2020-03-06T18:07:33 Created temporary directory: /tmp/pip-ephem-wheel-cache-ilaw_d6e
2020-03-06T18:07:33 Created temporary directory: /tmp/pip-req-tracker-1s5066f9
2020-03-06T18:07:33 Created requirements tracker '/tmp/pip-req-tracker-1s5066f9'
2020-03-06T18:07:33 Created temporary directory: /tmp/pip-wheel-lt2x996v
2020-03-06T18:07:33 Collecting pele-platform==1.3.3
2020-03-06T18:07:33   1 location(s) to search for versions of pele-platform:
2020-03-06T18:07:33   * https://pypi.org/simple/pele-platform/
2020-03-06T18:07:33   Getting page https://pypi.org/simple/pele-platform/
2020-03-06T18:07:33   Analyzing links from page https://pypi.org/simple/pele-platform/
2020-03-06T18:07:33     Found link https://files.pythonhosted.org/packages/f0/ac/9497572d7da4e501c8dddc3be3fa338744dbc27b67eb09275b8375fae2fd/pele_platform-1.0.0.1.tar.gz#sha256=e3c8bde654fe3d249714c4ddb1d3471944752f6840a6bcf4b399a3466931b838 (from https://pypi.org/simple/pele-platform/), version: 1.0.0.1
2020-03-06T18:07:33     Found link https://files.pythonhosted.org/packages/79/a0/d1b4b9269c3fe9dd2edc878a2dec9d3f4e7701cc932272169f44a025c2a9/pele_platform-1.0.0.2.tar.gz#sha256=919f487c943e6e71a8d82e56dac3051605ffdc6a680d168b5233cea95c9e4701 (from https://pypi.org/simple/pele-platform/), version: 1.0.0.2
2020-03-06T18:07:33     Found link https://files.pythonhosted.org/packages/a3/56/3cc9eb3b0ecf0943c4f4eb5b0729cd54906290f84dc4cfb230ad69ce99c6/pele_platform-1.0.0.3.tar.gz#sha256=ea4f3df0aeb65812e72eb9b24605146a7afeeb7f89ce7f769058c2e894654239 (from https://pypi.org/simple/pele-platform/), version: 1.0.0.3
2020-03-06T18:07:33     Found link https://files.pythonhosted.org/packages/d0/6d/1ac79163749b10c7f694dde1db24063d4e2f57bcf365db1b8cfa1b9f7f57/pele_platform-1.1.0.tar.gz#sha256=25a644fc27c0c364bfece9addd278a74a5a7ea5f4ab40b31fa8cd961e7485a65 (from https://pypi.org/simple/pele-platform/), version: 1.1.0
2020-03-06T18:07:33     Found link https://files.pythonhosted.org/packages/fd/15/306ea35b1d4be507caf1613d05fc16c076f070c2a16e6283a331695fcb5e/pele_platform-1.2.0.tar.gz#sha256=2967a976bafc47884ca49864ca87d40d87aa50c2fc57900c1f0517e84e789153 (from https://pypi.org/simple/pele-platform/), version: 1.2.0
2020-03-06T18:07:33     Found link https://files.pythonhosted.org/packages/74/98/cf2442f668f8ad6be1838c3ce7b87a409eee7448a1d7d033862ad0bda36c/pele_platform-1.2.1.tar.gz#sha256=5d30d563960934362ac79eb7a24b8f4b831076dba29bbb498901a0b0a1dca367 (from https://pypi.org/simple/pele-platform/), version: 1.2.1
2020-03-06T18:07:33     Found link https://files.pythonhosted.org/packages/1a/78/29b2eb73308b595668a9c22abd93ac88f82c49ebc6b004f332a774166391/pele_platform-1.2.2.tar.gz#sha256=00f579740db5455cea04c82e86b87c8f53045496ba61d9f4e96436f1d0cdfb08 (from https://pypi.org/simple/pele-platform/), version: 1.2.2
2020-03-06T18:07:33     Found link https://files.pythonhosted.org/packages/fb/6b/85f262d33a080377ea5202d5779c9402c23aaefc4e1b04bb94d9432aad42/pele_platform-1.2.3.tar.gz#sha256=18713b6811d7689accb54dde5429aa5225dcb8e520164fd7b4037453c63f74d9 (from https://pypi.org/simple/pele-platform/), version: 1.2.3
2020-03-06T18:07:33     Found link https://files.pythonhosted.org/packages/d5/15/707e6b89f0ee479d173ef2fe6a41af1ff9d91dd86e45067da5cee56761d9/pele_platform-1.3.0.tar.gz#sha256=fb7fb5dd59f9e3a76d371be6aa0b013209752c464862bf944de6b2a2903424a9 (from https://pypi.org/simple/pele-platform/), version: 1.3.0
2020-03-06T18:07:33     Found link https://files.pythonhosted.org/packages/7c/b0/4fda3001d5f13010bc2005e335f799f24d2204fc700a847e28091b57fabb/pele_platform-1.3.1.tar.gz#sha256=c6c0ac764ae30ce8a0650cdf0fc686fd733cb6b11fc15e6cccd5659166be3b33 (from https://pypi.org/simple/pele-platform/), version: 1.3.1
2020-03-06T18:07:33     Found link https://files.pythonhosted.org/packages/34/21/2f68d91d200432e0feb4662f6ba5538817335d86df60688e3a6f050dd21b/pele_platform-1.3.2.tar.gz#sha256=14c6e236347a1101f5de04bc25a32f302904bdb46326fb151c14e930a28d7a48 (from https://pypi.org/simple/pele-platform/), version: 1.3.2
2020-03-06T18:07:33     Found link https://files.pythonhosted.org/packages/63/a6/ad0bc781b4089093fd8aca4d75d237e0c0ae9d1f6b7e4b86a733f5a91b10/pele_platform-1.3.3.tar.gz#sha256=9e9e49d359bde42485b1c2d23b8a80c3de43064a672c260d18b9f10b55ee666e (from https://pypi.org/simple/pele-platform/), version: 1.3.3
2020-03-06T18:07:33   Using version 1.3.3 (newest of versions: 1.3.3)
2020-03-06T18:07:33   Created temporary directory: /tmp/pip-unpack-_eu2114m
2020-03-06T18:07:34   Downloading https://files.pythonhosted.org/packages/63/a6/ad0bc781b4089093fd8aca4d75d237e0c0ae9d1f6b7e4b86a733f5a91b10/pele_platform-1.3.3.tar.gz (1.5MB)
2020-03-06T18:07:34   Downloading from URL https://files.pythonhosted.org/packages/63/a6/ad0bc781b4089093fd8aca4d75d237e0c0ae9d1f6b7e4b86a733f5a91b10/pele_platform-1.3.3.tar.gz#sha256=9e9e49d359bde42485b1c2d23b8a80c3de43064a672c260d18b9f10b55ee666e (from https://pypi.org/simple/pele-platform/)
2020-03-06T18:07:36   Added pele-platform==1.3.3 from https://files.pythonhosted.org/packages/63/a6/ad0bc781b4089093fd8aca4d75d237e0c0ae9d1f6b7e4b86a733f5a91b10/pele_platform-1.3.3.tar.gz#sha256=9e9e49d359bde42485b1c2d23b8a80c3de43064a672c260d18b9f10b55ee666e to build tracker '/tmp/pip-req-tracker-1s5066f9'
2020-03-06T18:07:36     Running setup.py (path:/tmp/pip-wheel-lt2x996v/pele-platform/setup.py) egg_info for package pele-platform
2020-03-06T18:07:36     Running command python setup.py egg_info
2020-03-06T18:07:38     running egg_info
2020-03-06T18:07:38     creating pip-egg-info/pele_platform.egg-info
2020-03-06T18:07:38     writing requirements to pip-egg-info/pele_platform.egg-info/requires.txt
2020-03-06T18:07:38     writing pip-egg-info/pele_platform.egg-info/PKG-INFO
2020-03-06T18:07:38     writing top-level names to pip-egg-info/pele_platform.egg-info/top_level.txt
2020-03-06T18:07:38     writing dependency_links to pip-egg-info/pele_platform.egg-info/dependency_links.txt
2020-03-06T18:07:38     writing manifest file 'pip-egg-info/pele_platform.egg-info/SOURCES.txt'
2020-03-06T18:07:39     reading manifest file 'pip-egg-info/pele_platform.egg-info/SOURCES.txt'
2020-03-06T18:07:39     reading manifest template 'MANIFEST.in'
2020-03-06T18:07:39     warning: no files found matching 'pele_platform/AdaptivePELE/atomset/*'
2020-03-06T18:07:39     warning: no files found matching 'pele_platform/AdaptivePELE/freeEnergies/*'
2020-03-06T18:07:39     warning: no files found matching '*' under directory 'pele_platform/Utilities/PPP/Data/'
