Created temporary directory: /tmp/pip-ephem-wheel-cache-9b2ytflm Created temporary directory: /tmp/pip-req-tracker-79p2js3u Created requirements tracker '/tmp/pip-req-tracker-79p2js3u' Created temporary directory: /tmp/pip-wheel-twuubecb Collecting rna-tools==3.1.1 1 location(s) to search for versions of rna-tools: * https://pypi.org/simple/rna-tools/ Getting page https://pypi.org/simple/rna-tools/ Analyzing links from page https://pypi.org/simple/rna-tools/ Found link https://files.pythonhosted.org/packages/4e/b0/7b809484967fa28b258a2b68c30d7bec5888457b012992c55f76758818e0/rna-tools-3.1.1.tar.gz#sha256=82fe7a42f08a129a902740ac59400f495028144f37b74751b714ab90bdf87abd (from https://pypi.org/simple/rna-tools/), version: 3.1.1 Using version 3.1.1 (newest of versions: 3.1.1) Created temporary directory: /tmp/pip-unpack-q258uwk1 Downloading https://files.pythonhosted.org/packages/4e/b0/7b809484967fa28b258a2b68c30d7bec5888457b012992c55f76758818e0/rna-tools-3.1.1.tar.gz (199kB) Downloading from URL https://files.pythonhosted.org/packages/4e/b0/7b809484967fa28b258a2b68c30d7bec5888457b012992c55f76758818e0/rna-tools-3.1.1.tar.gz#sha256=82fe7a42f08a129a902740ac59400f495028144f37b74751b714ab90bdf87abd (from https://pypi.org/simple/rna-tools/) Added rna-tools==3.1.1 from https://files.pythonhosted.org/packages/4e/b0/7b809484967fa28b258a2b68c30d7bec5888457b012992c55f76758818e0/rna-tools-3.1.1.tar.gz#sha256=82fe7a42f08a129a902740ac59400f495028144f37b74751b714ab90bdf87abd to build tracker '/tmp/pip-req-tracker-79p2js3u' Running setup.py (path:/tmp/pip-wheel-twuubecb/rna-tools/setup.py) egg_info for package rna-tools Running command python setup.py egg_info WARNING: '' not a valid package name; please use only .-separated package names in setup.py running egg_info creating pip-egg-info/rna_tools.egg-info writing dependency_links to pip-egg-info/rna_tools.egg-info/dependency_links.txt writing pip-egg-info/rna_tools.egg-info/PKG-INFO writing top-level names to pip-egg-info/rna_tools.egg-info/top_level.txt writing manifest file 'pip-egg-info/rna_tools.egg-info/SOURCES.txt' reading manifest file 'pip-egg-info/rna_tools.egg-info/SOURCES.txt' writing manifest file 'pip-egg-info/rna_tools.egg-info/SOURCES.txt' Source in /tmp/pip-wheel-twuubecb/rna-tools has version 3.1.1, which satisfies requirement rna-tools==3.1.1 from https://files.pythonhosted.org/packages/4e/b0/7b809484967fa28b258a2b68c30d7bec5888457b012992c55f76758818e0/rna-tools-3.1.1.tar.gz#sha256=82fe7a42f08a129a902740ac59400f495028144f37b74751b714ab90bdf87abd Removed rna-tools==3.1.1 from https://files.pythonhosted.org/packages/4e/b0/7b809484967fa28b258a2b68c30d7bec5888457b012992c55f76758818e0/rna-tools-3.1.1.tar.gz#sha256=82fe7a42f08a129a902740ac59400f495028144f37b74751b714ab90bdf87abd from build tracker '/tmp/pip-req-tracker-79p2js3u' Building wheels for collected packages: rna-tools Created temporary directory: /tmp/pip-wheel-0qc0b54e Running setup.py bdist_wheel for rna-tools: started Destination directory: /tmp/pip-wheel-0qc0b54e Running command /usr/bin/python3 -u -c "import setuptools, tokenize;__file__='/tmp/pip-wheel-twuubecb/rna-tools/setup.py';f=getattr(tokenize, 'open', open)(__file__);code=f.read().replace('\r\n', '\n');f.close();exec(compile(code, __file__, 'exec'))" bdist_wheel -d /tmp/pip-wheel-0qc0b54e WARNING: '' not a valid package name; please use only .-separated package names in setup.py running bdist_wheel running build running build_py creating build creating build/lib copying setup.py -> build/lib copying __init__.py -> build/lib copying test.py -> build/lib creating build/lib/rna_tools copying rna_tools/rna_tools_config.py -> build/lib/rna_tools copying rna_tools/rna_secondary_structure_prediction.py -> build/lib/rna_tools copying rna_tools/rna_pdb_toolsx.py -> build/lib/rna_tools copying rna_tools/update_readme.py -> build/lib/rna_tools copying rna_tools/rna_tools_test_all.py -> build/lib/rna_tools copying rna_tools/rna_tools_lib.py -> build/lib/rna_tools copying rna_tools/rna_dot2ct.py -> build/lib/rna_tools copying rna_tools/Seq.py -> build/lib/rna_tools copying rna_tools/SecondaryStructure.py -> build/lib/rna_tools copying rna_tools/rna_calc_fenergy.py -> build/lib/rna_tools copying rna_tools/__init__.py -> build/lib/rna_tools copying rna_tools/RfamSearch.py -> build/lib/rna_tools copying rna_tools/BlastPDB.py -> build/lib/rna_tools copying rna_tools/rna_tools_logging.py -> build/lib/rna_tools copying rna_tools/rna_simrnaweb_download_job.py -> build/lib/rna_tools copying rna_tools/rna_tools_config_local.py -> build/lib/rna_tools creating build/lib/rna_tools/tools copying rna_tools/tools/__init__.py -> build/lib/rna_tools/tools creating build/lib/rna_tools/tools/misc copying rna_tools/tools/misc/rna_add_chain.py -> build/lib/rna_tools/tools/misc copying rna_tools/tools/misc/reverse.py -> build/lib/rna_tools/tools/misc copying rna_tools/tools/misc/translate.py -> build/lib/rna_tools/tools/misc copying rna_tools/tools/misc/__init__.py -> build/lib/rna_tools/tools/misc copying rna_tools/tools/misc/rna_merge_dfs.py -> build/lib/rna_tools/tools/misc copying rna_tools/tools/misc/rna_mq_exp.py -> build/lib/rna_tools/tools/misc copying rna_tools/tools/misc/rna_mq_plot.py -> build/lib/rna_tools/tools/misc creating build/lib/rna_tools/tools/rna_bp copying rna_tools/tools/rna_bp/base_pair.py -> build/lib/rna_tools/tools/rna_bp copying rna_tools/tools/rna_bp/__init__.py -> build/lib/rna_tools/tools/rna_bp creating build/lib/rna_tools/tools/diffpdb copying rna_tools/tools/diffpdb/diffpdb.py -> build/lib/rna_tools/tools/diffpdb copying rna_tools/tools/diffpdb/__init__.py -> build/lib/rna_tools/tools/diffpdb creating build/lib/rna_tools/tools/clanstix copying rna_tools/tools/clanstix/rna_clanstix_v1..py -> build/lib/rna_tools/tools/clanstix copying rna_tools/tools/clanstix/rna_clanstix_parallel_map.py -> build/lib/rna_tools/tools/clanstix copying rna_tools/tools/clanstix/rna_clanstix.py -> build/lib/rna_tools/tools/clanstix copying rna_tools/tools/clanstix/__init__.py -> build/lib/rna_tools/tools/clanstix creating build/lib/rna_tools/tools/plotting copying rna_tools/tools/plotting/rna_plot_density.py -> build/lib/rna_tools/tools/plotting copying rna_tools/tools/plotting/rna_plot_hist.py -> build/lib/rna_tools/tools/plotting copying rna_tools/tools/plotting/__init__.py -> build/lib/rna_tools/tools/plotting creating build/lib/rna_tools/tools/ClashCalc copying rna_tools/tools/ClashCalc/__init__.py -> build/lib/rna_tools/tools/ClashCalc copying rna_tools/tools/ClashCalc/ClashCalc.py -> build/lib/rna_tools/tools/ClashCalc creating build/lib/rna_tools/tools/PyMOL4RNA copying rna_tools/tools/PyMOL4RNA/code_for_color_spl.py -> build/lib/rna_tools/tools/PyMOL4RNA copying rna_tools/tools/PyMOL4RNA/external_flatten_object.py -> build/lib/rna_tools/tools/PyMOL4RNA copying rna_tools/tools/PyMOL4RNA/code_for_color_spl_objects.py -> build/lib/rna_tools/tools/PyMOL4RNA copying rna_tools/tools/PyMOL4RNA/PyMOL4RNA.py -> build/lib/rna_tools/tools/PyMOL4RNA copying rna_tools/tools/PyMOL4RNA/__init__.py -> build/lib/rna_tools/tools/PyMOL4RNA copying rna_tools/tools/PyMOL4RNA/code_for_spl.py -> build/lib/rna_tools/tools/PyMOL4RNA copying rna_tools/tools/PyMOL4RNA/Spliceosome_PyMOL.py -> build/lib/rna_tools/tools/PyMOL4RNA copying rna_tools/tools/PyMOL4RNA/pymol_daslab.py -> build/lib/rna_tools/tools/PyMOL4RNA creating build/lib/rna_tools/tools/rna_x3dna copying rna_tools/tools/rna_x3dna/rna_x3dna_config.py -> build/lib/rna_tools/tools/rna_x3dna copying rna_tools/tools/rna_x3dna/rna_x3dna_config_local.py -> build/lib/rna_tools/tools/rna_x3dna copying rna_tools/tools/rna_x3dna/rna_x3dna_config_local_sample.py -> build/lib/rna_tools/tools/rna_x3dna copying rna_tools/tools/rna_x3dna/__init__.py -> build/lib/rna_tools/tools/rna_x3dna copying rna_tools/tools/rna_x3dna/rna_x3dna.py -> build/lib/rna_tools/tools/rna_x3dna creating build/lib/rna_tools/tools/clarna_app copying rna_tools/tools/clarna_app/clarna_app.py -> build/lib/rna_tools/tools/clarna_app copying rna_tools/tools/clarna_app/__init__.py -> build/lib/rna_tools/tools/clarna_app copying rna_tools/tools/clarna_app/test.py -> build/lib/rna_tools/tools/clarna_app creating build/lib/rna_tools/tools/rna_filter copying rna_tools/tools/rna_filter/rna_pairs2rfilter.py -> build/lib/rna_tools/tools/rna_filter copying rna_tools/tools/rna_filter/rna_get_dists.py -> build/lib/rna_tools/tools/rna_filter copying rna_tools/tools/rna_filter/rna_dca_mapping.py -> build/lib/rna_tools/tools/rna_filter copying rna_tools/tools/rna_filter/rna_pairs_diff.py -> build/lib/rna_tools/tools/rna_filter copying rna_tools/tools/rna_filter/rna_restrs2mqapRNA.py -> build/lib/rna_tools/tools/rna_filter copying rna_tools/tools/rna_filter/rna_ec2x.py -> build/lib/rna_tools/tools/rna_filter copying rna_tools/tools/rna_filter/rna_restrs2SimRNArestrs.py -> build/lib/rna_tools/tools/rna_filter copying rna_tools/tools/rna_filter/simrna_get_restraints.py -> build/lib/rna_tools/tools/rna_filter copying rna_tools/tools/rna_filter/rna_csv2pairs.py -> build/lib/rna_tools/tools/rna_filter copying rna_tools/tools/rna_filter/test_rna_filter.py -> build/lib/rna_tools/tools/rna_filter copying rna_tools/tools/rna_filter/__init__.py -> build/lib/rna_tools/tools/rna_filter copying rna_tools/tools/rna_filter/rna_get_distances.py -> build/lib/rna_tools/tools/rna_filter copying rna_tools/tools/rna_filter/rna_pairs2SimRNArestrs.py -> build/lib/rna_tools/tools/rna_filter copying rna_tools/tools/rna_filter/rna_ss_get_bps.py -> build/lib/rna_tools/tools/rna_filter copying rna_tools/tools/rna_filter/rna_filter.py -> build/lib/rna_tools/tools/rna_filter copying rna_tools/tools/rna_filter/pymol_dists.py -> build/lib/rna_tools/tools/rna_filter copying rna_tools/tools/rna_filter/rna_dca_select_interactions.py -> build/lib/rna_tools/tools/rna_filter creating build/lib/rna_tools/tools/rna_prediction_significance copying rna_tools/tools/rna_prediction_significance/rna_prediction_significance.py -> build/lib/rna_tools/tools/rna_prediction_significance copying rna_tools/tools/rna_prediction_significance/__init__.py -> build/lib/rna_tools/tools/rna_prediction_significance creating build/lib/rna_tools/tools/rna_rosetta copying rna_tools/tools/rna_rosetta/rna_rosetta_extract_lowscore_decoys.py -> build/lib/rna_tools/tools/rna_rosetta copying rna_tools/tools/rna_rosetta/rna_rosetta_n.py -> build/lib/rna_tools/tools/rna_rosetta copying rna_tools/tools/rna_rosetta/rna_rosetta_min.py -> build/lib/rna_tools/tools/rna_rosetta copying rna_tools/tools/rna_rosetta/rna_rosetta_head.py -> build/lib/rna_tools/tools/rna_rosetta copying rna_tools/tools/rna_rosetta/rna_rosetta_easy_cat.py -> build/lib/rna_tools/tools/rna_rosetta copying rna_tools/tools/rna_rosetta/rna_rosetta_run.py -> build/lib/rna_tools/tools/rna_rosetta copying rna_tools/tools/rna_rosetta/rna_rosetta_check_progress.py -> build/lib/rna_tools/tools/rna_rosetta copying rna_tools/tools/rna_rosetta/__init__.py -> build/lib/rna_tools/tools/rna_rosetta copying rna_tools/tools/rna_rosetta/rna_rosetta_copy_job_sandbox.py -> build/lib/rna_tools/tools/rna_rosetta copying rna_tools/tools/rna_rosetta/test.py -> build/lib/rna_tools/tools/rna_rosetta copying rna_tools/tools/rna_rosetta/rna_rosetta_cluster.py -> build/lib/rna_tools/tools/rna_rosetta creating build/lib/rna_tools/tools/rnakb_utils copying rna_tools/tools/rnakb_utils/rnakb_utils.py -> build/lib/rna_tools/tools/rnakb_utils copying rna_tools/tools/rnakb_utils/rnakb_utils_test.py -> build/lib/rna_tools/tools/rnakb_utils copying rna_tools/tools/rnakb_utils/__init__.py -> build/lib/rna_tools/tools/rnakb_utils copying rna_tools/tools/rnakb_utils/test.py -> build/lib/rna_tools/tools/rnakb_utils creating build/lib/rna_tools/tools/cluster_load copying rna_tools/tools/cluster_load/cluster_mini_free.py -> build/lib/rna_tools/tools/cluster_load copying rna_tools/tools/cluster_load/cluster_load.py -> build/lib/rna_tools/tools/cluster_load copying rna_tools/tools/cluster_load/__init__.py -> build/lib/rna_tools/tools/cluster_load creating build/lib/rna_tools/tools/pdb_formatix copying rna_tools/tools/pdb_formatix/test-quick-and-dirty.py -> build/lib/rna_tools/tools/pdb_formatix copying rna_tools/tools/pdb_formatix/RosettaUtils.py -> build/lib/rna_tools/tools/pdb_formatix copying rna_tools/tools/pdb_formatix/PDBFile.py -> build/lib/rna_tools/tools/pdb_formatix copying rna_tools/tools/pdb_formatix/rebuilder.py -> build/lib/rna_tools/tools/pdb_formatix copying rna_tools/tools/pdb_formatix/__init__.py -> build/lib/rna_tools/tools/pdb_formatix copying rna_tools/tools/pdb_formatix/SingleLineUtils.py -> build/lib/rna_tools/tools/pdb_formatix creating build/lib/rna_tools/tools/pdb_formatix/test copying rna_tools/tools/pdb_formatix/test/__init__.py -> build/lib/rna_tools/tools/pdb_formatix/test copying rna_tools/tools/pdb_formatix/test/test.py -> build/lib/rna_tools/tools/pdb_formatix/test creating build/lib/rna_tools/tools/rna_calc_inf copying rna_tools/tools/rna_calc_inf/rna_calc_dinf.py -> build/lib/rna_tools/tools/rna_calc_inf copying rna_tools/tools/rna_calc_inf/rna_calc_inf.py -> build/lib/rna_tools/tools/rna_calc_inf copying rna_tools/tools/rna_calc_inf/__init__.py -> build/lib/rna_tools/tools/rna_calc_inf creating build/lib/rna_tools/tools/pymol_drawing copying rna_tools/tools/pymol_drawing/__init__.py -> build/lib/rna_tools/tools/pymol_drawing copying rna_tools/tools/pymol_drawing/pymol_drawing.py -> build/lib/rna_tools/tools/pymol_drawing creating build/lib/rna_tools/tools/rna_alignment copying rna_tools/tools/rna_alignment/bucket.py -> build/lib/rna_tools/tools/rna_alignment copying rna_tools/tools/rna_alignment/rna_alignment.py -> build/lib/rna_tools/tools/rna_alignment copying rna_tools/tools/rna_alignment/rna_align_distance_to_seq.py -> build/lib/rna_tools/tools/rna_alignment copying rna_tools/tools/rna_alignment/test_rnaseq.py -> build/lib/rna_tools/tools/rna_alignment copying rna_tools/tools/rna_alignment/rna_align_find_core.py -> build/lib/rna_tools/tools/rna_alignment copying rna_tools/tools/rna_alignment/rna_alignment_r2r.py -> build/lib/rna_tools/tools/rna_alignment copying rna_tools/tools/rna_alignment/rna_align_seq_to_alignment.py -> build/lib/rna_tools/tools/rna_alignment copying rna_tools/tools/rna_alignment/rna_align_foldability.py -> build/lib/rna_tools/tools/rna_alignment copying rna_tools/tools/rna_alignment/rna_align_get_ss_from_fasta.py -> build/lib/rna_tools/tools/rna_alignment copying rna_tools/tools/rna_alignment/rna_align_get_ss_from_stk.py -> build/lib/rna_tools/tools/rna_alignment copying rna_tools/tools/rna_alignment/__init__.py -> build/lib/rna_tools/tools/rna_alignment copying rna_tools/tools/rna_alignment/test_rna_alignment.py -> build/lib/rna_tools/tools/rna_alignment copying rna_tools/tools/rna_alignment/test.py -> build/lib/rna_tools/tools/rna_alignment copying rna_tools/tools/rna_alignment/random_assignment_of_nucleotides.py -> build/lib/rna_tools/tools/rna_alignment copying rna_tools/tools/rna_alignment/rna_align_find_seq_in_alignment.py -> build/lib/rna_tools/tools/rna_alignment creating build/lib/rna_tools/tools/rna_calc_rmsd copying rna_tools/tools/rna_calc_rmsd/rna_calc_rmsd_multi_targets.py -> build/lib/rna_tools/tools/rna_calc_rmsd copying rna_tools/tools/rna_calc_rmsd/rna_calc_rmsd.py -> build/lib/rna_tools/tools/rna_calc_rmsd copying rna_tools/tools/rna_calc_rmsd/rna_calc_rmsd_all_vs_all.py -> build/lib/rna_tools/tools/rna_calc_rmsd copying rna_tools/tools/rna_calc_rmsd/__init__.py -> build/lib/rna_tools/tools/rna_calc_rmsd creating build/lib/rna_tools/tools/rna_calc_rmsd/lib copying rna_tools/tools/rna_calc_rmsd/lib/__init__.py -> build/lib/rna_tools/tools/rna_calc_rmsd/lib creating build/lib/rna_tools/tools/rna_calc_rmsd/lib/rmsd copying rna_tools/tools/rna_calc_rmsd/lib/rmsd/calculate_rmsd.py -> build/lib/rna_tools/tools/rna_calc_rmsd/lib/rmsd copying rna_tools/tools/rna_calc_rmsd/lib/rmsd/calculate_rmsd_trytofixselection.py -> build/lib/rna_tools/tools/rna_calc_rmsd/lib/rmsd copying rna_tools/tools/rna_calc_rmsd/lib/rmsd/__init__.py -> build/lib/rna_tools/tools/rna_calc_rmsd/lib/rmsd creating build/lib/rna_tools/tools/rna_helix_vis copying rna_tools/tools/rna_helix_vis/rna_helix_vis.py -> build/lib/rna_tools/tools/rna_helix_vis copying rna_tools/tools/rna_helix_vis/__init__.py -> build/lib/rna_tools/tools/rna_helix_vis creating build/lib/rna_tools/tools/rna_refinement copying rna_tools/tools/rna_refinement/__init__.py -> build/lib/rna_tools/tools/rna_refinement copying rna_tools/tools/rna_refinement/rna_refinement.py -> build/lib/rna_tools/tools/rna_refinement creating build/lib/rna_tools/tools/extra_functions copying rna_tools/tools/extra_functions/gen_numbering.py -> build/lib/rna_tools/tools/extra_functions copying rna_tools/tools/extra_functions/__init__.py -> build/lib/rna_tools/tools/extra_functions copying rna_tools/tools/extra_functions/select_fragment.py -> build/lib/rna_tools/tools/extra_functions creating build/lib/rna_tools/tools/renum_pdb_to_aln copying rna_tools/tools/renum_pdb_to_aln/__init__.py -> build/lib/rna_tools/tools/renum_pdb_to_aln copying rna_tools/tools/renum_pdb_to_aln/renum_pdb_to_aln.py -> build/lib/rna_tools/tools/renum_pdb_to_aln creating build/lib/rna_tools/tools/rna_calc_evo_rmsd copying rna_tools/tools/rna_calc_evo_rmsd/rna_calc_evo_rmsd.py -> build/lib/rna_tools/tools/rna_calc_evo_rmsd copying rna_tools/tools/rna_calc_evo_rmsd/__init__.py -> build/lib/rna_tools/tools/rna_calc_evo_rmsd copying rna_tools/tools/rna_calc_evo_rmsd/RNAalignment.py -> build/lib/rna_tools/tools/rna_calc_evo_rmsd copying rna_tools/tools/rna_calc_evo_rmsd/RNAmodel.py -> build/lib/rna_tools/tools/rna_calc_evo_rmsd creating build/lib/rna_tools/tools/simrna_trajectory copying rna_tools/tools/simrna_trajectory/test_rna_simrna.py -> build/lib/rna_tools/tools/simrna_trajectory copying rna_tools/tools/simrna_trajectory/rna_simrna_cluster.py -> build/lib/rna_tools/tools/simrna_trajectory copying rna_tools/tools/simrna_trajectory/rna_simrna_energy_plot.py -> build/lib/rna_tools/tools/simrna_trajectory copying rna_tools/tools/simrna_trajectory/rna_simrna_extract.py -> build/lib/rna_tools/tools/simrna_trajectory copying rna_tools/tools/simrna_trajectory/__init__.py -> build/lib/rna_tools/tools/simrna_trajectory copying rna_tools/tools/simrna_trajectory/rna_simrna_subset.py -> build/lib/rna_tools/tools/simrna_trajectory copying rna_tools/tools/simrna_trajectory/simrna_trajectory.py -> build/lib/rna_tools/tools/simrna_trajectory copying rna_tools/tools/simrna_trajectory/rna_simrna_lowest.py -> build/lib/rna_tools/tools/simrna_trajectory creating build/lib/rna_tools/tools/rna_calc_rmsd_trafl copying rna_tools/tools/rna_calc_rmsd_trafl/rna_calc_rmsd_trafl.py -> build/lib/rna_tools/tools/rna_calc_rmsd_trafl copying rna_tools/tools/rna_calc_rmsd_trafl/rna_cal_rmsd_trafl_plot.py -> build/lib/rna_tools/tools/rna_calc_rmsd_trafl copying rna_tools/tools/rna_calc_rmsd_trafl/__init__.py -> build/lib/rna_tools/tools/rna_calc_rmsd_trafl copying rna_tools/tools/rna_calc_rmsd_trafl/config_local.py -> build/lib/rna_tools/tools/rna_calc_rmsd_trafl creating build/lib/rna_tools/tools/rna_sali2dotbracket copying rna_tools/tools/rna_sali2dotbracket/__init__.py -> build/lib/rna_tools/tools/rna_sali2dotbracket copying rna_tools/tools/rna_sali2dotbracket/rna_sali2dotbracket.py -> build/lib/rna_tools/tools/rna_sali2dotbracket creating build/lib/rna_tools/tools/pdbs_measure_atom_dists copying rna_tools/tools/pdbs_measure_atom_dists/pdbs_measure_atom_dists.py -> build/lib/rna_tools/tools/pdbs_measure_atom_dists copying rna_tools/tools/pdbs_measure_atom_dists/__init__.py -> build/lib/rna_tools/tools/pdbs_measure_atom_dists creating build/lib/rna_tools/tools/rna_convert_pseudoknot_formats copying rna_tools/tools/rna_convert_pseudoknot_formats/__init__.py -> build/lib/rna_tools/tools/rna_convert_pseudoknot_formats copying rna_tools/tools/rna_convert_pseudoknot_formats/rna_pk_simrna_to_one_line.py -> build/lib/rna_tools/tools/rna_convert_pseudoknot_formats copying rna_tools/tools/rna_convert_pseudoknot_formats/rna_ss_pk_to_simrna.py -> build/lib/rna_tools/tools/rna_convert_pseudoknot_formats creating build/lib/rna_tools/tools/rna_pdb_edit_occupancy_bfactor copying rna_tools/tools/rna_pdb_edit_occupancy_bfactor/rna_pdb_edit_occupancy_bfactor_flymake.py -> build/lib/rna_tools/tools/rna_pdb_edit_occupancy_bfactor copying rna_tools/tools/rna_pdb_edit_occupancy_bfactor/__init__.py -> build/lib/rna_tools/tools/rna_pdb_edit_occupancy_bfactor