2020-04-06T01:04:45,491 Created temporary directory: /tmp/pip-ephem-wheel-cache-jtgfgdj8
2020-04-06T01:04:45,495 Created temporary directory: /tmp/pip-req-tracker-7g0uu_9x
2020-04-06T01:04:45,496 Initialized build tracking at /tmp/pip-req-tracker-7g0uu_9x
2020-04-06T01:04:45,496 Created build tracker: /tmp/pip-req-tracker-7g0uu_9x
2020-04-06T01:04:45,496 Entered build tracker: /tmp/pip-req-tracker-7g0uu_9x
2020-04-06T01:04:45,497 Created temporary directory: /tmp/pip-wheel-dlso30_l
2020-04-06T01:04:45,502 1 location(s) to search for versions of maicos:
2020-04-06T01:04:45,502 * https://pypi.org/simple/maicos/
2020-04-06T01:04:45,503 Fetching project page and analyzing links: https://pypi.org/simple/maicos/
2020-04-06T01:04:45,503 Getting page https://pypi.org/simple/maicos/
2020-04-06T01:04:45,506 Found index url https://pypi.org/simple
2020-04-06T01:04:45,509 Getting credentials from keyring for https://pypi.org/simple
2020-04-06T01:04:45,509 Getting credentials from keyring for pypi.org
2020-04-06T01:04:45,773   Found link https://files.pythonhosted.org/packages/ea/c4/8c22e710d2354fad41121756c965dbb03bb829aaa512655b75fcd3d31286/maicos-0.2.tar.gz#sha256=d71541de31ac6bba4e10772f09dc0a695d0f096800fea9a7efe3daa05ee881be (from https://pypi.org/simple/maicos/) (requires-python:>=3.6), version: 0.2
2020-04-06T01:04:45,780 Given no hashes to check 1 links for project 'maicos': discarding no candidates
2020-04-06T01:04:45,781 Using version 0.2 (newest of versions: 0.2)
2020-04-06T01:04:45,785 Collecting maicos==0.2
2020-04-06T01:04:45,788   Created temporary directory: /tmp/pip-unpack-deneyqav
2020-04-06T01:04:45,790   Getting credentials from keyring for files.pythonhosted.org
2020-04-06T01:04:46,066   Downloading maicos-0.2.tar.gz (163 kB)
2020-04-06T01:04:46,327   Added maicos==0.2 from https://files.pythonhosted.org/packages/ea/c4/8c22e710d2354fad41121756c965dbb03bb829aaa512655b75fcd3d31286/maicos-0.2.tar.gz#sha256=d71541de31ac6bba4e10772f09dc0a695d0f096800fea9a7efe3daa05ee881be to build tracker '/tmp/pip-req-tracker-7g0uu_9x'
2020-04-06T01:04:46,328     Running setup.py (path:/tmp/pip-wheel-dlso30_l/maicos/setup.py) egg_info for package maicos
2020-04-06T01:04:46,329     Running command python setup.py egg_info
2020-04-06T01:04:57,356     Attempting to autodetect OpenMP support... Compiler supports OpenMP
2020-04-06T01:04:57,357     running egg_info
2020-04-06T01:04:57,360     creating /tmp/pip-wheel-dlso30_l/maicos/pip-egg-info/maicos.egg-info
2020-04-06T01:04:57,361     writing /tmp/pip-wheel-dlso30_l/maicos/pip-egg-info/maicos.egg-info/PKG-INFO
2020-04-06T01:04:57,366     writing dependency_links to /tmp/pip-wheel-dlso30_l/maicos/pip-egg-info/maicos.egg-info/dependency_links.txt
2020-04-06T01:04:57,369     writing entry points to /tmp/pip-wheel-dlso30_l/maicos/pip-egg-info/maicos.egg-info/entry_points.txt
2020-04-06T01:04:57,371     writing requirements to /tmp/pip-wheel-dlso30_l/maicos/pip-egg-info/maicos.egg-info/requires.txt
2020-04-06T01:04:57,373     writing top-level names to /tmp/pip-wheel-dlso30_l/maicos/pip-egg-info/maicos.egg-info/top_level.txt
2020-04-06T01:04:57,376     writing manifest file '/tmp/pip-wheel-dlso30_l/maicos/pip-egg-info/maicos.egg-info/SOURCES.txt'
2020-04-06T01:04:59,241     reading manifest file '/tmp/pip-wheel-dlso30_l/maicos/pip-egg-info/maicos.egg-info/SOURCES.txt'
