2020-04-16T11:49:39 Created temporary directory: /tmp/pip-ephem-wheel-cache-lqkttz3e
2020-04-16T11:49:39 Created temporary directory: /tmp/pip-req-tracker-0hwmvthd
2020-04-16T11:49:39 Created requirements tracker '/tmp/pip-req-tracker-0hwmvthd'
2020-04-16T11:49:39 Created temporary directory: /tmp/pip-wheel-7evgc00i
2020-04-16T11:49:39 Collecting scipion-em-eman2==1.0.7
2020-04-16T11:49:39   1 location(s) to search for versions of scipion-em-eman2:
2020-04-16T11:49:39   * https://pypi.org/simple/scipion-em-eman2/
2020-04-16T11:49:39   Getting page https://pypi.org/simple/scipion-em-eman2/
2020-04-16T11:49:39   Analyzing links from page https://pypi.org/simple/scipion-em-eman2/
2020-04-16T11:49:39     Found link https://files.pythonhosted.org/packages/a7/0f/7d43b6c07af0e5fa106f0b1fc01de1a6a99e6232a0436fcd20abffe580b5/scipion-em-eman2-1.0.0.tar.gz#sha256=4d20f96f49786911b7d7ef56ff2f7a82ec7f923f3db64d3f00a784bf647353d6 (from https://pypi.org/simple/scipion-em-eman2/), version: 1.0.0
2020-04-16T11:49:39     Found link https://files.pythonhosted.org/packages/80/b7/9196fe07a94d2a0fa1a791afd66470766a02cace55303598b9afd5e67b04/scipion-em-eman2-1.0.1.tar.gz#sha256=ac698992904e0677790ab735d662185742cc4902fd0fd8e246640e4e898520b7 (from https://pypi.org/simple/scipion-em-eman2/), version: 1.0.1
2020-04-16T11:49:39     Found link https://files.pythonhosted.org/packages/00/80/5ab64971bf1409b607df23af77185cfe2a05a9d274f3104d83d1a21fbd62/scipion-em-eman2-1.0.2.tar.gz#sha256=6bea98c34bebbb95ddd7e16bf347aac6f6b1bd13298677ec792c0eb829f1c475 (from https://pypi.org/simple/scipion-em-eman2/), version: 1.0.2
2020-04-16T11:49:39     Found link https://files.pythonhosted.org/packages/4b/76/6cb8d5d87de446dec6cc0cb8ba31c717d43f3e1b43b3299d22791a3066c9/scipion-em-eman2-1.0.3.tar.gz#sha256=1066b6c6bca5c5d36179df756e0374c3e82943b516260560129ecbffe3f8c05c (from https://pypi.org/simple/scipion-em-eman2/), version: 1.0.3
2020-04-16T11:49:39     Found link https://files.pythonhosted.org/packages/0a/0d/25e486c760163db74249637611f8670af033a8897027f032e1630d1f8bf4/scipion-em-eman2-1.0.4.tar.gz#sha256=c0ced64267050009ab303e20c4b6497a49c488eb67e75519da851db3ec054ed5 (from https://pypi.org/simple/scipion-em-eman2/), version: 1.0.4
2020-04-16T11:49:39     Found link https://files.pythonhosted.org/packages/e3/5a/2192c7e097a8db09d3ea10c795b2e220ea059882d1a918dd84aff6439d79/scipion-em-eman2-1.0.5.tar.gz#sha256=98c2eb48fd8c6ffa1d4fdf281076e63591e4106074872bb18bd53abec3fbdfd6 (from https://pypi.org/simple/scipion-em-eman2/), version: 1.0.5
2020-04-16T11:49:39     Found link https://files.pythonhosted.org/packages/65/16/5e861f129229ffeeea4dad00f82f6af80c39a6f0ee6379f3879af1d3104d/scipion-em-eman2-1.0.6.tar.gz#sha256=8741612d171a3f2569a6db175e7c10d416b3ddf7b5d4511200bf33434aea34e6 (from https://pypi.org/simple/scipion-em-eman2/), version: 1.0.6
2020-04-16T11:49:39     Found link https://files.pythonhosted.org/packages/66/9a/cbb2f0f516e8efeafd12301f8ff597dc1d28e2969d4628f3baa7ed89f51a/scipion-em-eman2-1.0.7.tar.gz#sha256=a25d3e016ba6c445d13a03ba197a776b45ee98aaf342465cbbbfd34c8f93b20b (from https://pypi.org/simple/scipion-em-eman2/), version: 1.0.7
2020-04-16T11:49:39   Using version 1.0.7 (newest of versions: 1.0.7)
2020-04-16T11:49:39   Created temporary directory: /tmp/pip-unpack-z6c0z9b3
2020-04-16T11:49:39   Downloading https://files.pythonhosted.org/packages/66/9a/cbb2f0f516e8efeafd12301f8ff597dc1d28e2969d4628f3baa7ed89f51a/scipion-em-eman2-1.0.7.tar.gz (113kB)