copying rna_tools/tools/rna_pdb_edit_occupancy_bfactor/rna_pdb_edit_occupancy_bfactor.py -> build/lib/rna_tools/tools/rna_pdb_edit_occupancy_bfactor creating build/lib/rna_tools/tools/rna_pdb_merge_structure_with_fragments copying rna_tools/tools/rna_pdb_merge_structure_with_fragments/rna_pdb_merge_structure_with_fragments.py -> build/lib/rna_tools/tools/rna_pdb_merge_structure_with_fragments copying rna_tools/tools/rna_pdb_merge_structure_with_fragments/__init__.py -> build/lib/rna_tools/tools/rna_pdb_merge_structure_with_fragments running build_scripts creating build/scripts-3.4 copying and adjusting rna_tools/rna_pdb_toolsx.py -> build/scripts-3.4 copying and adjusting rna_tools/tools/rna_calc_rmsd/rna_calc_rmsd.py -> build/scripts-3.4 copying and adjusting rna_tools/tools/rna_calc_rmsd/rna_calc_rmsd_all_vs_all.py -> build/scripts-3.4 copying and adjusting rna_tools/tools/diffpdb/diffpdb.py -> build/scripts-3.4 copying and adjusting rna_tools/tools/clanstix/rna_clanstix.py -> build/scripts-3.4 copying and adjusting rna_tools/rna_dot2ct.py -> build/scripts-3.4 copying and adjusting rna_tools/rna_secondary_structure_prediction.py -> build/scripts-3.4 copying and adjusting rna_tools/tools/rna_prediction_significance/rna_prediction_significance.py -> build/scripts-3.4 copying and adjusting rna_tools/tools/rna_multimodels/rna_pdb_merge_into_one.py -> build/scripts-3.4 copying and adjusting rna_tools/tools/rna_calc_inf/rna_calc_inf.py -> build/scripts-3.4 copying and adjusting rna_tools/tools/rna_convert_pseudoknot_formats/rna_pk_simrna_to_one_line.py -> build/scripts-3.4 copying and adjusting rna_tools/tools/clarna_app/clarna_app.py -> build/scripts-3.4 copying and adjusting rna_tools/tools/rna_helix_vis/rna_helix_vis.py -> build/scripts-3.4 copying and adjusting rna_tools/tools/misc/rna_add_chain.py -> build/scripts-3.4 copying and adjusting rna_tools/tools/rna_sali2dotbracket/rna_sali2dotbracket.py -> build/scripts-3.4 copying and adjusting rna_tools/tools/rna_rosetta/rna_rosetta_run.py -> build/scripts-3.4 copying and adjusting rna_tools/tools/rna_rosetta/rna_rosetta_cluster.py -> build/scripts-3.4 copying and adjusting rna_tools/tools/rna_rosetta/rna_rosetta_min.py -> build/scripts-3.4 copying and adjusting rna_tools/tools/rna_rosetta/rna_rosetta_n.py -> build/scripts-3.4 copying and adjusting rna_tools/tools/rna_rosetta/rna_rosetta_extract_lowscore_decoys.py -> build/scripts-3.4 copying and adjusting rna_tools/tools/rna_rosetta/rna_rosetta_check_progress.py -> build/scripts-3.4 copying and adjusting rna_tools/tools/rna_rosetta/rna_rosetta_head.py -> build/scripts-3.4 copying and adjusting rna_tools/tools/simrna_trajectory/rna_simrna_lowest.py -> build/scripts-3.4 copying and adjusting rna_tools/tools/simrna_trajectory/rna_simrna_extract.py -> build/scripts-3.4 copying and adjusting rna_tools/tools/simrna_trajectory/rna_simrna_cluster.py -> build/scripts-3.4 copying and adjusting rna_tools/tools/plotting/rna_plot_hist.py -> build/scripts-3.4 copying and adjusting rna_tools/tools/plotting/rna_plot_density.py -> build/scripts-3.4 copying and adjusting rna_tools/tools/simrna_trajectory/rna_simrna_lowest.py -> build/scripts-3.4 copying and adjusting rna_tools/tools/simrna_trajectory/rna_simrna_extract.py -> build/scripts-3.4 copying and adjusting rna_tools/tools/simrna_trajectory/rna_simrna_cluster.py -> build/scripts-3.4 copying and adjusting rna_tools/tools/rna_filter/rna_filter.py -> build/scripts-3.4 copying and adjusting rna_tools/tools/rna_filter/rna_ec2x.py -> build/scripts-3.4 copying and adjusting rna_tools/tools/rna_filter/rna_pairs2SimRNArestrs.py -> build/scripts-3.4 copying and adjusting rna_tools/tools/rna_filter/rna_ss_get_bps.py -> build/scripts-3.4 copying and adjusting rna_tools/tools/rna_filter/rna_pairs_diff.py -> build/scripts-3.4 copying and adjusting rna_tools/tools/rna_alignment/rna_align_seq_to_alignment.py -> build/scripts-3.4 copying and adjusting rna_tools/tools/rna_alignment/rna_align_find_core.py -> build/scripts-3.4 copying and adjusting rna_tools/tools/rna_alignment/rna_align_get_ss_from_stk.py -> build/scripts-3.4 copying and adjusting rna_tools/tools/rna_alignment/rna_align_seq_to_alignment.py -> build/scripts-3.4 copying and adjusting rna_tools/tools/rna_alignment/utils/rna_alignment_get_species.py -> build/scripts-3.4 copying and adjusting rna_tools/tools/rna_alignment/utils/rna_alignment_process_id.py -> build/scripts-3.4 copying and adjusting rna_tools/tools/rna_alignment/utils/rna_alignment_r2r.py -> build/scripts-3.4 copying and adjusting rna_tools/tools/rna_alignment/rna_align_find_seq_in_alignment.py -> build/scripts-3.4 copying and adjusting rna_tools/tools/rna_alignment/rna_align_foldability.py -> build/scripts-3.4 copying and adjusting rna_tools/tools/rna_pdb_edit_occupancy_bfactor/rna_pdb_edit_occupancy_bfactor.py -> build/scripts-3.4 copying and adjusting rna_tools/tools/rna_refinement/rna_refinement.py -> build/scripts-3.4 copying and adjusting rna_tools/rna_simrnaweb_download_job.py -> build/scripts-3.4 copying and adjusting rna_tools/tools/rna_calc_evo_rmsd/rna_calc_evo_rmsd.py -> build/scripts-3.4 copying and adjusting rna_tools/tools/rna_calc_rmsd/rna_calc_rmsd_multi_targets.py -> build/scripts-3.4 copying and adjusting rna_tools/tools/rna_calc_rmsd_trafl/rna_calc_rmsd_trafl.py -> build/scripts-3.4 copying and adjusting rna_tools/tools/rna_calc_rmsd_trafl/rna_cal_rmsd_trafl_plot.py -> build/scripts-3.4 copying and adjusting rna_tools/tools/rna_x3dna/rna_x3dna.py -> build/scripts-3.4 copying and adjusting rna_tools/tools/renum_pdb_to_aln/renum_pdb_to_aln.py -> build/scripts-3.4 copying and adjusting rna_tools/tools/pdbs_measure_atom_dists/pdbs_measure_atom_dists.py -> build/scripts-3.4 copying and adjusting rna_tools/tools/rna_alignment/random_assignment_of_nucleotides.py -> build/scripts-3.4 copying and adjusting rna_tools/tools/rna_seq_search_BLASTn_outfmt-6/select_seq_fromBLAStn_6outfm.py -> build/scripts-3.4 copying and adjusting rna_tools/tools/pefx/pefx.py -> build/scripts-3.4 copying and adjusting rna_tools/tools/misc/translate.py -> build/scripts-3.4 copying and adjusting rna_tools/tools/misc/reverse.py -> build/scripts-3.4 copying and adjusting rna_tools/tools/misc/reverse.py -> build/scripts-3.4 copying and adjusting rna_tools/tools/rna_kd/rna_kd2pkd.py -> build/scripts-3.4 copying and adjusting rna_tools/tools/rna_kd/rna_pkd2kd.py -> build/scripts-3.4 copying and adjusting rna_tools/tools/pymol_color_by_conserv/pymol_color_by_conserv.py -> build/scripts-3.4 copying and adjusting rna_tools/tools/pymol_preview_generator/pymol_preview_generator.py -> build/scripts-3.4 changing mode of build/scripts-3.4/rna_pdb_toolsx.py from 644 to 755 changing mode of build/scripts-3.4/rna_calc_rmsd.py from 644 to 755 changing mode of build/scripts-3.4/rna_calc_rmsd_all_vs_all.py from 644 to 755 changing mode of build/scripts-3.4/diffpdb.py from 644 to 755 changing mode of build/scripts-3.4/rna_clanstix.py from 644 to 755 changing mode of build/scripts-3.4/rna_dot2ct.py from 644 to 755 changing mode of build/scripts-3.4/rna_secondary_structure_prediction.py from 644 to 755 changing mode of build/scripts-3.4/rna_prediction_significance.py from 644 to 755 changing mode of build/scripts-3.4/rna_pdb_merge_into_one.py from 644 to 755 changing mode of build/scripts-3.4/rna_calc_inf.py from 644 to 755 changing mode of build/scripts-3.4/rna_pk_simrna_to_one_line.py from 644 to 755 changing mode of build/scripts-3.4/clarna_app.py from 644 to 755 changing mode of build/scripts-3.4/rna_helix_vis.py from 644 to 755 changing mode of build/scripts-3.4/rna_add_chain.py from 644 to 755 changing mode of build/scripts-3.4/rna_sali2dotbracket.py from 644 to 755 changing mode of build/scripts-3.4/rna_rosetta_run.py from 644 to 755 changing mode of build/scripts-3.4/rna_rosetta_cluster.py from 644 to 755 changing mode of build/scripts-3.4/rna_rosetta_min.py from 644 to 755 changing mode of build/scripts-3.4/rna_rosetta_n.py from 644 to 755 changing mode of build/scripts-3.4/rna_rosetta_extract_lowscore_decoys.py from 644 to 755 changing mode of build/scripts-3.4/rna_rosetta_check_progress.py from 644 to 755 changing mode of build/scripts-3.4/rna_rosetta_head.py from 644 to 755 changing mode of build/scripts-3.4/rna_simrna_lowest.py from 644 to 755 changing mode of build/scripts-3.4/rna_simrna_extract.py from 644 to 755 changing mode of build/scripts-3.4/rna_simrna_cluster.py from 644 to 755 changing mode of build/scripts-3.4/rna_plot_hist.py from 644 to 755 changing mode of build/scripts-3.4/rna_plot_density.py from 644 to 755 changing mode of build/scripts-3.4/rna_filter.py from 644 to 755 changing mode of build/scripts-3.4/rna_ec2x.py from 644 to 755 changing mode of build/scripts-3.4/rna_pairs2SimRNArestrs.py from 644 to 755 changing mode of build/scripts-3.4/rna_ss_get_bps.py from 644 to 755 changing mode of build/scripts-3.4/rna_pairs_diff.py from 644 to 755 changing mode of build/scripts-3.4/rna_align_seq_to_alignment.py from 644 to 755 changing mode of build/scripts-3.4/rna_align_find_core.py from 644 to 755 changing mode of build/scripts-3.4/rna_align_get_ss_from_stk.py from 644 to 755 changing mode of build/scripts-3.4/rna_alignment_get_species.py from 644 to 755 changing mode of build/scripts-3.4/rna_alignment_process_id.py from 644 to 755 changing mode of build/scripts-3.4/rna_alignment_r2r.py from 644 to 755 changing mode of build/scripts-3.4/rna_align_find_seq_in_alignment.py from 644 to 755 changing mode of build/scripts-3.4/rna_align_foldability.py from 644 to 755 changing mode of build/scripts-3.4/rna_pdb_edit_occupancy_bfactor.py from 644 to 755 changing mode of build/scripts-3.4/rna_refinement.py from 644 to 755 changing mode of build/scripts-3.4/rna_simrnaweb_download_job.py from 644 to 755 changing mode of build/scripts-3.4/rna_calc_evo_rmsd.py from 644 to 755 changing mode of build/scripts-3.4/rna_calc_rmsd_multi_targets.py from 644 to 755 changing mode of build/scripts-3.4/rna_calc_rmsd_trafl.py from 644 to 755 changing mode of build/scripts-3.4/rna_cal_rmsd_trafl_plot.py from 644 to 755 changing mode of build/scripts-3.4/rna_x3dna.py from 644 to 755 changing mode of build/scripts-3.4/renum_pdb_to_aln.py from 644 to 755 changing