2020-04-06T01:04:59,246     reading manifest template 'MANIFEST.in'
2020-04-06T01:04:59,272     writing manifest file '/tmp/pip-wheel-dlso30_l/maicos/pip-egg-info/maicos.egg-info/SOURCES.txt'
2020-04-06T01:04:59,575   Source in /tmp/pip-wheel-dlso30_l/maicos has version 0.2, which satisfies requirement maicos==0.2 from https://files.pythonhosted.org/packages/ea/c4/8c22e710d2354fad41121756c965dbb03bb829aaa512655b75fcd3d31286/maicos-0.2.tar.gz#sha256=d71541de31ac6bba4e10772f09dc0a695d0f096800fea9a7efe3daa05ee881be
2020-04-06T01:04:59,576   Removed maicos==0.2 from https://files.pythonhosted.org/packages/ea/c4/8c22e710d2354fad41121756c965dbb03bb829aaa512655b75fcd3d31286/maicos-0.2.tar.gz#sha256=d71541de31ac6bba4e10772f09dc0a695d0f096800fea9a7efe3daa05ee881be from build tracker '/tmp/pip-req-tracker-7g0uu_9x'
2020-04-06T01:04:59,581 Building wheels for collected packages: maicos
2020-04-06T01:04:59,587   Created temporary directory: /tmp/pip-wheel-29bzygo8
2020-04-06T01:04:59,588   Building wheel for maicos (setup.py): started
2020-04-06T01:04:59,589   Destination directory: /tmp/pip-wheel-29bzygo8
2020-04-06T01:04:59,589   Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-dlso30_l/maicos/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-dlso30_l/maicos/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-29bzygo8
2020-04-06T01:05:01,837   Attempting to autodetect OpenMP support... Compiler supports OpenMP
2020-04-06T01:05:02,548   running bdist_wheel
2020-04-06T01:05:02,555   running build
2020-04-06T01:05:02,556   running build_py
2020-04-06T01:05:02,772   creating build
2020-04-06T01:05:02,772   creating build/lib.linux-armv7l-3.7
2020-04-06T01:05:02,774   creating build/lib.linux-armv7l-3.7/maicos
2020-04-06T01:05:02,776   copying maicos/tables.py -> build/lib.linux-armv7l-3.7/maicos
2020-04-06T01:05:02,779   copying maicos/utils.py -> build/lib.linux-armv7l-3.7/maicos
2020-04-06T01:05:02,783   copying maicos/__main__.py -> build/lib.linux-armv7l-3.7/maicos
2020-04-06T01:05:02,787   copying maicos/decorators.py -> build/lib.linux-armv7l-3.7/maicos
2020-04-06T01:05:02,790   copying maicos/arg_completion.py -> build/lib.linux-armv7l-3.7/maicos
2020-04-06T01:05:02,793   copying maicos/__init__.py -> build/lib.linux-armv7l-3.7/maicos
2020-04-06T01:05:02,798   creating build/lib.linux-armv7l-3.7/maicos/modules
2020-04-06T01:05:02,799   copying maicos/modules/base.py -> build/lib.linux-armv7l-3.7/maicos/modules
2020-04-06T01:05:02,803   copying maicos/modules/timeseries.py -> build/lib.linux-armv7l-3.7/maicos/modules
2020-04-06T01:05:02,807   copying maicos/modules/transport.py -> build/lib.linux-armv7l-3.7/maicos/modules
2020-04-06T01:05:02,813   copying maicos/modules/density.py -> build/lib.linux-armv7l-3.7/maicos/modules
2020-04-06T01:05:02,820   copying maicos/modules/epsilon.py -> build/lib.linux-armv7l-3.7/maicos/modules
2020-04-06T01:05:02,827   copying maicos/modules/__init__.py -> build/lib.linux-armv7l-3.7/maicos/modules
2020-04-06T01:05:02,830   copying maicos/modules/structure.py -> build/lib.linux-armv7l-3.7/maicos/modules
2020-04-06T01:05:02,834   running egg_info
2020-04-06T01:05:02,857   writing maicos.egg-info/PKG-INFO
2020-04-06T01:05:02,865   writing dependency_links to maicos.egg-info/dependency_links.txt
