2020-03-12T09:13:46 Created temporary directory: /tmp/pip-ephem-wheel-cache-__huk56u 2020-03-12T09:13:46 Created temporary directory: /tmp/pip-req-tracker-hxw0ttqs 2020-03-12T09:13:46 Created requirements tracker '/tmp/pip-req-tracker-hxw0ttqs' 2020-03-12T09:13:46 Created temporary directory: /tmp/pip-wheel-65433bcm 2020-03-12T09:13:46 Collecting sequana-bioconvert==0.8.1 2020-03-12T09:13:46 1 location(s) to search for versions of sequana-bioconvert: 2020-03-12T09:13:46 * https://pypi.org/simple/sequana-bioconvert/ 2020-03-12T09:13:46 Getting page https://pypi.org/simple/sequana-bioconvert/ 2020-03-12T09:13:46 Analyzing links from page https://pypi.org/simple/sequana-bioconvert/ 2020-03-12T09:13:47 Found link https://files.pythonhosted.org/packages/66/81/c4772d89b82fc42c25ef1839fe13b0f621f5f8df423b0adfbd2584295df2/sequana_bioconvert-0.8.0.tar.gz#sha256=e8f2445ef4921f4a4873226258ee73b266e937f73518fd662d6818a48e334298 (from https://pypi.org/simple/sequana-bioconvert/), version: 0.8.0 2020-03-12T09:13:47 Found link https://files.pythonhosted.org/packages/14/db/93453ee92a8f4556ca1371c53efe89cd9a51a4cb98efa98f6035ac1b9d6d/sequana_bioconvert-0.8.1.tar.gz#sha256=c566aedefb23dbd3e24a9d62d1eadfe3896d9dbcd1e8f335833e6f1b1ab5bc5f (from https://pypi.org/simple/sequana-bioconvert/), version: 0.8.1 2020-03-12T09:13:47 Using version 0.8.1 (newest of versions: 0.8.1) 2020-03-12T09:13:47 Created temporary directory: /tmp/pip-unpack-pocym2z1 2020-03-12T09:13:47 Downloading https://files.pythonhosted.org/packages/14/db/93453ee92a8f4556ca1371c53efe89cd9a51a4cb98efa98f6035ac1b9d6d/sequana_bioconvert-0.8.1.tar.gz (108kB) 2020-03-12T09:13:47 Downloading from URL https://files.pythonhosted.org/packages/14/db/93453ee92a8f4556ca1371c53efe89cd9a51a4cb98efa98f6035ac1b9d6d/sequana_bioconvert-0.8.1.tar.gz#sha256=c566aedefb23dbd3e24a9d62d1eadfe3896d9dbcd1e8f335833e6f1b1ab5bc5f (from https://pypi.org/simple/sequana-bioconvert/) 2020-03-12T09:13:47 Added sequana-bioconvert==0.8.1 from https://files.pythonhosted.org/packages/14/db/93453ee92a8f4556ca1371c53efe89cd9a51a4cb98efa98f6035ac1b9d6d/sequana_bioconvert-0.8.1.tar.gz#sha256=c566aedefb23dbd3e24a9d62d1eadfe3896d9dbcd1e8f335833e6f1b1ab5bc5f to build tracker '/tmp/pip-req-tracker-hxw0ttqs' 2020-03-12T09:13:47 Running setup.py (path:/tmp/pip-wheel-65433bcm/sequana-bioconvert/setup.py) egg_info for package sequana-bioconvert 2020-03-12T09:13:47 Running command python setup.py egg_info 2020-03-12T09:13:48 running egg_info 2020-03-12T09:13:48 creating pip-egg-info/sequana_bioconvert.egg-info 2020-03-12T09:13:48 writing pip-egg-info/sequana_bioconvert.egg-info/PKG-INFO 2020-03-12T09:13:48 writing dependency_links to pip-egg-info/sequana_bioconvert.egg-info/dependency_links.txt 2020-03-12T09:13:48 writing entry points to pip-egg-info/sequana_bioconvert.egg-info/entry_points.txt 2020-03-12T09:13:48 writing requirements to pip-egg-info/sequana_bioconvert.egg-info/requires.txt 2020-03-12T09:13:48 writing top-level names to pip-egg-info/sequana_bioconvert.egg-info/top_level.txt 2020-03-12T09:13:48 writing manifest file 'pip-egg-info/sequana_bioconvert.egg-info/SOURCES.txt' 2020-03-12T09:13:49 reading manifest file 'pip-egg-info/sequana_bioconvert.egg-info/SOURCES.txt' 2020-03-12T09:13:49 writing manifest file 'pip-egg-info/sequana_bioconvert.egg-info/SOURCES.txt' 2020-03-12T09:13:49 Source in /tmp/pip-wheel-65433bcm/sequana-bioconvert has version 0.8.1, which satisfies requirement sequana-bioconvert==0.8.1 from https://files.pythonhosted.org/packages/14/db/93453ee92a8f4556ca1371c53efe89cd9a51a4cb98efa98f6035ac1b9d6d/sequana_bioconvert-0.8.1.tar.gz#sha256=c566aedefb23dbd3e24a9d62d1eadfe3896d9dbcd1e8f335833e6f1b1ab5bc5f 2020-03-12T09:13:49 