core/image/Filter 2019-12-13T19:22:29 copying build/lib/starfish/core/image/Filter/__init__.py -> build/bdist.linux-armv7l/wheel/starfish/core/image/Filter 2019-12-13T19:22:29 copying build/lib/starfish/core/image/Filter/call_bases.py -> build/bdist.linux-armv7l/wheel/starfish/core/image/Filter 2019-12-13T19:22:29 copying build/lib/starfish/core/image/Filter/laplace.py -> build/bdist.linux-armv7l/wheel/starfish/core/image/Filter 2019-12-13T19:22:29 copying build/lib/starfish/core/image/Filter/_base.py -> build/bdist.linux-armv7l/wheel/starfish/core/image/Filter 2019-12-13T19:22:29 copying build/lib/starfish/core/image/Filter/white_tophat.py -> build/bdist.linux-armv7l/wheel/starfish/core/image/Filter 2019-12-13T19:22:29 copying build/lib/starfish/core/image/Filter/zero_by_channel_magnitude.py -> build/bdist.linux-armv7l/wheel/starfish/core/image/Filter 2019-12-13T19:22:29 copying build/lib/starfish/core/image/Filter/reduce.py -> build/bdist.linux-armv7l/wheel/starfish/core/image/Filter 2019-12-13T19:22:29 copying build/lib/starfish/core/image/Filter/linear_unmixing.py -> build/bdist.linux-armv7l/wheel/starfish/core/image/Filter 2019-12-13T19:22:29 copying build/lib/starfish/core/image/Filter/gaussian_high_pass.py -> build/bdist.linux-armv7l/wheel/starfish/core/image/Filter 2019-12-13T19:22:29 copying build/lib/starfish/core/image/Filter/match_histograms.py -> build/bdist.linux-armv7l/wheel/starfish/core/image/Filter 2019-12-13T19:22:29 creating build/bdist.linux-armv7l/wheel/starfish/core/image/Filter/test 2019-12-13T19:22:29 copying build/lib/starfish/core/image/Filter/test/test_histogram_matching.py -> build/bdist.linux-armv7l/wheel/starfish/core/image/Filter/test 2019-12-13T19:22:29 copying build/lib/starfish/core/image/Filter/test/test_zero_by_channel_magnitude.py -> build/bdist.linux-armv7l/wheel/starfish/core/image/Filter/test 2019-12-13T19:22:29 copying build/lib/starfish/core/image/Filter/test/test_filter.py -> build/bdist.linux-armv7l/wheel/starfish/core/image/Filter/test 2019-12-13T19:22:29 copying build/lib/starfish/core/image/Filter/test/test_api_contract.py -> build/bdist.linux-armv7l/wheel/starfish/core/image/Filter/test 2019-12-13T19:22:29 copying build/lib/starfish/core/image/Filter/test/__init__.py -> build/bdist.linux-armv7l/wheel/starfish/core/image/Filter/test 2019-12-13T19:22:29 copying build/lib/starfish/core/image/Filter/test/test_linear_unmixing.py -> build/bdist.linux-armv7l/wheel/starfish/core/image/Filter/test 2019-12-13T19:22:29 copying build/lib/starfish/core/image/Filter/test/test_map.py -> build/bdist.linux-armv7l/wheel/starfish/core/image/Filter/test 2019-12-13T19:22:29 copying build/lib/starfish/core/image/Filter/test/test_call_bases.py -> build/bdist.linux-armv7l/wheel/starfish/core/image/Filter/test 2019-12-13T19:22:29 copying build/lib/starfish/core/image/Filter/test/test_white_tophat.py -> build/bdist.linux-armv7l/wheel/starfish/core/image/Filter/test 2019-12-13T19:22:29 copying build/lib/starfish/core/image/Filter/test/test_reduce.py -> build/bdist.linux-armv7l/wheel/starfish/core/image/Filter/test 2019-12-13T19:22:29 copying build/lib/starfish/core/image/Filter/clip_percentile_to_zero.py -> build/bdist.linux-armv7l/wheel/starfish/core/image/Filter 2019-12-13T19:22:29 copying build/lib/starfish/core/image/Filter/util.py -> build/bdist.linux-armv7l/wheel/starfish/core/image/Filter 2019-12-13T19:22:29 creating build/bdist.linux-armv7l/wheel/starfish/core/image/_registration 2019-12-13T19:22:29 creating build/bdist.linux-armv7l/wheel/starfish/core/image/_registration/LearnTransform 2019-12-13T19:22:29 copying build/lib/starfish/core/image/_registration/LearnTransform/translation.py -> build/bdist.linux-armv7l/wheel/starfish/core/image/_registration/LearnTransform 2019-12-13T19:22:29 copying build/lib/starfish/core/image/_registration/LearnTransform/__init__.py -> build/bdist.linux-armv7l/wheel/starfish/core/image/_registration/LearnTransform 2019-12-13T19:22:29 copying build/lib/starfish/core/image/_registration/LearnTransform/_base.py -> build/bdist.linux-armv7l/wheel/starfish/core/image/_registration/LearnTransform 2019-12-13T19:22:29 creating build/bdist.linux-armv7l/wheel/starfish/core/image/_registration/LearnTransform/test 2019-12-13T19:22:29 copying build/lib/starfish/core/image/_registration/LearnTransform/test/test_translation.py -> build/bdist.linux-armv7l/wheel/starfish/core/image/_registration/LearnTransform/test 2019-12-13T19:22:29 copying build/lib/starfish/core/image/_registration/LearnTransform/test/__init__.py -> build/bdist.linux-armv7l/wheel/starfish/core/image/_registration/LearnTransform/test 2019-12-13T19:22:29 copying build/lib/starfish/core/image/_registration/transforms_list.py -> build/bdist.linux-armv7l/wheel/starfish/core/image/_registration 2019-12-13T19:22:29 copying build/lib/starfish/core/image/_registration/__init__.py -> build/bdist.linux-armv7l/wheel/starfish/core/image/_registration 2019-12-13T19:22:29 creating build/bdist.linux-armv7l/wheel/starfish/core/image/_registration/test 2019-12-13T19:22:29 copying build/lib/starfish/core/image/_registration/test/test_transforms_list.py -> build/bdist.linux-armv7l/wheel/starfish/core/image/_registration/test 2019-12-13T19:22:29 copying build/lib/starfish/core/image/_registration/test/__init__.py -> build/bdist.linux-armv7l/wheel/starfish/core/image/_registration/test 2019-12-13T19:22:29 creating build/bdist.linux-armv7l/wheel/starfish/core/image/_registration/ApplyTransform 2019-12-13T19:22:29 copying build/lib/starfish/core/image/_registration/ApplyTransform/__init__.py -> build/bdist.linux-armv7l/wheel/starfish/core/image/_registration/ApplyTransform 2019-12-13T19:22:29 copying build/lib/starfish/core/image/_registration/ApplyTransform/_base.py -> build/bdist.linux-armv7l/wheel/starfish/core/image/_registration/ApplyTransform 2019-12-13T19:22:29 creating build/bdist.linux-armv7l/wheel/starfish/core/image/_registration/ApplyTransform/test 2019-12-13T19:22:29 copying build/lib/starfish/core/image/_registration/ApplyTransform/test/test_warp.py -> build/bdist.linux-armv7l/wheel/starfish/core/image/_registration/ApplyTransform/test 2019-12-13T19:22:29 copying build/lib/starfish/core/image/_registration/ApplyTransform/test/__init__.py -> build/bdist.linux-armv7l/wheel/starfish/core/image/_registration/ApplyTransform/test 2019-12-13T19:22:29 copying build/lib/starfish/core/image/_registration/ApplyTransform/warp.py -> build/bdist.linux-armv7l/wheel/starfish/core/image/_registration/ApplyTransform 2019-12-13T19:22:29 copying build/lib/starfish/core/image/_registration/_format.py -> build/bdist.linux-armv7l/wheel/starfish/core/image/_registration 2019-12-13T19:22:29 creating build/bdist.linux-armv7l/wheel/starfish/core/image/Segment 2019-12-13T19:22:29 copying build/lib/starfish/core/image/Segment/watershed.py -> build/bdist.linux-armv7l/wheel/starfish/core/image/Segment 2019-12-13T19:22:29 copying build/lib/starfish/core/image/Segment/__init__.py -> build/bdist.linux-armv7l/wheel/starfish/core/image/Segment 2019-12-13T19:22:29 copying build/lib/starfish/core/image/Segment/_base.py -> build/bdist.linux-armv7l/wheel/starfish/core/image/Segment 2019-12-13T19:22:29 copying build/lib/starfish/core/image/__init__.py -> build/bdist.linux-armv7l/wheel/starfish/core/image 2019-12-13T19:22:29 copying build/lib/starfish/core/starfish.py -> build/bdist.linux-armv7l/wheel/starfish/core 2019-12-13T19:22:29 creating build/bdist.linux-armv7l/wheel/starfish/core/intensity_table 2019-12-13T19:22:29 copying build/lib/starfish/core/intensity_table/intensity_table.py -> build/bdist.linux-armv7l/wheel/starfish/core/intensity_table 2019-12-13T19:22:29 copying build/lib/starfish/core/intensity_table/concatenate.py -> build/bdist.linux-armv7l/wheel/starfish/core/intensity_table 2019-12-13T19:22:29 copying build/lib/starfish/core/intensity_table/decoded_intensity_table.py -> build/bdist.linux-armv7l/wheel/starfish/core/intensity_table 2019-12-13T19:22:29 copying build/lib/starfish/core/intensity_table/__init__.py -> build/bdist.linux-armv7l/wheel/starfish/core/intensity_table 2019-12-13T19:22:29 copying build/lib/starfish/core/intensity_table/overlap.py -> build/bdist.linux-armv7l/wheel/starfish/core/intensity_table 2019-12-13T19:22:29 copying build/lib/starfish/core/intensity_table/intensity_table_coordinates.py -> build/bdist.linux-armv7l/wheel/starfish/core/intensity_table 2019-12-13T19:22:29 creating build/bdist.linux-armv7l/wheel/starfish/core/intensity_table/test 2019-12-13T19:22:29 copying build/lib/starfish/core/intensity_table/test/test_from_imagestack.py -> build/bdist.linux-armv7l/wheel/starfish/core/intensity_table/test 2019-12-13T19:22:29 