2020-03-13T16:08:02 Created temporary directory: /tmp/pip-ephem-wheel-cache-gtfg4uxg
2020-03-13T16:08:02 Created temporary directory: /tmp/pip-req-tracker-wk028kaa
2020-03-13T16:08:02 Created requirements tracker '/tmp/pip-req-tracker-wk028kaa'
2020-03-13T16:08:02 Created temporary directory: /tmp/pip-wheel-wfzr68dn
2020-03-13T16:08:02 Collecting GenomeTreeTk==0.1.0
2020-03-13T16:08:02   1 location(s) to search for versions of GenomeTreeTk:
2020-03-13T16:08:02   * https://pypi.org/simple/genometreetk/
2020-03-13T16:08:02   Getting page https://pypi.org/simple/genometreetk/
2020-03-13T16:08:02   Analyzing links from page https://pypi.org/simple/genometreetk/
2020-03-13T16:08:03     Found link https://files.pythonhosted.org/packages/5e/b0/ebf937461322f1c319bebf47d609459104c5f1961eb95ad3c2cc953ded47/GenomeTreeTk-0.0.4.tar.gz#sha256=56d61904b388982e763720e03f3ff3a251016febde5aabf9e72faf4522f31f4f (from https://pypi.org/simple/genometreetk/), version: 0.0.4
2020-03-13T16:08:03     Found link https://files.pythonhosted.org/packages/cf/87/638d4e64c4f511abd4336b88ca4ff4b426777147a338a70b5867807a5278/GenomeTreeTk-0.0.18.tar.gz#sha256=8ad76555c1572344cf32a041073e1dc9b410b41028ee4220b7759763c16209bc (from https://pypi.org/simple/genometreetk/), version: 0.0.18
2020-03-13T16:08:03     Found link https://files.pythonhosted.org/packages/87/2c/f5c06ec3ef8184f44a9e1a36fe10c0bc1c280b97c0c264586441a3521ca8/GenomeTreeTk-0.0.21.tar.gz#sha256=bbd011e72971e1281a9f3b5dde6f17590ba7963bbd64c306a2ec2d0f77c26479 (from https://pypi.org/simple/genometreetk/), version: 0.0.21
2020-03-13T16:08:03     Found link https://files.pythonhosted.org/packages/29/96/33971faf54258e25d6ecf64eb8f28cd08a9adb1c3fbb478dd01e06ac2f83/GenomeTreeTk-0.0.31.tar.gz#sha256=0d647769b1aa5b9af828e4eea3e85d824485e9da20b0b66117256c24228ed531 (from https://pypi.org/simple/genometreetk/), version: 0.0.31
2020-03-13T16:08:03     Found link https://files.pythonhosted.org/packages/17/1a/5e1043083d53d846a32684d8d932ef849ad400f5a673f59ee60dd39ce250/GenomeTreeTk-0.0.32.tar.gz#sha256=0cc394174dc13ccadbf98c345add23698a9726dccbdc18519695c93b568958c2 (from https://pypi.org/simple/genometreetk/), version: 0.0.32
2020-03-13T16:08:03     Found link https://files.pythonhosted.org/packages/4b/cc/7bd02ea62b4ec9f4cbfc19212734eadd2973e17833fd4d144c0122691fa8/GenomeTreeTk-0.0.36.tar.gz#sha256=f71569612765c4be50962915bd41d0407fa425a3a14fcba04303995b91d1d3ad (from https://pypi.org/simple/genometreetk/), version: 0.0.36
2020-03-13T16:08:03     Found link https://files.pythonhosted.org/packages/01/44/6a37ff701b59a0b1ca7100574aa4337ed28aa94d434f311c592ae2c3812d/GenomeTreeTk-0.0.37.tar.gz#sha256=645e3f92373d2bd05bd430cfca84874a731820ca0f1da26b190db791e153028c (from https://pypi.org/simple/genometreetk/), version: 0.0.37
2020-03-13T16:08:03     Found link https://files.pythonhosted.org/packages/0a/e5/da880d6c1079f36afc8c13e9279a2561050a6e6497750a81df01f226d822/GenomeTreeTk-0.0.54.tar.gz#sha256=2947db56a1b8e9fd9e8d7f1f73fa75d1af67ee44ff8a058a18c70dc544d36b6b (from https://pypi.org/simple/genometreetk/), version: 0.0.54
2020-03-13T16:08:03     Found link https://files.pythonhosted.org/packages/26/49/6781e0b62a0b54023859343e60d2f91ecc0991be0d4fa0684fdd3c8dd662/GenomeTreeTk-0.0.55.tar.gz#sha256=2dd8779194c73db5f54d29d97be36a3754f382a7398f9fc55e49aa43e4991545 (from https://pypi.org/simple/genometreetk/), version: 0.0.55
2020-03-13T16:08:03     Found link https://files.pythonhosted.org/packages/19/81/1f0cfeac4c049d74e6086de5a46fb4175cdaf45d979f0b511e2f781a254c/GenomeTreeTk-0.1.0.tar.gz#sha256=6e5ca8a5fa38081f818ba28d81715878a962a690b20a3096afd64d11387c6714 (from https://pypi.org/simple/genometreetk/), version: 0.1.0