Removed sequana-bioconvert==0.8.1 from https://files.pythonhosted.org/packages/14/db/93453ee92a8f4556ca1371c53efe89cd9a51a4cb98efa98f6035ac1b9d6d/sequana_bioconvert-0.8.1.tar.gz#sha256=c566aedefb23dbd3e24a9d62d1eadfe3896d9dbcd1e8f335833e6f1b1ab5bc5f from build tracker '/tmp/pip-req-tracker-hxw0ttqs' 2020-03-12T09:13:49 Building wheels for collected packages: sequana-bioconvert 2020-03-12T09:13:49 Created temporary directory: /tmp/pip-wheel-_2qpghj_ 2020-03-12T09:13:49 Building wheel for sequana-bioconvert (setup.py): started 2020-03-12T09:13:49 Destination directory: /tmp/pip-wheel-_2qpghj_ 2020-03-12T09:13:49 Running command /usr/bin/python3 -u -c 'import setuptools, tokenize;__file__='"'"'/tmp/pip-wheel-65433bcm/sequana-bioconvert/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-_2qpghj_ 2020-03-12T09:13:50 running bdist_wheel 2020-03-12T09:13:50 running build 2020-03-12T09:13:50 running build_py 2020-03-12T09:13:50 creating build 2020-03-12T09:13:50 creating build/lib 2020-03-12T09:13:50 creating build/lib/sequana_pipelines 2020-03-12T09:13:50 creating build/lib/sequana_pipelines/bioconvert 2020-03-12T09:13:50 copying sequana_pipelines/bioconvert/main.py -> build/lib/sequana_pipelines/bioconvert 2020-03-12T09:13:50 copying sequana_pipelines/bioconvert/__init__.py -> build/lib/sequana_pipelines/bioconvert 2020-03-12T09:13:50 creating build/lib/sequana_pipelines/bioconvert/data 2020-03-12T09:13:50 copying sequana_pipelines/bioconvert/data/__init__.py -> build/lib/sequana_pipelines/bioconvert/data 2020-03-12T09:13:50 copying sequana_pipelines/bioconvert/config.yaml -> build/lib/sequana_pipelines/bioconvert 2020-03-12T09:13:50 copying sequana_pipelines/bioconvert/schema.yaml -> build/lib/sequana_pipelines/bioconvert 2020-03-12T09:13:50 copying sequana_pipelines/bioconvert/bioconvert.rules -> build/lib/sequana_pipelines/bioconvert 2020-03-12T09:13:50 copying sequana_pipelines/bioconvert/requirements.txt -> build/lib/sequana_pipelines/bioconvert 2020-03-12T09:13:50 copying sequana_pipelines/bioconvert/data/data_R2_001.fastq.gz -> build/lib/sequana_pipelines/bioconvert/data 2020-03-12T09:13:50 copying sequana_pipelines/bioconvert/data/data_R2_001.fasta.gz -> build/lib/sequana_pipelines/bioconvert/data 2020-03-12T09:13:50 copying sequana_pipelines/bioconvert/data/data_R1_001.fasta.gz -> build/lib/sequana_pipelines/bioconvert/data 2020-03-12T09:13:50 copying sequana_pipelines/bioconvert/data/data_R1_001.fastq.gz -> build/lib/sequana_pipelines/bioconvert/data 2020-03-12T09:13:50 installing to build/bdist.linux-armv7l/wheel 2020-03-12T09:13:50 running install 2020-03-12T09:13:50 running install_lib 2020-03-12T09:13:50 creating build/bdist.linux-armv7l 2020-03-12T09:13:50 creating build/bdist.linux-armv7l/wheel 2020-03-12T09:13:50 creating build/bdist.linux-armv7l/wheel/sequana_pipelines 2020-03-12T09:13:50 creating build/bdist.linux-armv7l/wheel/sequana_pipelines/bioconvert 2020-03-12T09:13:50 creating build/bdist.linux-armv7l/wheel/sequana_pipelines/bioconvert/data 2020-03-12T09:13:50 copying build/lib/sequana_pipelines/bioconvert/data/data_R2_001.fastq.gz -> build/bdist.linux-armv7l/wheel/sequana_pipelines/bioconvert/data 2020-03-12T09:13:50 copying build/lib/sequana_pipelines/bioconvert/data/data_R2_001.fasta.gz -> build/bdist.linux-armv7l/wheel/sequana_pipelines/bioconvert/data 2020-03-12T09:13:50 copying build/lib/sequana_pipelines/bioconvert/data/data_R1_001.fasta.gz -> build/bdist.linux-armv7l/wheel/sequana_pipelines/bioconvert/data 2020-03-12T09:13:50 copying build/lib/sequana_pipelines/bioconvert/data/data_R1_001.fastq.gz -> build/bdist.linux-armv7l/wheel/sequana_pipelines/bioconvert/data 2020-03-12T09:13:50 copying