copying build/lib/starfish/core/intensity_table/test/test_overlap.py -> build/bdist.linux-armv7l/wheel/starfish/core/intensity_table/test 2019-12-13T19:22:29 copying build/lib/starfish/core/intensity_table/test/test_intensity_table_coords.py -> build/bdist.linux-armv7l/wheel/starfish/core/intensity_table/test 2019-12-13T19:22:29 copying build/lib/starfish/core/intensity_table/test/test_intensity_table_serialization.py -> build/bdist.linux-armv7l/wheel/starfish/core/intensity_table/test 2019-12-13T19:22:29 copying build/lib/starfish/core/intensity_table/test/test_empty_intensity_table.py -> build/bdist.linux-armv7l/wheel/starfish/core/intensity_table/test 2019-12-13T19:22:29 copying build/lib/starfish/core/intensity_table/test/test_from_spot_data.py -> build/bdist.linux-armv7l/wheel/starfish/core/intensity_table/test 2019-12-13T19:22:29 copying build/lib/starfish/core/intensity_table/test/test_concatenate.py -> build/bdist.linux-armv7l/wheel/starfish/core/intensity_table/test 2019-12-13T19:22:29 copying build/lib/starfish/core/intensity_table/test/__init__.py -> build/bdist.linux-armv7l/wheel/starfish/core/intensity_table/test 2019-12-13T19:22:29 copying build/lib/starfish/core/intensity_table/test/test_to_mermaid.py -> build/bdist.linux-armv7l/wheel/starfish/core/intensity_table/test 2019-12-13T19:22:29 copying build/lib/starfish/core/intensity_table/test/test_stack_intensity_table_reshaping.py -> build/bdist.linux-armv7l/wheel/starfish/core/intensity_table/test 2019-12-13T19:22:29 copying build/lib/starfish/core/intensity_table/test/test_synthetic_intensities.py -> build/bdist.linux-armv7l/wheel/starfish/core/intensity_table/test 2019-12-13T19:22:29 copying build/lib/starfish/core/intensity_table/test/factories.py -> build/bdist.linux-armv7l/wheel/starfish/core/intensity_table/test 2019-12-13T19:22:29 copying build/lib/starfish/core/compat.py -> build/bdist.linux-armv7l/wheel/starfish/core 2019-12-13T19:22:29 creating build/bdist.linux-armv7l/wheel/starfish/core/experiment 2019-12-13T19:22:29 copying build/lib/starfish/core/experiment/version.py -> build/bdist.linux-armv7l/wheel/starfish/core/experiment 2019-12-13T19:22:29 copying build/lib/starfish/core/experiment/experiment.py -> build/bdist.linux-armv7l/wheel/starfish/core/experiment 2019-12-13T19:22:29 copying build/lib/starfish/core/experiment/__init__.py -> build/bdist.linux-armv7l/wheel/starfish/core/experiment 2019-12-13T19:22:29 creating build/bdist.linux-armv7l/wheel/starfish/core/experiment/builder 2019-12-13T19:22:29 copying build/lib/starfish/core/experiment/builder/structured_formatter.py -> build/bdist.linux-armv7l/wheel/starfish/core/experiment/builder 2019-12-13T19:22:29 copying build/lib/starfish/core/experiment/builder/defaultproviders.py -> build/bdist.linux-armv7l/wheel/starfish/core/experiment/builder 2019-12-13T19:22:29 copying build/lib/starfish/core/experiment/builder/providers.py -> build/bdist.linux-armv7l/wheel/starfish/core/experiment/builder 2019-12-13T19:22:29 copying build/lib/starfish/core/experiment/builder/__init__.py -> build/bdist.linux-armv7l/wheel/starfish/core/experiment/builder 2019-12-13T19:22:29 copying build/lib/starfish/core/experiment/builder/inplace.py -> build/bdist.linux-armv7l/wheel/starfish/core/experiment/builder 2019-12-13T19:22:29 creating build/bdist.linux-armv7l/wheel/starfish/core/experiment/builder/test 2019-12-13T19:22:29 copying build/lib/starfish/core/experiment/builder/test/test_small_axis.py -> build/bdist.linux-armv7l/wheel/starfish/core/experiment/builder/test 2019-12-13T19:22:29 creating build/bdist.linux-armv7l/wheel/starfish/core/experiment/builder/test/factories 2019-12-13T19:22:29 copying build/lib/starfish/core/experiment/builder/test/factories/unique_tiles.py -> build/bdist.linux-armv7l/wheel/starfish/core/experiment/builder/test/factories 2019-12-13T19:22:29 copying build/lib/starfish/core/experiment/builder/test/factories/all_purpose.py -> build/bdist.linux-armv7l/wheel/starfish/core/experiment/builder/test/factories 2019-12-13T19:22:29 copying build/lib/starfish/core/experiment/builder/test/factories/__init__.py -> build/bdist.linux-armv7l/wheel/starfish/core/experiment/builder/test/factories 2019-12-13T19:22:29 copying build/lib/starfish/core/experiment/builder/test/__init__.py -> build/bdist.linux-armv7l/wheel/starfish/core/experiment/builder/test 2019-12-13T19:22:29 creating build/bdist.linux-armv7l/wheel/starfish/core/experiment/builder/test/structured_formatter 2019-12-13T19:22:29 copying build/lib/starfish/core/experiment/builder/test/structured_formatter/test_tilepath.py -> build/bdist.linux-armv7l/wheel/starfish/core/experiment/builder/test/structured_formatter 2019-12-13T19:22:29 copying build/lib/starfish/core/experiment/builder/test/structured_formatter/test_single_fov.py -> build/bdist.linux-armv7l/wheel/starfish/core/experiment/builder/test/structured_formatter 2019-12-13T19:22:29 copying build/lib/starfish/core/experiment/builder/test/structured_formatter/test_multiple_fov.py -> build/bdist.linux-armv7l/wheel/starfish/core/experiment/builder/test/structured_formatter 2019-12-13T19:22:29 copying build/lib/starfish/core/experiment/builder/test/structured_formatter/__init__.py -> build/bdist.linux-armv7l/wheel/starfish/core/experiment/builder/test/structured_formatter 2019-12-13T19:22:29 copying build/lib/starfish/core/experiment/builder/test/structured_formatter/util.py -> build/bdist.linux-armv7l/wheel/starfish/core/experiment/builder/test/structured_formatter 2019-12-13T19:22:29 copying build/lib/starfish/core/experiment/builder/test/test_orderediterator.py -> build/bdist.linux-armv7l/wheel/starfish/core/experiment/builder/test 2019-12-13T19:22:29 copying build/lib/starfish/core/experiment/builder/test/test_inplace.py -> build/bdist.linux-armv7l/wheel/starfish/core/experiment/builder/test 2019-12-13T19:22:29 copying build/lib/starfish/core/experiment/builder/orderediterator.py -> build/bdist.linux-armv7l/wheel/starfish/core/experiment/builder 2019-12-13T19:22:29 creating build/bdist.linux-armv7l/wheel/starfish/core/experiment/test 2019-12-13T19:22:29 copying build/lib/starfish/core/experiment/test/__init__.py -> build/bdist.linux-armv7l/wheel/starfish/core/experiment/test 2019-12-13T19:22:29 copying build/lib/starfish/core/experiment/test/test_experiment.py -> build/bdist.linux-armv7l/wheel/starfish/core/experiment/test 2019-12-13T19:22:29 copying build/lib/starfish/core/experiment/test/test_version.py -> build/bdist.linux-armv7l/wheel/starfish/core/experiment/test 2019-12-13T19:22:29 copying build/lib/starfish/core/_version.py -> build/bdist.linux-armv7l/wheel/starfish/core 2019-12-13T19:22:29 creating build/bdist.linux-armv7l/wheel/starfish/core/expression_matrix 2019-12-13T19:22:29 copying build/lib/starfish/core/expression_matrix/concatenate.py -> build/bdist.linux-armv7l/wheel/starfish/core/expression_matrix 2019-12-13T19:22:29 copying build/lib/starfish/core/expression_matrix/__init__.py -> build/bdist.linux-armv7l/wheel/starfish/core/expression_matrix 2019-12-13T19:22:29 copying build/lib/starfish/core/expression_matrix/expression_matrix.py -> build/bdist.linux-armv7l/wheel/starfish/core/expression_matrix 2019-12-13T19:22:29 creating build/bdist.linux-armv7l/wheel/starfish/core/expression_matrix/test 2019-12-13T19:22:29 copying build/lib/starfish/core/expression_matrix/test/test_concatenate.py -> build/bdist.linux-armv7l/wheel/starfish/core/expression_matrix/test 2019-12-13T19:22:29 copying build/lib/starfish/core/expression_matrix/test/__init__.py -> build/bdist.linux-armv7l/wheel/starfish/core/expression_matrix/test 2019-12-13T19:22:29 copying build/lib/starfish/core/expression_matrix/test/test_serialization.py -> build/bdist.linux-armv7l/wheel/starfish/core/expression_matrix/test 2019-12-13T19:22:29 copying build/lib/starfish/core/__init__.py -> build/bdist.linux-armv7l/wheel/starfish/core 2019-12-13T19:22:29 creating build/bdist.linux-armv7l/wheel/starfish/core/imagestack 2019-12-13T19:22:29 creating build/bdist.linux-armv7l/wheel/starfish/core/imagestack/parser 2019-12-13T19:22:29 copying build/lib/starfish/core/imagestack/parser/_tiledata.py -> build/bdist.linux-armv7l/wheel/starfish/core/imagestack/parser 2019-12-13T19:22:29 creating build/bdist.linux-armv7l/wheel/starfish/core/imagestack/parser/tileset 2019-12-13T19:22:29 copying build/lib/starfish/core/imagestack/parser/tileset/_parser.py -> build/bdist.linux-armv7l/wheel/starfish/core/imagestack/parser/tileset 2019-12-13T19:22:29 copying build/lib/starfish/core/imagestack/parser/tileset/__init__.py -> build/bdist.linux-armv7l/wheel/starfish/core/imagestack/parser/tileset 2019-12-13T19:22:29 copying