2020-01-23T14:14:30 Created temporary directory: /tmp/pip-ephem-wheel-cache-zaaump5_
2020-01-23T14:14:30 Created temporary directory: /tmp/pip-req-tracker-epe8_tnm
2020-01-23T14:14:30 Created requirements tracker '/tmp/pip-req-tracker-epe8_tnm'
2020-01-23T14:14:30 Created temporary directory: /tmp/pip-wheel-hzid0iuy
2020-01-23T14:14:30 Collecting pomoxis==0.3.1
2020-01-23T14:14:30   1 location(s) to search for versions of pomoxis:
2020-01-23T14:14:30   * https://pypi.org/simple/pomoxis/
2020-01-23T14:14:30   Getting page https://pypi.org/simple/pomoxis/
2020-01-23T14:14:30   Analyzing links from page https://pypi.org/simple/pomoxis/
2020-01-23T14:14:31     Found link https://files.pythonhosted.org/packages/c0/59/a56134534e8982b057c383eb347cf395305c28c3fcd47e42ca3866401212/pomoxis-0.2.2a1.tar.gz#sha256=62f5121020ce00f056714240d50d580d0c23a64d502a80ea529d431655367e88 (from https://pypi.org/simple/pomoxis/) (requires-python:>=3.5.2, <3.7), version: 0.2.2a1
2020-01-23T14:14:31     Found link https://files.pythonhosted.org/packages/7f/90/ed673752a756a3477dcc242f938c46aa7fabd7e9a061438a8606c3a99e6e/pomoxis-0.2.2a2.tar.gz#sha256=cfed0307424929a9bb1e44f6acd2e1d8b5741532581ae38ce510d565979247c6 (from https://pypi.org/simple/pomoxis/) (requires-python:>=3.5.2, <3.7), version: 0.2.2a2
2020-01-23T14:14:31     Found link https://files.pythonhosted.org/packages/45/15/4b49595826cc4975e73952c5416a72c994477a5e7b099976577d88f105df/pomoxis-0.2.2.tar.gz#sha256=4001024e7c2b200e4924c2924f3c423e3f7464b51501619b3c310f51b5120df9 (from https://pypi.org/simple/pomoxis/) (requires-python:>=3.5.2, <3.7), version: 0.2.2
2020-01-23T14:14:31     Found link https://files.pythonhosted.org/packages/79/63/59892ab3f851f6088ba6c5f97fc1e871cbf6ce6e310b8da1e54d4d1427c1/pomoxis-0.2.3.tar.gz#sha256=e87e632ca3ef172590e059ddb7282d933294439ef71c3df67d9b56a969a45b8d (from https://pypi.org/simple/pomoxis/) (requires-python:>=3.5.2, <3.7), version: 0.2.3
2020-01-23T14:14:31     Found link https://files.pythonhosted.org/packages/fa/d1/392448c751e2c024e51075f04d81067530d326e33a36dd6726f617bb3b4d/pomoxis-0.2.4.tar.gz#sha256=2f4a45d1bc48725a24ede76b07cd66bb9432e0b382685f4ea0abc4715eb96fc2 (from https://pypi.org/simple/pomoxis/) (requires-python:>=3.5.2, <3.7), version: 0.2.4
2020-01-23T14:14:31     Found link https://files.pythonhosted.org/packages/2d/53/aac67c49cd9c3e371dfe4ae88674d68271e8d5eb3d53111edb4c44efa4d0/pomoxis-0.2.5.tar.gz#sha256=014894e06e107701593d2d470785f9ac940a6907a456cae1b2e65447f0bcf2e9 (from https://pypi.org/simple/pomoxis/) (requires-python:>=3.5.2, <3.7), version: 0.2.5
2020-01-23T14:14:31     Found link https://files.pythonhosted.org/packages/c1/4b/6b3e8a6407ddacfc1d8e4f22482eb2edf3ab34fe830a83bf2d4003302499/pomoxis-0.3.0a1.tar.gz#sha256=d19daeeff38498c5b270c49a3796c459b3506e0188a79b80de6a5fde914db7fd (from https://pypi.org/simple/pomoxis/) (requires-python:>=3.5.2, <3.7), version: 0.3.0a1
2020-01-23T14:14:31     Found link https://files.pythonhosted.org/packages/34/ec/2b29e6232c6b4ba278071f99ee5e6804d6a751887cd4e0302f12692ac4c4/pomoxis-0.3.0.tar.gz#sha256=945ed681b1bfc6e22c0c217b6c7854762408718ee5bd29732ce1aa2b8fb873a2 (from https://pypi.org/simple/pomoxis/) (requires-python:>=3.5.2, <3.7), version: 0.3.0