2020-04-16T11:49:39   Downloading from URL https://files.pythonhosted.org/packages/66/9a/cbb2f0f516e8efeafd12301f8ff597dc1d28e2969d4628f3baa7ed89f51a/scipion-em-eman2-1.0.7.tar.gz#sha256=a25d3e016ba6c445d13a03ba197a776b45ee98aaf342465cbbbfd34c8f93b20b (from https://pypi.org/simple/scipion-em-eman2/)
2020-04-16T11:49:40   Added scipion-em-eman2==1.0.7 from https://files.pythonhosted.org/packages/66/9a/cbb2f0f516e8efeafd12301f8ff597dc1d28e2969d4628f3baa7ed89f51a/scipion-em-eman2-1.0.7.tar.gz#sha256=a25d3e016ba6c445d13a03ba197a776b45ee98aaf342465cbbbfd34c8f93b20b to build tracker '/tmp/pip-req-tracker-0hwmvthd'
2020-04-16T11:49:40     Running setup.py (path:/tmp/pip-wheel-7evgc00i/scipion-em-eman2/setup.py) egg_info for package scipion-em-eman2
2020-04-16T11:49:40     Running command python setup.py egg_info
2020-04-16T11:49:41     running egg_info
2020-04-16T11:49:41     creating pip-egg-info/scipion_em_eman2.egg-info
2020-04-16T11:49:41     writing top-level names to pip-egg-info/scipion_em_eman2.egg-info/top_level.txt
2020-04-16T11:49:42     writing pip-egg-info/scipion_em_eman2.egg-info/PKG-INFO
2020-04-16T11:49:42     writing requirements to pip-egg-info/scipion_em_eman2.egg-info/requires.txt
2020-04-16T11:49:42     writing entry points to pip-egg-info/scipion_em_eman2.egg-info/entry_points.txt
2020-04-16T11:49:42     writing dependency_links to pip-egg-info/scipion_em_eman2.egg-info/dependency_links.txt
2020-04-16T11:49:42     writing manifest file 'pip-egg-info/scipion_em_eman2.egg-info/SOURCES.txt'
2020-04-16T11:49:42     reading manifest file 'pip-egg-info/scipion_em_eman2.egg-info/SOURCES.txt'
2020-04-16T11:49:42     reading manifest template 'MANIFEST.in'
2020-04-16T11:49:42     writing manifest file 'pip-egg-info/scipion_em_eman2.egg-info/SOURCES.txt'
2020-04-16T11:49:42   Source in /tmp/pip-wheel-7evgc00i/scipion-em-eman2 has version 1.0.7, which satisfies requirement scipion-em-eman2==1.0.7 from https://files.pythonhosted.org/packages/66/9a/cbb2f0f516e8efeafd12301f8ff597dc1d28e2969d4628f3baa7ed89f51a/scipion-em-eman2-1.0.7.tar.gz#sha256=a25d3e016ba6c445d13a03ba197a776b45ee98aaf342465cbbbfd34c8f93b20b
2020-04-16T11:49:42   Removed scipion-em-eman2==1.0.7 from https://files.pythonhosted.org/packages/66/9a/cbb2f0f516e8efeafd12301f8ff597dc1d28e2969d4628f3baa7ed89f51a/scipion-em-eman2-1.0.7.tar.gz#sha256=a25d3e016ba6c445d13a03ba197a776b45ee98aaf342465cbbbfd34c8f93b20b from build tracker '/tmp/pip-req-tracker-0hwmvthd'
2020-04-16T11:49:42 Building wheels for collected packages: scipion-em-eman2
2020-04-16T11:49:42   Created temporary directory: /tmp/pip-wheel-0c099c3y
2020-04-16T11:49:42   Building wheel for scipion-em-eman2 (setup.py): started
2020-04-16T11:49:42   Destination directory: /tmp/pip-wheel-0c099c3y
2020-04-16T11:49:42   Running command /usr/bin/python3 -u -c 'import setuptools, tokenize;__file__='"'"'/tmp/pip-wheel-7evgc00i/scipion-em-eman2/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-0c099c3y
2020-04-16T11:49:44   running bdist_wheel
2020-04-16T11:49:44   running build
2020-04-16T11:49:44   running build_py
2020-04-16T11:49:44   creating build
2020-04-16T11:49:44   creating build/lib
2020-04-16T11:49:44   creating build/lib/eman2
2020-04-16T11:49:44   copying eman2/bibtex.py -> build/lib/eman2
2020-04-16T11:49:44   copying eman2/constants.py -> build/lib/eman2
2020-04-16T11:49:44   copying eman2/viewers.py -> build/lib/eman2
2020-04-16T11:49:44   copying eman2/__init__.py -> build/lib/eman2
2020-04-16T11:49:44   copying eman2/e2ih.py -> build/lib/eman2