build/lib/starfish/core/imagestack/parser/__init__.py -> build/bdist.linux-armv7l/wheel/starfish/core/imagestack/parser 2019-12-13T19:22:29 copying build/lib/starfish/core/imagestack/parser/_key.py -> build/bdist.linux-armv7l/wheel/starfish/core/imagestack/parser 2019-12-13T19:22:29 creating build/bdist.linux-armv7l/wheel/starfish/core/imagestack/parser/numpy 2019-12-13T19:22:29 copying build/lib/starfish/core/imagestack/parser/numpy/__init__.py -> build/bdist.linux-armv7l/wheel/starfish/core/imagestack/parser/numpy 2019-12-13T19:22:29 copying build/lib/starfish/core/imagestack/parser/crop.py -> build/bdist.linux-armv7l/wheel/starfish/core/imagestack/parser 2019-12-13T19:22:29 copying build/lib/starfish/core/imagestack/__init__.py -> build/bdist.linux-armv7l/wheel/starfish/core/imagestack 2019-12-13T19:22:29 copying build/lib/starfish/core/imagestack/physical_coordinates.py -> build/bdist.linux-armv7l/wheel/starfish/core/imagestack 2019-12-13T19:22:29 copying build/lib/starfish/core/imagestack/indexing_utils.py -> build/bdist.linux-armv7l/wheel/starfish/core/imagestack 2019-12-13T19:22:29 copying build/lib/starfish/core/imagestack/dataorder.py -> build/bdist.linux-armv7l/wheel/starfish/core/imagestack 2019-12-13T19:22:29 creating build/bdist.linux-armv7l/wheel/starfish/core/imagestack/test 2019-12-13T19:22:29 copying build/lib/starfish/core/imagestack/test/test_coordinates.py -> build/bdist.linux-armv7l/wheel/starfish/core/imagestack/test 2019-12-13T19:22:29 copying build/lib/starfish/core/imagestack/test/test_labeled_indices.py -> build/bdist.linux-armv7l/wheel/starfish/core/imagestack/test 2019-12-13T19:22:29 copying build/lib/starfish/core/imagestack/test/test_cropped_load.py -> build/bdist.linux-armv7l/wheel/starfish/core/imagestack/test 2019-12-13T19:22:29 copying build/lib/starfish/core/imagestack/test/test_from_numpy_array.py -> build/bdist.linux-armv7l/wheel/starfish/core/imagestack/test 2019-12-13T19:22:29 creating build/bdist.linux-armv7l/wheel/starfish/core/imagestack/test/factories 2019-12-13T19:22:29 copying build/lib/starfish/core/imagestack/test/factories/unique_tiles.py -> build/bdist.linux-armv7l/wheel/starfish/core/imagestack/test/factories 2019-12-13T19:22:29 copying build/lib/starfish/core/imagestack/test/factories/all_purpose.py -> build/bdist.linux-armv7l/wheel/starfish/core/imagestack/test/factories 2019-12-13T19:22:29 copying build/lib/starfish/core/imagestack/test/factories/__init__.py -> build/bdist.linux-armv7l/wheel/starfish/core/imagestack/test/factories 2019-12-13T19:22:29 copying build/lib/starfish/core/imagestack/test/factories/with_coords.py -> build/bdist.linux-armv7l/wheel/starfish/core/imagestack/test/factories 2019-12-13T19:22:29 copying build/lib/starfish/core/imagestack/test/factories/synthetic_stack.py -> build/bdist.linux-armv7l/wheel/starfish/core/imagestack/test/factories 2019-12-13T19:22:29 copying build/lib/starfish/core/imagestack/test/factories/from_codebook.py -> build/bdist.linux-armv7l/wheel/starfish/core/imagestack/test/factories 2019-12-13T19:22:29 copying build/lib/starfish/core/imagestack/test/test_index.py -> build/bdist.linux-armv7l/wheel/starfish/core/imagestack/test 2019-12-13T19:22:29 copying build/lib/starfish/core/imagestack/test/test_apply.py -> build/bdist.linux-armv7l/wheel/starfish/core/imagestack/test 2019-12-13T19:22:29 copying build/lib/starfish/core/imagestack/test/__init__.py -> build/bdist.linux-armv7l/wheel/starfish/core/imagestack/test 2019-12-13T19:22:29 copying build/lib/starfish/core/imagestack/test/test_physical_coordinate_calculator.py -> build/bdist.linux-armv7l/wheel/starfish/core/imagestack/test 2019-12-13T19:22:29 copying build/lib/starfish/core/imagestack/test/test_export.py -> build/bdist.linux-armv7l/wheel/starfish/core/imagestack/test 2019-12-13T19:22:29 copying build/lib/starfish/core/imagestack/test/imagestack_test_utils.py -> build/bdist.linux-armv7l/wheel/starfish/core/imagestack/test 2019-12-13T19:22:29 copying build/lib/starfish/core/imagestack/test/test_slicedimage_dtype.py -> build/bdist.linux-armv7l/wheel/starfish/core/imagestack/test 2019-12-13T19:22:29 copying build/lib/starfish/core/imagestack/test/test_max_proj.py -> build/bdist.linux-armv7l/wheel/starfish/core/imagestack/test 2019-12-13T19:22:29 copying build/lib/starfish/core/imagestack/test/test_metadata.py -> build/bdist.linux-armv7l/wheel/starfish/core/imagestack/test 2019-12-13T19:22:29 copying build/lib/starfish/core/imagestack/test/test_slice_ops.py -> build/bdist.linux-armv7l/wheel/starfish/core/imagestack/test 2019-12-13T19:22:29 copying build/lib/starfish/core/imagestack/imagestack.py -> build/bdist.linux-armv7l/wheel/starfish/core/imagestack 2019-12-13T19:22:29 creating build/bdist.linux-armv7l/wheel/starfish/core/spots 2019-12-13T19:22:29 creating build/bdist.linux-armv7l/wheel/starfish/core/spots/AssignTargets 2019-12-13T19:22:29 copying build/lib/starfish/core/spots/AssignTargets/label.py -> build/bdist.linux-armv7l/wheel/starfish/core/spots/AssignTargets 2019-12-13T19:22:29 copying build/lib/starfish/core/spots/AssignTargets/__init__.py -> build/bdist.linux-armv7l/wheel/starfish/core/spots/AssignTargets 2019-12-13T19:22:29 copying build/lib/starfish/core/spots/AssignTargets/_base.py -> build/bdist.linux-armv7l/wheel/starfish/core/spots/AssignTargets 2019-12-13T19:22:29 creating build/bdist.linux-armv7l/wheel/starfish/core/spots/DetectPixels 2019-12-13T19:22:29 copying build/lib/starfish/core/spots/DetectPixels/combine_adjacent_features.py -> build/bdist.linux-armv7l/wheel/starfish/core/spots/DetectPixels 2019-12-13T19:22:29 copying build/lib/starfish/core/spots/DetectPixels/__init__.py -> build/bdist.linux-armv7l/wheel/starfish/core/spots/DetectPixels 2019-12-13T19:22:29 copying build/lib/starfish/core/spots/DetectPixels/_base.py -> build/bdist.linux-armv7l/wheel/starfish/core/spots/DetectPixels 2019-12-13T19:22:29 copying build/lib/starfish/core/spots/DetectPixels/pixel_spot_decoder.py -> build/bdist.linux-armv7l/wheel/starfish/core/spots/DetectPixels 2019-12-13T19:22:29 creating build/bdist.linux-armv7l/wheel/starfish/core/spots/DetectPixels/test 2019-12-13T19:22:29 copying build/lib/starfish/core/spots/DetectPixels/test/test_targets_map.py -> build/bdist.linux-armv7l/wheel/starfish/core/spots/DetectPixels/test 2019-12-13T19:22:29 copying build/lib/starfish/core/spots/DetectPixels/test/test_intensities_to_decoded_image.py -> build/bdist.linux-armv7l/wheel/starfish/core/spots/DetectPixels/test 2019-12-13T19:22:29 copying build/lib/starfish/core/spots/DetectPixels/test/test_calculate_mean_pixel_traces.py -> build/bdist.linux-armv7l/wheel/starfish/core/spots/DetectPixels/test 2019-12-13T19:22:29 copying build/lib/starfish/core/spots/DetectPixels/test/__init__.py -> build/bdist.linux-armv7l/wheel/starfish/core/spots/DetectPixels/test 2019-12-13T19:22:29 copying build/lib/starfish/core/spots/DetectPixels/test/test_create_spot_attributes.py -> build/bdist.linux-armv7l/wheel/starfish/core/spots/DetectPixels/test 2019-12-13T19:22:29 creating build/bdist.linux-armv7l/wheel/starfish/core/spots/DecodeSpots 2019-12-13T19:22:29 copying build/lib/starfish/core/spots/DecodeSpots/metric_decoder.py -> build/bdist.linux-armv7l/wheel/starfish/core/spots/DecodeSpots 2019-12-13T19:22:29 copying build/lib/starfish/core/spots/DecodeSpots/per_round_max_channel_decoder.py -> build/bdist.linux-armv7l/wheel/starfish/core/spots/DecodeSpots 2019-12-13T19:22:29 copying build/lib/starfish/core/spots/DecodeSpots/trace_builders.py -> build/bdist.linux-armv7l/wheel/starfish/core/spots/DecodeSpots 2019-12-13T19:22:29 copying build/lib/starfish/core/spots/DecodeSpots/simple_lookup_decoder.py -> build/bdist.linux-armv7l/wheel/starfish/core/spots/DecodeSpots 2019-12-13T19:22:29 copying build/lib/starfish/core/spots/DecodeSpots/__init__.py -> build/bdist.linux-armv7l/wheel/starfish/core/spots/DecodeSpots 2019-12-13T19:22:29 copying build/lib/starfish/core/spots/DecodeSpots/_base.py -> build/bdist.linux-armv7l/wheel/starfish/core/spots/DecodeSpots 2019-12-13T19:22:29 creating build/bdist.linux-armv7l/wheel/starfish/core/spots/DecodeSpots/test 2019-12-13T19:22:29 copying build/lib/starfish/core/spots/DecodeSpots/test/test_trace_builders.py -> build/bdist.linux-armv7l/wheel/starfish/core/spots/DecodeSpots/test 2019-12-13T19:22:29 copying build/lib/starfish/core/spots/DecodeSpots/test/test_decoding_without_spots.py -> build/bdist.linux-armv7l/wheel/starfish/core/spots/DecodeSpots/test 2019-12-13T19:22:29 copying build/lib/starfish/core/spots/DecodeSpots/test/test_nearest_neighbor_trace_builder.py -> build/bdist.linux-armv7l/wheel/starfish/core/spots/DecodeSpots/test 2019-12-13T19:22:29 copying