2020-01-23T14:14:31     Found link https://files.pythonhosted.org/packages/da/76/32271d7ddec228f6d9b1ed618fc602f51a26d20e3bea7c06ae9bae74f6a0/pomoxis-0.3.1.tar.gz#sha256=08cec3223b638480187605bb0a3a46e9c09fc401a050e292156c4e56b839564a (from https://pypi.org/simple/pomoxis/) (requires-python:>=3.5.2, <3.7), version: 0.3.1
2020-01-23T14:14:31   Using version 0.3.1 (newest of versions: 0.3.1)
2020-01-23T14:14:31   Created temporary directory: /tmp/pip-unpack-424ihz1v
2020-01-23T14:14:31   Downloading https://files.pythonhosted.org/packages/da/76/32271d7ddec228f6d9b1ed618fc602f51a26d20e3bea7c06ae9bae74f6a0/pomoxis-0.3.1.tar.gz (85kB)
2020-01-23T14:14:31   Downloading from URL https://files.pythonhosted.org/packages/da/76/32271d7ddec228f6d9b1ed618fc602f51a26d20e3bea7c06ae9bae74f6a0/pomoxis-0.3.1.tar.gz#sha256=08cec3223b638480187605bb0a3a46e9c09fc401a050e292156c4e56b839564a (from https://pypi.org/simple/pomoxis/) (requires-python:>=3.5.2, <3.7)
2020-01-23T14:14:31   Added pomoxis==0.3.1 from https://files.pythonhosted.org/packages/da/76/32271d7ddec228f6d9b1ed618fc602f51a26d20e3bea7c06ae9bae74f6a0/pomoxis-0.3.1.tar.gz#sha256=08cec3223b638480187605bb0a3a46e9c09fc401a050e292156c4e56b839564a to build tracker '/tmp/pip-req-tracker-epe8_tnm'
2020-01-23T14:14:31     Running setup.py (path:/tmp/pip-wheel-hzid0iuy/pomoxis/setup.py) egg_info for package pomoxis
2020-01-23T14:14:31     Running command python setup.py egg_info
2020-01-23T14:14:33     running egg_info
2020-01-23T14:14:33     creating pip-egg-info/pomoxis.egg-info
2020-01-23T14:14:33     writing top-level names to pip-egg-info/pomoxis.egg-info/top_level.txt
2020-01-23T14:14:33     writing entry points to pip-egg-info/pomoxis.egg-info/entry_points.txt
2020-01-23T14:14:33     writing requirements to pip-egg-info/pomoxis.egg-info/requires.txt
2020-01-23T14:14:33     writing pip-egg-info/pomoxis.egg-info/PKG-INFO
2020-01-23T14:14:33     writing dependency_links to pip-egg-info/pomoxis.egg-info/dependency_links.txt
2020-01-23T14:14:33     writing manifest file 'pip-egg-info/pomoxis.egg-info/SOURCES.txt'
2020-01-23T14:14:34     reading manifest file 'pip-egg-info/pomoxis.egg-info/SOURCES.txt'
2020-01-23T14:14:34     reading manifest template 'MANIFEST.in'
2020-01-23T14:14:34     no previously-included directories found matching 'build'
2020-01-23T14:14:34     no previously-included directories found matching 'docs'
2020-01-23T14:14:34     writing manifest file 'pip-egg-info/pomoxis.egg-info/SOURCES.txt'
2020-01-23T14:14:34   Source in /tmp/pip-wheel-hzid0iuy/pomoxis has version 0.3.1, which satisfies requirement pomoxis==0.3.1 from https://files.pythonhosted.org/packages/da/76/32271d7ddec228f6d9b1ed618fc602f51a26d20e3bea7c06ae9bae74f6a0/pomoxis-0.3.1.tar.gz#sha256=08cec3223b638480187605bb0a3a46e9c09fc401a050e292156c4e56b839564a
2020-01-23T14:14:34   Removed pomoxis==0.3.1 from https://files.pythonhosted.org/packages/da/76/32271d7ddec228f6d9b1ed618fc602f51a26d20e3bea7c06ae9bae74f6a0/pomoxis-0.3.1.tar.gz#sha256=08cec3223b638480187605bb0a3a46e9c09fc401a050e292156c4e56b839564a from build tracker '/tmp/pip-req-tracker-epe8_tnm'
2020-01-23T14:14:34 Building wheels for collected packages: pomoxis
2020-01-23T14:14:34   Created temporary directory: /tmp/pip-wheel-u2xmozrh