2020-03-06T18:07:39     writing manifest file 'pip-egg-info/pele_platform.egg-info/SOURCES.txt'
2020-03-06T18:07:39   Source in /tmp/pip-wheel-lt2x996v/pele-platform has version 1.3.3, which satisfies requirement pele-platform==1.3.3 from https://files.pythonhosted.org/packages/63/a6/ad0bc781b4089093fd8aca4d75d237e0c0ae9d1f6b7e4b86a733f5a91b10/pele_platform-1.3.3.tar.gz#sha256=9e9e49d359bde42485b1c2d23b8a80c3de43064a672c260d18b9f10b55ee666e
2020-03-06T18:07:39   Removed pele-platform==1.3.3 from https://files.pythonhosted.org/packages/63/a6/ad0bc781b4089093fd8aca4d75d237e0c0ae9d1f6b7e4b86a733f5a91b10/pele_platform-1.3.3.tar.gz#sha256=9e9e49d359bde42485b1c2d23b8a80c3de43064a672c260d18b9f10b55ee666e from build tracker '/tmp/pip-req-tracker-1s5066f9'
2020-03-06T18:07:39 Building wheels for collected packages: pele-platform
2020-03-06T18:07:39   Created temporary directory: /tmp/pip-wheel-ibqc4kgo
2020-03-06T18:07:39   Building wheel for pele-platform (setup.py): started
2020-03-06T18:07:39   Destination directory: /tmp/pip-wheel-ibqc4kgo
2020-03-06T18:07:39   Running command /usr/bin/python3 -u -c 'import setuptools, tokenize;__file__='"'"'/tmp/pip-wheel-lt2x996v/pele-platform/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-ibqc4kgo
2020-03-06T18:07:41   running bdist_wheel
2020-03-06T18:07:41   running build
2020-03-06T18:07:41   running build_py
2020-03-06T18:07:41   creating build
2020-03-06T18:07:41   creating build/lib
2020-03-06T18:07:41   creating build/lib/pele_platform
2020-03-06T18:07:41   copying pele_platform/features.py -> build/lib/pele_platform
2020-03-06T18:07:41   copying pele_platform/__init__.py -> build/lib/pele_platform
2020-03-06T18:07:41   copying pele_platform/main.py -> build/lib/pele_platform
2020-03-06T18:07:41   creating build/lib/pele_platform/constants
2020-03-06T18:07:41   copying pele_platform/constants/constants.py -> build/lib/pele_platform/constants
2020-03-06T18:07:41   copying pele_platform/constants/__init__.py -> build/lib/pele_platform/constants
2020-03-06T18:07:41   copying pele_platform/constants/pele_params.py -> build/lib/pele_platform/constants
2020-03-06T18:07:41   creating build/lib/pele_platform/Analysis
2020-03-06T18:07:41   copying pele_platform/Analysis/pdf_report.py -> build/lib/pele_platform/Analysis
2020-03-06T18:07:41   copying pele_platform/Analysis/__init__.py -> build/lib/pele_platform/Analysis
2020-03-06T18:07:41   copying pele_platform/Analysis/plots.py -> build/lib/pele_platform/Analysis
2020-03-06T18:07:41   copying pele_platform/Analysis/to_mae.py -> build/lib/pele_platform/Analysis
2020-03-06T18:07:41   creating build/lib/pele_platform/Utilities
2020-03-06T18:07:41   copying pele_platform/Utilities/__init__.py -> build/lib/pele_platform/Utilities
2020-03-06T18:07:41   creating build/lib/pele_platform/Adaptive
2020-03-06T18:07:41   copying pele_platform/Adaptive/simulation.py -> build/lib/pele_platform/Adaptive
2020-03-06T18:07:41   copying pele_platform/Adaptive/__init__.py -> build/lib/pele_platform/Adaptive
2020-03-06T18:07:41   copying pele_platform/Adaptive/main.py -> build/lib/pele_platform/Adaptive
2020-03-06T18:07:41   creating build/lib/pele_platform/Utilities/Parameters
2020-03-06T18:07:41   copying pele_platform/Utilities/Parameters/pele_env.py -> build/lib/pele_platform/Utilities/Parameters
2020-03-06T18:07:42   copying pele_platform/Utilities/Parameters/__init__.py -> build/lib/pele_platform/Utilities/Parameters
2020-03-06T18:07:42   creating build/lib/pele_platform/Utilities/Helpers
2020-03-06T18:07:42   copying pele_platform/Utilities/Helpers/metrics.py -> build/lib/pele_platform/Utilities/Helpers
2020-03-06T18:07:42   copying pele_platform/Utilities/Helpers/prepwizard.py -> build/lib/pele_platform/Utilities/Helpers
2020-03-06T18:07:42   copying pele_platform/Utilities/Helpers/check_env_var.py -> build/lib/pele_platform/Utilities/Helpers
2020-03-06T18:07:42   copying pele_platform/Utilities/Helpers/split_trajectories.py -> build/lib/pele_platform/Utilities/Helpers
2020-03-06T18:07:42   copying pele_platform/Utilities/Helpers/best_structs.py -> build/lib/pele_platform/Utilities/Helpers
2020-03-06T18:07:42   copying pele_platform/Utilities/Helpers/tica.py -> build/lib/pele_platform/Utilities/Helpers
2020-03-06T18:07:42   copying pele_platform/Utilities/Helpers/template_builder.py -> build/lib/pele_platform/Utilities/Helpers
2020-03-06T18:07:42   copying pele_platform/Utilities/Helpers/simulation.py -> build/lib/pele_platform/Utilities/Helpers
2020-03-06T18:07:42   copying pele_platform/Utilities/Helpers/system_prep.py -> build/lib/pele_platform/Utilities/Helpers
2020-03-06T18:07:42   copying pele_platform/Utilities/Helpers/missing_residues.py -> build/lib/pele_platform/Utilities/Helpers
2020-03-06T18:07:42   copying pele_platform/Utilities/Helpers/calculatePCA4PELE.py -> build/lib/pele_platform/Utilities/Helpers
2020-03-06T18:07:42   copying pele_platform/Utilities/Helpers/__init__.py -> build/lib/pele_platform/Utilities/Helpers
2020-03-06T18:07:42   copying pele_platform/Utilities/Helpers/conda_deployment.py -> build/lib/pele_platform/Utilities/Helpers
2020-03-06T18:07:42   copying pele_platform/Utilities/Helpers/constraints.py -> build/lib/pele_platform/Utilities/Helpers
2020-03-06T18:07:42   copying pele_platform/Utilities/Helpers/randomize.py -> build/lib/pele_platform/Utilities/Helpers
2020-03-06T18:07:42   copying pele_platform/Utilities/Helpers/helpers.py -> build/lib/pele_platform/Utilities/Helpers
2020-03-06T18:07:42   copying pele_platform/Utilities/Helpers/solventOBCParamsGenerator.py -> build/lib/pele_platform/Utilities/Helpers
2020-03-06T18:07:42   copying pele_platform/Utilities/Helpers/center_of_mass.py -> build/lib/pele_platform/Utilities/Helpers
2020-03-06T18:07:42   copying pele_platform/Utilities/Helpers/external_files.py -> build/lib/pele_platform/Utilities/Helpers
2020-03-06T18:07:42   creating build/lib/pele_platform/Utilities/PlopRotTemp
2020-03-06T18:07:42   copying pele_platform/Utilities/PlopRotTemp/PlopRotTemp.py -> build/lib/pele_platform/Utilities/PlopRotTemp
2020-03-06T18:07:42   copying pele_platform/Utilities/PlopRotTemp/__init__.py -> build/lib/pele_platform/Utilities/PlopRotTemp
2020-03-06T18:07:42   copying pele_platform/Utilities/PlopRotTemp/main.py -> build/lib/pele_platform/Utilities/PlopRotTemp
2020-03-06T18:07:42   copying pele_platform/Utilities/PlopRotTemp/launcher.py -> build/lib/pele_platform/Utilities/PlopRotTemp
2020-03-06T18:07:42   creating build/lib/pele_platform/Utilities/Parameters/SimulationParams
