2020-04-09T10:08:48,155 Created temporary directory: /tmp/pip-ephem-wheel-cache-v7rnu3sk 2020-04-09T10:08:48,159 Created temporary directory: /tmp/pip-req-tracker-eh7xpjc_ 2020-04-09T10:08:48,159 Initialized build tracking at /tmp/pip-req-tracker-eh7xpjc_ 2020-04-09T10:08:48,160 Created build tracker: /tmp/pip-req-tracker-eh7xpjc_ 2020-04-09T10:08:48,160 Entered build tracker: /tmp/pip-req-tracker-eh7xpjc_ 2020-04-09T10:08:48,161 Created temporary directory: /tmp/pip-wheel-9bjbi58w 2020-04-09T10:08:48,166 1 location(s) to search for versions of nifstd-tools: 2020-04-09T10:08:48,166 * https://pypi.org/simple/nifstd-tools/ 2020-04-09T10:08:48,167 Fetching project page and analyzing links: https://pypi.org/simple/nifstd-tools/ 2020-04-09T10:08:48,167 Getting page https://pypi.org/simple/nifstd-tools/ 2020-04-09T10:08:48,170 Found index url https://pypi.org/simple 2020-04-09T10:08:48,172 Getting credentials from keyring for https://pypi.org/simple 2020-04-09T10:08:48,173 Getting credentials from keyring for pypi.org 2020-04-09T10:08:48,359 Found link https://files.pythonhosted.org/packages/94/87/4b2523af34e758ce739068375e98cdedb16976ab98b3a1943fb8d9398984/nifstd-tools-0.0.1.tar.gz#sha256=85df3e2579ee62f0880976408ad02c3c53d0529ef1136d2124af21718fc01304 (from https://pypi.org/simple/nifstd-tools/) (requires-python:>=3.6), version: 0.0.1 2020-04-09T10:08:48,360 Found link https://files.pythonhosted.org/packages/93/37/4e3fa9fa870edef6338fb987320b0cd8e73816bdd32aa84dbbefabb37eac/nifstd-tools-0.0.2.tar.gz#sha256=f2c3c15c15e048de8979c9fd18021d317670f1097cebd49175e4abafb66c513b (from https://pypi.org/simple/nifstd-tools/) (requires-python:>=3.6), version: 0.0.2 2020-04-09T10:08:48,361 Skipping link: No binaries permitted for nifstd-tools: https://files.pythonhosted.org/packages/dc/a3/3bbb7dff4cb86f5189078ecc09789e6ae2aedf313271e0baafbe3c99d34c/nifstd_tools-0.0.2-py2.py3-none-any.whl#sha256=92ac8e94d71917720a1c670a6e79a4b5cdaca8ec7f5bbc0a63cc8222c28a67cf (from https://pypi.org/simple/nifstd-tools/) (requires-python:>=3.6) 2020-04-09T10:08:48,362 Found link https://files.pythonhosted.org/packages/63/f4/a8710a73af46fc9d31ed1f017228ee441a5f299f0c12b0ea867f9198e95d/nifstd-tools-0.0.3.tar.gz#sha256=7f7ed8ecc66d072bf99c114ba8715fd3f8ba473557bc645ea94bba6333a95ebb (from https://pypi.org/simple/nifstd-tools/) (requires-python:>=3.6), version: 0.0.3 2020-04-09T10:08:48,362 Skipping link: No binaries permitted for nifstd-tools: https://files.pythonhosted.org/packages/87/ee/f948a76f0b3f4c51c6e54b542a2685dc33deafebbed286f6a310ebb788c5/nifstd_tools-0.0.3-py2.py3-none-any.whl#sha256=1aef5fb53f26460d8b3b3843fe81d9ee366aa109690c4d349ce68249e50be0b7 (from https://pypi.org/simple/nifstd-tools/) (requires-python:>=3.6) 2020-04-09T10:08:48,369 Given no hashes to check 1 links for project 'nifstd-tools': discarding