mode of build/scripts-3.4/pdbs_measure_atom_dists.py from 644 to 755 changing mode of build/scripts-3.4/random_assignment_of_nucleotides.py from 644 to 755 changing mode of build/scripts-3.4/select_seq_fromBLAStn_6outfm.py from 644 to 755 changing mode of build/scripts-3.4/pefx.py from 644 to 755 changing mode of build/scripts-3.4/translate.py from 644 to 755 changing mode of build/scripts-3.4/reverse.py from 644 to 755 changing mode of build/scripts-3.4/rna_kd2pkd.py from 644 to 755 changing mode of build/scripts-3.4/rna_pkd2kd.py from 644 to 755 changing mode of build/scripts-3.4/pymol_color_by_conserv.py from 644 to 755 changing mode of build/scripts-3.4/pymol_preview_generator.py from 644 to 755 installing to build/bdist.linux-armv7l/wheel running install running install_lib creating build/bdist.linux-armv7l creating build/bdist.linux-armv7l/wheel copying build/lib/setup.py -> build/bdist.linux-armv7l/wheel copying build/lib/__init__.py -> build/bdist.linux-armv7l/wheel creating build/bdist.linux-armv7l/wheel/rna_tools copying build/lib/rna_tools/rna_tools_config.py -> build/bdist.linux-armv7l/wheel/rna_tools copying build/lib/rna_tools/rna_secondary_structure_prediction.py -> build/bdist.linux-armv7l/wheel/rna_tools copying build/lib/rna_tools/rna_pdb_toolsx.py -> build/bdist.linux-armv7l/wheel/rna_tools copying build/lib/rna_tools/update_readme.py -> build/bdist.linux-armv7l/wheel/rna_tools copying build/lib/rna_tools/rna_tools_test_all.py -> build/bdist.linux-armv7l/wheel/rna_tools copying build/lib/rna_tools/rna_tools_lib.py -> build/bdist.linux-armv7l/wheel/rna_tools copying build/lib/rna_tools/rna_dot2ct.py -> build/bdist.linux-armv7l/wheel/rna_tools copying build/lib/rna_tools/Seq.py -> build/bdist.linux-armv7l/wheel/rna_tools copying build/lib/rna_tools/SecondaryStructure.py -> build/bdist.linux-armv7l/wheel/rna_tools copying build/lib/rna_tools/rna_calc_fenergy.py -> build/bdist.linux-armv7l/wheel/rna_tools copying build/lib/rna_tools/__init__.py -> build/bdist.linux-armv7l/wheel/rna_tools copying build/lib/rna_tools/RfamSearch.py -> build/bdist.linux-armv7l/wheel/rna_tools copying build/lib/rna_tools/BlastPDB.py -> build/bdist.linux-armv7l/wheel/rna_tools copying build/lib/rna_tools/rna_tools_logging.py -> build/bdist.linux-armv7l/wheel/rna_tools copying build/lib/rna_tools/rna_simrnaweb_download_job.py -> build/bdist.linux-armv7l/wheel/rna_tools creating build/bdist.linux-armv7l/wheel/rna_tools/tools creating build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_helix_vis copying build/lib/rna_tools/tools/rna_helix_vis/rna_helix_vis.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_helix_vis copying build/lib/rna_tools/tools/rna_helix_vis/__init__.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_helix_vis creating build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_calc_inf copying build/lib/rna_tools/tools/rna_calc_inf/rna_calc_dinf.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_calc_inf copying build/lib/rna_tools/tools/rna_calc_inf/rna_calc_inf.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_calc_inf copying build/lib/rna_tools/tools/rna_calc_inf/__init__.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_calc_inf creating build/bdist.linux-armv7l/wheel/rna_tools/tools/PyMOL4RNA copying build/lib/rna_tools/tools/PyMOL4RNA/code_for_color_spl.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/PyMOL4RNA copying build/lib/rna_tools/tools/PyMOL4RNA/external_flatten_object.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/PyMOL4RNA copying build/lib/rna_tools/tools/PyMOL4RNA/code_for_color_spl_objects.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/PyMOL4RNA copying build/lib/rna_tools/tools/PyMOL4RNA/PyMOL4RNA.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/PyMOL4RNA copying build/lib/rna_tools/tools/PyMOL4RNA/__init__.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/PyMOL4RNA copying build/lib/rna_tools/tools/PyMOL4RNA/code_for_spl.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/PyMOL4RNA copying build/lib/rna_tools/tools/PyMOL4RNA/Spliceosome_PyMOL.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/PyMOL4RNA copying build/lib/rna_tools/tools/PyMOL4RNA/pymol_daslab.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/PyMOL4RNA creating build/bdist.linux-armv7l/wheel/rna_tools/tools/pdb_formatix copying build/lib/rna_tools/tools/pdb_formatix/test-quick-and-dirty.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/pdb_formatix creating build/bdist.linux-armv7l/wheel/rna_tools/tools/pdb_formatix/test copying build/lib/rna_tools/tools/pdb_formatix/test/__init__.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/pdb_formatix/test copying build/lib/rna_tools/tools/pdb_formatix/test/test.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/pdb_formatix/test copying build/lib/rna_tools/tools/pdb_formatix/RosettaUtils.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/pdb_formatix copying build/lib/rna_tools/tools/pdb_formatix/PDBFile.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/pdb_formatix copying build/lib/rna_tools/tools/pdb_formatix/rebuilder.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/pdb_formatix copying build/lib/rna_tools/tools/pdb_formatix/__init__.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/pdb_formatix copying build/lib/rna_tools/tools/pdb_formatix/SingleLineUtils.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/pdb_formatix creating build/bdist.linux-armv7l/wheel/rna_tools/tools/plotting copying build/lib/rna_tools/tools/plotting/rna_plot_density.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/plotting copying build/lib/rna_tools/tools/plotting/rna_plot_hist.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/plotting copying build/lib/rna_tools/tools/plotting/__init__.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/plotting creating build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_prediction_significance copying build/lib/rna_tools/tools/rna_prediction_significance/rna_prediction_significance.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_prediction_significance copying build/lib/rna_tools/tools/rna_prediction_significance/__init__.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_prediction_significance creating build/bdist.linux-armv7l/wheel/rna_tools/tools/renum_pdb_to_aln copying build/lib/rna_tools/tools/renum_pdb_to_aln/__init__.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/renum_pdb_to_aln copying build/lib/rna_tools/tools/renum_pdb_to_aln/renum_pdb_to_aln.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/renum_pdb_to_aln creating build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_filter copying build/lib/rna_tools/tools/rna_filter/rna_pairs2rfilter.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_filter copying build/lib/rna_tools/tools/rna_filter/rna_get_dists.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_filter copying build/lib/rna_tools/tools/rna_filter/rna_dca_mapping.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_filter copying build/lib/rna_tools/tools/rna_filter/rna_pairs_diff.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_filter copying build/lib/rna_tools/tools/rna_filter/rna_restrs2mqapRNA.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_filter copying build/lib/rna_tools/tools/rna_filter/rna_ec2x.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_filter copying build/lib/rna_tools/tools/rna_filter/rna_restrs2SimRNArestrs.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_filter copying build/lib/rna_tools/tools/rna_filter/simrna_get_restraints.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_filter copying build/lib/rna_tools/tools/rna_filter/rna_csv2pairs.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_filter copying build/lib/rna_tools/tools/rna_filter/test_rna_filter.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_filter copying build/lib/rna_tools/tools/rna_filter/__init__.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_filter copying build/lib/rna_tools/tools/rna_filter/rna_get_distances.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_filter copying build/lib/rna_tools/tools/rna_filter/rna_pairs2SimRNArestrs.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_filter copying build/lib/rna_tools/tools/rna_filter/rna_ss_get_bps.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_filter copying build/lib/rna_tools/tools/rna_filter/rna_filter.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_filter copying build/lib/rna_tools/tools/rna_filter/pymol_dists.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_filter copying build/lib/rna_tools/tools/rna_filter/rna_dca_select_interactions.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_filter creating build/bdist.linux-armv7l/wheel/rna_tools/tools/cluster_load copying build/lib/rna_tools/tools/cluster_load/cluster_mini_free.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/cluster_load copying build/lib/rna_tools/tools/cluster_load/cluster_load.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/cluster_load copying build/lib/rna_tools/tools/cluster_load/__init__.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/cluster_load creating build/bdist.linux-armv7l/wheel/rna_tools/tools/rnakb_utils copying build/lib/rna_tools/tools/rnakb_utils/rnakb_utils.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/rnakb_utils copying build/lib/rna_tools/tools/rnakb_utils/rnakb_utils_test.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/rnakb_utils copying build/lib/rna_tools/tools/rnakb_utils/__init__.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/rnakb_utils copying build/lib/rna_tools/tools/rnakb_utils/test.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/rnakb_utils creating build/bdist.linux-armv7l/wheel/rna_tools/tools/misc copying build/lib/rna_tools/tools/misc/rna_add_chain.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/misc copying build/lib/rna_tools/tools/misc/reverse.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/misc copying build/lib/rna_tools/tools/misc/translate.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/misc copying build/lib/rna_tools/tools/misc/__init__.