2020-03-06T18:07:42   copying pele_platform/Utilities/Parameters/SimulationParams/simulation_params.py -> build/lib/pele_platform/Utilities/Parameters/SimulationParams
2020-03-06T18:07:42   copying pele_platform/Utilities/Parameters/SimulationParams/__init__.py -> build/lib/pele_platform/Utilities/Parameters/SimulationParams
2020-03-06T18:07:42   creating build/lib/pele_platform/Utilities/Parameters/SimulationFolders
2020-03-06T18:07:42   copying pele_platform/Utilities/Parameters/SimulationFolders/simulation_folders.py -> build/lib/pele_platform/Utilities/Parameters/SimulationFolders
2020-03-06T18:07:42   copying pele_platform/Utilities/Parameters/SimulationFolders/__init__.py -> build/lib/pele_platform/Utilities/Parameters/SimulationFolders
2020-03-06T18:07:42   creating build/lib/pele_platform/Utilities/Parameters/SimulationParams/GlideParams
2020-03-06T18:07:42   copying pele_platform/Utilities/Parameters/SimulationParams/GlideParams/glide_params.py -> build/lib/pele_platform/Utilities/Parameters/SimulationParams/GlideParams
2020-03-06T18:07:42   copying pele_platform/Utilities/Parameters/SimulationParams/GlideParams/__init__.py -> build/lib/pele_platform/Utilities/Parameters/SimulationParams/GlideParams
2020-03-06T18:07:42   creating build/lib/pele_platform/Utilities/Parameters/SimulationParams/BiasParams
2020-03-06T18:07:42   copying pele_platform/Utilities/Parameters/SimulationParams/BiasParams/bias_params.py -> build/lib/pele_platform/Utilities/Parameters/SimulationParams/BiasParams
2020-03-06T18:07:42   copying pele_platform/Utilities/Parameters/SimulationParams/BiasParams/__init__.py -> build/lib/pele_platform/Utilities/Parameters/SimulationParams/BiasParams
2020-03-06T18:07:42   creating build/lib/pele_platform/Utilities/Parameters/SimulationParams/MSMParams
2020-03-06T18:07:42   copying pele_platform/Utilities/Parameters/SimulationParams/MSMParams/__init__.py -> build/lib/pele_platform/Utilities/Parameters/SimulationParams/MSMParams
2020-03-06T18:07:42   copying pele_platform/Utilities/Parameters/SimulationParams/MSMParams/msm_params.py -> build/lib/pele_platform/Utilities/Parameters/SimulationParams/MSMParams
2020-03-06T18:07:42   creating build/lib/pele_platform/Utilities/Parameters/SimulationParams/PCA
2020-03-06T18:07:42   copying pele_platform/Utilities/Parameters/SimulationParams/PCA/pca.py -> build/lib/pele_platform/Utilities/Parameters/SimulationParams/PCA
2020-03-06T18:07:42   copying pele_platform/Utilities/Parameters/SimulationParams/PCA/__init__.py -> build/lib/pele_platform/Utilities/Parameters/SimulationParams/PCA
2020-03-06T18:07:42   creating build/lib/pele_platform/Utilities/Parameters/SimulationParams/InOutParams
2020-03-06T18:07:42   copying pele_platform/Utilities/Parameters/SimulationParams/InOutParams/__init__.py -> build/lib/pele_platform/Utilities/Parameters/SimulationParams/InOutParams
2020-03-06T18:07:42   copying pele_platform/Utilities/Parameters/SimulationParams/InOutParams/inout_params.py -> build/lib/pele_platform/Utilities/Parameters/SimulationParams/InOutParams
2020-03-06T18:07:42   creating build/lib/pele_platform/Utilities/Parameters/SimulationParams/WaterExp
2020-03-06T18:07:42   copying pele_platform/Utilities/Parameters/SimulationParams/WaterExp/__init__.py -> build/lib/pele_platform/Utilities/Parameters/SimulationParams/WaterExp
2020-03-06T18:07:42   copying pele_platform/Utilities/Parameters/SimulationParams/WaterExp/waterexp_params.py -> build/lib/pele_platform/Utilities/Parameters/SimulationParams/WaterExp
2020-03-06T18:07:42   creating build/lib/pele_platform/Utilities/Parameters/SimulationFolders/GlideFolders
2020-03-06T18:07:42   copying pele_platform/Utilities/Parameters/SimulationFolders/GlideFolders/glide_folders.py -> build/lib/pele_platform/Utilities/Parameters/SimulationFolders/GlideFolders
2020-03-06T18:07:42   copying pele_platform/Utilities/Parameters/SimulationFolders/GlideFolders/__init__.py -> build/lib/pele_platform/Utilities/Parameters/SimulationFolders/GlideFolders
2020-03-06T18:07:42   creating build/lib/pele_platform/Utilities/Parameters/SimulationFolders/MSMFolders
2020-03-06T18:07:42   copying pele_platform/Utilities/Parameters/SimulationFolders/MSMFolders/msm_folders.py -> build/lib/pele_platform/Utilities/Parameters/SimulationFolders/MSMFolders
2020-03-06T18:07:42   copying pele_platform/Utilities/Parameters/SimulationFolders/MSMFolders/__init__.py -> build/lib/pele_platform/Utilities/Parameters/SimulationFolders/MSMFolders
2020-03-06T18:07:42   creating build/lib/pele_platform/Utilities/PlopRotTemp/template
2020-03-06T18:07:42   copying pele_platform/Utilities/PlopRotTemp/template/templateBuilder.py -> build/lib/pele_platform/Utilities/PlopRotTemp/template
2020-03-06T18:07:42   copying pele_platform/Utilities/PlopRotTemp/template/__init__.py -> build/lib/pele_platform/Utilities/PlopRotTemp/template
2020-03-06T18:07:42   copying pele_platform/Utilities/PlopRotTemp/template/tmp_helpers.py -> build/lib/pele_platform/Utilities/PlopRotTemp/template
2020-03-06T18:07:42   copying pele_platform/Utilities/PlopRotTemp/template/chargeHandler.py -> build/lib/pele_platform/Utilities/PlopRotTemp/template
2020-03-06T18:07:42   creating build/lib/pele_platform/Utilities/PlopRotTemp/Utilities
2020-03-06T18:07:42   copying pele_platform/Utilities/PlopRotTemp/Utilities/non_standard_res.py -> build/lib/pele_platform/Utilities/PlopRotTemp/Utilities
2020-03-06T18:07:42   copying pele_platform/Utilities/PlopRotTemp/Utilities/__init__.py -> build/lib/pele_platform/Utilities/PlopRotTemp/Utilities
2020-03-06T18:07:42   running egg_info
2020-03-06T18:07:42   writing dependency_links to pele_platform.egg-info/dependency_links.txt
2020-03-06T18:07:42   writing top-level names to pele_platform.egg-info/top_level.txt
2020-03-06T18:07:42   writing pele_platform.egg-info/PKG-INFO
2020-03-06T18:07:42   writing requirements to pele_platform.egg-info/requires.txt
2020-03-06T18:07:42   reading manifest file 'pele_platform.egg-info/SOURCES.txt'
2020-03-06T18:07:42   reading manifest template 'MANIFEST.in'
2020-03-06T18:07:42   warning: no files found matching 'pele_platform/AdaptivePELE/atomset/*'
2020-03-06T18:07:42   warning: no files found matching 'pele_platform/AdaptivePELE/freeEnergies/*'
2020-03-06T18:07:42   warning: no files found matching '*' under directory 'pele_platform/Utilities/PPP/Data/'
2020-03-06T18:07:42   writing manifest file 'pele_platform.egg-info/SOURCES.txt'
2020-03-06T18:07:42   creating build/lib/pele_platform/Examples
2020-03-06T18:07:42   copying pele_platform/Examples/test.sl -> build/lib/pele_platform/Examples