no candidates 2020-04-09T10:08:48,370 Using version 0.0.3 (newest of versions: 0.0.3) 2020-04-09T10:08:48,374 Collecting nifstd-tools==0.0.3 2020-04-09T10:08:48,377 Created temporary directory: /tmp/pip-unpack-7iwmt6ia 2020-04-09T10:08:48,379 Getting credentials from keyring for files.pythonhosted.org 2020-04-09T10:08:48,774 Downloading nifstd-tools-0.0.3.tar.gz (135 kB) 2020-04-09T10:08:49,032 Added nifstd-tools==0.0.3 from https://files.pythonhosted.org/packages/63/f4/a8710a73af46fc9d31ed1f017228ee441a5f299f0c12b0ea867f9198e95d/nifstd-tools-0.0.3.tar.gz#sha256=7f7ed8ecc66d072bf99c114ba8715fd3f8ba473557bc645ea94bba6333a95ebb to build tracker '/tmp/pip-req-tracker-eh7xpjc_' 2020-04-09T10:08:49,034 Running setup.py (path:/tmp/pip-wheel-9bjbi58w/nifstd-tools/setup.py) egg_info for package nifstd-tools 2020-04-09T10:08:49,036 Running command python setup.py egg_info 2020-04-09T10:08:50,646 running egg_info 2020-04-09T10:08:50,650 creating /tmp/pip-wheel-9bjbi58w/nifstd-tools/pip-egg-info/nifstd_tools.egg-info 2020-04-09T10:08:50,651 writing /tmp/pip-wheel-9bjbi58w/nifstd-tools/pip-egg-info/nifstd_tools.egg-info/PKG-INFO 2020-04-09T10:08:50,655 writing dependency_links to /tmp/pip-wheel-9bjbi58w/nifstd-tools/pip-egg-info/nifstd_tools.egg-info/dependency_links.txt 2020-04-09T10:08:50,658 writing entry points to /tmp/pip-wheel-9bjbi58w/nifstd-tools/pip-egg-info/nifstd_tools.egg-info/entry_points.txt 2020-04-09T10:08:50,661 writing requirements to /tmp/pip-wheel-9bjbi58w/nifstd-tools/pip-egg-info/nifstd_tools.egg-info/requires.txt 2020-04-09T10:08:50,663 writing top-level names to /tmp/pip-wheel-9bjbi58w/nifstd-tools/pip-egg-info/nifstd_tools.egg-info/top_level.txt 2020-04-09T10:08:50,666 writing manifest file '/tmp/pip-wheel-9bjbi58w/nifstd-tools/pip-egg-info/nifstd_tools.egg-info/SOURCES.txt' 2020-04-09T10:08:50,933 reading manifest file '/tmp/pip-wheel-9bjbi58w/nifstd-tools/pip-egg-info/nifstd_tools.egg-info/SOURCES.txt' 2020-04-09T10:08:50,941 writing manifest file '/tmp/pip-wheel-9bjbi58w/nifstd-tools/pip-egg-info/nifstd_tools.egg-info/SOURCES.txt' 2020-04-09T10:08:51,051 Source in /tmp/pip-wheel-9bjbi58w/nifstd-tools has version 0.0.3, which satisfies requirement nifstd-tools==0.0.3 from https://files.pythonhosted.org/packages/63/f4/a8710a73af46fc9d31ed1f017228ee441a5f299f0c12b0ea867f9198e95d/nifstd-tools-0.0.3.tar.gz#sha256=7f7ed8ecc66d072bf99c114ba8715fd3f8ba473557bc645ea94bba6333a95ebb 2020-04-09T10:08:51,052 Removed nifstd-tools==0.0.3 from https://files.pythonhosted.org/packages/63/f4/a8710a73af46fc9d31ed1f017228ee441a5f299f0c12b0ea867f9198e95d/nifstd-tools-0.0.3.tar.gz#sha256=7f7ed8ecc66d072bf99c114ba8715fd3f8ba473557bc645ea94bba6333a95ebb from build tracker '/tmp/pip-req-tracker-eh7xpjc_' 2020-04-09T10:08:51,056 Building wheels for collected packages: nifstd-tools 