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/misc copying build/lib/rna_tools/tools/misc/rna_merge_dfs.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/misc copying build/lib/rna_tools/tools/misc/rna_mq_exp.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/misc copying build/lib/rna_tools/tools/misc/rna_mq_plot.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/misc creating build/bdist.linux-armv7l/wheel/rna_tools/tools/clanstix copying build/lib/rna_tools/tools/clanstix/rna_clanstix_v1..py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/clanstix copying build/lib/rna_tools/tools/clanstix/rna_clanstix_parallel_map.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/clanstix copying build/lib/rna_tools/tools/clanstix/rna_clanstix.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/clanstix copying build/lib/rna_tools/tools/clanstix/__init__.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/clanstix creating build/bdist.linux-armv7l/wheel/rna_tools/tools/pymol_drawing copying build/lib/rna_tools/tools/pymol_drawing/__init__.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/pymol_drawing copying build/lib/rna_tools/tools/pymol_drawing/pymol_drawing.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/pymol_drawing creating build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_alignment copying build/lib/rna_tools/tools/rna_alignment/bucket.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_alignment copying build/lib/rna_tools/tools/rna_alignment/rna_alignment.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_alignment copying build/lib/rna_tools/tools/rna_alignment/rna_align_distance_to_seq.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_alignment copying build/lib/rna_tools/tools/rna_alignment/test_rnaseq.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_alignment copying build/lib/rna_tools/tools/rna_alignment/rna_align_find_core.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_alignment copying build/lib/rna_tools/tools/rna_alignment/rna_alignment_r2r.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_alignment copying build/lib/rna_tools/tools/rna_alignment/rna_align_seq_to_alignment.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_alignment copying build/lib/rna_tools/tools/rna_alignment/rna_align_foldability.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_alignment copying build/lib/rna_tools/tools/rna_alignment/rna_align_get_ss_from_fasta.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_alignment copying build/lib/rna_tools/tools/rna_alignment/rna_align_get_ss_from_stk.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_alignment copying build/lib/rna_tools/tools/rna_alignment/__init__.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_alignment copying build/lib/rna_tools/tools/rna_alignment/test_rna_alignment.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_alignment copying build/lib/rna_tools/tools/rna_alignment/test.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_alignment copying build/lib/rna_tools/tools/rna_alignment/random_assignment_of_nucleotides.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_alignment copying build/lib/rna_tools/tools/rna_alignment/rna_align_find_seq_in_alignment.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_alignment creating build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_calc_evo_rmsd copying build/lib/rna_tools/tools/rna_calc_evo_rmsd/rna_calc_evo_rmsd.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_calc_evo_rmsd copying build/lib/rna_tools/tools/rna_calc_evo_rmsd/__init__.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_calc_evo_rmsd copying build/lib/rna_tools/tools/rna_calc_evo_rmsd/RNAalignment.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_calc_evo_rmsd copying build/lib/rna_tools/tools/rna_calc_evo_rmsd/RNAmodel.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_calc_evo_rmsd creating build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_x3dna copying build/lib/rna_tools/tools/rna_x3dna/rna_x3dna_config.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_x3dna copying build/lib/rna_tools/tools/rna_x3dna/rna_x3dna_config_local.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_x3dna copying build/lib/rna_tools/tools/rna_x3dna/rna_x3dna_config_local_sample.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_x3dna copying build/lib/rna_tools/tools/rna_x3dna/__init__.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_x3dna copying build/lib/rna_tools/tools/rna_x3dna/rna_x3dna.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_x3dna creating build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_pdb_merge_structure_with_fragments copying build/lib/rna_tools/tools/rna_pdb_merge_structure_with_fragments/rna_pdb_merge_structure_with_fragments.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_pdb_merge_structure_with_fragments copying build/lib/rna_tools/tools/rna_pdb_merge_structure_with_fragments/__init__.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_pdb_merge_structure_with_fragments creating build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_rosetta copying build/lib/rna_tools/tools/rna_rosetta/rna_rosetta_extract_lowscore_decoys.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_rosetta copying build/lib/rna_tools/tools/rna_rosetta/rna_rosetta_n.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_rosetta copying build/lib/rna_tools/tools/rna_rosetta/rna_rosetta_min.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_rosetta copying build/lib/rna_tools/tools/rna_rosetta/rna_rosetta_head.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_rosetta copying build/lib/rna_tools/tools/rna_rosetta/rna_rosetta_easy_cat.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_rosetta copying build/lib/rna_tools/tools/rna_rosetta/rna_rosetta_run.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_rosetta copying build/lib/rna_tools/tools/rna_rosetta/rna_rosetta_check_progress.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_rosetta copying build/lib/rna_tools/tools/rna_rosetta/__init__.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_rosetta copying build/lib/rna_tools/tools/rna_rosetta/rna_rosetta_copy_job_sandbox.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_rosetta copying build/lib/rna_tools/tools/rna_rosetta/test.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_rosetta copying build/lib/rna_tools/tools/rna_rosetta/rna_rosetta_cluster.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_rosetta creating build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_calc_rmsd copying build/lib/rna_tools/tools/rna_calc_rmsd/rna_calc_rmsd_multi_targets.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_calc_rmsd creating build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_calc_rmsd/lib copying build/lib/rna_tools/tools/rna_calc_rmsd/lib/__init__.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_calc_rmsd/lib creating build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_calc_rmsd/lib/rmsd copying build/lib/rna_tools/tools/rna_calc_rmsd/lib/rmsd/calculate_rmsd.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_calc_rmsd/lib/rmsd copying build/lib/rna_tools/tools/rna_calc_rmsd/lib/rmsd/calculate_rmsd_trytofixselection.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_calc_rmsd/lib/rmsd copying build/lib/rna_tools/tools/rna_calc_rmsd/lib/rmsd/__init__.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_calc_rmsd/lib/rmsd copying build/lib/rna_tools/tools/rna_calc_rmsd/rna_calc_rmsd.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_calc_rmsd copying build/lib/rna_tools/tools/rna_calc_rmsd/rna_calc_rmsd_all_vs_all.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_calc_rmsd copying build/lib/rna_tools/tools/rna_calc_rmsd/__init__.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_calc_rmsd creating build/bdist.linux-armv7l/wheel/rna_tools/tools/extra_functions copying build/lib/rna_tools/tools/extra_functions/gen_numbering.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/extra_functions copying build/lib/rna_tools/tools/extra_functions/__init__.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/extra_functions copying build/lib/rna_tools/tools/extra_functions/select_fragment.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/extra_functions creating build/bdist.linux-armv7l/wheel/rna_tools/tools/simrna_trajectory copying build/lib/rna_tools/tools/simrna_trajectory/test_rna_simrna.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/simrna_trajectory copying build/lib/rna_tools/tools/simrna_trajectory/rna_simrna_cluster.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/simrna_trajectory copying build/lib/rna_tools/tools/simrna_trajectory/rna_simrna_energy_plot.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/simrna_trajectory copying build/lib/rna_tools/tools/simrna_trajectory/rna_simrna_extract.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/simrna_trajectory copying build/lib/rna_tools/tools/simrna_trajectory/__init__.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/simrna_trajectory copying build/lib/rna_tools/tools/simrna_trajectory/rna_simrna_subset.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/simrna_trajectory copying build/lib/rna_tools/tools/simrna_trajectory/simrna_trajectory.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/simrna_trajectory copying build/lib/rna_tools/tools/simrna_trajectory/rna_simrna_lowest.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/simrna_trajectory creating build/bdist.linux-armv7l/wheel/rna_tools/tools/diffpdb copying build/lib/rna_tools/tools/diffpdb/diffpdb.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/diffpdb copying build/lib/rna_tools/tools/diffpdb/__init__.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/diffpdb creating build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_calc_rmsd_trafl copying build/lib/rna_tools/tools/rna_calc_rmsd_trafl/rna_calc_rmsd_trafl.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_calc_rmsd_trafl copying build/lib/rna_tools/tools/rna_calc_rmsd_trafl/rna_cal_rmsd_trafl_plot.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_calc_rmsd_trafl copying build/lib/rna_tools/tools/rna_calc_rmsd_trafl/__init__.