2020-03-06T18:07:42   creating build/lib/pele_platform/Examples/Adaptive
2020-03-06T18:07:42   copying pele_platform/Examples/Adaptive/STR.rot.assign -> build/lib/pele_platform/Examples/Adaptive
2020-03-06T18:07:42   copying pele_platform/Examples/Adaptive/adaptive.conf -> build/lib/pele_platform/Examples/Adaptive
2020-03-06T18:07:42   copying pele_platform/Examples/Adaptive/pele_file_4Adaptive.conf -> build/lib/pele_platform/Examples/Adaptive
2020-03-06T18:07:42   copying pele_platform/Examples/Adaptive/strz -> build/lib/pele_platform/Examples/Adaptive
2020-03-06T18:07:42   copying pele_platform/Examples/Adaptive/test.sl -> build/lib/pele_platform/Examples/Adaptive
2020-03-06T18:07:42   creating build/lib/pele_platform/Examples/Frag
2020-03-06T18:07:42   copying pele_platform/Examples/Frag/181l_prepared.pdb -> build/lib/pele_platform/Examples/Frag
2020-03-06T18:07:42   copying pele_platform/Examples/Frag/methyl.pdb -> build/lib/pele_platform/Examples/Frag
2020-03-06T18:07:42   creating build/lib/pele_platform/Examples/Msm
2020-03-06T18:07:42   copying pele_platform/Examples/Msm/AS4_INIT.mae -> build/lib/pele_platform/Examples/Msm
2020-03-06T18:07:42   copying pele_platform/Examples/Msm/PR_1A28_protein.pdb -> build/lib/pele_platform/Examples/Msm
2020-03-06T18:07:42   copying pele_platform/Examples/Msm/PR_1A28_xray_-_minimized.pdb -> build/lib/pele_platform/Examples/Msm
2020-03-06T18:07:42   copying pele_platform/Examples/Msm/PR_AS4.pdb -> build/lib/pele_platform/Examples/Msm
2020-03-06T18:07:42   copying pele_platform/Examples/Msm/input.yaml -> build/lib/pele_platform/Examples/Msm
2020-03-06T18:07:42   creating build/lib/pele_platform/Examples/analysis
2020-03-06T18:07:42   copying pele_platform/Examples/analysis/input.yaml -> build/lib/pele_platform/Examples/analysis
2020-03-06T18:07:42   creating build/lib/pele_platform/Examples/bias
2020-03-06T18:07:42   copying pele_platform/Examples/bias/complex.pdb -> build/lib/pele_platform/Examples/bias
2020-03-06T18:07:42   copying pele_platform/Examples/bias/input.yaml -> build/lib/pele_platform/Examples/bias
2020-03-06T18:07:42   copying pele_platform/Examples/bias/input_defaults.yaml -> build/lib/pele_platform/Examples/bias
2020-03-06T18:07:42   creating build/lib/pele_platform/Examples/exit
2020-03-06T18:07:42   copying pele_platform/Examples/exit/input.yaml -> build/lib/pele_platform/Examples/exit
2020-03-06T18:07:42   copying pele_platform/Examples/exit/input_defaults.yaml -> build/lib/pele_platform/Examples/exit
2020-03-06T18:07:42   creating build/lib/pele_platform/Examples/exit_soft
2020-03-06T18:07:42   copying pele_platform/Examples/exit_soft/input.yaml -> build/lib/pele_platform/Examples/exit_soft
2020-03-06T18:07:42   copying pele_platform/Examples/exit_soft/input_defaults.yaml -> build/lib/pele_platform/Examples/exit_soft
2020-03-06T18:07:42   creating build/lib/pele_platform/Examples/flags
2020-03-06T18:07:42   copying pele_platform/Examples/flags/input.yaml -> build/lib/pele_platform/Examples/flags
2020-03-06T18:07:42   creating build/lib/pele_platform/Examples/frag
2020-03-06T18:07:42   copying pele_platform/Examples/frag/core.pdb -> build/lib/pele_platform/Examples/frag
2020-03-06T18:07:42   copying pele_platform/Examples/frag/input_ai.yaml -> build/lib/pele_platform/Examples/frag
2020-03-06T18:07:42   creating build/lib/pele_platform/Examples/global
2020-03-06T18:07:42   copying pele_platform/Examples/global/input.yaml -> build/lib/pele_platform/Examples/global
2020-03-06T18:07:42   copying pele_platform/Examples/global/input_defaults.yaml -> build/lib/pele_platform/Examples/global
2020-03-06T18:07:42   creating build/lib/pele_platform/Examples/induced_fit
2020-03-06T18:07:43   copying pele_platform/Examples/induced_fit/input_exhaustive.yaml -> build/lib/pele_platform/Examples/induced_fit
2020-03-06T18:07:43   copying pele_platform/Examples/induced_fit/input_exhaustive_defaults.yaml -> build/lib/pele_platform/Examples/induced_fit
2020-03-06T18:07:43   copying pele_platform/Examples/induced_fit/input_external_constraints.yaml -> build/lib/pele_platform/Examples/induced_fit
2020-03-06T18:07:43   copying pele_platform/Examples/induced_fit/input_fast.yaml -> build/lib/pele_platform/Examples/induced_fit
2020-03-06T18:07:43   copying pele_platform/Examples/induced_fit/input_fast_defaults.yaml -> build/lib/pele_platform/Examples/induced_fit
2020-03-06T18:07:43   copying pele_platform/Examples/induced_fit/input_mae.yaml -> build/lib/pele_platform/Examples/induced_fit
2020-03-06T18:07:43   creating build/lib/pele_platform/Examples/inputs
2020-03-06T18:07:43   copying pele_platform/Examples/inputs/input.yaml -> build/lib/pele_platform/Examples/inputs
2020-03-06T18:07:43   copying pele_platform/Examples/inputs/mn4.sl -> build/lib/pele_platform/Examples/inputs
2020-03-06T18:07:43   copying pele_platform/Examples/inputs/nord3.sge -> build/lib/pele_platform/Examples/inputs
2020-03-06T18:07:43   creating build/lib/pele_platform/Examples/out_in
2020-03-06T18:07:43   copying pele_platform/Examples/out_in/1_3ZON_complex.pdb -> build/lib/pele_platform/Examples/out_in
2020-03-06T18:07:43   copying pele_platform/Examples/out_in/input.yaml -> build/lib/pele_platform/Examples/out_in
2020-03-06T18:07:43   creating build/lib/pele_platform/Examples/pca
2020-03-06T18:07:43   copying pele_platform/Examples/pca/1.pdb -> build/lib/pele_platform/Examples/pca
2020-03-06T18:07:43   copying pele_platform/Examples/pca/2.pdb -> build/lib/pele_platform/Examples/pca
2020-03-06T18:07:43   copying pele_platform/Examples/pca/3.pdb -> build/lib/pele_platform/Examples/pca
2020-03-06T18:07:43   copying pele_platform/Examples/pca/input.yaml -> build/lib/pele_platform/Examples/pca
2020-03-06T18:07:43   creating build/lib/pele_platform/Examples/production
2020-03-06T18:07:43   copying pele_platform/Examples/production/input.sl -> build/lib/pele_platform/Examples/production
2020-03-06T18:07:43   copying pele_platform/Examples/production/input_mae.yaml -> build/lib/pele_platform/Examples/production
2020-03-06T18:07:43   creating build/lib/pele_platform/Examples/rescoring
2020-03-06T18:07:43   copying pele_platform/Examples/rescoring/input.yaml -> build/lib/pele_platform/Examples/rescoring
2020-03-06T18:07:43   copying pele_platform/Examples/rescoring/input_defaults.yaml -> build/lib/pele_platform/Examples/rescoring
2020-03-06T18:07:43   creating build/lib/pele_platform/Examples/restart
2020-03-06T18:07:43   copying pele_platform/Examples/restart/input.yaml -> build/lib/pele_platform/Examples/restart