2020-04-09T10:08:51,063 Created temporary directory: /tmp/pip-wheel-7e2lglh6 2020-04-09T10:08:51,063 Building wheel for nifstd-tools (setup.py): started 2020-04-09T10:08:51,064 Destination directory: /tmp/pip-wheel-7e2lglh6 2020-04-09T10:08:51,064 Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-9bjbi58w/nifstd-tools/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-9bjbi58w/nifstd-tools/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-7e2lglh6 2020-04-09T10:08:52,705 running bdist_wheel 2020-04-09T10:08:52,716 running build 2020-04-09T10:08:52,717 running build_py 2020-04-09T10:08:52,976 creating build 2020-04-09T10:08:52,977 creating build/lib 2020-04-09T10:08:52,978 creating build/lib/nifstd_tools 2020-04-09T10:08:52,980 copying nifstd_tools/mapnlxilx.py -> build/lib/nifstd_tools 2020-04-09T10:08:52,985 copying nifstd_tools/fragment_map.py -> build/lib/nifstd_tools 2020-04-09T10:08:52,988 copying nifstd_tools/simplify.py -> build/lib/nifstd_tools 2020-04-09T10:08:52,992 copying nifstd_tools/ksdesc_bridge.py -> build/lib/nifstd_tools 2020-04-09T10:08:52,994 copying nifstd_tools/nifgafix.py -> build/lib/nifstd_tools 2020-04-09T10:08:52,997 copying nifstd_tools/ontree.py -> build/lib/nifstd_tools 2020-04-09T10:08:53,002 copying nifstd_tools/gen_nat_models.py -> build/lib/nifstd_tools 2020-04-09T10:08:53,005 copying nifstd_tools/slimgen.py -> build/lib/nifstd_tools 2020-04-09T10:08:53,009 copying nifstd_tools/extracting_pmids_from_neurolex.py -> build/lib/nifstd_tools 2020-04-09T10:08:53,012 copying nifstd_tools/allen_transgenic_lines.py -> build/lib/nifstd_tools 2020-04-09T10:08:53,015 copying nifstd_tools/utils.py -> build/lib/nifstd_tools 2020-04-09T10:08:53,018 copying nifstd_tools/docs.py -> build/lib/nifstd_tools 2020-04-09T10:08:53,023 copying nifstd_tools/hbp_parc_output.py -> build/lib/nifstd_tools 2020-04-09T10:08:53,027 copying nifstd_tools/scr_sync.py -> build/lib/nifstd_tools 2020-04-09T10:08:53,036 copying nifstd_tools/dumpnlx.py -> build/lib/nifstd_tools 2020-04-09T10:08:53,039 copying nifstd_tools/chebi_bridge.py -> build/lib/nifstd_tools 2020-04-09T10:08:53,043 copying nifstd_tools/ncbigene_slim.py -> build/lib/nifstd_tools 2020-04-09T10:08:53,047 copying nifstd_tools/sheets_sparc.py -> build/lib/nifstd_tools 2020-04-09T10:08:53,052 copying nifstd_tools/hbp_merge.py -> build/lib/nifstd_tools 2020-04-09T10:08:53,058 copying nifstd_tools/aba_uberon.py -> build/lib/nifstd_tools 2020-04-09T10:08:53,064 copying nifstd_tools/nif_cell.py -> build/lib/nifstd_tools 2020-04-09T10:08:53,071 copying nifstd_tools/ontree_server.py -> build/lib/nifstd_tools 2020-04-09T10:08:53,075 copying nifstd_tools/__init__.py -> build/lib/nifstd_tools 2020-04-09T10:08:53,078 copying nifstd_tools/chebi_slim.py -> build/lib/nifstd_tools 2020-04-09T10:08:53,085 running build_scripts 