build/lib/starfish/core/spots/DecodeSpots/test/__init__.py -> build/bdist.linux-armv7l/wheel/starfish/core/spots/DecodeSpots/test 2019-12-13T19:22:29 copying build/lib/starfish/core/spots/DecodeSpots/test/test_composite_codebook.py -> build/bdist.linux-armv7l/wheel/starfish/core/spots/DecodeSpots/test 2019-12-13T19:22:29 copying build/lib/starfish/core/spots/DecodeSpots/util.py -> build/bdist.linux-armv7l/wheel/starfish/core/spots/DecodeSpots 2019-12-13T19:22:29 copying build/lib/starfish/core/spots/__init__.py -> build/bdist.linux-armv7l/wheel/starfish/core/spots 2019-12-13T19:22:29 creating build/bdist.linux-armv7l/wheel/starfish/core/spots/FindSpots 2019-12-13T19:22:29 copying build/lib/starfish/core/spots/FindSpots/trackpy_local_max_peak_finder.py -> build/bdist.linux-armv7l/wheel/starfish/core/spots/FindSpots 2019-12-13T19:22:29 copying build/lib/starfish/core/spots/FindSpots/local_max_peak_finder.py -> build/bdist.linux-armv7l/wheel/starfish/core/spots/FindSpots 2019-12-13T19:22:29 copying build/lib/starfish/core/spots/FindSpots/__init__.py -> build/bdist.linux-armv7l/wheel/starfish/core/spots/FindSpots 2019-12-13T19:22:29 copying build/lib/starfish/core/spots/FindSpots/_base.py -> build/bdist.linux-armv7l/wheel/starfish/core/spots/FindSpots 2019-12-13T19:22:29 copying build/lib/starfish/core/spots/FindSpots/blob.py -> build/bdist.linux-armv7l/wheel/starfish/core/spots/FindSpots 2019-12-13T19:22:29 copying build/lib/starfish/core/spots/FindSpots/spot_finding_utils.py -> build/bdist.linux-armv7l/wheel/starfish/core/spots/FindSpots 2019-12-13T19:22:29 creating build/bdist.linux-armv7l/wheel/starfish/core/spots/FindSpots/test 2019-12-13T19:22:29 copying build/lib/starfish/core/spots/FindSpots/test/test_spot_detection.py -> build/bdist.linux-armv7l/wheel/starfish/core/spots/FindSpots/test 2019-12-13T19:22:29 copying build/lib/starfish/core/spots/FindSpots/test/__init__.py -> build/bdist.linux-armv7l/wheel/starfish/core/spots/FindSpots/test 2019-12-13T19:22:29 copying build/lib/starfish/core/spots/FindSpots/test/test_synthetic_data.py -> build/bdist.linux-armv7l/wheel/starfish/core/spots/FindSpots/test 2019-12-13T19:22:29 creating build/bdist.linux-armv7l/wheel/starfish/core/config 2019-12-13T19:22:29 copying build/lib/starfish/core/config/__init__.py -> build/bdist.linux-armv7l/wheel/starfish/core/config 2019-12-13T19:22:29 creating build/bdist.linux-armv7l/wheel/starfish/core/config/test 2019-12-13T19:22:29 copying build/lib/starfish/core/config/test/__init__.py -> build/bdist.linux-armv7l/wheel/starfish/core/config/test 2019-12-13T19:22:29 copying build/lib/starfish/core/config/test/test_config.py -> build/bdist.linux-armv7l/wheel/starfish/core/config/test 2019-12-13T19:22:29 creating build/bdist.linux-armv7l/wheel/starfish/core/spacetx_format 2019-12-13T19:22:29 copying build/lib/starfish/core/spacetx_format/test_codebook.py -> build/bdist.linux-armv7l/wheel/starfish/core/spacetx_format 2019-12-13T19:22:29 copying build/lib/starfish/core/spacetx_format/test_coordinates.py -> build/bdist.linux-armv7l/wheel/starfish/core/spacetx_format 2019-12-13T19:22:29 copying build/lib/starfish/core/spacetx_format/test_fuzz.py -> build/bdist.linux-armv7l/wheel/starfish/core/spacetx_format 2019-12-13T19:22:29 copying build/lib/starfish/core/spacetx_format/test_fov_manifest.py -> build/bdist.linux-armv7l/wheel/starfish/core/spacetx_format 2019-12-13T19:22:29 copying build/lib/starfish/core/spacetx_format/validate_sptx.py -> build/bdist.linux-armv7l/wheel/starfish/core/spacetx_format 2019-12-13T19:22:29 copying build/lib/starfish/core/spacetx_format/__init__.py -> build/bdist.linux-armv7l/wheel/starfish/core/spacetx_format 2019-12-13T19:22:29 copying build/lib/starfish/core/spacetx_format/test_experiment.py -> build/bdist.linux-armv7l/wheel/starfish/core/spacetx_format 2019-12-13T19:22:29 copying build/lib/starfish/core/spacetx_format/test_field_of_view.py -> build/bdist.linux-armv7l/wheel/starfish/core/spacetx_format 2019-12-13T19:22:29 copying build/lib/starfish/core/spacetx_format/cli.py -> build/bdist.linux-armv7l/wheel/starfish/core/spacetx_format 2019-12-13T19:22:29 copying build/lib/starfish/core/spacetx_format/util.py -> build/bdist.linux-armv7l/wheel/starfish/core/spacetx_format 2019-12-13T19:22:29 creating build/bdist.linux-armv7l/wheel/starfish/core/pipeline 2019-12-13T19:22:29 copying build/lib/starfish/core/pipeline/algorithmbase.py -> build/bdist.linux-armv7l/wheel/starfish/core/pipeline 2019-12-13T19:22:29 copying build/lib/starfish/core/pipeline/__init__.py -> build/bdist.linux-armv7l/wheel/starfish/core/pipeline 2019-12-13T19:22:29 creating build/bdist.linux-armv7l/wheel/starfish/core/codebook 2019-12-13T19:22:29 copying build/lib/starfish/core/codebook/__init__.py -> build/bdist.linux-armv7l/wheel/starfish/core/codebook 2019-12-13T19:22:29 copying build/lib/starfish/core/codebook/codebook.py -> build/bdist.linux-armv7l/wheel/starfish/core/codebook 2019-12-13T19:22:29 creating build/bdist.linux-armv7l/wheel/starfish/core/codebook/test 2019-12-13T19:22:29 copying build/lib/starfish/core/codebook/test/test_per_round_max_decode.py -> build/bdist.linux-armv7l/wheel/starfish/core/codebook/test 2019-12-13T19:22:29 copying build/lib/starfish/core/codebook/test/test_to_json.py -> build/bdist.linux-armv7l/wheel/starfish/core/codebook/test 2019-12-13T19:22:29 copying build/lib/starfish/core/codebook/test/test_normalize_code_traces.py -> build/bdist.linux-armv7l/wheel/starfish/core/codebook/test 2019-12-13T19:22:29 copying build/lib/starfish/core/codebook/test/test_approximate_nearest_code.py -> build/bdist.linux-armv7l/wheel/starfish/core/codebook/test 2019-12-13T19:22:30 copying build/lib/starfish/core/codebook/test/__init__.py -> build/bdist.linux-armv7l/wheel/starfish/core/codebook/test 2019-12-13T19:22:30 copying build/lib/starfish/core/codebook/test/test_from_code_array.py -> build/bdist.linux-armv7l/wheel/starfish/core/codebook/test 2019-12-13T19:22:30 copying build/lib/starfish/core/codebook/test/test_code_length.py -> build/bdist.linux-armv7l/wheel/starfish/core/codebook/test 2019-12-13T19:22:30 copying build/lib/starfish/core/codebook/test/test_synthetic_one_hot_codebook.py -> build/bdist.linux-armv7l/wheel/starfish/core/codebook/test 2019-12-13T19:22:30 copying build/lib/starfish/core/codebook/test/test_metric_decode.py -> build/bdist.linux-armv7l/wheel/starfish/core/codebook/test 2019-12-13T19:22:30 copying build/lib/starfish/core/codebook/test/factories.py -> build/bdist.linux-armv7l/wheel/starfish/core/codebook/test 2019-12-13T19:22:30 copying build/lib/starfish/core/codebook/_format.py -> build/bdist.linux-armv7l/wheel/starfish/core/codebook 2019-12-13T19:22:30 creating build/bdist.linux-armv7l/wheel/starfish/core/test 2019-12-13T19:22:30 copying build/lib/starfish/core/test/test_multiprocessing_workflow.py -> build/bdist.linux-armv7l/wheel/starfish/core/test 2019-12-13T19:22:30 copying build/lib/starfish/core/test/test_display.py -> build/bdist.linux-armv7l/wheel/starfish/core/test 2019-12-13T19:22:30 copying build/lib/starfish/core/test/__init__.py -> build/bdist.linux-armv7l/wheel/starfish/core/test 2019-12-13T19:22:30 copying build/lib/starfish/core/test/test_synthetic_spot_creation.py -> build/bdist.linux-armv7l/wheel/starfish/core/test 2019-12-13T19:22:30 copying build/lib/starfish/core/test/factories.py -> build/bdist.linux-armv7l/wheel/starfish/core/test 2019-12-13T19:22:30 creating build/bdist.linux-armv7l/wheel/starfish/experiment 2019-12-13T19:22:30 copying build/lib/starfish/experiment/__init__.py -> build/bdist.linux-armv7l/wheel/starfish/experiment 2019-12-13T19:22:30 copying build/lib/starfish/experiment/builder.py -> build/bdist.linux-armv7l/wheel/starfish/experiment 2019-12-13T19:22:30 copying build/lib/starfish/__init__.py -> build/bdist.linux-armv7l/wheel/starfish 2019-12-13T19:22:30 copying build/lib/starfish/__main__.py -> build/bdist.linux-armv7l/wheel/starfish 2019-12-13T19:22:30 copying build/lib/starfish/REQUIREMENTS-STRICT.txt -> build/bdist.linux-armv7l/wheel/starfish 2019-12-13T19:22:30 copying build/lib/starfish/image.py -> build/bdist.linux-armv7l/wheel/starfish 2019-12-13T19:22:30 copying build/lib/starfish/spots.py -> build/bdist.linux-armv7l/wheel/starfish 2019-12-13T19:22:30 creating build/bdist.linux-armv7l/wheel/starfish/spacetx_format 2019-12-13T19:22:30 creating build/bdist.linux-armv7l/wheel/starfish/spacetx_format/examples 2019-12-13T19:22:30 creating build/bdist.linux-armv7l/wheel/starfish/spacetx_format/examples/experiment 2019-12-13T19:22:30 copying build/lib/starfish/spacetx_format/examples/experiment/dartfish_experiment.json -> build/bdist.linux-armv7l/wheel/starfish/spacetx_format/examples/experiment 