2020-02-12T18:53:53 Created temporary directory: /tmp/pip-ephem-wheel-cache-4o993usi
2020-02-12T18:53:53 Created temporary directory: /tmp/pip-req-tracker-6e929jso
2020-02-12T18:53:53 Created requirements tracker '/tmp/pip-req-tracker-6e929jso'
2020-02-12T18:53:53 Created temporary directory: /tmp/pip-wheel-lh578rey
2020-02-12T18:53:53 Collecting hivclustering==1.5.3
2020-02-12T18:53:53   1 location(s) to search for versions of hivclustering:
2020-02-12T18:53:53   * https://pypi.org/simple/hivclustering/
2020-02-12T18:53:53   Getting page https://pypi.org/simple/hivclustering/
2020-02-12T18:53:53   Analyzing links from page https://pypi.org/simple/hivclustering/
2020-02-12T18:53:54     Found link https://files.pythonhosted.org/packages/be/63/218c39b9ad0311be7a12702cf853f2d0305e6fd4458d58d3ee0a3bf429a6/hivclustering-1.2.5.tar.gz#sha256=feacc7340cd0fc3f08ce7e65472dc0f382a140aaf262a1eca7acac585e69d8dc (from https://pypi.org/simple/hivclustering/), version: 1.2.5
2020-02-12T18:53:54     Found link https://files.pythonhosted.org/packages/67/d6/ccf018b983946e9edbcb38bdac99dad65e3199623505563a793e3d7993ca/hivclustering-1.2.6.tar.gz#sha256=afd7d39edda2c52acb8d5ffb8e90341b1e102a5ea82690cd2211aea0ce723df2 (from https://pypi.org/simple/hivclustering/), version: 1.2.6
2020-02-12T18:53:54     Found link https://files.pythonhosted.org/packages/94/78/880ea9da2705624a346e8f823b6cab8fc264b8505336d5d19280af23e619/hivclustering-1.2.7.tar.gz#sha256=9d28b8c499a225abb38692e6bfef4aaaeb165bcbc9c4b43ff259b75ffffe909e (from https://pypi.org/simple/hivclustering/), version: 1.2.7
2020-02-12T18:53:54     Found link https://files.pythonhosted.org/packages/50/01/828d4bfa522848698970e08f4277024c18852b86dbdfc5191bb271d756af/hivclustering-1.2.8.tar.gz#sha256=6d3563e0b295cb80bf077738661624bba8352ccb53eb377d0415e836a32a2d17 (from https://pypi.org/simple/hivclustering/), version: 1.2.8
2020-02-12T18:53:54     Found link https://files.pythonhosted.org/packages/b8/f3/4eb8073b7f1343311edb38046396c39debb8553bbbcabf3866cfe9057c4e/hivclustering-1.3.0.tar.gz#sha256=71bdb924d780027790c50ca99270bae788f1329fd9c4b2d61c5168e6e7e4477a (from https://pypi.org/simple/hivclustering/), version: 1.3.0
2020-02-12T18:53:54     Found link https://files.pythonhosted.org/packages/48/82/f9031dd1c00db81a9165533a52508e28190a9a48b88103f7d61b18f3ed6d/hivclustering-1.3.1.tar.gz#sha256=46b473c0a4b382a44828e0e562b13d3807f361334d385e703a7666649937dd03 (from https://pypi.org/simple/hivclustering/), version: 1.3.1
2020-02-12T18:53:54     Found link https://files.pythonhosted.org/packages/eb/5c/56e25f045d57d87737de12af90eb9d31d6e0ddb490c614fcf719a5a51de8/hivclustering-1.3.2.tar.gz#sha256=197be4814a06cb1db8f7b7c745d52c7e34458e28831df0cd26faba89fea526a0 (from https://pypi.org/simple/hivclustering/), version: 1.3.2
2020-02-12T18:53:54     Found link https://files.pythonhosted.org/packages/ad/1b/ddc494adedcd724936919219d78d243f45a07afd806a91f64e6b6b83a411/hivclustering-1.4.1.macosx-10.13-x86_64.tar.gz#sha256=c015538c9ce423bc28e98c015b91c81716ab4c8f78a513e4e4bb7cb65ad89d17 (from https://pypi.org/simple/hivclustering/), version: 1.4.1.macosx-10.13-x86_64
2020-02-12T18:53:54     Found link https://files.pythonhosted.org/packages/c8/ad/30f905579ed48a1df529c7deb1d9da7fb2967fc995b3a7a6aab4395244e7/hivclustering-1.4.2.tar.gz#sha256=6914747ae4e499e2174122505c827e650bdc0d8fb2b9c734c9e93e84eb1650db (from https://pypi.org/simple/hivclustering/), version: 1.4.2