2020-04-09T10:08:53,086 creating build/scripts-3.7 2020-04-09T10:08:53,089 copying bin/ttlcmp -> build/scripts-3.7 2020-04-09T10:08:53,098 installing to build/bdist.linux-armv7l/wheel 2020-04-09T10:08:53,098 running install 2020-04-09T10:08:53,101 running install_lib 2020-04-09T10:08:53,107 creating build/bdist.linux-armv7l 2020-04-09T10:08:53,109 creating build/bdist.linux-armv7l/wheel 2020-04-09T10:08:53,112 creating build/bdist.linux-armv7l/wheel/nifstd_tools 2020-04-09T10:08:53,115 copying build/lib/nifstd_tools/mapnlxilx.py -> build/bdist.linux-armv7l/wheel/nifstd_tools 2020-04-09T10:08:53,120 copying build/lib/nifstd_tools/fragment_map.py -> build/bdist.linux-armv7l/wheel/nifstd_tools 2020-04-09T10:08:53,124 copying build/lib/nifstd_tools/simplify.py -> build/bdist.linux-armv7l/wheel/nifstd_tools 2020-04-09T10:08:53,128 copying build/lib/nifstd_tools/ksdesc_bridge.py -> build/bdist.linux-armv7l/wheel/nifstd_tools 2020-04-09T10:08:53,132 copying build/lib/nifstd_tools/nifgafix.py -> build/bdist.linux-armv7l/wheel/nifstd_tools 2020-04-09T10:08:53,136 copying build/lib/nifstd_tools/ontree.py -> build/bdist.linux-armv7l/wheel/nifstd_tools 2020-04-09T10:08:53,142 copying build/lib/nifstd_tools/gen_nat_models.py -> build/bdist.linux-armv7l/wheel/nifstd_tools 2020-04-09T10:08:53,145 copying build/lib/nifstd_tools/slimgen.py -> build/bdist.linux-armv7l/wheel/nifstd_tools 2020-04-09T10:08:53,149 copying build/lib/nifstd_tools/extracting_pmids_from_neurolex.py -> build/bdist.linux-armv7l/wheel/nifstd_tools 2020-04-09T10:08:53,156 copying build/lib/nifstd_tools/allen_transgenic_lines.py -> build/bdist.linux-armv7l/wheel/nifstd_tools 2020-04-09T10:08:53,164 copying build/lib/nifstd_tools/utils.py -> build/bdist.linux-armv7l/wheel/nifstd_tools 2020-04-09T10:08:53,170 copying build/lib/nifstd_tools/docs.py -> build/bdist.linux-armv7l/wheel/nifstd_tools 2020-04-09T10:08:53,177 copying build/lib/nifstd_tools/hbp_parc_output.py -> build/bdist.linux-armv7l/wheel/nifstd_tools 2020-04-09T10:08:53,181 copying build/lib/nifstd_tools/scr_sync.py -> build/bdist.linux-armv7l/wheel/nifstd_tools 2020-04-09T10:08:53,185 copying build/lib/nifstd_tools/dumpnlx.py -> build/bdist.linux-armv7l/wheel/nifstd_tools 2020-04-09T10:08:53,189 copying build/lib/nifstd_tools/chebi_bridge.py -> build/bdist.linux-armv7l/wheel/nifstd_tools 2020-04-09T10:08:53,194 copying build/lib/nifstd_tools/ncbigene_slim.py -> build/bdist.linux-armv7l/wheel/nifstd_tools 2020-04-09T10:08:53,197 copying build/lib/nifstd_tools/sheets_sparc.py -> build/bdist.linux-armv7l/wheel/nifstd_tools 2020-04-09T10:08:53,202 copying build/lib/nifstd_tools/hbp_merge.py -> build/bdist.linux-armv7l/wheel/nifstd_tools 2020-04-09T10:08:53,206 copying build/lib/nifstd_tools/aba_uberon.py -> build/bdist.linux-armv7l/wheel/nifstd_tools 2020-04-09T10:08:53,210 