2020-04-24T12:12:21,212 Created temporary directory: /tmp/pip-ephem-wheel-cache-wez1_gfx 2020-04-24T12:12:21,217 Created temporary directory: /tmp/pip-req-tracker-jp7mgro2 2020-04-24T12:12:21,217 Initialized build tracking at /tmp/pip-req-tracker-jp7mgro2 2020-04-24T12:12:21,218 Created build tracker: /tmp/pip-req-tracker-jp7mgro2 2020-04-24T12:12:21,218 Entered build tracker: /tmp/pip-req-tracker-jp7mgro2 2020-04-24T12:12:21,220 Created temporary directory: /tmp/pip-wheel-38c48k3y 2020-04-24T12:12:21,225 1 location(s) to search for versions of stk: 2020-04-24T12:12:21,225 * https://pypi.org/simple/stk/ 2020-04-24T12:12:21,225 Fetching project page and analyzing links: https://pypi.org/simple/stk/ 2020-04-24T12:12:21,226 Getting page https://pypi.org/simple/stk/ 2020-04-24T12:12:21,229 Found index url https://pypi.org/simple 2020-04-24T12:12:21,232 Getting credentials from keyring for https://pypi.org/simple 2020-04-24T12:12:21,232 Getting credentials from keyring for pypi.org 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https://files.pythonhosted.org/packages/b3/a2/9f10cc07228c87c0148808dd5a8aadeb699425498aff4577c26bc1742895/stk-2019.8.20.0.tar.gz#sha256=d230bce9df023ff1bf0dded51cf74ef8ae6cd869ae0f082b320f9e1c815dd16f (from https://pypi.org/simple/stk/), version: 2019.8.20.0 2020-04-24T12:12:21,550 Found link https://files.pythonhosted.org/packages/fb/1b/74ebbaa25c84d8a6a02347a1fc8701d42a6c5e8bca98ca26989ed205e4fb/stk-2019.8.20.1.tar.gz#sha256=ee27bc3f5a1438d84fd7640dd5c9ba9620fab90ad3f56700c2750cf97fccc389 (from https://pypi.org/simple/stk/), version: 2019.8.20.1 2020-04-24T12:12:21,551 Found link https://files.pythonhosted.org/packages/0e/87/93ca51353f7af141163aac17c95445ec5eb7211c6db08b68f3c4299f27a6/stk-2019.8.20.2.tar.gz#sha256=06f7ff60e444d7bd309df46c1fd6106f83906cba20988d4afb1855830bf00b3d (from https://pypi.org/simple/stk/), version: 2019.8.20.2 2020-04-24T12:12:21,551 Found link https://files.pythonhosted.org/packages/f8/0d/080879e2c52fc3430cf0ffeba13bd9d6be630846725d79dfdd956681101f/stk-2019.9.1.0.tar.gz#sha256=23d2ab919be13fd260e49b16a31759291f5ef087b0acebcb7cd25b328e142412 (from https://pypi.org/simple/stk/), version: 2019.9.1.0 2020-04-24T12:12:21,552 Found link https://files.pythonhosted.org/packages/fb/8e/7ad0e898c7ea17f919cd53d1488ca067f9791750837585203963cb746a0c/stk-2019.9.14.0.tar.gz#sha256=9068129d2eb474313db51b4422549dff3f4939c807c2efaee9a380bd9f410f65 (from https://pypi.org/simple/stk/), version: 2019.9.14.0 2020-04-24T12:12:21,552 Found link https://files.pythonhosted.org/packages/3e/86/f86db5a91889b10d06bdce7b5f3a8fe250a35f445ac7a00cd78097ffd85d/stk-2019.9.20.0.tar.gz#sha256=b0eff34b67f4383685df3474b8e7ba811f573658c7ace93c21eb48af4557177f (from https://pypi.org/simple/stk/), version: 2019.9.20.0 2020-04-24T12:12:21,553 Found link