2020-02-12T18:53:54     Found link https://files.pythonhosted.org/packages/52/bb/41b5d5516072ed73d68dc15c00412d9573eaf91e23d67bd98ae78d900d34/hivclustering-1.5.1.tar.gz#sha256=6f5db8a7e0f370dcf2d5bbd89f2cbaba3d0671e77a8695ad157b58f6ef7ae4de (from https://pypi.org/simple/hivclustering/), version: 1.5.1
2020-02-12T18:53:54     Found link https://files.pythonhosted.org/packages/a0/c2/8b3aec81b0f81a22d9185cfa5d37d55934cc40606b06925c3ee9c3f491af/hivclustering-1.5.2.tar.gz#sha256=743ba79f715e092bfef582d8b695f822e316ddd44a02b4b0b8574baa39b11c89 (from https://pypi.org/simple/hivclustering/), version: 1.5.2
2020-02-12T18:53:54     Found link https://files.pythonhosted.org/packages/63/17/4605c1c87e3723a00e8eb42f7d4447f7caf435d42157098ff6c01bdd2e37/hivclustering-1.5.3.tar.gz#sha256=6b9520edc1a25532e384be7b9f1eb26b502dd17f7de6481e7c917d8d63b1d804 (from https://pypi.org/simple/hivclustering/), version: 1.5.3
2020-02-12T18:53:54   Using version 1.5.3 (newest of versions: 1.5.3)
2020-02-12T18:53:54   Created temporary directory: /tmp/pip-unpack-rhmb1zdq
2020-02-12T18:53:54   Downloading https://files.pythonhosted.org/packages/63/17/4605c1c87e3723a00e8eb42f7d4447f7caf435d42157098ff6c01bdd2e37/hivclustering-1.5.3.tar.gz (56kB)
2020-02-12T18:53:54   Downloading from URL https://files.pythonhosted.org/packages/63/17/4605c1c87e3723a00e8eb42f7d4447f7caf435d42157098ff6c01bdd2e37/hivclustering-1.5.3.tar.gz#sha256=6b9520edc1a25532e384be7b9f1eb26b502dd17f7de6481e7c917d8d63b1d804 (from https://pypi.org/simple/hivclustering/)
2020-02-12T18:53:54   Added hivclustering==1.5.3 from https://files.pythonhosted.org/packages/63/17/4605c1c87e3723a00e8eb42f7d4447f7caf435d42157098ff6c01bdd2e37/hivclustering-1.5.3.tar.gz#sha256=6b9520edc1a25532e384be7b9f1eb26b502dd17f7de6481e7c917d8d63b1d804 to build tracker '/tmp/pip-req-tracker-6e929jso'
2020-02-12T18:53:54     Running setup.py (path:/tmp/pip-wheel-lh578rey/hivclustering/setup.py) egg_info for package hivclustering
2020-02-12T18:53:54     Running command python setup.py egg_info
2020-02-12T18:53:56     running egg_info
2020-02-12T18:53:56     creating pip-egg-info/hivclustering.egg-info
2020-02-12T18:53:56     writing dependency_links to pip-egg-info/hivclustering.egg-info/dependency_links.txt
2020-02-12T18:53:56     writing pip-egg-info/hivclustering.egg-info/PKG-INFO
2020-02-12T18:53:56     writing top-level names to pip-egg-info/hivclustering.egg-info/top_level.txt
2020-02-12T18:53:56     writing requirements to pip-egg-info/hivclustering.egg-info/requires.txt
2020-02-12T18:53:56     writing manifest file 'pip-egg-info/hivclustering.egg-info/SOURCES.txt'
2020-02-12T18:53:57     reading manifest file 'pip-egg-info/hivclustering.egg-info/SOURCES.txt'
2020-02-12T18:53:57     writing manifest file 'pip-egg-info/hivclustering.egg-info/SOURCES.txt'
2020-02-12T18:53:57   Source in /tmp/pip-wheel-lh578rey/hivclustering has version 1.5.3, which satisfies requirement hivclustering==1.5.3 from https://files.pythonhosted.org/packages/63/17/4605c1c87e3723a00e8eb42f7d4447f7caf435d42157098ff6c01bdd2e37/hivclustering-1.5.3.tar.gz#sha256=6b9520edc1a25532e384be7b9f1eb26b502dd17f7de6481e7c917d8d63b1d804