build/lib/sequana_pipelines/bioconvert/data/__init__.py -> build/bdist.linux-armv7l/wheel/sequana_pipelines/bioconvert/data 2020-03-12T09:13:50 copying build/lib/sequana_pipelines/bioconvert/requirements.txt -> build/bdist.linux-armv7l/wheel/sequana_pipelines/bioconvert 2020-03-12T09:13:50 copying build/lib/sequana_pipelines/bioconvert/config.yaml -> build/bdist.linux-armv7l/wheel/sequana_pipelines/bioconvert 2020-03-12T09:13:50 copying build/lib/sequana_pipelines/bioconvert/schema.yaml -> build/bdist.linux-armv7l/wheel/sequana_pipelines/bioconvert 2020-03-12T09:13:50 copying build/lib/sequana_pipelines/bioconvert/main.py -> build/bdist.linux-armv7l/wheel/sequana_pipelines/bioconvert 2020-03-12T09:13:50 copying build/lib/sequana_pipelines/bioconvert/bioconvert.rules -> build/bdist.linux-armv7l/wheel/sequana_pipelines/bioconvert 2020-03-12T09:13:50 copying build/lib/sequana_pipelines/bioconvert/__init__.py -> build/bdist.linux-armv7l/wheel/sequana_pipelines/bioconvert 2020-03-12T09:13:50 running install_egg_info 2020-03-12T09:13:50 running egg_info 2020-03-12T09:13:50 writing sequana_bioconvert.egg-info/PKG-INFO 2020-03-12T09:13:50 writing dependency_links to sequana_bioconvert.egg-info/dependency_links.txt 2020-03-12T09:13:50 writing entry points to sequana_bioconvert.egg-info/entry_points.txt 2020-03-12T09:13:50 writing requirements to sequana_bioconvert.egg-info/requires.txt 2020-03-12T09:13:50 writing top-level names to sequana_bioconvert.egg-info/top_level.txt 2020-03-12T09:13:50 reading manifest file 'sequana_bioconvert.egg-info/SOURCES.txt' 2020-03-12T09:13:50 writing manifest file 'sequana_bioconvert.egg-info/SOURCES.txt' 2020-03-12T09:13:50 Copying sequana_bioconvert.egg-info to build/bdist.linux-armv7l/wheel/sequana_bioconvert-0.8.1-py3.7.egg-info 2020-03-12T09:13:51 running install_scripts 2020-03-12T09:13:51 creating build/bdist.linux-armv7l/wheel/sequana_bioconvert-0.8.1.dist-info/WHEEL 2020-03-12T09:13:51 creating '/tmp/pip-wheel-_2qpghj_/sequana_bioconvert-0.8.1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2020-03-12T09:13:51 adding 'sequana_pipelines/bioconvert/__init__.py' 2020-03-12T09:13:51 adding 'sequana_pipelines/bioconvert/bioconvert.rules' 2020-03-12T09:13:51 adding 'sequana_pipelines/bioconvert/config.yaml' 2020-03-12T09:13:51 adding 'sequana_pipelines/bioconvert/main.py' 2020-03-12T09:13:51 adding 'sequana_pipelines/bioconvert/requirements.txt' 2020-03-12T09:13:51 adding 'sequana_pipelines/bioconvert/schema.yaml' 2020-03-12T09:13:51 adding 'sequana_pipelines/bioconvert/data/__init__.py' 2020-03-12T09:13:51 adding 'sequana_pipelines/bioconvert/data/data_R1_001.fasta.gz' 2020-03-12T09:13:51 adding 'sequana_pipelines/bioconvert/data/data_R1_001.fastq.gz' 2020-03-12T09:13:51 adding 'sequana_pipelines/bioconvert/data/data_R2_001.fasta.gz' 2020-03-12T09:13:51 adding 'sequana_pipelines/bioconvert/data/data_R2_001.fastq.gz' 2020-03-12T09:13:51 adding 'sequana_bioconvert-0.8.1.dist-info/METADATA' 2020-03-12T09:13:51 adding 'sequana_bioconvert-0.8.1.dist-info/WHEEL' 2020-03-12T09:13:51 adding 'sequana_bioconvert-0.8.1.dist-info/entry_points.txt' 2020-03-12T09:13:51 adding 'sequana_bioconvert-0.8.1.dist-info/top_level.txt' 2020-03-12T09:13:51 adding 'sequana_bioconvert-0.8.1.dist-info/RECORD' 2020-03-12T09:13:51 removing build/bdist.linux-armv7l/wheel 2020-03-12T09:13:51 Building wheel for sequana-bioconvert (setup.py): finished with status 'done' 2020-03-12T09:13:51 Stored in directory: /tmp/tmp4dx0s1zc 2020-03-12T09:13:51 Successfully built sequana-bioconvert 2020-03-12T09:13:51 Cleaning up... 2020-03-12T09:13:51 Removing source in /tmp/pip-wheel-65433bcm/sequana-bioconvert 2020-03-12T09:13:51 Removed build tracker '/tmp/pip-req-tracker-hxw0ttqs'