2020-03-06T18:07:43   creating build/lib/pele_platform/Examples/water
2020-03-06T18:07:43   copying pele_platform/Examples/water/input_all.yaml -> build/lib/pele_platform/Examples/water
2020-03-06T18:07:43   copying pele_platform/Examples/water/input_bs.yaml -> build/lib/pele_platform/Examples/water
2020-03-06T18:07:43   copying pele_platform/Examples/water/input_bs_defaults.yaml -> build/lib/pele_platform/Examples/water
2020-03-06T18:07:43   copying pele_platform/Examples/water/input_lig.yaml -> build/lib/pele_platform/Examples/water
2020-03-06T18:07:43   copying pele_platform/Examples/water/input_lig_defaults.yaml -> build/lib/pele_platform/Examples/water
2020-03-06T18:07:43   copying pele_platform/Examples/water/water_processed.pdb -> build/lib/pele_platform/Examples/water
2020-03-06T18:07:43   creating build/lib/pele_platform/Templates
2020-03-06T18:07:43   copying pele_platform/Templates/pele_template.conf -> build/lib/pele_platform/Templates
2020-03-06T18:07:43   copying pele_platform/Templates/solventParamsHCTOBC.txt -> build/lib/pele_platform/Templates
2020-03-06T18:07:43   copying pele_platform/Templates/template_adaptive.conf -> build/lib/pele_platform/Templates
2020-03-06T18:07:43   creating build/lib/pele_platform/Utilities/PlopRotTemp/param
2020-03-06T18:07:43   copying pele_platform/Utilities/PlopRotTemp/param/f14_sgbnp.param -> build/lib/pele_platform/Utilities/PlopRotTemp/param
2020-03-06T18:07:43   copying pele_platform/Utilities/PlopRotTemp/param/params.cov -> build/lib/pele_platform/Utilities/PlopRotTemp/param
2020-03-06T18:07:43   copying pele_platform/Utilities/PlopRotTemp/param/params.nb -> build/lib/pele_platform/Utilities/PlopRotTemp/param
2020-03-06T18:07:43   copying pele_platform/Utilities/PlopRotTemp/param/sgbnp.param -> build/lib/pele_platform/Utilities/PlopRotTemp/param
2020-03-06T18:07:43   copying pele_platform/Utilities/PlopRotTemp/param/similarity.param -> build/lib/pele_platform/Utilities/PlopRotTemp/param
2020-03-06T18:07:43   installing to build/bdist.linux-armv7l/wheel
2020-03-06T18:07:43   running install
2020-03-06T18:07:43   running install_lib
2020-03-06T18:07:43   creating build/bdist.linux-armv7l
2020-03-06T18:07:43   creating build/bdist.linux-armv7l/wheel
2020-03-06T18:07:43   creating build/bdist.linux-armv7l/wheel/pele_platform
2020-03-06T18:07:43   creating build/bdist.linux-armv7l/wheel/pele_platform/constants
2020-03-06T18:07:43   copying build/lib/pele_platform/constants/constants.py -> build/bdist.linux-armv7l/wheel/pele_platform/constants
2020-03-06T18:07:43   copying build/lib/pele_platform/constants/__init__.py -> build/bdist.linux-armv7l/wheel/pele_platform/constants
2020-03-06T18:07:43   copying build/lib/pele_platform/constants/pele_params.py -> build/bdist.linux-armv7l/wheel/pele_platform/constants
2020-03-06T18:07:43   creating build/bdist.linux-armv7l/wheel/pele_platform/Analysis
2020-03-06T18:07:43   copying build/lib/pele_platform/Analysis/pdf_report.py -> build/bdist.linux-armv7l/wheel/pele_platform/Analysis
2020-03-06T18:07:43   copying build/lib/pele_platform/Analysis/__init__.py -> build/bdist.linux-armv7l/wheel/pele_platform/Analysis
2020-03-06T18:07:43   copying build/lib/pele_platform/Analysis/plots.py -> build/bdist.linux-armv7l/wheel/pele_platform/Analysis
2020-03-06T18:07:43   copying build/lib/pele_platform/Analysis/to_mae.py -> build/bdist.linux-armv7l/wheel/pele_platform/Analysis
2020-03-06T18:07:43   creating build/bdist.linux-armv7l/wheel/pele_platform/Templates
2020-03-06T18:07:43   copying build/lib/pele_platform/Templates/solventParamsHCTOBC.txt -> build/bdist.linux-armv7l/wheel/pele_platform/Templates
2020-03-06T18:07:43   copying build/lib/pele_platform/Templates/pele_template.conf -> build/bdist.linux-armv7l/wheel/pele_platform/Templates
2020-03-06T18:07:43   copying build/lib/pele_platform/Templates/template_adaptive.conf -> build/bdist.linux-armv7l/wheel/pele_platform/Templates
2020-03-06T18:07:43   copying build/lib/pele_platform/features.py -> build/bdist.linux-armv7l/wheel/pele_platform
2020-03-06T18:07:43   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples
2020-03-06T18:07:43   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/pca
2020-03-06T18:07:43   copying build/lib/pele_platform/Examples/pca/2.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/pca
2020-03-06T18:07:43   copying build/lib/pele_platform/Examples/pca/input.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/pca
2020-03-06T18:07:43   copying build/lib/pele_platform/Examples/pca/3.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/pca
2020-03-06T18:07:43   copying build/lib/pele_platform/Examples/pca/1.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/pca
2020-03-06T18:07:43   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/out_in
2020-03-06T18:07:43   copying build/lib/pele_platform/Examples/out_in/input.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/out_in
2020-03-06T18:07:43   copying build/lib/pele_platform/Examples/out_in/1_3ZON_complex.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/out_in
2020-03-06T18:07:43   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/bias
2020-03-06T18:07:43   copying build/lib/pele_platform/Examples/bias/input.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/bias
2020-03-06T18:07:43   copying build/lib/pele_platform/Examples/bias/complex.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/bias
2020-03-06T18:07:43   copying build/lib/pele_platform/Examples/bias/input_defaults.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/bias
2020-03-06T18:07:43   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/exit_soft
2020-03-06T18:07:43   copying build/lib/pele_platform/Examples/exit_soft/input.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/exit_soft
2020-03-06T18:07:43   copying build/lib/pele_platform/Examples/exit_soft/input_defaults.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/exit_soft
2020-03-06T18:07:43   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/inputs
2020-03-06T18:07:43   copying build/lib/pele_platform/Examples/inputs/nord3.sge -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/inputs
2020-03-06T18:07:43   copying build/lib/pele_platform/Examples/inputs/mn4.sl -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/inputs
2020-03-06T18:07:43   copying build/lib/pele_platform/Examples/inputs/input.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/inputs
2020-03-06T18:07:43   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/Msm