2020-02-12T18:53:57   Removed hivclustering==1.5.3 from https://files.pythonhosted.org/packages/63/17/4605c1c87e3723a00e8eb42f7d4447f7caf435d42157098ff6c01bdd2e37/hivclustering-1.5.3.tar.gz#sha256=6b9520edc1a25532e384be7b9f1eb26b502dd17f7de6481e7c917d8d63b1d804 from build tracker '/tmp/pip-req-tracker-6e929jso'
2020-02-12T18:53:57 Building wheels for collected packages: hivclustering
2020-02-12T18:53:57   Created temporary directory: /tmp/pip-wheel-rmrbv397
2020-02-12T18:53:57   Building wheel for hivclustering (setup.py): started
2020-02-12T18:53:57   Destination directory: /tmp/pip-wheel-rmrbv397
2020-02-12T18:53:57   Running command /usr/bin/python3 -u -c 'import setuptools, tokenize;__file__='"'"'/tmp/pip-wheel-lh578rey/hivclustering/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-rmrbv397
2020-02-12T18:53:59   running bdist_wheel
2020-02-12T18:53:59   running build
2020-02-12T18:53:59   running build_py
2020-02-12T18:53:59   creating build
2020-02-12T18:53:59   creating build/lib
2020-02-12T18:53:59   creating build/lib/hivclustering
2020-02-12T18:53:59   copying hivclustering/networkbuild.py -> build/lib/hivclustering
2020-02-12T18:53:59   copying hivclustering/mtnetwork.py -> build/lib/hivclustering
2020-02-12T18:53:59   copying hivclustering/__init__.py -> build/lib/hivclustering
2020-02-12T18:53:59   creating build/lib/hivclustering/data
2020-02-12T18:53:59   creating build/lib/hivclustering/data/HBL
2020-02-12T18:53:59   copying hivclustering/data/HBL/DegreeDistributions.bf -> build/lib/hivclustering/data/HBL
2020-02-12T18:53:59   copying hivclustering/data/HBL/ExtractACluster.bf -> build/lib/hivclustering/data/HBL
2020-02-12T18:53:59   copying hivclustering/data/HBL/TriangleSupport.bf -> build/lib/hivclustering/data/HBL
2020-02-12T18:53:59   copying hivclustering/data/HBL/ExtractSequences.bf -> build/lib/hivclustering/data/HBL
2020-02-12T18:53:59   copying hivclustering/data/HBL/SimulateSequence.bf -> build/lib/hivclustering/data/HBL
2020-02-12T18:53:59   copying hivclustering/data/HBL/CycleSupport.bf -> build/lib/hivclustering/data/HBL
2020-02-12T18:53:59   running build_scripts
2020-02-12T18:53:59   creating build/scripts-3.5
2020-02-12T18:53:59   copying and adjusting scripts/hivnetworkcsv -> build/scripts-3.5
2020-02-12T18:53:59   copying and adjusting scripts/TNS -> build/scripts-3.5
2020-02-12T18:53:59   copying and adjusting scripts/hivnetworkannotate -> build/scripts-3.5
2020-02-12T18:53:59   changing mode of build/scripts-3.5/hivnetworkcsv from 644 to 755
2020-02-12T18:53:59   changing mode of build/scripts-3.5/TNS from 644 to 755
2020-02-12T18:53:59   changing mode of build/scripts-3.5/hivnetworkannotate from 644 to 755
2020-02-12T18:53:59   installing to build/bdist.linux-armv7l/wheel
2020-02-12T18:53:59   running install
2020-02-12T18:53:59   running install_lib
2020-02-12T18:53:59   creating build/bdist.linux-armv7l
2020-02-12T18:53:59   creating build/bdist.linux-armv7l/wheel
2020-02-12T18:53:59   creating build/bdist.linux-armv7l/wheel/hivclustering
2020-02-12T18:53:59   copying build/lib/hivclustering/networkbuild.py -> build/bdist.linux-armv7l/wheel/hivclustering
2020-02-12T18:53:59   copying build/lib/hivclustering/mtnetwork.py -> build/bdist.linux-armv7l/wheel/hivclustering