copying build/lib/nifstd_tools/nif_cell.py -> build/bdist.linux-armv7l/wheel/nifstd_tools 2020-04-09T10:08:53,214 copying build/lib/nifstd_tools/ontree_server.py -> build/bdist.linux-armv7l/wheel/nifstd_tools 2020-04-09T10:08:53,217 copying build/lib/nifstd_tools/__init__.py -> build/bdist.linux-armv7l/wheel/nifstd_tools 2020-04-09T10:08:53,221 copying build/lib/nifstd_tools/chebi_slim.py -> build/bdist.linux-armv7l/wheel/nifstd_tools 2020-04-09T10:08:53,225 running install_data 2020-04-09T10:08:53,232 creating build/bdist.linux-armv7l/wheel/nifstd_tools-0.0.3.data 2020-04-09T10:08:53,233 creating build/bdist.linux-armv7l/wheel/nifstd_tools-0.0.3.data/data 2020-04-09T10:08:53,236 creating build/bdist.linux-armv7l/wheel/nifstd_tools-0.0.3.data/data/share 2020-04-09T10:08:53,238 creating build/bdist.linux-armv7l/wheel/nifstd_tools-0.0.3.data/data/share/nifstd 2020-04-09T10:08:53,239 creating build/bdist.linux-armv7l/wheel/nifstd_tools-0.0.3.data/data/share/nifstd/resources 2020-04-09T10:08:53,241 creating build/bdist.linux-armv7l/wheel/nifstd_tools-0.0.3.data/data/share/nifstd/resources/sparc_term_versions 2020-04-09T10:08:53,244 copying resources/sparc_term_versions/sparc_terms2-mod.txt -> build/bdist.linux-armv7l/wheel/nifstd_tools-0.0.3.data/data/share/nifstd/resources/sparc_term_versions/ 2020-04-09T10:08:53,267 running install_egg_info 2020-04-09T10:08:53,309 running egg_info 2020-04-09T10:08:53,311 writing nifstd_tools.egg-info/PKG-INFO 2020-04-09T10:08:53,315 writing dependency_links to nifstd_tools.egg-info/dependency_links.txt 2020-04-09T10:08:53,318 writing entry points to nifstd_tools.egg-info/entry_points.txt 2020-04-09T10:08:53,321 writing requirements to nifstd_tools.egg-info/requires.txt 2020-04-09T10:08:53,323 writing top-level names to nifstd_tools.egg-info/top_level.txt 2020-04-09T10:08:53,333 reading manifest file 'nifstd_tools.egg-info/SOURCES.txt' 2020-04-09T10:08:53,344 writing manifest file 'nifstd_tools.egg-info/SOURCES.txt' 2020-04-09T10:08:53,347 Copying nifstd_tools.egg-info to build/bdist.linux-armv7l/wheel/nifstd_tools-0.0.3-py3.7.egg-info 2020-04-09T10:08:53,368 running install_scripts 2020-04-09T10:08:53,453 creating build/bdist.linux-armv7l/wheel/nifstd_tools-0.0.3.data/scripts 2020-04-09T10:08:53,455 copying build/scripts-3.7/ttlcmp -> build/bdist.linux-armv7l/wheel/nifstd_tools-0.0.3.data/scripts 2020-04-09T10:08:53,459 changing mode of build/bdist.linux-armv7l/wheel/nifstd_tools-0.0.3.data/scripts/ttlcmp to 755 2020-04-09T10:08:53,517 adding license file "LICENSE" (matched pattern "LICEN[CS]E*") 2020-04-09T10:08:53,527 creating build/bdist.linux-armv7l/wheel/nifstd_tools-0.0.3.dist-info/WHEEL 2020-04-09T10:08:53,533 creating '/tmp/pip-wheel-7e2lglh6/nifstd_tools-0.0.3-py2.py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2020-04-09T10:08:53,537 