2020-03-06T18:07:43   copying build/lib/pele_platform/Examples/Msm/input.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/Msm
2020-03-06T18:07:43   copying build/lib/pele_platform/Examples/Msm/PR_AS4.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/Msm
2020-03-06T18:07:44   copying build/lib/pele_platform/Examples/Msm/AS4_INIT.mae -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/Msm
2020-03-06T18:07:44   copying build/lib/pele_platform/Examples/Msm/PR_1A28_xray_-_minimized.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/Msm
2020-03-06T18:07:44   copying build/lib/pele_platform/Examples/Msm/PR_1A28_protein.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/Msm
2020-03-06T18:07:44   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/exit
2020-03-06T18:07:44   copying build/lib/pele_platform/Examples/exit/input.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/exit
2020-03-06T18:07:44   copying build/lib/pele_platform/Examples/exit/input_defaults.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/exit
2020-03-06T18:07:44   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/rescoring
2020-03-06T18:07:44   copying build/lib/pele_platform/Examples/rescoring/input.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/rescoring
2020-03-06T18:07:44   copying build/lib/pele_platform/Examples/rescoring/input_defaults.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/rescoring
2020-03-06T18:07:44   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/global
2020-03-06T18:07:44   copying build/lib/pele_platform/Examples/global/input.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/global
2020-03-06T18:07:44   copying build/lib/pele_platform/Examples/global/input_defaults.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/global
2020-03-06T18:07:44   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/Frag
2020-03-06T18:07:44   copying build/lib/pele_platform/Examples/Frag/181l_prepared.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/Frag
2020-03-06T18:07:44   copying build/lib/pele_platform/Examples/Frag/methyl.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/Frag
2020-03-06T18:07:44   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/frag
2020-03-06T18:07:44   copying build/lib/pele_platform/Examples/frag/input_ai.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/frag
2020-03-06T18:07:44   copying build/lib/pele_platform/Examples/frag/core.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/frag
2020-03-06T18:07:44   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/flags
2020-03-06T18:07:44   copying build/lib/pele_platform/Examples/flags/input.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/flags
2020-03-06T18:07:44   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/water
2020-03-06T18:07:44   copying build/lib/pele_platform/Examples/water/input_bs.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/water
2020-03-06T18:07:44   copying build/lib/pele_platform/Examples/water/water_processed.pdb -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/water
2020-03-06T18:07:44   copying build/lib/pele_platform/Examples/water/input_all.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/water
2020-03-06T18:07:44   copying build/lib/pele_platform/Examples/water/input_lig_defaults.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/water
2020-03-06T18:07:44   copying build/lib/pele_platform/Examples/water/input_lig.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/water
2020-03-06T18:07:44   copying build/lib/pele_platform/Examples/water/input_bs_defaults.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/water
2020-03-06T18:07:44   copying build/lib/pele_platform/Examples/test.sl -> build/bdist.linux-armv7l/wheel/pele_platform/Examples
2020-03-06T18:07:44   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/restart
2020-03-06T18:07:44   copying build/lib/pele_platform/Examples/restart/input.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/restart
2020-03-06T18:07:44   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/production
2020-03-06T18:07:44   copying build/lib/pele_platform/Examples/production/input_mae.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/production
2020-03-06T18:07:44   copying build/lib/pele_platform/Examples/production/input.sl -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/production
2020-03-06T18:07:44   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/induced_fit
2020-03-06T18:07:44   copying build/lib/pele_platform/Examples/induced_fit/input_mae.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/induced_fit
2020-03-06T18:07:44   copying build/lib/pele_platform/Examples/induced_fit/input_fast.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/induced_fit
2020-03-06T18:07:44   copying build/lib/pele_platform/Examples/induced_fit/input_exhaustive_defaults.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/induced_fit
2020-03-06T18:07:44   copying build/lib/pele_platform/Examples/induced_fit/input_exhaustive.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/induced_fit
2020-03-06T18:07:44   copying build/lib/pele_platform/Examples/induced_fit/input_external_constraints.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/induced_fit
2020-03-06T18:07:44   copying build/lib/pele_platform/Examples/induced_fit/input_fast_defaults.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/induced_fit
2020-03-06T18:07:44   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/analysis
2020-03-06T18:07:44   copying build/lib/pele_platform/Examples/analysis/input.yaml -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/analysis
2020-03-06T18:07:44   creating build/bdist.linux-armv7l/wheel/pele_platform/Examples/Adaptive
2020-03-06T18:07:44   copying build/lib/pele_platform/Examples/Adaptive/STR.rot.assign -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/Adaptive
2020-03-06T18:07:44   copying build/lib/pele_platform/Examples/Adaptive/strz -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/Adaptive
2020-03-06T18:07:44   copying build/lib/pele_platform/Examples/Adaptive/test.sl -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/Adaptive
2020-03-06T18:07:44   copying build/lib/pele_platform/Examples/Adaptive/pele_file_4Adaptive.conf -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/Adaptive
2020-03-06T18:07:44   copying build/lib/pele_platform/Examples/Adaptive/adaptive.conf -> build/bdist.linux-armv7l/wheel/pele_platform/Examples/Adaptive