2020-04-06T01:05:02,869   writing entry points to maicos.egg-info/entry_points.txt
2020-04-06T01:05:02,872   writing requirements to maicos.egg-info/requires.txt
2020-04-06T01:05:02,875   writing top-level names to maicos.egg-info/top_level.txt
2020-04-06T01:05:03,165   reading manifest file 'maicos.egg-info/SOURCES.txt'
2020-04-06T01:05:03,170   reading manifest template 'MANIFEST.in'
2020-04-06T01:05:03,203   writing manifest file 'maicos.egg-info/SOURCES.txt'
2020-04-06T01:05:03,207   creating build/lib.linux-armv7l-3.7/maicos/lib
2020-04-06T01:05:03,209   copying maicos/lib/sfactor.c -> build/lib.linux-armv7l-3.7/maicos/lib
2020-04-06T01:05:03,260   copying maicos/lib/sfactor.pyx -> build/lib.linux-armv7l-3.7/maicos/lib
2020-04-06T01:05:03,266   creating build/lib.linux-armv7l-3.7/maicos/share
2020-04-06T01:05:03,268   copying maicos/share/atomtypes.dat -> build/lib.linux-armv7l-3.7/maicos/share
2020-04-06T01:05:03,274   copying maicos/share/maicos-completion.bash -> build/lib.linux-armv7l-3.7/maicos/share
2020-04-06T01:05:03,280   copying maicos/share/sfactor.dat -> build/lib.linux-armv7l-3.7/maicos/share
2020-04-06T01:05:03,289   running build_ext
2020-04-06T01:05:03,292   building 'maicos.lib.sfactor' extension
2020-04-06T01:05:03,293   creating build/temp.linux-armv7l-3.7
2020-04-06T01:05:03,294   creating build/temp.linux-armv7l-3.7/maicos
2020-04-06T01:05:03,295   creating build/temp.linux-armv7l-3.7/maicos/lib
2020-04-06T01:05:03,296   arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.7m -c maicos/lib/sfactor.c -o build/temp.linux-armv7l-3.7/maicos/lib/sfactor.o -std=c99 -ffast-math -O3 -funroll-loops -fopenmp
2020-04-06T01:05:06,300   In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
2020-04-06T01:05:06,301                    from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2020-04-06T01:05:06,302                    from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
2020-04-06T01:05:06,304                    from maicos/lib/sfactor.c:633:
2020-04-06T01:05:06,304   /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2020-04-06T01:05:06,305    #warning "Using deprecated NumPy API, disable it with " \
2020-04-06T01:05:06,306     ^~~~~~~
2020-04-06T01:05:33,958   maicos/lib/sfactor.c: In function ‘__pyx_pw_6maicos_3lib_7sfactor_1compute_structure_factor’:
2020-04-06T01:05:33,959   maicos/lib/sfactor.c:2867:25: warning: ‘__pyx_v_sin’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2020-04-06T01:05:33,959                    #pragma omp parallel reduction(+:__pyx_v_cos) reduction(+:__pyx_v_sin) private(__pyx_t_18, __pyx_t_19, __pyx_t_20, __pyx_t_21, __pyx_t_22, __pyx_t_23, __pyx_t_24, __pyx_t_25, __pyx_t_26, __pyx_t_27, __pyx_t_28, __pyx_t_29, __pyx_t_30, __pyx_t_31, __pyx_t_32, __pyx_t_33, __pyx_t_34, __pyx_t_35, __pyx_t_36, __pyx_t_37, __pyx_t_38, __pyx_t_39, __pyx_t_40, __pyx_t_41, __pyx_t_42, __pyx_t_43, __pyx_t_44, __pyx_t_45)
2020-04-06T01:05:33,960                            ^~~
2020-04-06T01:05:33,960   maicos/lib/sfactor.c:2553:10: note: ‘__pyx_v_sin’ was declared here
2020-04-06T01:05:33,960      double __pyx_v_sin;
2020-04-06T01:05:33,960             ^~~~~~~~~~~