2019-12-13T19:22:30 copying build/lib/starfish/spacetx_format/examples/experiment/experiment.json -> build/bdist.linux-armv7l/wheel/starfish/spacetx_format/examples/experiment 2019-12-13T19:22:30 copying build/lib/starfish/spacetx_format/examples/experiment/no_fov_manifest.json -> build/bdist.linux-armv7l/wheel/starfish/spacetx_format/examples/experiment 2019-12-13T19:22:30 creating build/bdist.linux-armv7l/wheel/starfish/spacetx_format/examples/field_of_view 2019-12-13T19:22:30 copying build/lib/starfish/spacetx_format/examples/field_of_view/coordinates_bad_z_single.json -> build/bdist.linux-armv7l/wheel/starfish/spacetx_format/examples/field_of_view 2019-12-13T19:22:30 copying build/lib/starfish/spacetx_format/examples/field_of_view/dartfish_field_of_view.json -> build/bdist.linux-armv7l/wheel/starfish/spacetx_format/examples/field_of_view 2019-12-13T19:22:30 copying build/lib/starfish/spacetx_format/examples/field_of_view/coordinates_bad_z_triple.json -> build/bdist.linux-armv7l/wheel/starfish/spacetx_format/examples/field_of_view 2019-12-13T19:22:30 copying build/lib/starfish/spacetx_format/examples/field_of_view/coordinates_bad_x_single.json -> build/bdist.linux-armv7l/wheel/starfish/spacetx_format/examples/field_of_view 2019-12-13T19:22:30 copying build/lib/starfish/spacetx_format/examples/field_of_view/coordinates_good_max.json -> build/bdist.linux-armv7l/wheel/starfish/spacetx_format/examples/field_of_view 2019-12-13T19:22:30 copying build/lib/starfish/spacetx_format/examples/field_of_view/dartfish_nuclei.json -> build/bdist.linux-armv7l/wheel/starfish/spacetx_format/examples/field_of_view 2019-12-13T19:22:30 copying build/lib/starfish/spacetx_format/examples/field_of_view/coordinates_bad_y_scalar.json -> build/bdist.linux-armv7l/wheel/starfish/spacetx_format/examples/field_of_view 2019-12-13T19:22:30 copying build/lib/starfish/spacetx_format/examples/field_of_view/field_of_view.json -> build/bdist.linux-armv7l/wheel/starfish/spacetx_format/examples/field_of_view 2019-12-13T19:22:30 copying build/lib/starfish/spacetx_format/examples/field_of_view/coordinates_bad_x_scalar.json -> build/bdist.linux-armv7l/wheel/starfish/spacetx_format/examples/field_of_view 2019-12-13T19:22:30 copying build/lib/starfish/spacetx_format/examples/field_of_view/coordinates_good_min.json -> build/bdist.linux-armv7l/wheel/starfish/spacetx_format/examples/field_of_view 2019-12-13T19:22:30 copying build/lib/starfish/spacetx_format/examples/field_of_view/too_large.json -> build/bdist.linux-armv7l/wheel/starfish/spacetx_format/examples/field_of_view 2019-12-13T19:22:30 copying build/lib/starfish/spacetx_format/examples/field_of_view/coordinates_bad_y_single.json -> build/bdist.linux-armv7l/wheel/starfish/spacetx_format/examples/field_of_view 2019-12-13T19:22:30 creating build/bdist.linux-armv7l/wheel/starfish/spacetx_format/examples/fov_manifest 2019-12-13T19:22:30 copying build/lib/starfish/spacetx_format/examples/fov_manifest/fov_manifest.json -> build/bdist.linux-armv7l/wheel/starfish/spacetx_format/examples/fov_manifest 2019-12-13T19:22:30 creating build/bdist.linux-armv7l/wheel/starfish/spacetx_format/examples/codebook 2019-12-13T19:22:30 copying build/lib/starfish/spacetx_format/examples/codebook/codebook.json -> build/bdist.linux-armv7l/wheel/starfish/spacetx_format/examples/codebook 2019-12-13T19:22:30 copying build/lib/starfish/spacetx_format/examples/codebook/codebook_diagonal.json -> build/bdist.linux-armv7l/wheel/starfish/spacetx_format/examples/codebook 2019-12-13T19:22:30 copying build/lib/starfish/spacetx_format/examples/codebook/codebook_diagonal_inferred_value.json -> build/bdist.linux-armv7l/wheel/starfish/spacetx_format/examples/codebook 2019-12-13T19:22:30 creating build/bdist.linux-armv7l/wheel/starfish/spacetx_format/schema 2019-12-13T19:22:30 copying build/lib/starfish/spacetx_format/schema/version.json -> build/bdist.linux-armv7l/wheel/starfish/spacetx_format/schema 2019-12-13T19:22:30 copying build/lib/starfish/spacetx_format/schema/fov_manifest_0.0.0.json -> build/bdist.linux-armv7l/wheel/starfish/spacetx_format/schema 2019-12-13T19:22:30 creating build/bdist.linux-armv7l/wheel/starfish/spacetx_format/schema/codebook_0.0.0 2019-12-13T19:22:30 copying build/lib/starfish/spacetx_format/schema/codebook_0.0.0/codeword.json -> build/bdist.linux-armv7l/wheel/starfish/spacetx_format/schema/codebook_0.0.0 2019-12-13T19:22:30 copying build/lib/starfish/spacetx_format/schema/codebook_0.0.0/codebook.json -> build/bdist.linux-armv7l/wheel/starfish/spacetx_format/schema/codebook_0.0.0 2019-12-13T19:22:30 creating build/bdist.linux-armv7l/wheel/starfish/spacetx_format/schema/field_of_view_0.1.0 2019-12-13T19:22:30 creating build/bdist.linux-armv7l/wheel/starfish/spacetx_format/schema/field_of_view_0.1.0/tiles 2019-12-13T19:22:30 copying build/lib/starfish/spacetx_format/schema/field_of_view_0.1.0/tiles/coordinates.json -> build/bdist.linux-armv7l/wheel/starfish/spacetx_format/schema/field_of_view_0.1.0/tiles 2019-12-13T19:22:30 copying build/lib/starfish/spacetx_format/schema/field_of_view_0.1.0/tiles/indices.json -> build/bdist.linux-armv7l/wheel/starfish/spacetx_format/schema/field_of_view_0.1.0/tiles 2019-12-13T19:22:30 copying build/lib/starfish/spacetx_format/schema/field_of_view_0.1.0/tiles/tiles.json -> build/bdist.linux-armv7l/wheel/starfish/spacetx_format/schema/field_of_view_0.1.0/tiles 2019-12-13T19:22:30 copying build/lib/starfish/spacetx_format/schema/field_of_view_0.1.0/field_of_view.json -> build/bdist.linux-armv7l/wheel/starfish/spacetx_format/schema/field_of_view_0.1.0 2019-12-13T19:22:30 copying build/lib/starfish/spacetx_format/schema/fov_manifest_0.1.0.json -> build/bdist.linux-armv7l/wheel/starfish/spacetx_format/schema 2019-12-13T19:22:30 creating build/bdist.linux-armv7l/wheel/starfish/spacetx_format/schema/field_of_view_0.0.0 2019-12-13T19:22:30 creating build/bdist.linux-armv7l/wheel/starfish/spacetx_format/schema/field_of_view_0.0.0/tiles 2019-12-13T19:22:30 copying build/lib/starfish/spacetx_format/schema/field_of_view_0.0.0/tiles/coordinates.json -> build/bdist.linux-armv7l/wheel/starfish/spacetx_format/schema/field_of_view_0.0.0/tiles 2019-12-13T19:22:30 copying build/lib/starfish/spacetx_format/schema/field_of_view_0.0.0/tiles/indices.json -> build/bdist.linux-armv7l/wheel/starfish/spacetx_format/schema/field_of_view_0.0.0/tiles 2019-12-13T19:22:30 copying build/lib/starfish/spacetx_format/schema/field_of_view_0.0.0/tiles/tiles.json -> build/bdist.linux-armv7l/wheel/starfish/spacetx_format/schema/field_of_view_0.0.0/tiles 2019-12-13T19:22:30 copying build/lib/starfish/spacetx_format/schema/field_of_view_0.0.0/field_of_view.json -> build/bdist.linux-armv7l/wheel/starfish/spacetx_format/schema/field_of_view_0.0.0 2019-12-13T19:22:30 copying build/lib/starfish/spacetx_format/schema/experiment_4.0.0.json -> build/bdist.linux-armv7l/wheel/starfish/spacetx_format/schema 2019-12-13T19:22:30 copying build/lib/starfish/spacetx_format/schema/extras.json -> build/bdist.linux-armv7l/wheel/starfish/spacetx_format/schema 2019-12-13T19:22:30 copying build/lib/starfish/spacetx_format/schema/experiment_5.0.0.json -> build/bdist.linux-armv7l/wheel/starfish/spacetx_format/schema 2019-12-13T19:22:30 copying build/lib/starfish/config.py -> build/bdist.linux-armv7l/wheel/starfish 2019-12-13T19:22:30 creating build/bdist.linux-armv7l/wheel/starfish/test 2019-12-13T19:22:30 copying build/lib/starfish/test/__init__.py -> build/bdist.linux-armv7l/wheel/starfish/test 2019-12-13T19:22:30 creating build/bdist.linux-armv7l/wheel/starfish/test/full_pipelines 2019-12-13T19:22:30 creating build/bdist.linux-armv7l/wheel/starfish/test/full_pipelines/api 2019-12-13T19:22:30 copying build/lib/starfish/test/full_pipelines/api/test_dartfish.py -> build/bdist.linux-armv7l/wheel/starfish/test/full_pipelines/api 2019-12-13T19:22:30 copying build/lib/starfish/test/full_pipelines/api/test_iss_api.py -> build/bdist.linux-armv7l/wheel/starfish/test/full_pipelines/api 2019-12-13T19:22:30 copying build/lib/starfish/test/full_pipelines/api/test_allen_smFISH.py -> build/bdist.linux-armv7l/wheel/starfish/test/full_pipelines/api 2019-12-13T19:22:30 copying build/lib/starfish/test/full_pipelines/api/__init__.py -> build/bdist.linux-armv7l/wheel/starfish/test/full_pipelines/api 2019-12-13T19:22:30 copying build/lib/starfish/test/full_pipelines/api/test_merfish.py -> build/bdist.linux-armv7l/wheel/starfish/test/full_pipelines/api 2019-12-13T19:22:30 copying build/lib/starfish/test/full_pipelines/api/test_iss_doc_pipeline.py -> build/bdist.linux-armv7l/wheel/starfish/test/full_pipelines/api 2019-12-13T19:22:30 copying build/lib/starfish/test/full_pipelines/__init__.py -> build/bdist.linux-armv7l/wheel/starfish/test/full_pipelines 2019-12-13T19:22:30 copying build/lib/starfish/types.py -> build/bdist.linux-armv7l/wheel/starfish 2019-12-13T19:22:30 copying build/lib/starfish/morphology.py -> build/bdist.linux-armv7l/wheel/starfish 2019-12-13T19:22:30 copying build/lib/starfish/data.py -> build/bdist.linux-armv7l/wheel/starfish 2019-12-13T19:22:30 running install_egg_info 2019-12-13T19:22:30 Copying starfish.egg-info to build/bdist.linux-armv7l/wheel/starfish-0.1.10-py3.7.egg-info 2019-12-13T19:22:30 running install_scripts 2019-12-13T19:22:30 creating build/bdist.linux-armv7l/wheel/starfish-0.1.10.dist-info/WHEEL 2019-12-13T19:22:30 creating '/tmp/pip-wheel-j5wyt3z1/starfish-0.1.10-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2019-12-13T19:22:30 adding 'starfish/REQUIREMENTS-STRICT.txt' 2019-12-13T19:22:30 adding 'starfish/__init__.py' 2019-12-13T19:22:30 adding 'starfish/__main__.py' 2019-12-13T19:22:30 adding 'starfish/config.py' 2019-12-13T19:22:30 adding 'starfish/data.py' 2019-12-13T19:22:30 adding 'starfish/image.py' 2019-12-13T19:22:30 adding 'starfish/morphology.py' 2019-12-13T19:22:30 adding 'starfish/spots.py' 2019-12-13T19:22:30 adding 'starfish/types.py' 2019-12-13T19:22:30 adding 'starfish/core/__init__.py' 2019-12-13T19:22:30 adding 'starfish/core/_display.py' 2019-12-13T19:22:30 adding 'starfish/core/_version.py' 2019-12-13T19:22:30 adding 'starfish/core/compat.py' 2019-12-13T19:22:30 adding 'starfish/core/errors.py' 2019-12-13T19:22:30 adding 'starfish/core/starfish.py' 2019-12-13T19:22:30 adding 'starfish/core/codebook/__init__.py' 2019-12-13T19:22:30 adding 'starfish/core/codebook/_format.py' 2019-12-13T19:22:30 adding 'starfish/core/codebook/codebook.py' 2019-12-13T19:22:30 adding 'starfish/core/codebook/test/__init__.py' 2019-12-13T19:22:30 adding 'starfish/core/codebook/test/factories.py' 2019-12-13T19:22:30 adding 'starfish/core/codebook/test/test_approximate_nearest_code.py' 2019-12-13T19:22:30 adding 'starfish/core/codebook/test/test_code_length.py' 2019-12-13T19:22:30 adding 'starfish/core/codebook/test/test_from_code_array.py' 2019-12-13T19:22:30 adding 'starfish/core/codebook/test/test_metric_decode.py' 2019-12-13T19:22:30 adding 'starfish/core/codebook/test/test_normalize_code_traces.py' 2019-12-13T19:22:30 adding 'starfish/core/codebook/test/test_per_round_max_decode.py' 2019-12-13T19:22:30 adding 'starfish/core/codebook/test/test_synthetic_one_hot_codebook.py' 2019-12-13T19:22:30 adding 'starfish/core/codebook/test/test_to_json.py' 2019-12-13T19:22:30 adding 'starfish/core/config/__init__.py' 2019-12-13T19:22:30 adding 'starfish/core/config/test/__init__.py' 2019-12-13T19:22:30 adding 'starfish/core/config/test/test_config.py' 2019-12-13T19:22:30 adding 'starfish/core/experiment/__init__.py' 2019-12-13T19:22:30 adding 'starfish/core/experiment/experiment.py' 2019-12-13T19:22:30 adding 'starfish/core/experiment/version.py' 2019-12-13T19:22:30 adding 'starfish/core/experiment/builder/__init__.py' 2019-12-13T19:22:30 adding 'starfish/core/experiment/builder/defaultproviders.py' 2019-12-13T19:22:30 adding 'starfish/core/experiment/builder/inplace.py' 2019-12-13T19:22:30 adding 'starfish/core/experiment/builder/orderediterator.py' 2019-12-13T19:22:30 adding 'starfish/core/experiment/builder/providers.py' 2019-12-13T19:22:30 adding 'starfish/core/experiment/builder/structured_formatter.py' 2019-12-13T19:22:30 adding 'starfish/core/experiment/builder/test/__init__.py' 2019-12-13T19:22:30 adding 'starfish/core/experiment/builder/test/test_inplace.py' 2019-12-13T19:22:30 adding 'starfish/core/experiment/builder/test/test_orderediterator.py' 2019-12-13T19:22:30 adding 'starfish/core/experiment/builder/test/test_small_axis.py' 2019-12-13T19:22:30 adding 'starfish/core/experiment/builder/test/factories/__init__.py' 2019-12-13T19:22:30 adding 'starfish/core/experiment/builder/test/factories/all_purpose.py' 2019-12-13T19:22:30 adding 'starfish/core/experiment/builder/test/factories/unique_tiles.py' 2019-12-13T19:22:30 adding 'starfish/core/experiment/builder/test/structured_formatter/__init__.py' 2019-12-13T19:22:30 adding 'starfish/core/experiment/builder/test/structured_formatter/test_multiple_fov.py' 2019-12-13T19:22:30 adding 'starfish/core/experiment/builder/test/structured_formatter/test_single_fov.py' 2019-12-13T19:22:30 adding 'starfish/core/experiment/builder/test/structured_formatter/test_tilepath.py' 2019-12-13T19:22:30 adding 'starfish/core/experiment/builder/test/structured_formatter/util.py' 2019-12-13T19:22:30 adding 'starfish/core/experiment/test/__init__.py' 2019-12-13T19:22:30 adding 'starfish/core/experiment/test/test_experiment.py' 2019-12-13T19:22:30 adding 'starfish/core/experiment/test/test_version.py' 2019-12-13T19:22:30 adding 'starfish/core/expression_matrix/__init__.py' 2019-12-13T19:22:30 adding 'starfish/core/expression_matrix/concatenate.py' 2019-12-13T19:22:30 adding 'starfish/core/expression_matrix/expression_matrix.py' 2019-12-13T19:22:30 adding 'starfish/core/expression_matrix/test/__init__.py' 2019-12-13T19:22:30 adding 'starfish/core/expression_matrix/test/test_concatenate.py' 2019-12-13T19:22:30 adding 'starfish/core/expression_matrix/test/test_serialization.py' 2019-12-13T19:22:30 adding 'starfish/core/image/__init__.py' 2019-12-13T19:22:30 adding 'starfish/core/image/Filter/__init__.py' 2019-12-13T19:22:30 adding 'starfish/core/image/Filter/_base.py' 2019-12-13T19:22:30 adding 'starfish/core/image/Filter/bandpass.py' 2019-12-13T19:22:30 adding 'starfish/core/image/Filter/call_bases.py' 2019-12-13T19:22:30 adding 'starfish/core/image/Filter/clip.py' 2019-12-13T19:22:30 adding 'starfish/core/image/Filter/clip_percentile_to_zero.py' 2019-12-13T19:22:30 adding 'starfish/core/image/Filter/clip_value_to_zero.py' 2019-12-13T19:22:30 adding 'starfish/core/image/Filter/element_wise_mult.py' 2019-12-13T19:22:30 adding 'starfish/core/image/Filter/gaussian_high_pass.py' 2019-12-13T19:22:30 adding 'starfish/core/image/Filter/gaussian_low_pass.py' 2019-12-13T19:22:30 adding 'starfish/core/image/Filter/laplace.py' 2019-12-13T19:22:30 adding 'starfish/core/image/Filter/linear_unmixing.py' 2019-12-13T19:22:30 adding 'starfish/core/image/Filter/map.py' 2019-12-13T19:22:30 adding 'starfish/core/image/Filter/match_histograms.py' 2019-12-13T19:22:30 adding 'starfish/core/image/Filter/mean_high_pass.py' 2019-12-13T19:22:30 adding 'starfish/core/image/Filter/reduce.py' 2019-12-13T19:22:30 adding 'starfish/core/image/Filter/richardson_lucy_deconvolution.py' 2019-12-13T19:22:30 adding 'starfish/core/image/Filter/util.py' 2019-12-13T19:22:30 adding 'starfish/core/image/Filter/white_tophat.py' 2019-12-13T19:22:30 adding 'starfish/core/image/Filter/zero_by_channel_magnitude.py' 2019-12-13T19:22:30 adding 'starfish/core/image/Filter/test/__init__.py' 2019-12-13T19:22:30 adding 'starfish/core/image/Filter/test/test_api_contract.py' 2019-12-13T19:22:30 adding 'starfish/core/image/Filter/test/test_call_bases.py' 2019-12-13T19:22:30 adding 'starfish/core/image/Filter/test/test_filter.py' 2019-12-13T19:22:30 adding 'starfish/core/image/Filter/test/test_histogram_matching.py' 2019-12-13T19:22:30 adding 'starfish/core/image/Filter/test/test_linear_unmixing.py' 2019-12-13T19:22:30 adding 'starfish/core/image/Filter/test/test_map.py' 2019-12-13T19:22:30 adding 'starfish/core/image/Filter/test/test_reduce.py' 2019-12-13T19:22:30 adding 'starfish/core/image/Filter/test/test_white_tophat.py' 2019-12-13T19:22:30 adding 'starfish/core/image/Filter/test/test_zero_by_channel_magnitude.py' 2019-12-13T19:22:30 adding 'starfish/core/image/Segment/__init__.py' 2019-12-13T19:22:30 adding 'starfish/core/image/Segment/_base.py' 2019-12-13T19:22:30 adding 'starfish/core/image/Segment/watershed.py' 2019-12-13T19:22:30 adding 'starfish/core/image/_registration/__init__.py' 2019-12-13T19:22:30 adding 'starfish/core/image/_registration/_format.py' 2019-12-13T19:22:30 adding 'starfish/core/image/_registration/transforms_list.py' 2019-12-13T19:22:30 adding 'starfish/core/image/_registration/ApplyTransform/__init__.py' 2019-12-13T19:22:30 adding 'starfish/core/image/_registration/ApplyTransform/_base.py' 2019-12-13T19:22:30 adding 'starfish/core/image/_registration/ApplyTransform/warp.py' 2019-12-13T19:22:30 adding 'starfish/core/image/_registration/ApplyTransform/test/__init__.py' 2019-12-13T19:22:30 adding 'starfish/core/image/_registration/ApplyTransform/test/test_warp.py' 2019-12-13T19:22:30 adding 'starfish/core/image/_registration/LearnTransform/__init__.py' 2019-12-13T19:22:30 adding 'starfish/core/image/_registration/LearnTransform/_base.py' 2019-12-13T19:22:30 adding 