2020-01-23T14:14:34   Building wheel for pomoxis (setup.py): started
2020-01-23T14:14:34   Destination directory: /tmp/pip-wheel-u2xmozrh
2020-01-23T14:14:34   Running command /usr/bin/python3 -u -c 'import setuptools, tokenize;__file__='"'"'/tmp/pip-wheel-hzid0iuy/pomoxis/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-u2xmozrh
2020-01-23T14:14:36   running bdist_wheel
2020-01-23T14:14:36   running build
2020-01-23T14:14:36   running build_py
2020-01-23T14:14:36   creating build
2020-01-23T14:14:36   creating build/lib
2020-01-23T14:14:36   creating build/lib/pomoxis
2020-01-23T14:14:36   copying pomoxis/util.py -> build/lib/pomoxis
2020-01-23T14:14:36   copying pomoxis/stats_from_bam.py -> build/lib/pomoxis
2020-01-23T14:14:36   copying pomoxis/subsample_bam.py -> build/lib/pomoxis
2020-01-23T14:14:36   copying pomoxis/assess_homopolymers.py -> build/lib/pomoxis
2020-01-23T14:14:36   copying pomoxis/summary_from_stats.py -> build/lib/pomoxis
2020-01-23T14:14:36   copying pomoxis/trim_alignments.py -> build/lib/pomoxis
2020-01-23T14:14:36   copying pomoxis/coverage_from_bam.py -> build/lib/pomoxis
2020-01-23T14:14:36   copying pomoxis/bio.py -> build/lib/pomoxis
2020-01-23T14:14:36   copying pomoxis/ref_seqs_from_bam.py -> build/lib/pomoxis
2020-01-23T14:14:36   copying pomoxis/find_indels.py -> build/lib/pomoxis
2020-01-23T14:14:36   copying pomoxis/__init__.py -> build/lib/pomoxis
2020-01-23T14:14:36   copying pomoxis/qscores_from_summary.py -> build/lib/pomoxis
2020-01-23T14:14:36   copying pomoxis/catalogue_errors.py -> build/lib/pomoxis
2020-01-23T14:14:36   copying pomoxis/common_errors_from_bam.py -> build/lib/pomoxis
2020-01-23T14:14:36   running build_scripts
2020-01-23T14:14:36   creating build/scripts-3.5
2020-01-23T14:14:36   copying scripts/assess_assembly -> build/scripts-3.5
2020-01-23T14:14:36   copying scripts/intersect_assembly_errors -> build/scripts-3.5
2020-01-23T14:14:36   copying scripts/mini_align -> build/scripts-3.5
2020-01-23T14:14:36   copying scripts/mini_assemble -> build/scripts-3.5
2020-01-23T14:14:36   installing to build/bdist.linux-armv7l/wheel
2020-01-23T14:14:36   running install
2020-01-23T14:14:36   running install_lib
2020-01-23T14:14:36   creating build/bdist.linux-armv7l
2020-01-23T14:14:36   creating build/bdist.linux-armv7l/wheel
2020-01-23T14:14:36   creating build/bdist.linux-armv7l/wheel/pomoxis
2020-01-23T14:14:36   copying build/lib/pomoxis/util.py -> build/bdist.linux-armv7l/wheel/pomoxis
2020-01-23T14:14:36   copying build/lib/pomoxis/stats_from_bam.py -> build/bdist.linux-armv7l/wheel/pomoxis
2020-01-23T14:14:36   copying build/lib/pomoxis/subsample_bam.py -> build/bdist.linux-armv7l/wheel/pomoxis
2020-01-23T14:14:36   copying build/lib/pomoxis/assess_homopolymers.py -> build/bdist.linux-armv7l/wheel/pomoxis
2020-01-23T14:14:36   copying build/lib/pomoxis/summary_from_stats.py -> build/bdist.linux-armv7l/wheel/pomoxis
2020-01-23T14:14:36   copying build/lib/pomoxis/trim_alignments.py -> build/bdist.linux-armv7l/wheel/pomoxis
2020-01-23T14:14:36   copying build/lib/pomoxis/coverage_from_bam.py -> build/bdist.linux-armv7l/wheel/pomoxis
2020-01-23T14:14:36   copying build/lib/pomoxis/bio.py -> build/bdist.linux-armv7l/wheel/pomoxis