2020-03-06T18:07:44   copying build/lib/pele_platform/__init__.py -> build/bdist.linux-armv7l/wheel/pele_platform
2020-03-06T18:07:44   copying build/lib/pele_platform/main.py -> build/bdist.linux-armv7l/wheel/pele_platform
2020-03-06T18:07:44   creating build/bdist.linux-armv7l/wheel/pele_platform/Utilities
2020-03-06T18:07:44   creating build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Parameters
2020-03-06T18:07:44   creating build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Parameters/SimulationParams
2020-03-06T18:07:44   copying build/lib/pele_platform/Utilities/Parameters/SimulationParams/simulation_params.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Parameters/SimulationParams
2020-03-06T18:07:44   creating build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Parameters/SimulationParams/GlideParams
2020-03-06T18:07:44   copying build/lib/pele_platform/Utilities/Parameters/SimulationParams/GlideParams/glide_params.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Parameters/SimulationParams/GlideParams
2020-03-06T18:07:44   copying build/lib/pele_platform/Utilities/Parameters/SimulationParams/GlideParams/__init__.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Parameters/SimulationParams/GlideParams
2020-03-06T18:07:44   creating build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Parameters/SimulationParams/BiasParams
2020-03-06T18:07:44   copying build/lib/pele_platform/Utilities/Parameters/SimulationParams/BiasParams/bias_params.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Parameters/SimulationParams/BiasParams
2020-03-06T18:07:44   copying build/lib/pele_platform/Utilities/Parameters/SimulationParams/BiasParams/__init__.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Parameters/SimulationParams/BiasParams
2020-03-06T18:07:44   copying build/lib/pele_platform/Utilities/Parameters/SimulationParams/__init__.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Parameters/SimulationParams
2020-03-06T18:07:44   creating build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Parameters/SimulationParams/MSMParams
2020-03-06T18:07:44   copying build/lib/pele_platform/Utilities/Parameters/SimulationParams/MSMParams/__init__.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Parameters/SimulationParams/MSMParams
2020-03-06T18:07:44   copying build/lib/pele_platform/Utilities/Parameters/SimulationParams/MSMParams/msm_params.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Parameters/SimulationParams/MSMParams
2020-03-06T18:07:44   creating build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Parameters/SimulationParams/PCA
2020-03-06T18:07:44   copying build/lib/pele_platform/Utilities/Parameters/SimulationParams/PCA/pca.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Parameters/SimulationParams/PCA
2020-03-06T18:07:44   copying build/lib/pele_platform/Utilities/Parameters/SimulationParams/PCA/__init__.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Parameters/SimulationParams/PCA
2020-03-06T18:07:44   creating build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Parameters/SimulationParams/InOutParams
2020-03-06T18:07:44   copying build/lib/pele_platform/Utilities/Parameters/SimulationParams/InOutParams/__init__.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Parameters/SimulationParams/InOutParams
2020-03-06T18:07:44   copying build/lib/pele_platform/Utilities/Parameters/SimulationParams/InOutParams/inout_params.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Parameters/SimulationParams/InOutParams
2020-03-06T18:07:44   creating build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Parameters/SimulationParams/WaterExp
2020-03-06T18:07:44   copying build/lib/pele_platform/Utilities/Parameters/SimulationParams/WaterExp/__init__.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Parameters/SimulationParams/WaterExp
2020-03-06T18:07:44   copying build/lib/pele_platform/Utilities/Parameters/SimulationParams/WaterExp/waterexp_params.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Parameters/SimulationParams/WaterExp
2020-03-06T18:07:44   copying build/lib/pele_platform/Utilities/Parameters/pele_env.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Parameters
2020-03-06T18:07:44   creating build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Parameters/SimulationFolders
2020-03-06T18:07:44   copying build/lib/pele_platform/Utilities/Parameters/SimulationFolders/simulation_folders.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Parameters/SimulationFolders
2020-03-06T18:07:44   creating build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Parameters/SimulationFolders/GlideFolders
2020-03-06T18:07:44   copying build/lib/pele_platform/Utilities/Parameters/SimulationFolders/GlideFolders/glide_folders.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Parameters/SimulationFolders/GlideFolders
2020-03-06T18:07:44   copying build/lib/pele_platform/Utilities/Parameters/SimulationFolders/GlideFolders/__init__.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Parameters/SimulationFolders/GlideFolders
2020-03-06T18:07:44   copying build/lib/pele_platform/Utilities/Parameters/SimulationFolders/__init__.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Parameters/SimulationFolders
2020-03-06T18:07:44   creating build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Parameters/SimulationFolders/MSMFolders
2020-03-06T18:07:44   copying build/lib/pele_platform/Utilities/Parameters/SimulationFolders/MSMFolders/msm_folders.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Parameters/SimulationFolders/MSMFolders
2020-03-06T18:07:44   copying build/lib/pele_platform/Utilities/Parameters/SimulationFolders/MSMFolders/__init__.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Parameters/SimulationFolders/MSMFolders
2020-03-06T18:07:44   copying build/lib/pele_platform/Utilities/Parameters/__init__.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Parameters
2020-03-06T18:07:44   creating build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Helpers
2020-03-06T18:07:44   copying build/lib/pele_platform/Utilities/Helpers/metrics.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Helpers
2020-03-06T18:07:44   copying build/lib/pele_platform/Utilities/Helpers/prepwizard.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Helpers
2020-03-06T18:07:44   copying build/lib/pele_platform/Utilities/Helpers/check_env_var.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Helpers