adding 'nifstd_tools/__init__.py' 2020-04-09T10:08:53,541 adding 'nifstd_tools/aba_uberon.py' 2020-04-09T10:08:53,544 adding 'nifstd_tools/allen_transgenic_lines.py' 2020-04-09T10:08:53,548 adding 'nifstd_tools/chebi_bridge.py' 2020-04-09T10:08:53,552 adding 'nifstd_tools/chebi_slim.py' 2020-04-09T10:08:53,559 adding 'nifstd_tools/docs.py' 2020-04-09T10:08:53,562 adding 'nifstd_tools/dumpnlx.py' 2020-04-09T10:08:53,566 adding 'nifstd_tools/extracting_pmids_from_neurolex.py' 2020-04-09T10:08:53,568 adding 'nifstd_tools/fragment_map.py' 2020-04-09T10:08:53,571 adding 'nifstd_tools/gen_nat_models.py' 2020-04-09T10:08:53,574 adding 'nifstd_tools/hbp_merge.py' 2020-04-09T10:08:53,577 adding 'nifstd_tools/hbp_parc_output.py' 2020-04-09T10:08:53,580 adding 'nifstd_tools/ksdesc_bridge.py' 2020-04-09T10:08:53,585 adding 'nifstd_tools/mapnlxilx.py' 2020-04-09T10:08:53,588 adding 'nifstd_tools/ncbigene_slim.py' 2020-04-09T10:08:53,591 adding 'nifstd_tools/nif_cell.py' 2020-04-09T10:08:53,594 adding 'nifstd_tools/nifgafix.py' 2020-04-09T10:08:53,601 adding 'nifstd_tools/ontree.py' 2020-04-09T10:08:53,605 adding 'nifstd_tools/ontree_server.py' 2020-04-09T10:08:53,609 adding 'nifstd_tools/scr_sync.py' 2020-04-09T10:08:53,614 adding 'nifstd_tools/sheets_sparc.py' 2020-04-09T10:08:53,617 adding 'nifstd_tools/simplify.py' 2020-04-09T10:08:53,620 adding 'nifstd_tools/slimgen.py' 2020-04-09T10:08:53,623 adding 'nifstd_tools/utils.py' 2020-04-09T10:08:53,684 adding 'nifstd_tools-0.0.3.data/data/share/nifstd/resources/sparc_term_versions/sparc_terms2-mod.txt' 2020-04-09T10:08:53,692 adding 'nifstd_tools-0.0.3.data/scripts/ttlcmp' 2020-04-09T10:08:53,696 adding 'nifstd_tools-0.0.3.dist-info/LICENSE' 2020-04-09T10:08:53,699 adding 'nifstd_tools-0.0.3.dist-info/METADATA' 2020-04-09T10:08:53,701 adding 'nifstd_tools-0.0.3.dist-info/WHEEL' 2020-04-09T10:08:53,703 adding 'nifstd_tools-0.0.3.dist-info/entry_points.txt' 2020-04-09T10:08:53,705 adding 'nifstd_tools-0.0.3.dist-info/top_level.txt' 2020-04-09T10:08:53,707 adding 'nifstd_tools-0.0.3.dist-info/RECORD' 2020-04-09T10:08:53,715 removing build/bdist.linux-armv7l/wheel 2020-04-09T10:08:53,868 Building wheel for nifstd-tools (setup.py): finished with status 'done' 2020-04-09T10:08:53,873 Created wheel for nifstd-tools: filename=nifstd_tools-0.0.3-py2.py3-none-any.whl size=141934 sha256=eae3ea80c0e3a6e8c50b0d89cb9581ad4acee0f2f3b6b0aeedf0a18ffb266dda 2020-04-09T10:08:53,874 Stored in directory: /tmp/pip-ephem-wheel-cache-v7rnu3sk/wheels/2c/c7/fe/60064467c1f6eceeac7cbef54cba2e2e7002cac97bd0184551 2020-04-09T10:08:53,877 Successfully built nifstd-tools 2020-04-09T10:08:53,894 Cleaning up... 2020-04-09T10:08:53,895 Removing source in /tmp/pip-wheel-9bjbi58w/nifstd-tools 2020-04-09T10:08:53,955 Removed build tracker: '/tmp/pip-req-tracker-eh7xpjc_'