2020-01-23T14:14:36   copying build/lib/pomoxis/ref_seqs_from_bam.py -> build/bdist.linux-armv7l/wheel/pomoxis
2020-01-23T14:14:36   copying build/lib/pomoxis/find_indels.py -> build/bdist.linux-armv7l/wheel/pomoxis
2020-01-23T14:14:36   copying build/lib/pomoxis/__init__.py -> build/bdist.linux-armv7l/wheel/pomoxis
2020-01-23T14:14:36   copying build/lib/pomoxis/qscores_from_summary.py -> build/bdist.linux-armv7l/wheel/pomoxis
2020-01-23T14:14:36   copying build/lib/pomoxis/catalogue_errors.py -> build/bdist.linux-armv7l/wheel/pomoxis
2020-01-23T14:14:36   copying build/lib/pomoxis/common_errors_from_bam.py -> build/bdist.linux-armv7l/wheel/pomoxis
2020-01-23T14:14:36   running install_egg_info
2020-01-23T14:14:36   running egg_info
2020-01-23T14:14:36   writing pomoxis.egg-info/PKG-INFO
2020-01-23T14:14:36   writing entry points to pomoxis.egg-info/entry_points.txt
2020-01-23T14:14:36   writing top-level names to pomoxis.egg-info/top_level.txt
2020-01-23T14:14:36   writing requirements to pomoxis.egg-info/requires.txt
2020-01-23T14:14:36   writing dependency_links to pomoxis.egg-info/dependency_links.txt
2020-01-23T14:14:36   reading manifest file 'pomoxis.egg-info/SOURCES.txt'
2020-01-23T14:14:36   reading manifest template 'MANIFEST.in'
2020-01-23T14:14:36   no previously-included directories found matching 'build'
2020-01-23T14:14:36   no previously-included directories found matching 'docs'
2020-01-23T14:14:37   writing manifest file 'pomoxis.egg-info/SOURCES.txt'
2020-01-23T14:14:37   Copying pomoxis.egg-info to build/bdist.linux-armv7l/wheel/pomoxis-0.3.1-py3.5.egg-info
2020-01-23T14:14:37   running install_scripts
2020-01-23T14:14:37   creating build/bdist.linux-armv7l/wheel/pomoxis-0.3.1.data
2020-01-23T14:14:37   creating build/bdist.linux-armv7l/wheel/pomoxis-0.3.1.data/scripts
2020-01-23T14:14:37   copying build/scripts-3.5/mini_assemble -> build/bdist.linux-armv7l/wheel/pomoxis-0.3.1.data/scripts
2020-01-23T14:14:37   copying build/scripts-3.5/assess_assembly -> build/bdist.linux-armv7l/wheel/pomoxis-0.3.1.data/scripts
2020-01-23T14:14:37   copying build/scripts-3.5/intersect_assembly_errors -> build/bdist.linux-armv7l/wheel/pomoxis-0.3.1.data/scripts
2020-01-23T14:14:37   copying build/scripts-3.5/mini_align -> build/bdist.linux-armv7l/wheel/pomoxis-0.3.1.data/scripts
2020-01-23T14:14:37   changing mode of build/bdist.linux-armv7l/wheel/pomoxis-0.3.1.data/scripts/mini_assemble to 755
2020-01-23T14:14:37   changing mode of build/bdist.linux-armv7l/wheel/pomoxis-0.3.1.data/scripts/assess_assembly to 755
2020-01-23T14:14:37   changing mode of build/bdist.linux-armv7l/wheel/pomoxis-0.3.1.data/scripts/intersect_assembly_errors to 755
2020-01-23T14:14:37   changing mode of build/bdist.linux-armv7l/wheel/pomoxis-0.3.1.data/scripts/mini_align to 755
2020-01-23T14:14:37   creating build/bdist.linux-armv7l/wheel/pomoxis-0.3.1.dist-info/WHEEL
2020-01-23T14:14:37   Building wheel for pomoxis (setup.py): finished with status 'done'
2020-01-23T14:14:37   Stored in directory: /tmp/tmpqvjonlyv
2020-01-23T14:14:37 Successfully built pomoxis
2020-01-23T14:14:37 Cleaning up...
2020-01-23T14:14:37   Removing source in /tmp/pip-wheel-hzid0iuy/pomoxis
2020-01-23T14:14:37 Removed build tracker '/tmp/pip-req-tracker-epe8_tnm'