2020-04-06T01:05:33,961   maicos/lib/sfactor.c:2867:25: warning: ‘__pyx_v_cos’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2020-04-06T01:05:33,961                    #pragma omp parallel reduction(+:__pyx_v_cos) reduction(+:__pyx_v_sin) private(__pyx_t_18, __pyx_t_19, __pyx_t_20, __pyx_t_21, __pyx_t_22, __pyx_t_23, __pyx_t_24, __pyx_t_25, __pyx_t_26, __pyx_t_27, __pyx_t_28, __pyx_t_29, __pyx_t_30, __pyx_t_31, __pyx_t_32, __pyx_t_33, __pyx_t_34, __pyx_t_35, __pyx_t_36, __pyx_t_37, __pyx_t_38, __pyx_t_39, __pyx_t_40, __pyx_t_41, __pyx_t_42, __pyx_t_43, __pyx_t_44, __pyx_t_45)
2020-04-06T01:05:33,961                            ^~~
2020-04-06T01:05:33,962   maicos/lib/sfactor.c:2554:10: note: ‘__pyx_v_cos’ was declared here
2020-04-06T01:05:33,962      double __pyx_v_cos;
2020-04-06T01:05:33,962             ^~~~~~~~~~~
2020-04-06T01:05:38,621   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.7/maicos/lib/sfactor.o -lm -o build/lib.linux-armv7l-3.7/maicos/lib/sfactor.cpython-37m-arm-linux-gnueabihf.so -fopenmp
2020-04-06T01:05:38,953   installing to build/bdist.linux-armv7l/wheel
2020-04-06T01:05:38,954   running install
2020-04-06T01:05:38,957   running install_lib
2020-04-06T01:05:38,964   creating build/bdist.linux-armv7l
2020-04-06T01:05:38,964   creating build/bdist.linux-armv7l/wheel
2020-04-06T01:05:38,967   creating build/bdist.linux-armv7l/wheel/maicos
2020-04-06T01:05:38,969   copying build/lib.linux-armv7l-3.7/maicos/tables.py -> build/bdist.linux-armv7l/wheel/maicos
2020-04-06T01:05:38,972   copying build/lib.linux-armv7l-3.7/maicos/utils.py -> build/bdist.linux-armv7l/wheel/maicos
2020-04-06T01:05:38,976   copying build/lib.linux-armv7l-3.7/maicos/__main__.py -> build/bdist.linux-armv7l/wheel/maicos
2020-04-06T01:05:38,980   copying build/lib.linux-armv7l-3.7/maicos/decorators.py -> build/bdist.linux-armv7l/wheel/maicos
2020-04-06T01:05:38,983   creating build/bdist.linux-armv7l/wheel/maicos/modules
2020-04-06T01:05:38,985   copying build/lib.linux-armv7l-3.7/maicos/modules/base.py -> build/bdist.linux-armv7l/wheel/maicos/modules
2020-04-06T01:05:38,989   copying build/lib.linux-armv7l-3.7/maicos/modules/timeseries.py -> build/bdist.linux-armv7l/wheel/maicos/modules
2020-04-06T01:05:38,993   copying build/lib.linux-armv7l-3.7/maicos/modules/transport.py -> build/bdist.linux-armv7l/wheel/maicos/modules
2020-04-06T01:05:38,997   copying build/lib.linux-armv7l-3.7/maicos/modules/density.py -> build/bdist.linux-armv7l/wheel/maicos/modules
2020-04-06T01:05:39,003   copying build/lib.linux-armv7l-3.7/maicos/modules/epsilon.py -> build/bdist.linux-armv7l/wheel/maicos/modules
2020-04-06T01:05:39,011   copying build/lib.linux-armv7l-3.7/maicos/modules/__init__.py -> build/bdist.linux-armv7l/wheel/maicos/modules
2020-04-06T01:05:39,015   copying build/lib.linux-armv7l-3.7/maicos/modules/structure.py -> build/bdist.linux-armv7l/wheel/maicos/modules
2020-04-06T01:05:39,022   creating build/bdist.linux-armv7l/wheel/maicos/share
2020-04-06T01:05:39,023   copying build/lib.linux-armv7l-3.7/maicos/share/sfactor.dat -> build/bdist.linux-armv7l/wheel/maicos/share
2020-04-06T01:05:39,027   copying build/lib.linux-armv7l-3.7/maicos/share/maicos-completion.bash -> build/bdist.linux-armv7l/wheel/maicos/share
2020-04-06T01:05:39,030   copying build/lib.linux-armv7l-3.7/maicos/share/atomtypes.dat -> build/bdist.linux-armv7l/wheel/maicos/share
2020-04-06T01:05:39,034   creating build/bdist.linux-armv7l/wheel/maicos/lib