2020-03-13T16:08:03   Using version 0.1.0 (newest of versions: 0.1.0)
2020-03-13T16:08:03   Created temporary directory: /tmp/pip-unpack-g672fg27
2020-03-13T16:08:03   Downloading https://files.pythonhosted.org/packages/19/81/1f0cfeac4c049d74e6086de5a46fb4175cdaf45d979f0b511e2f781a254c/GenomeTreeTk-0.1.0.tar.gz (56kB)
2020-03-13T16:08:03   Downloading from URL https://files.pythonhosted.org/packages/19/81/1f0cfeac4c049d74e6086de5a46fb4175cdaf45d979f0b511e2f781a254c/GenomeTreeTk-0.1.0.tar.gz#sha256=6e5ca8a5fa38081f818ba28d81715878a962a690b20a3096afd64d11387c6714 (from https://pypi.org/simple/genometreetk/)
2020-03-13T16:08:03   Added GenomeTreeTk==0.1.0 from https://files.pythonhosted.org/packages/19/81/1f0cfeac4c049d74e6086de5a46fb4175cdaf45d979f0b511e2f781a254c/GenomeTreeTk-0.1.0.tar.gz#sha256=6e5ca8a5fa38081f818ba28d81715878a962a690b20a3096afd64d11387c6714 to build tracker '/tmp/pip-req-tracker-wk028kaa'
2020-03-13T16:08:03     Running setup.py (path:/tmp/pip-wheel-wfzr68dn/GenomeTreeTk/setup.py) egg_info for package GenomeTreeTk
2020-03-13T16:08:03     Running command python setup.py egg_info
2020-03-13T16:08:05     running egg_info
2020-03-13T16:08:05     creating pip-egg-info/GenomeTreeTk.egg-info
2020-03-13T16:08:05     writing dependency_links to pip-egg-info/GenomeTreeTk.egg-info/dependency_links.txt
2020-03-13T16:08:05     writing top-level names to pip-egg-info/GenomeTreeTk.egg-info/top_level.txt
2020-03-13T16:08:05     writing requirements to pip-egg-info/GenomeTreeTk.egg-info/requires.txt
2020-03-13T16:08:05     writing pip-egg-info/GenomeTreeTk.egg-info/PKG-INFO
2020-03-13T16:08:05     writing manifest file 'pip-egg-info/GenomeTreeTk.egg-info/SOURCES.txt'
2020-03-13T16:08:05     reading manifest file 'pip-egg-info/GenomeTreeTk.egg-info/SOURCES.txt'
2020-03-13T16:08:05     writing manifest file 'pip-egg-info/GenomeTreeTk.egg-info/SOURCES.txt'
2020-03-13T16:08:06   Source in /tmp/pip-wheel-wfzr68dn/GenomeTreeTk has version 0.1.0, which satisfies requirement GenomeTreeTk==0.1.0 from https://files.pythonhosted.org/packages/19/81/1f0cfeac4c049d74e6086de5a46fb4175cdaf45d979f0b511e2f781a254c/GenomeTreeTk-0.1.0.tar.gz#sha256=6e5ca8a5fa38081f818ba28d81715878a962a690b20a3096afd64d11387c6714
2020-03-13T16:08:06   Removed GenomeTreeTk==0.1.0 from https://files.pythonhosted.org/packages/19/81/1f0cfeac4c049d74e6086de5a46fb4175cdaf45d979f0b511e2f781a254c/GenomeTreeTk-0.1.0.tar.gz#sha256=6e5ca8a5fa38081f818ba28d81715878a962a690b20a3096afd64d11387c6714 from build tracker '/tmp/pip-req-tracker-wk028kaa'
2020-03-13T16:08:06 Building wheels for collected packages: GenomeTreeTk
2020-03-13T16:08:06   Created temporary directory: /tmp/pip-wheel-6dke_l0i
2020-03-13T16:08:06   Building wheel for GenomeTreeTk (setup.py): started
2020-03-13T16:08:06   Destination directory: /tmp/pip-wheel-6dke_l0i
2020-03-13T16:08:06   Running command /usr/bin/python3 -u -c 'import setuptools, tokenize;__file__='"'"'/tmp/pip-wheel-wfzr68dn/GenomeTreeTk/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-6dke_l0i
2020-03-13T16:08:07   running bdist_wheel
2020-03-13T16:08:07   running build
2020-03-13T16:08:07   running build_py
2020-03-13T16:08:08   creating build
2020-03-13T16:08:08   creating build/lib
2020-03-13T16:08:08   creating build/lib/genometreetk
2020-03-13T16:08:08   copying genometreetk/tree_support.py -> build/lib/genometreetk