https://files.pythonhosted.org/packages/39/2b/abbb95a3e4472479de395592e8398b8625f1f23d04abb00a026f29bc0722/stk-2019.9.20.1.tar.gz#sha256=151836aab84c50eb2d6009888cd2400ce0bb89d252c985614cab6bffc8e8aa8d (from https://pypi.org/simple/stk/), version: 2019.9.20.1 2020-04-24T12:12:21,554 Found link https://files.pythonhosted.org/packages/d7/c3/5e29d55631a5d32dc4af6a8757721da3cc709b8d5d6c958bb28e76ed98b7/stk-2019.9.21.0.tar.gz#sha256=3cbe581b592139c6bcd420f10392ed4f9ec70d0e3fe619cff0447bec8d087b05 (from https://pypi.org/simple/stk/), version: 2019.9.21.0 2020-04-24T12:12:21,554 Found link https://files.pythonhosted.org/packages/e7/92/b2e09426bfde0c1ab74957a08bf2bf8cddb5d55fd1c4be0af9fe655e2a31/stk-2019.9.24.0.tar.gz#sha256=08ac527c9e21d9e87b4a91c20f18bb0b577fbca78b13fbc29ddd0ebb040235ef (from https://pypi.org/simple/stk/), version: 2019.9.24.0 2020-04-24T12:12:21,555 Found link https://files.pythonhosted.org/packages/04/48/960433eceb5dd1b5dfb0d375c9cdf11cb4bcbbad42104919cf141e6cf5c0/stk-2019.10.21.0.tar.gz#sha256=da818eb300085a8b1a8d95f851fb60379a66a939b2163db355a0d7632bfbc27e (from https://pypi.org/simple/stk/), version: 2019.10.21.0 2020-04-24T12:12:21,555 Found link https://files.pythonhosted.org/packages/5b/39/17dfd3ab64225794d411c17941910df23b6b6df15dd9adb0d9004a24daf9/stk-2020.4.23.0.tar.gz#sha256=9600cb4b88f40e94e28e945d1878cc9791114ce04ac5d7068f6e4434455258ff (from https://pypi.org/simple/stk/), version: 2020.4.23.0 2020-04-24T12:12:21,556 Found link https://files.pythonhosted.org/packages/4d/2b/a8822df96e6d9aaa4fd6c7e077aa0ceea5652f56b579622420ffec2621b2/stk-2020.4.23.1.tar.gz#sha256=156697e9c1d8d0237a7728fa0dda5eb639a226118bc74421fa5da043ce83b593 (from https://pypi.org/simple/stk/), version: 2020.4.23.1 2020-04-24T12:12:21,557 Found link https://files.pythonhosted.org/packages/b3/86/82361354f2bb82f1813d9f0efc7cdc5d8938f5199836f8c0946695a6a24d/stk-2020.4.24.0.tar.gz#sha256=705e933446c37b088eae136b37a8c83d8fcf2c00ad531df1beef82524960b9de (from https://pypi.org/simple/stk/), version: 2020.4.24.0 2020-04-24T12:12:21,590 Given no hashes to check 1 links for project 'stk': discarding no candidates 2020-04-24T12:12:21,592 Using version 2020.4.24.0 (newest of versions: 2020.4.24.0) 2020-04-24T12:12:21,598 Collecting stk==2020.4.24.0 2020-04-24T12:12:21,602 Created temporary directory: /tmp/pip-unpack-5tyxcosh 2020-04-24T12:12:21,604 Getting credentials from keyring for files.pythonhosted.org 2020-04-24T12:12:21,705 Downloading stk-2020.4.24.0.tar.gz (123 kB) 2020-04-24T12:12:23,202 Added stk==2020.4.24.0 from https://files.pythonhosted.org/packages/b3/86/82361354f2bb82f1813d9f0efc7cdc5d8938f5199836f8c0946695a6a24d/stk-2020.4.24.0.tar.gz#sha256=705e933446c37b088eae136b37a8c83d8fcf2c00ad531df1beef82524960b9de to build tracker '/tmp/pip-req-tracker-jp7mgro2' 2020-04-24T12:12:23,204 Running setup.py (path:/tmp/pip-wheel-38c48k3y/stk/setup.py) egg_info for package stk 2020-04-24T12:12:23,205 Running command python setup.py egg_info 