2020-04-06T01:05:39,036   copying build/lib.linux-armv7l-3.7/maicos/lib/sfactor.pyx -> build/bdist.linux-armv7l/wheel/maicos/lib
2020-04-06T01:05:39,039   copying build/lib.linux-armv7l-3.7/maicos/lib/sfactor.c -> build/bdist.linux-armv7l/wheel/maicos/lib
2020-04-06T01:05:39,089   copying build/lib.linux-armv7l-3.7/maicos/lib/sfactor.cpython-37m-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/maicos/lib
2020-04-06T01:05:39,133   copying build/lib.linux-armv7l-3.7/maicos/arg_completion.py -> build/bdist.linux-armv7l/wheel/maicos
2020-04-06T01:05:39,137   copying build/lib.linux-armv7l-3.7/maicos/__init__.py -> build/bdist.linux-armv7l/wheel/maicos
2020-04-06T01:05:39,139   running install_egg_info
2020-04-06T01:05:39,169   Copying maicos.egg-info to build/bdist.linux-armv7l/wheel/maicos-0.2-py3.7.egg-info
2020-04-06T01:05:39,197   running install_scripts
2020-04-06T01:05:39,337   creating build/bdist.linux-armv7l/wheel/maicos-0.2.dist-info/WHEEL
2020-04-06T01:05:39,341   creating '/tmp/pip-wheel-29bzygo8/maicos-0.2-cp37-cp37m-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2020-04-06T01:05:39,345   adding 'maicos/__init__.py'
2020-04-06T01:05:39,348   adding 'maicos/__main__.py'
2020-04-06T01:05:39,351   adding 'maicos/arg_completion.py'
2020-04-06T01:05:39,353   adding 'maicos/decorators.py'
2020-04-06T01:05:39,355   adding 'maicos/tables.py'
2020-04-06T01:05:39,357   adding 'maicos/utils.py'
2020-04-06T01:05:39,463   adding 'maicos/lib/sfactor.c'
2020-04-06T01:05:39,738   adding 'maicos/lib/sfactor.cpython-37m-arm-linux-gnueabihf.so'
2020-04-06T01:05:39,750   adding 'maicos/lib/sfactor.pyx'
2020-04-06T01:05:39,753   adding 'maicos/modules/__init__.py'
2020-04-06T01:05:39,755   adding 'maicos/modules/base.py'
2020-04-06T01:05:39,759   adding 'maicos/modules/density.py'
2020-04-06T01:05:39,767   adding 'maicos/modules/epsilon.py'
2020-04-06T01:05:39,772   adding 'maicos/modules/structure.py'
2020-04-06T01:05:39,775   adding 'maicos/modules/timeseries.py'
2020-04-06T01:05:39,778   adding 'maicos/modules/transport.py'
2020-04-06T01:05:39,910   adding 'maicos/share/atomtypes.dat'
2020-04-06T01:05:39,915   adding 'maicos/share/maicos-completion.bash'
2020-04-06T01:05:39,919   adding 'maicos/share/sfactor.dat'
2020-04-06T01:05:40,172   adding 'maicos-0.2.dist-info/METADATA'
2020-04-06T01:05:40,174   adding 'maicos-0.2.dist-info/WHEEL'
2020-04-06T01:05:40,177   adding 'maicos-0.2.dist-info/entry_points.txt'
2020-04-06T01:05:40,179   adding 'maicos-0.2.dist-info/top_level.txt'
2020-04-06T01:05:40,181   adding 'maicos-0.2.dist-info/RECORD'
2020-04-06T01:05:40,440   removing build/bdist.linux-armv7l/wheel
2020-04-06T01:05:40,662   Building wheel for maicos (setup.py): finished with status 'done'
2020-04-06T01:05:40,674   Created wheel for maicos: filename=maicos-0.2-cp37-cp37m-linux_armv7l.whl size=527867 sha256=ad6062225d4cb2850018fc837b12b619b13b3e261b84e05764d2bee94dee1e8a
2020-04-06T01:05:40,674   Stored in directory: /tmp/pip-ephem-wheel-cache-jtgfgdj8/wheels/1e/dc/e9/01d4f257524c78fc80f08c7d95b8b8b1c9b183fbadc18e8939
2020-04-06T01:05:40,677 Successfully built maicos
2020-04-06T01:05:40,844 Cleaning up...
2020-04-06T01:05:40,845   Removing source in /tmp/pip-wheel-dlso30_l/maicos
2020-04-06T01:05:40,898 Removed build tracker: '/tmp/pip-req-tracker-7g0uu_9x'