2020-03-13T16:08:08   copying genometreetk/exceptions.py -> build/lib/genometreetk
2020-03-13T16:08:08   copying genometreetk/jackknife_markers.py -> build/lib/genometreetk
2020-03-13T16:08:08   copying genometreetk/infer_workflow.py -> build/lib/genometreetk
2020-03-13T16:08:08   copying genometreetk/bootstrap.py -> build/lib/genometreetk
2020-03-13T16:08:08   copying genometreetk/phylogenetic_diversity.py -> build/lib/genometreetk
2020-03-13T16:08:08   copying genometreetk/rna_workflow.py -> build/lib/genometreetk
2020-03-13T16:08:08   copying genometreetk/reroot_tree.py -> build/lib/genometreetk
2020-03-13T16:08:08   copying genometreetk/derep_tree.py -> build/lib/genometreetk
2020-03-13T16:08:08   copying genometreetk/jackknife_taxa.py -> build/lib/genometreetk
2020-03-13T16:08:08   copying genometreetk/__init__.py -> build/lib/genometreetk
2020-03-13T16:08:08   copying genometreetk/main.py -> build/lib/genometreetk
2020-03-13T16:08:08   copying genometreetk/default_values.py -> build/lib/genometreetk
2020-03-13T16:08:08   copying genometreetk/combine_support.py -> build/lib/genometreetk
2020-03-13T16:08:08   copying genometreetk/arb.py -> build/lib/genometreetk
2020-03-13T16:08:08   copying genometreetk/aai.py -> build/lib/genometreetk
2020-03-13T16:08:08   copying genometreetk/ncbi.py -> build/lib/genometreetk
2020-03-13T16:08:08   copying genometreetk/common.py -> build/lib/genometreetk
2020-03-13T16:08:08   creating build/lib/genometreetk/markers
2020-03-13T16:08:08   copying genometreetk/markers/infer_markers.py -> build/lib/genometreetk/markers
2020-03-13T16:08:08   copying genometreetk/markers/lgt_test.py -> build/lib/genometreetk/markers
2020-03-13T16:08:08   copying genometreetk/markers/__init__.py -> build/lib/genometreetk/markers
2020-03-13T16:08:08   copying genometreetk/markers/align_markers.py -> build/lib/genometreetk/markers
2020-03-13T16:08:08   copying genometreetk/VERSION -> build/lib/genometreetk
2020-03-13T16:08:08   running build_scripts
2020-03-13T16:08:08   creating build/scripts-3.5
2020-03-13T16:08:08   copying and adjusting bin/genometreetk -> build/scripts-3.5
2020-03-13T16:08:08   changing mode of build/scripts-3.5/genometreetk from 644 to 755
2020-03-13T16:08:08   installing to build/bdist.linux-armv7l/wheel
2020-03-13T16:08:08   running install
2020-03-13T16:08:08   running install_lib
2020-03-13T16:08:08   creating build/bdist.linux-armv7l
2020-03-13T16:08:08   creating build/bdist.linux-armv7l/wheel
2020-03-13T16:08:08   creating build/bdist.linux-armv7l/wheel/genometreetk
2020-03-13T16:08:08   copying build/lib/genometreetk/tree_support.py -> build/bdist.linux-armv7l/wheel/genometreetk
2020-03-13T16:08:08   copying build/lib/genometreetk/exceptions.py -> build/bdist.linux-armv7l/wheel/genometreetk
2020-03-13T16:08:08   copying build/lib/genometreetk/jackknife_markers.py -> build/bdist.linux-armv7l/wheel/genometreetk
2020-03-13T16:08:08   copying build/lib/genometreetk/infer_workflow.py -> build/bdist.linux-armv7l/wheel/genometreetk
2020-03-13T16:08:08   creating build/bdist.linux-armv7l/wheel/genometreetk/markers
2020-03-13T16:08:08   copying build/lib/genometreetk/markers/infer_markers.py -> build/bdist.linux-armv7l/wheel/genometreetk/markers
2020-03-13T16:08:08   copying build/lib/genometreetk/markers/lgt_test.py -> build/bdist.linux-armv7l/wheel/genometreetk/markers
2020-03-13T16:08:08   copying build/lib/genometreetk/markers/__init__.py -> build/bdist.linux-armv7l/wheel/genometreetk/markers
2020-03-13T16:08:08   copying build/lib/genometreetk/markers/align_markers.py -> build/bdist.linux-armv7l/wheel/genometreetk/markers