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_calc_rmsd_trafl copying build/lib/rna_tools/tools/rna_calc_rmsd_trafl/config_local.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_calc_rmsd_trafl copying build/lib/rna_tools/tools/__init__.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools creating build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_pdb_edit_occupancy_bfactor copying build/lib/rna_tools/tools/rna_pdb_edit_occupancy_bfactor/rna_pdb_edit_occupancy_bfactor_flymake.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_pdb_edit_occupancy_bfactor copying build/lib/rna_tools/tools/rna_pdb_edit_occupancy_bfactor/__init__.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_pdb_edit_occupancy_bfactor copying build/lib/rna_tools/tools/rna_pdb_edit_occupancy_bfactor/rna_pdb_edit_occupancy_bfactor.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_pdb_edit_occupancy_bfactor creating build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_refinement copying build/lib/rna_tools/tools/rna_refinement/__init__.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_refinement copying build/lib/rna_tools/tools/rna_refinement/rna_refinement.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_refinement creating build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_convert_pseudoknot_formats copying build/lib/rna_tools/tools/rna_convert_pseudoknot_formats/__init__.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_convert_pseudoknot_formats copying build/lib/rna_tools/tools/rna_convert_pseudoknot_formats/rna_pk_simrna_to_one_line.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_convert_pseudoknot_formats copying build/lib/rna_tools/tools/rna_convert_pseudoknot_formats/rna_ss_pk_to_simrna.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_convert_pseudoknot_formats creating build/bdist.linux-armv7l/wheel/rna_tools/tools/clarna_app copying build/lib/rna_tools/tools/clarna_app/clarna_app.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/clarna_app copying build/lib/rna_tools/tools/clarna_app/__init__.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/clarna_app copying build/lib/rna_tools/tools/clarna_app/test.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/clarna_app creating build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_sali2dotbracket copying build/lib/rna_tools/tools/rna_sali2dotbracket/__init__.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_sali2dotbracket copying build/lib/rna_tools/tools/rna_sali2dotbracket/rna_sali2dotbracket.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_sali2dotbracket creating build/bdist.linux-armv7l/wheel/rna_tools/tools/pdbs_measure_atom_dists copying build/lib/rna_tools/tools/pdbs_measure_atom_dists/pdbs_measure_atom_dists.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/pdbs_measure_atom_dists copying build/lib/rna_tools/tools/pdbs_measure_atom_dists/__init__.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/pdbs_measure_atom_dists creating build/bdist.linux-armv7l/wheel/rna_tools/tools/ClashCalc copying build/lib/rna_tools/tools/ClashCalc/__init__.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/ClashCalc copying build/lib/rna_tools/tools/ClashCalc/ClashCalc.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/ClashCalc creating build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_bp copying build/lib/rna_tools/tools/rna_bp/base_pair.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_bp copying build/lib/rna_tools/tools/rna_bp/__init__.py -> build/bdist.linux-armv7l/wheel/rna_tools/tools/rna_bp copying build/lib/rna_tools/rna_tools_config_local.py -> build/bdist.linux-armv7l/wheel/rna_tools copying build/lib/test.py -> build/bdist.linux-armv7l/wheel running install_egg_info running egg_info creating rna_tools.egg-info writing dependency_links to rna_tools.egg-info/dependency_links.txt writing top-level names to rna_tools.egg-info/top_level.txt writing rna_tools.egg-info/PKG-INFO writing manifest file 'rna_tools.egg-info/SOURCES.txt' reading manifest file 'rna_tools.egg-info/SOURCES.txt' writing manifest file 'rna_tools.egg-info/SOURCES.txt' Copying rna_tools.egg-info to build/bdist.linux-armv7l/wheel/rna_tools-3.1.1-py3.4.egg-info running install_scripts creating build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data creating build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts copying build/scripts-3.4/rna_pdb_merge_into_one.py -> build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts copying build/scripts-3.4/rna_rosetta_extract_lowscore_decoys.py -> build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts copying build/scripts-3.4/rna_pkd2kd.py -> build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts copying build/scripts-3.4/rna_rosetta_n.py -> build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts copying build/scripts-3.4/rna_calc_evo_rmsd.py -> build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts copying build/scripts-3.4/rna_rosetta_min.py -> build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts copying build/scripts-3.4/rna_calc_inf.py -> build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts copying build/scripts-3.4/clarna_app.py -> build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts copying build/scripts-3.4/rna_calc_rmsd_multi_targets.py -> build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts copying build/scripts-3.4/pymol_preview_generator.py -> build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts copying build/scripts-3.4/rna_alignment_process_id.py -> build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts copying build/scripts-3.4/rna_rosetta_head.py -> build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts copying build/scripts-3.4/rna_calc_rmsd_trafl.py -> build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts copying build/scripts-3.4/rna_secondary_structure_prediction.py -> build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts copying build/scripts-3.4/rna_plot_density.py -> build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts copying build/scripts-3.4/rna_alignment_get_species.py -> build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts copying build/scripts-3.4/pymol_color_by_conserv.py -> build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts copying build/scripts-3.4/rna_plot_hist.py -> build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts copying build/scripts-3.4/rna_cal_rmsd_trafl_plot.py -> build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts copying build/scripts-3.4/rna_pdb_toolsx.py -> build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts copying build/scripts-3.4/rna_pairs_diff.py -> build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts copying build/scripts-3.4/rna_add_chain.py -> build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts copying build/scripts-3.4/rna_rosetta_run.py -> build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts copying build/scripts-3.4/rna_prediction_significance.py -> build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts copying build/scripts-3.4/rna_clanstix.py -> build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts copying build/scripts-3.4/rna_dot2ct.py -> build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts copying build/scripts-3.4/pdbs_measure_atom_dists.py -> build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts copying build/scripts-3.4/rna_align_find_core.py -> build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts copying build/scripts-3.4/rna_calc_rmsd.py -> build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts copying build/scripts-3.4/rna_simrna_cluster.py -> build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts copying build/scripts-3.4/rna_simrna_extract.py -> build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts copying build/scripts-3.4/rna_ec2x.py -> build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts copying build/scripts-3.4/rna_alignment_r2r.py -> build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts copying build/scripts-3.4/rna_align_seq_to_alignment.py -> build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts copying build/scripts-3.4/rna_align_foldability.py -> build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts copying build/scripts-3.4/rna_rosetta_check_progress.py -> build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts copying build/scripts-3.4/rna_kd2pkd.py -> build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts copying build/scripts-3.4/diffpdb.py -> build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts copying build/scripts-3.4/reverse.py -> build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts copying build/scripts-3.4/rna_helix_vis.py -> build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts copying build/scripts-3.4/rna_calc_rmsd_all_vs_all.py -> build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts copying build/scripts-3.4/rna_align_get_ss_from_stk.py -> build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts copying build/scripts-3.4/translate.py -> build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts copying build/scripts-3.4/pefx.py -> build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts copying build/scripts-3.4/rna_refinement.py -> build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts copying build/scripts-3.4/rna_pdb_edit_occupancy_bfactor.py -> build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts copying build/scripts-3.4/rna_pairs2SimRNArestrs.py -> build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts copying build/scripts-3.4/rna_ss_get_bps.py -> build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts copying build/scripts-3.4/rna_pk_simrna_to_one_line.py -> build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts copying build/scripts-3.4/renum_pdb_to_aln.py -> build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts copying build/scripts-3.4/rna_sali2dotbracket.py -> build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts copying build/scripts-3.4/rna_filter.py -> build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts copying