2020-04-24T12:12:25,262 running egg_info 2020-04-24T12:12:25,268 creating /tmp/pip-wheel-38c48k3y/stk/pip-egg-info/stk.egg-info 2020-04-24T12:12:25,271 writing /tmp/pip-wheel-38c48k3y/stk/pip-egg-info/stk.egg-info/PKG-INFO 2020-04-24T12:12:25,277 writing dependency_links to /tmp/pip-wheel-38c48k3y/stk/pip-egg-info/stk.egg-info/dependency_links.txt 2020-04-24T12:12:25,282 writing requirements to /tmp/pip-wheel-38c48k3y/stk/pip-egg-info/stk.egg-info/requires.txt 2020-04-24T12:12:25,285 writing top-level names to /tmp/pip-wheel-38c48k3y/stk/pip-egg-info/stk.egg-info/top_level.txt 2020-04-24T12:12:25,290 writing manifest file '/tmp/pip-wheel-38c48k3y/stk/pip-egg-info/stk.egg-info/SOURCES.txt' 2020-04-24T12:12:25,672 reading manifest file '/tmp/pip-wheel-38c48k3y/stk/pip-egg-info/stk.egg-info/SOURCES.txt' 2020-04-24T12:12:25,698 writing manifest file '/tmp/pip-wheel-38c48k3y/stk/pip-egg-info/stk.egg-info/SOURCES.txt' 2020-04-24T12:12:25,703 /usr/local/lib/python3.7/dist-packages/setuptools/dist.py:476: UserWarning: Normalizing '2020.04.24.0' to '2020.4.24.0' 2020-04-24T12:12:25,703 normalized_version, 2020-04-24T12:12:25,823 Source in /tmp/pip-wheel-38c48k3y/stk has version 2020.4.24.0, which satisfies requirement stk==2020.4.24.0 from https://files.pythonhosted.org/packages/b3/86/82361354f2bb82f1813d9f0efc7cdc5d8938f5199836f8c0946695a6a24d/stk-2020.4.24.0.tar.gz#sha256=705e933446c37b088eae136b37a8c83d8fcf2c00ad531df1beef82524960b9de 2020-04-24T12:12:25,825 Removed stk==2020.4.24.0 from https://files.pythonhosted.org/packages/b3/86/82361354f2bb82f1813d9f0efc7cdc5d8938f5199836f8c0946695a6a24d/stk-2020.4.24.0.tar.gz#sha256=705e933446c37b088eae136b37a8c83d8fcf2c00ad531df1beef82524960b9de from build tracker '/tmp/pip-req-tracker-jp7mgro2' 2020-04-24T12:12:25,828 Building wheels for collected packages: stk 2020-04-24T12:12:25,838 Created temporary directory: /tmp/pip-wheel-5zy1mygs 2020-04-24T12:12:25,839 Building wheel for stk (setup.py): started 2020-04-24T12:12:25,839 Destination directory: /tmp/pip-wheel-5zy1mygs 2020-04-24T12:12:25,840 Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-38c48k3y/stk/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-38c48k3y/stk/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-5zy1mygs 2020-04-24T12:12:27,713 /usr/local/lib/python3.7/dist-packages/setuptools/dist.py:476: UserWarning: Normalizing '2020.04.24.0' to '2020.4.24.0' 2020-04-24T12:12:27,714 normalized_version, 2020-04-24T12:12:27,788 running bdist_wheel 2020-04-24T12:12:27,801 running build 2020-04-24T12:12:27,802 running build_py 2020-04-24T12:12:28,073 creating build 2020-04-24T12:12:28,074 creating build/lib 2020-04-24T12:12:28,076 creating build/lib/stk 2020-04-24T12:12:28,078 copying src/stk/__init__.py -> build/lib/stk 2020-04-24T12:12:28,084 creating build/lib/stk/databases 2020-04-24T12:12:28,087 copying src/stk/databases/constructed_molecule.py -> build/lib/stk/databases 2020-04-24T12:12:28,091 copying src/stk/databases/value.py -> build/lib/stk/databases 2020-04-24T12:12:28,095 copying src/stk/databases/__init__.py -> build/lib/stk/databases 2020-04-24T12:12:28,100 copying src/stk/databases/molecule.py -> build/lib/stk/databases 2020-04-24T12:12:28,105 creating build/lib/stk/utilities 2020-04-24T12:12:28,108 copying src/stk/utilities/utilities.py -> build/lib/stk/utilities 2020-04-24T12:12:28,118 copying src/stk/utilities/__init__.py -> build/lib/stk/utilities 2020-04-24T12:12:28,125 creating build/lib/stk/molecular 2020-04-24T12:12:28,128 copying src/stk/molecular/__init__.py -> build/lib/stk/molecular 2020-04-24T12:12:28,136 creating build/lib/stk/serialization 2020-04-24T12:12:28,138 copying src/stk/serialization/__init__.py -> build/lib/stk/serialization 2020-04-24T12:12:28,146 creating build/lib/stk/ea 2020-04-24T12:12:28,149 copying src/stk/ea/generation.py -> build/lib/stk/ea 2020-04-24T12:12:28,154 copying src/stk/ea/__init__.py -> build/lib/stk/ea 2020-04-24T12:12:28,160 creating build/lib/stk/databases/mongo_db 2020-04-24T12:12:28,162 copying src/stk/databases/mongo_db/constructed_molecule.py -> build/lib/stk/databases/mongo_db 2020-04-24T12:12:28,168 copying src/stk/databases/mongo_db/value.py -> build/lib/stk/databases/mongo_db 2020-04-24T12:12:28,175 copying src/stk/databases/mongo_db/utilities.py -> build/lib/stk/databases/mongo_db 2020-04-24T12:12:28,180 copying src/stk/databases/mongo_db/__init__.py -> build/lib/stk/databases/mongo_db 2020-04-24T12:12:28,186 copying src/stk/databases/mongo_db/molecule.py -> build/lib/stk/databases/mongo_db 2020-04-24T12:12:28,195 creating build/lib/stk/molecular/topology_graphs 2020-04-24T12:12:28,197 copying src/stk/molecular/topology_graphs/__init__.py -> build/lib/stk/molecular/topology_graphs 2020-04-24T12:12:28,205 creating build/lib/stk/molecular/molecules 2020-04-24T12:12:28,208 copying src/stk/molecular/molecules/constructed_molecule.py -> build/lib/stk/molecular/molecules 2020-04-24T12:12:28,214 copying src/stk/molecular/molecules/__init__.py -> build/lib/stk/molecular/molecules 2020-04-24T12:12:28,218 copying src/stk/molecular/molecules/building_block.py -> build/lib/stk/molecular/molecules 2020-04-24T12:12:28,226 creating build/lib/stk/molecular/functional_groups 2020-04-24T12:12:28,228 copying src/stk/molecular/functional_groups/__init__.py -> build/lib/stk/molecular/functional_groups 2020-04-24T12:12:28,235 creating build/lib/stk/molecular/reactions 2020-04-24T12:12:28,238 copying src/stk/molecular/reactions/__init__.py -> build/lib/stk/molecular/reactions 2020-04-24T12:12:28,247 creating build/lib/stk/molecular/atoms 2020-04-24T12:12:28,250 copying src/stk/molecular/atoms/elements.py -> build/lib/stk/molecular/atoms 2020-04-24T12:12:28,256 copying src/stk/molecular/atoms/atom_info.py -> build/lib/stk/molecular/atoms 2020-04-24T12:12:28,260 