2020-03-13T16:08:08   copying build/lib/genometreetk/bootstrap.py -> build/bdist.linux-armv7l/wheel/genometreetk
2020-03-13T16:08:08   copying build/lib/genometreetk/phylogenetic_diversity.py -> build/bdist.linux-armv7l/wheel/genometreetk
2020-03-13T16:08:08   copying build/lib/genometreetk/rna_workflow.py -> build/bdist.linux-armv7l/wheel/genometreetk
2020-03-13T16:08:08   copying build/lib/genometreetk/VERSION -> build/bdist.linux-armv7l/wheel/genometreetk
2020-03-13T16:08:08   copying build/lib/genometreetk/reroot_tree.py -> build/bdist.linux-armv7l/wheel/genometreetk
2020-03-13T16:08:08   copying build/lib/genometreetk/derep_tree.py -> build/bdist.linux-armv7l/wheel/genometreetk
2020-03-13T16:08:08   copying build/lib/genometreetk/jackknife_taxa.py -> build/bdist.linux-armv7l/wheel/genometreetk
2020-03-13T16:08:08   copying build/lib/genometreetk/__init__.py -> build/bdist.linux-armv7l/wheel/genometreetk
2020-03-13T16:08:08   copying build/lib/genometreetk/main.py -> build/bdist.linux-armv7l/wheel/genometreetk
2020-03-13T16:08:08   copying build/lib/genometreetk/default_values.py -> build/bdist.linux-armv7l/wheel/genometreetk
2020-03-13T16:08:08   copying build/lib/genometreetk/combine_support.py -> build/bdist.linux-armv7l/wheel/genometreetk
2020-03-13T16:08:08   copying build/lib/genometreetk/arb.py -> build/bdist.linux-armv7l/wheel/genometreetk
2020-03-13T16:08:08   copying build/lib/genometreetk/aai.py -> build/bdist.linux-armv7l/wheel/genometreetk
2020-03-13T16:08:08   copying build/lib/genometreetk/ncbi.py -> build/bdist.linux-armv7l/wheel/genometreetk
2020-03-13T16:08:08   copying build/lib/genometreetk/common.py -> build/bdist.linux-armv7l/wheel/genometreetk
2020-03-13T16:08:08   running install_egg_info
2020-03-13T16:08:08   running egg_info
2020-03-13T16:08:08   creating GenomeTreeTk.egg-info
2020-03-13T16:08:08   writing top-level names to GenomeTreeTk.egg-info/top_level.txt
2020-03-13T16:08:08   writing dependency_links to GenomeTreeTk.egg-info/dependency_links.txt
2020-03-13T16:08:08   writing GenomeTreeTk.egg-info/PKG-INFO
2020-03-13T16:08:08   writing requirements to GenomeTreeTk.egg-info/requires.txt
2020-03-13T16:08:08   writing manifest file 'GenomeTreeTk.egg-info/SOURCES.txt'
2020-03-13T16:08:08   reading manifest file 'GenomeTreeTk.egg-info/SOURCES.txt'
2020-03-13T16:08:08   writing manifest file 'GenomeTreeTk.egg-info/SOURCES.txt'
2020-03-13T16:08:08   Copying GenomeTreeTk.egg-info to build/bdist.linux-armv7l/wheel/GenomeTreeTk-0.1.0-py3.5.egg-info
2020-03-13T16:08:08   running install_scripts
2020-03-13T16:08:08   creating build/bdist.linux-armv7l/wheel/GenomeTreeTk-0.1.0.data
2020-03-13T16:08:08   creating build/bdist.linux-armv7l/wheel/GenomeTreeTk-0.1.0.data/scripts
2020-03-13T16:08:08   copying build/scripts-3.5/genometreetk -> build/bdist.linux-armv7l/wheel/GenomeTreeTk-0.1.0.data/scripts
2020-03-13T16:08:08   changing mode of build/bdist.linux-armv7l/wheel/GenomeTreeTk-0.1.0.data/scripts/genometreetk to 755
2020-03-13T16:08:09   creating build/bdist.linux-armv7l/wheel/GenomeTreeTk-0.1.0.dist-info/WHEEL
2020-03-13T16:08:09   Building wheel for GenomeTreeTk (setup.py): finished with status 'done'
2020-03-13T16:08:09   Stored in directory: /tmp/tmpc_wnuah2
2020-03-13T16:08:09 Successfully built GenomeTreeTk
2020-03-13T16:08:09 Cleaning up...
2020-03-13T16:08:09   Removing source in /tmp/pip-wheel-wfzr68dn/GenomeTreeTk
2020-03-13T16:08:09 Removed build tracker '/tmp/pip-req-tracker-wk028kaa'