build/scripts-3.4/random_assignment_of_nucleotides.py -> build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts copying build/scripts-3.4/select_seq_fromBLAStn_6outfm.py -> build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts copying build/scripts-3.4/rna_simrnaweb_download_job.py -> build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts copying build/scripts-3.4/rna_simrna_lowest.py -> build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts copying build/scripts-3.4/rna_x3dna.py -> build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts copying build/scripts-3.4/rna_rosetta_cluster.py -> build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts copying build/scripts-3.4/rna_align_find_seq_in_alignment.py -> build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts changing mode of build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts/rna_pdb_merge_into_one.py to 755 changing mode of build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts/rna_rosetta_extract_lowscore_decoys.py to 755 changing mode of build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts/rna_pkd2kd.py to 755 changing mode of build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts/rna_rosetta_n.py to 755 changing mode of build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts/rna_calc_evo_rmsd.py to 755 changing mode of build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts/rna_rosetta_min.py to 755 changing mode of build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts/rna_calc_inf.py to 755 changing mode of build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts/clarna_app.py to 755 changing mode of build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts/rna_calc_rmsd_multi_targets.py to 755 changing mode of build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts/pymol_preview_generator.py to 755 changing mode of build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts/rna_alignment_process_id.py to 755 changing mode of build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts/rna_rosetta_head.py to 755 changing mode of build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts/rna_calc_rmsd_trafl.py to 755 changing mode of build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts/rna_secondary_structure_prediction.py to 755 changing mode of build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts/rna_plot_density.py to 755 changing mode of build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts/rna_alignment_get_species.py to 755 changing mode of build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts/pymol_color_by_conserv.py to 755 changing mode of build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts/rna_plot_hist.py to 755 changing mode of build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts/rna_cal_rmsd_trafl_plot.py to 755 changing mode of build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts/rna_pdb_toolsx.py to 755 changing mode of build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts/rna_pairs_diff.py to 755 changing mode of build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts/rna_add_chain.py to 755 changing mode of build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts/rna_rosetta_run.py to 755 changing mode of build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts/rna_prediction_significance.py to 755 changing mode of build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts/rna_clanstix.py to 755 changing mode of build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts/rna_dot2ct.py to 755 changing mode of build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts/pdbs_measure_atom_dists.py to 755 changing mode of build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts/rna_align_find_core.py to 755 changing mode of build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts/rna_calc_rmsd.py to 755 changing mode of build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts/rna_simrna_cluster.py to 755 changing mode of build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts/rna_simrna_extract.py to 755 changing mode of build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts/rna_ec2x.py to 755 changing mode of build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts/rna_alignment_r2r.py to 755 changing mode of build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts/rna_align_seq_to_alignment.py to 755 changing mode of build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts/rna_align_foldability.py to 755 changing mode of build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts/rna_rosetta_check_progress.py to 755 changing mode of build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts/rna_kd2pkd.py to 755 changing mode of build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts/diffpdb.py to 755 changing mode of build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts/reverse.py to 755 changing mode of build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts/rna_helix_vis.py to 755 changing mode of build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts/rna_calc_rmsd_all_vs_all.py to 755 changing mode of build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts/rna_align_get_ss_from_stk.py to 755 changing mode of build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts/translate.py to 755 changing mode of build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts/pefx.py to 755 changing mode of build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts/rna_refinement.py to 755 changing mode of build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts/rna_pdb_edit_occupancy_bfactor.py to 755 changing mode of build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts/rna_pairs2SimRNArestrs.py to 755 changing mode of build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts/rna_ss_get_bps.py to 755 changing mode of build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts/rna_pk_simrna_to_one_line.py to 755 changing mode of build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts/renum_pdb_to_aln.py to 755 changing mode of build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts/rna_sali2dotbracket.py to 755 changing mode of build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts/rna_filter.py to 755 changing mode of build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts/random_assignment_of_nucleotides.py to 755 changing mode of build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts/select_seq_fromBLAStn_6outfm.py to 755 changing mode of build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts/rna_simrnaweb_download_job.py to 755 changing mode of build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts/rna_simrna_lowest.py to 755 changing mode of build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts/rna_x3dna.py to 755 changing mode of build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts/rna_rosetta_cluster.py to 755 changing mode of build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.data/scripts/rna_align_find_seq_in_alignment.py to 755 creating build/bdist.linux-armv7l/wheel/rna_tools-3.1.1.dist-info/WHEEL creating '/tmp/pip-wheel-0qc0b54e/rna_tools-3.1.1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it adding '__init__.py' adding 'setup.py' adding 'test.py' adding 'rna_tools/BlastPDB.py' adding 'rna_tools/RfamSearch.py' adding 'rna_tools/SecondaryStructure.py' adding 'rna_tools/Seq.py' adding 'rna_tools/__init__.py' adding 'rna_tools/rna_calc_fenergy.py' adding 'rna_tools/rna_dot2ct.py' adding 'rna_tools/rna_pdb_toolsx.py' adding 'rna_tools/rna_secondary_structure_prediction.py' adding 'rna_tools/rna_simrnaweb_download_job.py' adding 'rna_tools/rna_tools_config.py' adding 'rna_tools/rna_tools_config_local.py' adding 'rna_tools/rna_tools_lib.py' adding 'rna_tools/rna_tools_logging.py' adding 'rna_tools/rna_tools_test_all.py' adding 'rna_tools/update_readme.py' adding 'rna_tools/tools/__init__.py' adding 'rna_tools/tools/ClashCalc/ClashCalc.py' adding 'rna_tools/tools/ClashCalc/__init__.py' adding 'rna_tools/tools/PyMOL4RNA/PyMOL4RNA.py' adding 'rna_tools/tools/PyMOL4RNA/Spliceosome_PyMOL.py' adding 'rna_tools/tools/PyMOL4RNA/__init__.py' adding 'rna_tools/tools/PyMOL4RNA/code_for_color_spl.py' adding 'rna_tools/tools/PyMOL4RNA/code_for_color_spl_objects.py' adding 'rna_tools/tools/PyMOL4RNA/code_for_spl.py' adding 'rna_tools/tools/PyMOL4RNA/external_flatten_object.py' adding 'rna_tools/tools/PyMOL4RNA/pymol_daslab.py' adding 'rna_tools/tools/clanstix/__init__.py' adding 'rna_tools/tools/clanstix/rna_clanstix.py' adding 'rna_tools/tools/clanstix/rna_clanstix_parallel_map.py' adding 'rna_tools/tools/clanstix/rna_clanstix_v1..py' adding 'rna_tools/tools/clarna_app/__init__.py' adding 'rna_tools/tools/clarna_app/clarna_app.py' adding 'rna_tools/tools/clarna_app/test.py' adding 'rna_tools/tools/cluster_load/__init__.py' adding 'rna_tools/tools/cluster_load/cluster_load.py' adding 'rna_tools/tools/cluster_load/cluster_mini_free.py' adding 'rna_tools/tools/diffpdb/__init__.py' adding 'rna_tools/tools/diffpdb/diffpdb.py' adding 'rna_tools/tools/extra_functions/__init__.py' adding 'rna_tools/tools/extra_functions/gen_numbering.py' adding 'rna_tools/tools/extra_functions/select_fragment.py' adding 'rna_tools/tools/misc/__init__.py' adding 'rna_tools/tools/misc/reverse.py' adding 'rna_tools/tools/misc/rna_add_chain.py' adding 'rna_tools/tools/misc/rna_merge_dfs.py' adding 'rna_tools/tools/misc/rna_mq_exp.py' adding 'rna_tools/tools/misc/rna_mq_plot.py' adding 'rna_tools/tools/misc/translate.py' adding 'rna_tools/tools/pdb_formatix/PDBFile.py' adding 'rna_tools/tools/pdb_formatix/RosettaUtils.py' adding 'rna_tools/tools/pdb_formatix/SingleLineUtils.py' adding 'rna_tools/tools/pdb_formatix/__init__.py' adding 'rna_tools/tools/pdb_formatix/rebuilder.py' adding 'rna_tools/tools/pdb_formatix/test-quick-and-dirty.py' adding 'rna_tools/tools/pdb_formatix/test/__init__.py' adding 'rna_tools/tools/pdb_formatix/test/test.py' adding 'rna_tools/tools/pdbs_measure_atom_dists/__init__.py' adding 'rna_tools/tools/pdbs_measure_atom_dists/pdbs_measure_atom_dists.py' adding 'rna_tools/tools/plotting/__init__.py' adding 