2020-04-16T11:49:44   copying eman2/e2converter.py -> build/lib/eman2
2020-04-16T11:49:44   copying eman2/wizards.py -> build/lib/eman2
2020-04-16T11:49:44   creating build/lib/eman2/tests
2020-04-16T11:49:44   copying eman2/tests/__init__.py -> build/lib/eman2/tests
2020-04-16T11:49:44   copying eman2/tests/test_protocols_eman.py -> build/lib/eman2/tests
2020-04-16T11:49:44   creating build/lib/eman2/convert
2020-04-16T11:49:44   copying eman2/convert/dataimport.py -> build/lib/eman2/convert
2020-04-16T11:49:44   copying eman2/convert/__init__.py -> build/lib/eman2/convert
2020-04-16T11:49:44   copying eman2/convert/convert.py -> build/lib/eman2/convert
2020-04-16T11:49:44   creating build/lib/eman2/protocols
2020-04-16T11:49:44   copying eman2/protocols/protocol_autopick_sparx.py -> build/lib/eman2/protocols
2020-04-16T11:49:44   copying eman2/protocols/protocol_autopick_boxer.py -> build/lib/eman2/protocols
2020-04-16T11:49:44   copying eman2/protocols/protocol_refineasy.py -> build/lib/eman2/protocols
2020-04-16T11:49:44   copying eman2/protocols/protocol_refine2d_bispec.py -> build/lib/eman2/protocols
2020-04-16T11:49:44   copying eman2/protocols/protocol_ctf.py -> build/lib/eman2/protocols
2020-04-16T11:49:44   copying eman2/protocols/protocol_reconstruct.py -> build/lib/eman2/protocols
2020-04-16T11:49:44   copying eman2/protocols/__init__.py -> build/lib/eman2/protocols
2020-04-16T11:49:44   copying eman2/protocols/protocol_initialmodel_sgd.py -> build/lib/eman2/protocols
2020-04-16T11:49:44   copying eman2/protocols/protocol_boxing.py -> build/lib/eman2/protocols
2020-04-16T11:49:44   copying eman2/protocols/protocol_tiltvalidate.py -> build/lib/eman2/protocols
2020-04-16T11:49:44   copying eman2/protocols/protocol_initialmodel.py -> build/lib/eman2/protocols
2020-04-16T11:49:44   copying eman2/protocols/protocol_refine2d.py -> build/lib/eman2/protocols
2020-04-16T11:49:44   copying eman2/eman2_logo.png -> build/lib/eman2
2020-04-16T11:49:45   copying eman2/protocols.conf -> build/lib/eman2
2020-04-16T11:49:45   installing to build/bdist.linux-armv7l/wheel
2020-04-16T11:49:45   running install
2020-04-16T11:49:45   running install_lib
2020-04-16T11:49:45   creating build/bdist.linux-armv7l
2020-04-16T11:49:45   creating build/bdist.linux-armv7l/wheel
2020-04-16T11:49:45   creating build/bdist.linux-armv7l/wheel/eman2
2020-04-16T11:49:45   creating build/bdist.linux-armv7l/wheel/eman2/tests
2020-04-16T11:49:45   copying build/lib/eman2/tests/__init__.py -> build/bdist.linux-armv7l/wheel/eman2/tests
2020-04-16T11:49:45   copying build/lib/eman2/tests/test_protocols_eman.py -> build/bdist.linux-armv7l/wheel/eman2/tests
2020-04-16T11:49:45   copying build/lib/eman2/bibtex.py -> build/bdist.linux-armv7l/wheel/eman2
2020-04-16T11:49:45   copying build/lib/eman2/constants.py -> build/bdist.linux-armv7l/wheel/eman2
2020-04-16T11:49:45   copying build/lib/eman2/eman2_logo.png -> build/bdist.linux-armv7l/wheel/eman2
2020-04-16T11:49:45   copying build/lib/eman2/viewers.py -> build/bdist.linux-armv7l/wheel/eman2
2020-04-16T11:49:45   copying build/lib/eman2/protocols.conf -> build/bdist.linux-armv7l/wheel/eman2
2020-04-16T11:49:45   copying build/lib/eman2/__init__.py -> build/bdist.linux-armv7l/wheel/eman2
2020-04-16T11:49:45   copying build/lib/eman2/e2ih.py -> build/bdist.linux-armv7l/wheel/eman2
2020-04-16T11:49:45   creating build/bdist.linux-armv7l/wheel/eman2/convert
2020-04-16T11:49:45   copying build/lib/eman2/convert/dataimport.py -> build/bdist.linux-armv7l/wheel/eman2/convert