'starfish/core/image/_registration/LearnTransform/translation.py' 2019-12-13T19:22:30 adding 'starfish/core/image/_registration/LearnTransform/test/__init__.py' 2019-12-13T19:22:30 adding 'starfish/core/image/_registration/LearnTransform/test/test_translation.py' 2019-12-13T19:22:30 adding 'starfish/core/image/_registration/test/__init__.py' 2019-12-13T19:22:30 adding 'starfish/core/image/_registration/test/test_transforms_list.py' 2019-12-13T19:22:30 adding 'starfish/core/imagestack/__init__.py' 2019-12-13T19:22:30 adding 'starfish/core/imagestack/dataorder.py' 2019-12-13T19:22:30 adding 'starfish/core/imagestack/imagestack.py' 2019-12-13T19:22:30 adding 'starfish/core/imagestack/indexing_utils.py' 2019-12-13T19:22:30 adding 'starfish/core/imagestack/physical_coordinates.py' 2019-12-13T19:22:30 adding 'starfish/core/imagestack/parser/__init__.py' 2019-12-13T19:22:30 adding 'starfish/core/imagestack/parser/_key.py' 2019-12-13T19:22:30 adding 'starfish/core/imagestack/parser/_tiledata.py' 2019-12-13T19:22:30 adding 'starfish/core/imagestack/parser/crop.py' 2019-12-13T19:22:30 adding 'starfish/core/imagestack/parser/numpy/__init__.py' 2019-12-13T19:22:30 adding 'starfish/core/imagestack/parser/tileset/__init__.py' 2019-12-13T19:22:30 adding 'starfish/core/imagestack/parser/tileset/_parser.py' 2019-12-13T19:22:30 adding 'starfish/core/imagestack/test/__init__.py' 2019-12-13T19:22:30 adding 'starfish/core/imagestack/test/imagestack_test_utils.py' 2019-12-13T19:22:30 adding 'starfish/core/imagestack/test/test_apply.py' 2019-12-13T19:22:30 adding 'starfish/core/imagestack/test/test_coordinates.py' 2019-12-13T19:22:30 adding 'starfish/core/imagestack/test/test_cropped_load.py' 2019-12-13T19:22:30 adding 'starfish/core/imagestack/test/test_export.py' 2019-12-13T19:22:30 adding 'starfish/core/imagestack/test/test_from_numpy_array.py' 2019-12-13T19:22:30 adding 'starfish/core/imagestack/test/test_index.py' 2019-12-13T19:22:30 adding 'starfish/core/imagestack/test/test_labeled_indices.py' 2019-12-13T19:22:30 adding 'starfish/core/imagestack/test/test_max_proj.py' 2019-12-13T19:22:30 adding 'starfish/core/imagestack/test/test_metadata.py' 2019-12-13T19:22:30 adding 'starfish/core/imagestack/test/test_physical_coordinate_calculator.py' 2019-12-13T19:22:30 adding 'starfish/core/imagestack/test/test_slice_ops.py' 2019-12-13T19:22:30 adding 'starfish/core/imagestack/test/test_slicedimage_dtype.py' 2019-12-13T19:22:30 adding 'starfish/core/imagestack/test/factories/__init__.py' 2019-12-13T19:22:30 adding 'starfish/core/imagestack/test/factories/all_purpose.py' 2019-12-13T19:22:30 adding 'starfish/core/imagestack/test/factories/from_codebook.py' 2019-12-13T19:22:30 adding 'starfish/core/imagestack/test/factories/synthetic_stack.py' 2019-12-13T19:22:30 adding 'starfish/core/imagestack/test/factories/unique_tiles.py' 2019-12-13T19:22:30 adding 'starfish/core/imagestack/test/factories/with_coords.py' 2019-12-13T19:22:30 adding 'starfish/core/intensity_table/__init__.py' 2019-12-13T19:22:30 adding 'starfish/core/intensity_table/concatenate.py' 2019-12-13T19:22:30 adding 'starfish/core/intensity_table/decoded_intensity_table.py' 2019-12-13T19:22:30 adding 'starfish/core/intensity_table/intensity_table.py' 2019-12-13T19:22:30 adding 'starfish/core/intensity_table/intensity_table_coordinates.py' 2019-12-13T19:22:30 adding 'starfish/core/intensity_table/overlap.py' 2019-12-13T19:22:30 adding 'starfish/core/intensity_table/test/__init__.py' 2019-12-13T19:22:30 adding 'starfish/core/intensity_table/test/factories.py' 2019-12-13T19:22:30 adding 'starfish/core/intensity_table/test/test_concatenate.py' 2019-12-13T19:22:30 adding 'starfish/core/intensity_table/test/test_empty_intensity_table.py' 2019-12-13T19:22:30 adding 'starfish/core/intensity_table/test/test_from_imagestack.py' 2019-12-13T19:22:30 adding 'starfish/core/intensity_table/test/test_from_spot_data.py' 2019-12-13T19:22:30 adding 'starfish/core/intensity_table/test/test_intensity_table_coords.py' 2019-12-13T19:22:30 adding 'starfish/core/intensity_table/test/test_intensity_table_serialization.py' 2019-12-13T19:22:30 adding 'starfish/core/intensity_table/test/test_overlap.py' 2019-12-13T19:22:30 adding 'starfish/core/intensity_table/test/test_stack_intensity_table_reshaping.py' 2019-12-13T19:22:30 adding 'starfish/core/intensity_table/test/test_synthetic_intensities.py' 2019-12-13T19:22:30 adding 'starfish/core/intensity_table/test/test_to_mermaid.py' 2019-12-13T19:22:30 adding 'starfish/core/morphology/__init__.py' 2019-12-13T19:22:30 adding 'starfish/core/morphology/util.py' 2019-12-13T19:22:30 adding 'starfish/core/morphology/Binarize/__init__.py' 2019-12-13T19:22:30 adding 'starfish/core/morphology/Binarize/_base.py' 2019-12-13T19:22:30 adding 'starfish/core/morphology/Binarize/threshold.py' 2019-12-13T19:22:30 adding 'starfish/core/morphology/Binarize/test/__init__.py' 2019-12-13T19:22:30 adding 'starfish/core/morphology/Binarize/test/test_threshold.py' 2019-12-13T19:22:30 adding 'starfish/core/morphology/Filter/__init__.py' 2019-12-13T19:22:30 adding 'starfish/core/morphology/Filter/_base.py' 2019-12-13T19:22:30 adding 'starfish/core/morphology/Filter/areafilter.py' 2019-12-13T19:22:30 adding 'starfish/core/morphology/Filter/map.py' 2019-12-13T19:22:30 adding 'starfish/core/morphology/Filter/min_distance_label.py' 2019-12-13T19:22:30 adding 'starfish/core/morphology/Filter/structural_label.py' 2019-12-13T19:22:30 adding 'starfish/core/morphology/Filter/test/__init__.py' 2019-12-13T19:22:30 adding 'starfish/core/morphology/Filter/test/test_areafilter.py' 2019-12-13T19:22:30 adding 'starfish/core/morphology/Filter/test/test_map.py' 2019-12-13T19:22:30 adding 'starfish/core/morphology/binary_mask/__init__.py' 2019-12-13T19:22:30 adding 'starfish/core/morphology/binary_mask/_io.py' 2019-12-13T19:22:30 adding 'starfish/core/morphology/binary_mask/binary_mask.py' 2019-12-13T19:22:30 adding 'starfish/core/morphology/binary_mask/expand.py' 2019-12-13T19:22:31 adding 'starfish/core/morphology/binary_mask/test/__init__.py' 2019-12-13T19:22:31 adding 'starfish/core/morphology/binary_mask/test/factories.py' 2019-12-13T19:22:31 adding 'starfish/core/morphology/binary_mask/test/test_binary_mask.py' 2019-12-13T19:22:31 adding 'starfish/core/morphology/binary_mask/test/test_expand.py' 2019-12-13T19:22:31 adding 'starfish/core/morphology/binary_mask/test/test_from_binary_arrays_and_ticks.py' 2019-12-13T19:22:31 adding 'starfish/core/morphology/binary_mask/test/test_from_label_array_and_ticks.py' 2019-12-13T19:22:31 adding 'starfish/core/morphology/label_image/__init__.py' 2019-12-13T19:22:31 adding 'starfish/core/morphology/label_image/label_image.py' 2019-12-13T19:22:31 adding 'starfish/core/morphology/label_image/test/__init__.py' 2019-12-13T19:22:31 adding 'starfish/core/morphology/label_image/test/test_label_image.py' 2019-12-13T19:22:31 adding 'starfish/core/pipeline/__init__.py' 2019-12-13T19:22:31 adding 'starfish/core/pipeline/algorithmbase.py' 2019-12-13T19:22:31 adding 'starfish/core/segmentation_mask/__init__.py' 2019-12-13T19:22:31 adding 'starfish/core/segmentation_mask/segmentation_mask.py' 2019-12-13T19:22:31 adding 'starfish/core/spacetx_format/__init__.py' 2019-12-13T19:22:31 adding 'starfish/core/spacetx_format/cli.py' 2019-12-13T19:22:31 adding 'starfish/core/spacetx_format/test_codebook.py' 2019-12-13T19:22:31 adding 'starfish/core/spacetx_format/test_coordinates.py' 2019-12-13T19:22:31 adding 'starfish/core/spacetx_format/test_experiment.py' 2019-12-13T19:22:31 adding 'starfish/core/spacetx_format/test_field_of_view.py' 2019-12-13T19:22:31 adding 'starfish/core/spacetx_format/test_fov_manifest.py' 2019-12-13T19:22:31 adding 'starfish/core/spacetx_format/test_fuzz.py' 2019-12-13T19:22:31 adding 'starfish/core/spacetx_format/util.py' 2019-12-13T19:22:31 adding 'starfish/core/spacetx_format/validate_sptx.py' 2019-12-13T19:22:31 adding 'starfish/core/spots/__init__.py' 2019-12-13T19:22:31 adding 'starfish/core/spots/AssignTargets/__init__.py' 2019-12-13T19:22:31 adding 'starfish/core/spots/AssignTargets/_base.py' 2019-12-13T19:22:31 adding 'starfish/core/spots/AssignTargets/label.py' 2019-12-13T19:22:31 adding 'starfish/core/spots/DecodeSpots/__init__.py' 2019-12-13T19:22:31 adding 'starfish/core/spots/DecodeSpots/_base.py' 2019-12-13T19:22:31 adding 'starfish/core/spots/DecodeSpots/metric_decoder.py' 2019-12-13T19:22:31 adding 'starfish/core/spots/DecodeSpots/per_round_max_channel_decoder.py' 2019-12-13T19:22:31 adding 'starfish/core/spots/DecodeSpots/simple_lookup_decoder.py' 2019-12-13T19:22:31 adding 'starfish/core/spots/DecodeSpots/trace_builders.py' 2019-12-13T19:22:31 adding 