2020-02-12T18:53:59   creating build/bdist.linux-armv7l/wheel/hivclustering/data
2020-02-12T18:53:59   creating build/bdist.linux-armv7l/wheel/hivclustering/data/HBL
2020-02-12T18:53:59   copying build/lib/hivclustering/data/HBL/DegreeDistributions.bf -> build/bdist.linux-armv7l/wheel/hivclustering/data/HBL
2020-02-12T18:53:59   copying build/lib/hivclustering/data/HBL/ExtractACluster.bf -> build/bdist.linux-armv7l/wheel/hivclustering/data/HBL
2020-02-12T18:53:59   copying build/lib/hivclustering/data/HBL/TriangleSupport.bf -> build/bdist.linux-armv7l/wheel/hivclustering/data/HBL
2020-02-12T18:53:59   copying build/lib/hivclustering/data/HBL/ExtractSequences.bf -> build/bdist.linux-armv7l/wheel/hivclustering/data/HBL
2020-02-12T18:53:59   copying build/lib/hivclustering/data/HBL/SimulateSequence.bf -> build/bdist.linux-armv7l/wheel/hivclustering/data/HBL
2020-02-12T18:53:59   copying build/lib/hivclustering/data/HBL/CycleSupport.bf -> build/bdist.linux-armv7l/wheel/hivclustering/data/HBL
2020-02-12T18:53:59   copying build/lib/hivclustering/__init__.py -> build/bdist.linux-armv7l/wheel/hivclustering
2020-02-12T18:53:59   running install_egg_info
2020-02-12T18:53:59   running egg_info
2020-02-12T18:53:59   writing hivclustering.egg-info/PKG-INFO
2020-02-12T18:53:59   writing dependency_links to hivclustering.egg-info/dependency_links.txt
2020-02-12T18:53:59   writing requirements to hivclustering.egg-info/requires.txt
2020-02-12T18:53:59   writing top-level names to hivclustering.egg-info/top_level.txt
2020-02-12T18:53:59   reading manifest file 'hivclustering.egg-info/SOURCES.txt'
2020-02-12T18:53:59   writing manifest file 'hivclustering.egg-info/SOURCES.txt'
2020-02-12T18:53:59   Copying hivclustering.egg-info to build/bdist.linux-armv7l/wheel/hivclustering-1.5.3-py3.5.egg-info
2020-02-12T18:53:59   running install_scripts
2020-02-12T18:53:59   creating build/bdist.linux-armv7l/wheel/hivclustering-1.5.3.data
2020-02-12T18:53:59   creating build/bdist.linux-armv7l/wheel/hivclustering-1.5.3.data/scripts
2020-02-12T18:53:59   copying build/scripts-3.5/hivnetworkcsv -> build/bdist.linux-armv7l/wheel/hivclustering-1.5.3.data/scripts
2020-02-12T18:53:59   copying build/scripts-3.5/hivnetworkannotate -> build/bdist.linux-armv7l/wheel/hivclustering-1.5.3.data/scripts
2020-02-12T18:53:59   copying build/scripts-3.5/TNS -> build/bdist.linux-armv7l/wheel/hivclustering-1.5.3.data/scripts
2020-02-12T18:54:00   changing mode of build/bdist.linux-armv7l/wheel/hivclustering-1.5.3.data/scripts/hivnetworkcsv to 755
2020-02-12T18:54:00   changing mode of build/bdist.linux-armv7l/wheel/hivclustering-1.5.3.data/scripts/hivnetworkannotate to 755
2020-02-12T18:54:00   changing mode of build/bdist.linux-armv7l/wheel/hivclustering-1.5.3.data/scripts/TNS to 755
2020-02-12T18:54:00   creating build/bdist.linux-armv7l/wheel/hivclustering-1.5.3.dist-info/WHEEL
2020-02-12T18:54:00   Building wheel for hivclustering (setup.py): finished with status 'done'
2020-02-12T18:54:00   Stored in directory: /tmp/tmp8rb32nsa
2020-02-12T18:54:00 Successfully built hivclustering
2020-02-12T18:54:00 Cleaning up...
2020-02-12T18:54:00   Removing source in /tmp/pip-wheel-lh578rey/hivclustering
2020-02-12T18:54:00 Removed build tracker '/tmp/pip-req-tracker-6e929jso'