2020-04-16T11:49:45   copying build/lib/eman2/convert/__init__.py -> build/bdist.linux-armv7l/wheel/eman2/convert
2020-04-16T11:49:45   copying build/lib/eman2/convert/convert.py -> build/bdist.linux-armv7l/wheel/eman2/convert
2020-04-16T11:49:45   creating build/bdist.linux-armv7l/wheel/eman2/protocols
2020-04-16T11:49:45   copying build/lib/eman2/protocols/protocol_autopick_sparx.py -> build/bdist.linux-armv7l/wheel/eman2/protocols
2020-04-16T11:49:45   copying build/lib/eman2/protocols/protocol_autopick_boxer.py -> build/bdist.linux-armv7l/wheel/eman2/protocols
2020-04-16T11:49:45   copying build/lib/eman2/protocols/protocol_refineasy.py -> build/bdist.linux-armv7l/wheel/eman2/protocols
2020-04-16T11:49:45   copying build/lib/eman2/protocols/protocol_refine2d_bispec.py -> build/bdist.linux-armv7l/wheel/eman2/protocols
2020-04-16T11:49:45   copying build/lib/eman2/protocols/protocol_ctf.py -> build/bdist.linux-armv7l/wheel/eman2/protocols
2020-04-16T11:49:45   copying build/lib/eman2/protocols/protocol_reconstruct.py -> build/bdist.linux-armv7l/wheel/eman2/protocols
2020-04-16T11:49:45   copying build/lib/eman2/protocols/__init__.py -> build/bdist.linux-armv7l/wheel/eman2/protocols
2020-04-16T11:49:45   copying build/lib/eman2/protocols/protocol_initialmodel_sgd.py -> build/bdist.linux-armv7l/wheel/eman2/protocols
2020-04-16T11:49:45   copying build/lib/eman2/protocols/protocol_boxing.py -> build/bdist.linux-armv7l/wheel/eman2/protocols
2020-04-16T11:49:45   copying build/lib/eman2/protocols/protocol_tiltvalidate.py -> build/bdist.linux-armv7l/wheel/eman2/protocols
2020-04-16T11:49:45   copying build/lib/eman2/protocols/protocol_initialmodel.py -> build/bdist.linux-armv7l/wheel/eman2/protocols
2020-04-16T11:49:45   copying build/lib/eman2/protocols/protocol_refine2d.py -> build/bdist.linux-armv7l/wheel/eman2/protocols
2020-04-16T11:49:45   copying build/lib/eman2/e2converter.py -> build/bdist.linux-armv7l/wheel/eman2
2020-04-16T11:49:45   copying build/lib/eman2/wizards.py -> build/bdist.linux-armv7l/wheel/eman2
2020-04-16T11:49:45   running install_egg_info
2020-04-16T11:49:45   running egg_info
2020-04-16T11:49:45   writing top-level names to scipion_em_eman2.egg-info/top_level.txt
2020-04-16T11:49:45   writing requirements to scipion_em_eman2.egg-info/requires.txt
2020-04-16T11:49:45   writing entry points to scipion_em_eman2.egg-info/entry_points.txt
2020-04-16T11:49:45   writing dependency_links to scipion_em_eman2.egg-info/dependency_links.txt
2020-04-16T11:49:45   writing scipion_em_eman2.egg-info/PKG-INFO
2020-04-16T11:49:45   reading manifest file 'scipion_em_eman2.egg-info/SOURCES.txt'
2020-04-16T11:49:45   reading manifest template 'MANIFEST.in'
2020-04-16T11:49:45   writing manifest file 'scipion_em_eman2.egg-info/SOURCES.txt'
2020-04-16T11:49:45   Copying scipion_em_eman2.egg-info to build/bdist.linux-armv7l/wheel/scipion_em_eman2-1.0.7-py3.5.egg-info
2020-04-16T11:49:45   running install_scripts
2020-04-16T11:49:45   creating build/bdist.linux-armv7l/wheel/scipion_em_eman2-1.0.7.dist-info/WHEEL
2020-04-16T11:49:45   Building wheel for scipion-em-eman2 (setup.py): finished with status 'done'
2020-04-16T11:49:45   Stored in directory: /tmp/tmpqbnsr2va
2020-04-16T11:49:45 Successfully built scipion-em-eman2
2020-04-16T11:49:45 Cleaning up...
2020-04-16T11:49:45   Removing source in /tmp/pip-wheel-7evgc00i/scipion-em-eman2
2020-04-16T11:49:46 Removed build tracker '/tmp/pip-req-tracker-0hwmvthd'