'rna_tools/tools/plotting/rna_plot_density.py' adding 'rna_tools/tools/plotting/rna_plot_hist.py' adding 'rna_tools/tools/pymol_drawing/__init__.py' adding 'rna_tools/tools/pymol_drawing/pymol_drawing.py' adding 'rna_tools/tools/renum_pdb_to_aln/__init__.py' adding 'rna_tools/tools/renum_pdb_to_aln/renum_pdb_to_aln.py' adding 'rna_tools/tools/rna_alignment/__init__.py' adding 'rna_tools/tools/rna_alignment/bucket.py' adding 'rna_tools/tools/rna_alignment/random_assignment_of_nucleotides.py' adding 'rna_tools/tools/rna_alignment/rna_align_distance_to_seq.py' adding 'rna_tools/tools/rna_alignment/rna_align_find_core.py' adding 'rna_tools/tools/rna_alignment/rna_align_find_seq_in_alignment.py' adding 'rna_tools/tools/rna_alignment/rna_align_foldability.py' adding 'rna_tools/tools/rna_alignment/rna_align_get_ss_from_fasta.py' adding 'rna_tools/tools/rna_alignment/rna_align_get_ss_from_stk.py' adding 'rna_tools/tools/rna_alignment/rna_align_seq_to_alignment.py' adding 'rna_tools/tools/rna_alignment/rna_alignment.py' adding 'rna_tools/tools/rna_alignment/rna_alignment_r2r.py' adding 'rna_tools/tools/rna_alignment/test.py' adding 'rna_tools/tools/rna_alignment/test_rna_alignment.py' adding 'rna_tools/tools/rna_alignment/test_rnaseq.py' adding 'rna_tools/tools/rna_bp/__init__.py' adding 'rna_tools/tools/rna_bp/base_pair.py' adding 'rna_tools/tools/rna_calc_evo_rmsd/RNAalignment.py' adding 'rna_tools/tools/rna_calc_evo_rmsd/RNAmodel.py' adding 'rna_tools/tools/rna_calc_evo_rmsd/__init__.py' adding 'rna_tools/tools/rna_calc_evo_rmsd/rna_calc_evo_rmsd.py' adding 'rna_tools/tools/rna_calc_inf/__init__.py' adding 'rna_tools/tools/rna_calc_inf/rna_calc_dinf.py' adding 'rna_tools/tools/rna_calc_inf/rna_calc_inf.py' adding 'rna_tools/tools/rna_calc_rmsd/__init__.py' adding 'rna_tools/tools/rna_calc_rmsd/rna_calc_rmsd.py' adding 'rna_tools/tools/rna_calc_rmsd/rna_calc_rmsd_all_vs_all.py' adding 'rna_tools/tools/rna_calc_rmsd/rna_calc_rmsd_multi_targets.py' adding 'rna_tools/tools/rna_calc_rmsd/lib/__init__.py' adding 'rna_tools/tools/rna_calc_rmsd/lib/rmsd/__init__.py' adding 'rna_tools/tools/rna_calc_rmsd/lib/rmsd/calculate_rmsd.py' adding 'rna_tools/tools/rna_calc_rmsd/lib/rmsd/calculate_rmsd_trytofixselection.py' adding 'rna_tools/tools/rna_calc_rmsd_trafl/__init__.py' adding 'rna_tools/tools/rna_calc_rmsd_trafl/config_local.py' adding 'rna_tools/tools/rna_calc_rmsd_trafl/rna_cal_rmsd_trafl_plot.py' adding 'rna_tools/tools/rna_calc_rmsd_trafl/rna_calc_rmsd_trafl.py' adding 'rna_tools/tools/rna_convert_pseudoknot_formats/__init__.py' adding 'rna_tools/tools/rna_convert_pseudoknot_formats/rna_pk_simrna_to_one_line.py' adding 'rna_tools/tools/rna_convert_pseudoknot_formats/rna_ss_pk_to_simrna.py' adding 'rna_tools/tools/rna_filter/__init__.py' adding 'rna_tools/tools/rna_filter/pymol_dists.py' adding 'rna_tools/tools/rna_filter/rna_csv2pairs.py' adding 'rna_tools/tools/rna_filter/rna_dca_mapping.py' adding 'rna_tools/tools/rna_filter/rna_dca_select_interactions.py' adding 'rna_tools/tools/rna_filter/rna_ec2x.py' adding 'rna_tools/tools/rna_filter/rna_filter.py' adding 'rna_tools/tools/rna_filter/rna_get_distances.py' adding 'rna_tools/tools/rna_filter/rna_get_dists.py' adding 'rna_tools/tools/rna_filter/rna_pairs2SimRNArestrs.py' adding 'rna_tools/tools/rna_filter/rna_pairs2rfilter.py' adding 'rna_tools/tools/rna_filter/rna_pairs_diff.py' adding 'rna_tools/tools/rna_filter/rna_restrs2SimRNArestrs.py' adding 'rna_tools/tools/rna_filter/rna_restrs2mqapRNA.py' adding 'rna_tools/tools/rna_filter/rna_ss_get_bps.py' adding 'rna_tools/tools/rna_filter/simrna_get_restraints.py' adding 'rna_tools/tools/rna_filter/test_rna_filter.py' adding 'rna_tools/tools/rna_helix_vis/__init__.py' adding 'rna_tools/tools/rna_helix_vis/rna_helix_vis.py' adding 'rna_tools/tools/rna_pdb_edit_occupancy_bfactor/__init__.py' adding 'rna_tools/tools/rna_pdb_edit_occupancy_bfactor/rna_pdb_edit_occupancy_bfactor.py' adding 'rna_tools/tools/rna_pdb_edit_occupancy_bfactor/rna_pdb_edit_occupancy_bfactor_flymake.py' adding 'rna_tools/tools/rna_pdb_merge_structure_with_fragments/__init__.py' adding 'rna_tools/tools/rna_pdb_merge_structure_with_fragments/rna_pdb_merge_structure_with_fragments.py' adding 'rna_tools/tools/rna_prediction_significance/__init__.py' adding 'rna_tools/tools/rna_prediction_significance/rna_prediction_significance.py' adding 'rna_tools/tools/rna_refinement/__init__.py' adding 'rna_tools/tools/rna_refinement/rna_refinement.py' adding 'rna_tools/tools/rna_rosetta/__init__.py' adding 'rna_tools/tools/rna_rosetta/rna_rosetta_check_progress.py' adding 'rna_tools/tools/rna_rosetta/rna_rosetta_cluster.py' adding 'rna_tools/tools/rna_rosetta/rna_rosetta_copy_job_sandbox.py' adding 'rna_tools/tools/rna_rosetta/rna_rosetta_easy_cat.py' adding 'rna_tools/tools/rna_rosetta/rna_rosetta_extract_lowscore_decoys.py' adding 'rna_tools/tools/rna_rosetta/rna_rosetta_head.py' adding 'rna_tools/tools/rna_rosetta/rna_rosetta_min.py' adding 'rna_tools/tools/rna_rosetta/rna_rosetta_n.py' adding 'rna_tools/tools/rna_rosetta/rna_rosetta_run.py' adding 'rna_tools/tools/rna_rosetta/test.py' adding 'rna_tools/tools/rna_sali2dotbracket/__init__.py' adding 'rna_tools/tools/rna_sali2dotbracket/rna_sali2dotbracket.py' adding 'rna_tools/tools/rna_x3dna/__init__.py' adding 'rna_tools/tools/rna_x3dna/rna_x3dna.py' adding 'rna_tools/tools/rna_x3dna/rna_x3dna_config.py' adding 'rna_tools/tools/rna_x3dna/rna_x3dna_config_local.py' adding 'rna_tools/tools/rna_x3dna/rna_x3dna_config_local_sample.py' adding 'rna_tools/tools/rnakb_utils/__init__.py' adding 'rna_tools/tools/rnakb_utils/rnakb_utils.py' adding 'rna_tools/tools/rnakb_utils/rnakb_utils_test.py' adding 'rna_tools/tools/rnakb_utils/test.py' adding 'rna_tools/tools/simrna_trajectory/__init__.py' adding 'rna_tools/tools/simrna_trajectory/rna_simrna_cluster.py' adding 'rna_tools/tools/simrna_trajectory/rna_simrna_energy_plot.py' adding 'rna_tools/tools/simrna_trajectory/rna_simrna_extract.py' adding 'rna_tools/tools/simrna_trajectory/rna_simrna_lowest.py' adding 'rna_tools/tools/simrna_trajectory/rna_simrna_subset.py' adding 'rna_tools/tools/simrna_trajectory/simrna_trajectory.py' adding 'rna_tools/tools/simrna_trajectory/test_rna_simrna.py' adding 'rna_tools-3.1.1.data/scripts/clarna_app.py' adding 'rna_tools-3.1.1.data/scripts/diffpdb.py' adding 'rna_tools-3.1.1.data/scripts/pdbs_measure_atom_dists.py' adding 'rna_tools-3.1.1.data/scripts/pefx.py' adding 'rna_tools-3.1.1.data/scripts/pymol_color_by_conserv.py' adding 'rna_tools-3.1.1.data/scripts/pymol_preview_generator.py' adding 'rna_tools-3.1.1.data/scripts/random_assignment_of_nucleotides.py' adding 'rna_tools-3.1.1.data/scripts/renum_pdb_to_aln.py' adding 'rna_tools-3.1.1.data/scripts/reverse.py' adding 'rna_tools-3.1.1.data/scripts/rna_add_chain.py' adding 'rna_tools-3.1.1.data/scripts/rna_align_find_core.py' adding 'rna_tools-3.1.1.data/scripts/rna_align_find_seq_in_alignment.py' adding 'rna_tools-3.1.1.data/scripts/rna_align_foldability.py' adding 'rna_tools-3.1.1.data/scripts/rna_align_get_ss_from_stk.py' adding 'rna_tools-3.1.1.data/scripts/rna_align_seq_to_alignment.py' adding 'rna_tools-3.1.1.data/scripts/rna_alignment_get_species.py' adding 'rna_tools-3.1.1.data/scripts/rna_alignment_process_id.py' adding 'rna_tools-3.1.1.data/scripts/rna_alignment_r2r.py' adding 'rna_tools-3.1.1.data/scripts/rna_cal_rmsd_trafl_plot.py' adding 'rna_tools-3.1.1.data/scripts/rna_calc_evo_rmsd.py' adding 'rna_tools-3.1.1.data/scripts/rna_calc_inf.py' adding 'rna_tools-3.1.1.data/scripts/rna_calc_rmsd.py' adding 'rna_tools-3.1.1.data/scripts/rna_calc_rmsd_all_vs_all.py' adding 'rna_tools-3.1.1.data/scripts/rna_calc_rmsd_multi_targets.py' adding 'rna_tools-3.1.1.data/scripts/rna_calc_rmsd_trafl.py' adding 'rna_tools-3.1.1.data/scripts/rna_clanstix.py' adding 'rna_tools-3.1.1.data/scripts/rna_dot2ct.py' adding 'rna_tools-3.1.1.data/scripts/rna_ec2x.py' adding 'rna_tools-3.1.1.data/scripts/rna_filter.py' adding 'rna_tools-3.1.1.data/scripts/rna_helix_vis.py' adding 'rna_tools-3.1.1.data/scripts/rna_kd2pkd.py' adding 'rna_tools-3.1.1.data/scripts/rna_pairs2SimRNArestrs.py' adding 'rna_tools-3.1.1.data/scripts/rna_pairs_diff.py' adding 'rna_tools-3.1.1.data/scripts/rna_pdb_edit_occupancy_bfactor.py' adding 'rna_tools-3.1.1.data/scripts/rna_pdb_merge_into_one.py' adding 'rna_tools-3.1.1.data/scripts/rna_pdb_toolsx.py' adding 'rna_tools-3.1.1.data/scripts/rna_pk_simrna_to_one_line.py' adding 'rna_tools-3.1.1.data/scripts/rna_pkd2kd.py' adding 'rna_tools-3.1.1.data/scripts/rna_plot_density.py' adding 'rna_tools-3.1.1.data/scripts/rna_plot_hist.py' adding 'rna_tools-3.1.1.data/scripts/rna_prediction_significance.py' adding 'rna_tools-3.1.1.data/scripts/rna_refinement.py' adding 'rna_tools-3.1.1.data/scripts/rna_rosetta_check_progress.py' adding 'rna_tools-3.1.1.data/scripts/rna_rosetta_cluster.py' adding 'rna_tools-3.1.1.data/scripts/rna_rosetta_extract_lowscore_decoys.py' adding 'rna_tools-3.1.1.data/scripts/rna_rosetta_head.py' adding 'rna_tools-3.1.1.data/scripts/rna_rosetta_min.py' adding 'rna_tools-3.1.1.data/scripts/rna_rosetta_n.py' adding 'rna_tools-3.1.1.data/scripts/rna_rosetta_run.py' adding 'rna_tools-3.1.1.data/scripts/rna_sali2dotbracket.py' adding 'rna_tools-3.1.1.data/scripts/rna_secondary_structure_prediction.py' adding 'rna_tools-3.1.1.data/scripts/rna_simrna_cluster.py' adding 'rna_tools-3.1.1.data/scripts/rna_simrna_extract.py' adding 'rna_tools-3.1.1.data/scripts/rna_simrna_lowest.py' adding 'rna_tools-3.1.1.data/scripts/rna_simrnaweb_download_job.py' adding 'rna_tools-3.1.1.data/scripts/rna_ss_get_bps.py' adding 'rna_tools-3.1.1.data/scripts/rna_x3dna.py' adding 'rna_tools-3.1.1.data/scripts/select_seq_fromBLAStn_6outfm.py' adding 'rna_tools-3.1.1.data/scripts/translate.py' adding 'rna_tools-3.1.1.dist-info/METADATA' adding 'rna_tools-3.1.1.dist-info/WHEEL' adding 'rna_tools-3.1.1.dist-info/top_level.txt' adding 'rna_tools-3.1.1.dist-info/RECORD' removing build/bdist.linux-armv7l/wheel Running setup.py bdist_wheel for rna-tools: finished with status 'done' Stored in directory: /tmp/tmp_511qm55 Successfully built rna-tools Cleaning up... Removing source in /tmp/pip-wheel-twuubecb/rna-tools Removed build tracker '/tmp/pip-req-tracker-79p2js3u'