'starfish/core/spots/DecodeSpots/util.py' 2019-12-13T19:22:31 adding 'starfish/core/spots/DecodeSpots/test/__init__.py' 2019-12-13T19:22:31 adding 'starfish/core/spots/DecodeSpots/test/test_composite_codebook.py' 2019-12-13T19:22:31 adding 'starfish/core/spots/DecodeSpots/test/test_decoding_without_spots.py' 2019-12-13T19:22:31 adding 'starfish/core/spots/DecodeSpots/test/test_nearest_neighbor_trace_builder.py' 2019-12-13T19:22:31 adding 'starfish/core/spots/DecodeSpots/test/test_trace_builders.py' 2019-12-13T19:22:31 adding 'starfish/core/spots/DetectPixels/__init__.py' 2019-12-13T19:22:31 adding 'starfish/core/spots/DetectPixels/_base.py' 2019-12-13T19:22:31 adding 'starfish/core/spots/DetectPixels/combine_adjacent_features.py' 2019-12-13T19:22:31 adding 'starfish/core/spots/DetectPixels/pixel_spot_decoder.py' 2019-12-13T19:22:31 adding 'starfish/core/spots/DetectPixels/test/__init__.py' 2019-12-13T19:22:31 adding 'starfish/core/spots/DetectPixels/test/test_calculate_mean_pixel_traces.py' 2019-12-13T19:22:31 adding 'starfish/core/spots/DetectPixels/test/test_create_spot_attributes.py' 2019-12-13T19:22:31 adding 'starfish/core/spots/DetectPixels/test/test_intensities_to_decoded_image.py' 2019-12-13T19:22:31 adding 'starfish/core/spots/DetectPixels/test/test_targets_map.py' 2019-12-13T19:22:31 adding 'starfish/core/spots/FindSpots/__init__.py' 2019-12-13T19:22:31 adding 'starfish/core/spots/FindSpots/_base.py' 2019-12-13T19:22:31 adding 'starfish/core/spots/FindSpots/blob.py' 2019-12-13T19:22:31 adding 'starfish/core/spots/FindSpots/local_max_peak_finder.py' 2019-12-13T19:22:31 adding 'starfish/core/spots/FindSpots/spot_finding_utils.py' 2019-12-13T19:22:31 adding 'starfish/core/spots/FindSpots/trackpy_local_max_peak_finder.py' 2019-12-13T19:22:31 adding 'starfish/core/spots/FindSpots/test/__init__.py' 2019-12-13T19:22:31 adding 'starfish/core/spots/FindSpots/test/test_spot_detection.py' 2019-12-13T19:22:31 adding 'starfish/core/spots/FindSpots/test/test_synthetic_data.py' 2019-12-13T19:22:31 adding 'starfish/core/test/__init__.py' 2019-12-13T19:22:31 adding 'starfish/core/test/factories.py' 2019-12-13T19:22:31 adding 'starfish/core/test/test_display.py' 2019-12-13T19:22:31 adding 'starfish/core/test/test_multiprocessing_workflow.py' 2019-12-13T19:22:31 adding 'starfish/core/test/test_synthetic_spot_creation.py' 2019-12-13T19:22:31 adding 'starfish/core/types/__init__.py' 2019-12-13T19:22:31 adding 'starfish/core/types/_constants.py' 2019-12-13T19:22:31 adding 'starfish/core/types/_decoded_spots.py' 2019-12-13T19:22:31 adding 'starfish/core/types/_functionsource.py' 2019-12-13T19:22:31 adding 'starfish/core/types/_spot_attributes.py' 2019-12-13T19:22:31 adding 'starfish/core/types/_spot_finding_results.py' 2019-12-13T19:22:31 adding 'starfish/core/types/_validated_table.py' 2019-12-13T19:22:31 adding 'starfish/core/types/test/__init__.py' 2019-12-13T19:22:31 adding 'starfish/core/types/test/test_decoded_spots.py' 2019-12-13T19:22:31 adding 'starfish/core/util/__init__.py' 2019-12-13T19:22:31 adding 'starfish/core/util/argparse.py' 2019-12-13T19:22:31 adding 'starfish/core/util/clock.py' 2019-12-13T19:22:31 adding 'starfish/core/util/config.py' 2019-12-13T19:22:31 adding 'starfish/core/util/enum.py' 2019-12-13T19:22:31 adding 'starfish/core/util/exec.py' 2019-12-13T19:22:31 adding 'starfish/core/util/levels.py' 2019-12-13T19:22:31 adding 'starfish/core/util/logging.py' 2019-12-13T19:22:31 adding 'starfish/core/util/try_import.py' 2019-12-13T19:22:31 adding 'starfish/core/util/click/__init__.py' 2019-12-13T19:22:31 adding 'starfish/core/util/test/__init__.py' 2019-12-13T19:22:31 adding 'starfish/core/util/test/test_levels.py' 2019-12-13T19:22:31 adding 'starfish/core/util/test/test_preserve_float_range.py' 2019-12-13T19:22:31 adding 'starfish/experiment/__init__.py' 2019-12-13T19:22:31 adding 'starfish/experiment/builder.py' 2019-12-13T19:22:31 adding 'starfish/spacetx_format/examples/codebook/codebook.json' 2019-12-13T19:22:31 adding 'starfish/spacetx_format/examples/codebook/codebook_diagonal.json' 2019-12-13T19:22:31 adding 'starfish/spacetx_format/examples/codebook/codebook_diagonal_inferred_value.json' 2019-12-13T19:22:31 adding 'starfish/spacetx_format/examples/experiment/dartfish_experiment.json' 2019-12-13T19:22:31 adding 'starfish/spacetx_format/examples/experiment/experiment.json' 2019-12-13T19:22:31 adding 'starfish/spacetx_format/examples/experiment/no_fov_manifest.json' 2019-12-13T19:22:31 adding 'starfish/spacetx_format/examples/field_of_view/coordinates_bad_x_scalar.json' 2019-12-13T19:22:31 adding 'starfish/spacetx_format/examples/field_of_view/coordinates_bad_x_single.json' 2019-12-13T19:22:31 adding 'starfish/spacetx_format/examples/field_of_view/coordinates_bad_y_scalar.json' 2019-12-13T19:22:31 adding 'starfish/spacetx_format/examples/field_of_view/coordinates_bad_y_single.json' 2019-12-13T19:22:31 adding 'starfish/spacetx_format/examples/field_of_view/coordinates_bad_z_single.json' 2019-12-13T19:22:31 adding 'starfish/spacetx_format/examples/field_of_view/coordinates_bad_z_triple.json' 2019-12-13T19:22:31 adding 'starfish/spacetx_format/examples/field_of_view/coordinates_good_max.json' 2019-12-13T19:22:31 adding 'starfish/spacetx_format/examples/field_of_view/coordinates_good_min.json' 2019-12-13T19:22:31 adding 'starfish/spacetx_format/examples/field_of_view/dartfish_field_of_view.json' 2019-12-13T19:22:31 adding 'starfish/spacetx_format/examples/field_of_view/dartfish_nuclei.json' 2019-12-13T19:22:31 adding 'starfish/spacetx_format/examples/field_of_view/field_of_view.json' 2019-12-13T19:22:31 adding 'starfish/spacetx_format/examples/field_of_view/too_large.json' 2019-12-13T19:22:31 adding 'starfish/spacetx_format/examples/fov_manifest/fov_manifest.json' 2019-12-13T19:22:31 adding 'starfish/spacetx_format/schema/experiment_4.0.0.json' 2019-12-13T19:22:31 adding 'starfish/spacetx_format/schema/experiment_5.0.0.json' 2019-12-13T19:22:31 adding 'starfish/spacetx_format/schema/extras.json' 2019-12-13T19:22:31 adding 'starfish/spacetx_format/schema/fov_manifest_0.0.0.json' 2019-12-13T19:22:31 adding 'starfish/spacetx_format/schema/fov_manifest_0.1.0.json' 2019-12-13T19:22:31 adding 'starfish/spacetx_format/schema/version.json' 2019-12-13T19:22:31 adding 'starfish/spacetx_format/schema/codebook_0.0.0/codebook.json' 2019-12-13T19:22:31 adding 'starfish/spacetx_format/schema/codebook_0.0.0/codeword.json' 2019-12-13T19:22:31 adding 'starfish/spacetx_format/schema/field_of_view_0.0.0/field_of_view.json' 2019-12-13T19:22:31 adding 'starfish/spacetx_format/schema/field_of_view_0.0.0/tiles/coordinates.json' 2019-12-13T19:22:31 adding 'starfish/spacetx_format/schema/field_of_view_0.0.0/tiles/indices.json' 2019-12-13T19:22:31 adding 'starfish/spacetx_format/schema/field_of_view_0.0.0/tiles/tiles.json' 2019-12-13T19:22:31 adding 'starfish/spacetx_format/schema/field_of_view_0.1.0/field_of_view.json' 2019-12-13T19:22:31 adding 'starfish/spacetx_format/schema/field_of_view_0.1.0/tiles/coordinates.json' 2019-12-13T19:22:31 adding 'starfish/spacetx_format/schema/field_of_view_0.1.0/tiles/indices.json' 2019-12-13T19:22:31 adding 'starfish/spacetx_format/schema/field_of_view_0.1.0/tiles/tiles.json' 2019-12-13T19:22:31 adding 'starfish/test/__init__.py' 2019-12-13T19:22:31 adding 'starfish/test/full_pipelines/__init__.py' 2019-12-13T19:22:31 adding 'starfish/test/full_pipelines/api/__init__.py' 2019-12-13T19:22:31 adding 'starfish/test/full_pipelines/api/test_allen_smFISH.py' 2019-12-13T19:22:31 adding 'starfish/test/full_pipelines/api/test_dartfish.py' 2019-12-13T19:22:31 adding 'starfish/test/full_pipelines/api/test_iss_api.py' 2019-12-13T19:22:31 adding 'starfish/test/full_pipelines/api/test_iss_doc_pipeline.py' 2019-12-13T19:22:31 adding 'starfish/test/full_pipelines/api/test_merfish.py' 2019-12-13T19:22:31 adding 'starfish/util/__init__.py' 2019-12-13T19:22:31 adding 'starfish/util/plot.py' 2019-12-13T19:22:31 adding 'starfish-0.1.10.dist-info/METADATA' 2019-12-13T19:22:31 adding 'starfish-0.1.10.dist-info/WHEEL' 2019-12-13T19:22:31 adding 'starfish-0.1.10.dist-info/entry_points.txt' 2019-12-13T19:22:31 adding 'starfish-0.1.10.dist-info/top_level.txt' 2019-12-13T19:22:31 adding 'starfish-0.1.10.dist-info/RECORD' 2019-12-13T19:22:31 removing build/bdist.linux-armv7l/wheel 2019-12-13T19:22:31 Building wheel for starfish (setup.py): finished with status 'done' 2019-12-13T19:22:31 Stored in directory: /tmp/tmp5uw0dh_l 2019-12-13T19:22:31 Successfully built starfish 2019-12-13T19:22:31 Cleaning up... 2019-12-13T19:22:31 Removing source in /tmp/pip-wheel-8gknoa_7/starfish 2019-12-13T19:22:32 Removed build tracker '/tmp/pip-req-tracker-unt7c6zt'