2020-03-06T18:07:44   copying build/lib/pele_platform/Utilities/Helpers/split_trajectories.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Helpers
2020-03-06T18:07:44   copying build/lib/pele_platform/Utilities/Helpers/best_structs.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Helpers
2020-03-06T18:07:44   copying build/lib/pele_platform/Utilities/Helpers/tica.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Helpers
2020-03-06T18:07:44   copying build/lib/pele_platform/Utilities/Helpers/template_builder.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Helpers
2020-03-06T18:07:44   copying build/lib/pele_platform/Utilities/Helpers/simulation.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Helpers
2020-03-06T18:07:44   copying build/lib/pele_platform/Utilities/Helpers/system_prep.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Helpers
2020-03-06T18:07:44   copying build/lib/pele_platform/Utilities/Helpers/missing_residues.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Helpers
2020-03-06T18:07:44   copying build/lib/pele_platform/Utilities/Helpers/calculatePCA4PELE.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Helpers
2020-03-06T18:07:44   copying build/lib/pele_platform/Utilities/Helpers/__init__.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Helpers
2020-03-06T18:07:44   copying build/lib/pele_platform/Utilities/Helpers/conda_deployment.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Helpers
2020-03-06T18:07:44   copying build/lib/pele_platform/Utilities/Helpers/constraints.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Helpers
2020-03-06T18:07:44   copying build/lib/pele_platform/Utilities/Helpers/randomize.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Helpers
2020-03-06T18:07:44   copying build/lib/pele_platform/Utilities/Helpers/helpers.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Helpers
2020-03-06T18:07:44   copying build/lib/pele_platform/Utilities/Helpers/solventOBCParamsGenerator.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Helpers
2020-03-06T18:07:44   copying build/lib/pele_platform/Utilities/Helpers/center_of_mass.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Helpers
2020-03-06T18:07:44   copying build/lib/pele_platform/Utilities/Helpers/external_files.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/Helpers
2020-03-06T18:07:44   copying build/lib/pele_platform/Utilities/__init__.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities
2020-03-06T18:07:44   creating build/bdist.linux-armv7l/wheel/pele_platform/Utilities/PlopRotTemp
2020-03-06T18:07:44   copying build/lib/pele_platform/Utilities/PlopRotTemp/PlopRotTemp.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/PlopRotTemp
2020-03-06T18:07:44   creating build/bdist.linux-armv7l/wheel/pele_platform/Utilities/PlopRotTemp/param
2020-03-06T18:07:44   copying build/lib/pele_platform/Utilities/PlopRotTemp/param/params.nb -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/PlopRotTemp/param
2020-03-06T18:07:44   copying build/lib/pele_platform/Utilities/PlopRotTemp/param/similarity.param -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/PlopRotTemp/param
2020-03-06T18:07:44   copying build/lib/pele_platform/Utilities/PlopRotTemp/param/params.cov -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/PlopRotTemp/param
2020-03-06T18:07:44   copying build/lib/pele_platform/Utilities/PlopRotTemp/param/sgbnp.param -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/PlopRotTemp/param
2020-03-06T18:07:44   copying build/lib/pele_platform/Utilities/PlopRotTemp/param/f14_sgbnp.param -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/PlopRotTemp/param
2020-03-06T18:07:44   copying build/lib/pele_platform/Utilities/PlopRotTemp/__init__.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/PlopRotTemp
2020-03-06T18:07:44   copying build/lib/pele_platform/Utilities/PlopRotTemp/main.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/PlopRotTemp
2020-03-06T18:07:44   creating build/bdist.linux-armv7l/wheel/pele_platform/Utilities/PlopRotTemp/template
2020-03-06T18:07:44   copying build/lib/pele_platform/Utilities/PlopRotTemp/template/templateBuilder.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/PlopRotTemp/template
2020-03-06T18:07:44   copying build/lib/pele_platform/Utilities/PlopRotTemp/template/__init__.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/PlopRotTemp/template
2020-03-06T18:07:44   copying build/lib/pele_platform/Utilities/PlopRotTemp/template/tmp_helpers.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/PlopRotTemp/template
2020-03-06T18:07:44   copying build/lib/pele_platform/Utilities/PlopRotTemp/template/chargeHandler.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/PlopRotTemp/template
2020-03-06T18:07:44   copying build/lib/pele_platform/Utilities/PlopRotTemp/launcher.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/PlopRotTemp
2020-03-06T18:07:44   creating build/bdist.linux-armv7l/wheel/pele_platform/Utilities/PlopRotTemp/Utilities
2020-03-06T18:07:44   copying build/lib/pele_platform/Utilities/PlopRotTemp/Utilities/non_standard_res.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/PlopRotTemp/Utilities
2020-03-06T18:07:44   copying build/lib/pele_platform/Utilities/PlopRotTemp/Utilities/__init__.py -> build/bdist.linux-armv7l/wheel/pele_platform/Utilities/PlopRotTemp/Utilities
2020-03-06T18:07:44   creating build/bdist.linux-armv7l/wheel/pele_platform/Adaptive
2020-03-06T18:07:44   copying build/lib/pele_platform/Adaptive/simulation.py -> build/bdist.linux-armv7l/wheel/pele_platform/Adaptive
2020-03-06T18:07:44   copying build/lib/pele_platform/Adaptive/__init__.py -> build/bdist.linux-armv7l/wheel/pele_platform/Adaptive
2020-03-06T18:07:44   copying build/lib/pele_platform/Adaptive/main.py -> build/bdist.linux-armv7l/wheel/pele_platform/Adaptive
2020-03-06T18:07:44   running install_egg_info
2020-03-06T18:07:44   Copying pele_platform.egg-info to build/bdist.linux-armv7l/wheel/pele_platform-1.3.3-py3.5.egg-info
2020-03-06T18:07:44   running install_scripts
2020-03-06T18:07:45   creating build/bdist.linux-armv7l/wheel/pele_platform-1.3.3.dist-info/WHEEL
2020-03-06T18:07:47   Building wheel for pele-platform (setup.py): finished with status 'done'
2020-03-06T18:07:47   Stored in directory: /tmp/tmp_bbnk5sk
2020-03-06T18:07:47 Successfully built pele-platform
2020-03-06T18:07:47 Cleaning up...
2020-03-06T18:07:47   Removing source in /tmp/pip-wheel-lt2x996v/pele-platform
2020-03-06T18:07:47 Removed build tracker '/tmp/pip-req-tracker-1s5066f9'