copying src/stk/molecular/atoms/__init__.py -> build/lib/stk/molecular/atoms 2020-04-24T12:12:28,264 copying src/stk/molecular/atoms/atom.py -> build/lib/stk/molecular/atoms 2020-04-24T12:12:28,271 creating build/lib/stk/molecular/key_makers 2020-04-24T12:12:28,274 copying src/stk/molecular/key_makers/inchi_key.py -> build/lib/stk/molecular/key_makers 2020-04-24T12:12:28,280 copying src/stk/molecular/key_makers/inchi.py -> build/lib/stk/molecular/key_makers 2020-04-24T12:12:28,286 copying src/stk/molecular/key_makers/utilities.py -> build/lib/stk/molecular/key_makers 2020-04-24T12:12:28,291 copying src/stk/molecular/key_makers/__init__.py -> build/lib/stk/molecular/key_makers 2020-04-24T12:12:28,297 copying src/stk/molecular/key_makers/molecule.py -> build/lib/stk/molecular/key_makers 2020-04-24T12:12:28,305 creating build/lib/stk/molecular/bonds 2020-04-24T12:12:28,308 copying src/stk/molecular/bonds/bond_info.py -> build/lib/stk/molecular/bonds 2020-04-24T12:12:28,314 copying src/stk/molecular/bonds/bond.py -> build/lib/stk/molecular/bonds 2020-04-24T12:12:28,321 copying src/stk/molecular/bonds/__init__.py -> build/lib/stk/molecular/bonds 2020-04-24T12:12:28,329 creating build/lib/stk/molecular/topology_graphs/cof 2020-04-24T12:12:28,332 copying src/stk/molecular/topology_graphs/cof/hexagonal.py -> build/lib/stk/molecular/topology_graphs/cof 2020-04-24T12:12:28,340 copying src/stk/molecular/topology_graphs/cof/square.py -> build/lib/stk/molecular/topology_graphs/cof 2020-04-24T12:12:28,345 copying src/stk/molecular/topology_graphs/cof/edge.py -> build/lib/stk/molecular/topology_graphs/cof 2020-04-24T12:12:28,351 copying src/stk/molecular/topology_graphs/cof/linkerless_honeycomb.py -> build/lib/stk/molecular/topology_graphs/cof 2020-04-24T12:12:28,357 copying src/stk/molecular/topology_graphs/cof/cof.py -> build/lib/stk/molecular/topology_graphs/cof 2020-04-24T12:12:28,365 copying src/stk/molecular/topology_graphs/cof/__init__.py -> build/lib/stk/molecular/topology_graphs/cof 2020-04-24T12:12:28,371 copying src/stk/molecular/topology_graphs/cof/vertices.py -> build/lib/stk/molecular/topology_graphs/cof 2020-04-24T12:12:28,378 copying src/stk/molecular/topology_graphs/cof/kagome.py -> build/lib/stk/molecular/topology_graphs/cof 2020-04-24T12:12:28,384 copying src/stk/molecular/topology_graphs/cof/honeycomb.py -> build/lib/stk/molecular/topology_graphs/cof 2020-04-24T12:12:28,392 creating build/lib/stk/molecular/topology_graphs/polymer 2020-04-24T12:12:28,395 copying src/stk/molecular/topology_graphs/polymer/__init__.py -> build/lib/stk/molecular/topology_graphs/polymer 2020-04-24T12:12:28,400 creating build/lib/stk/molecular/topology_graphs/host_guest 2020-04-24T12:12:28,403 copying src/stk/molecular/topology_graphs/host_guest/complex.py -> build/lib/stk/molecular/topology_graphs/host_guest 2020-04-24T12:12:28,408 copying src/stk/molecular/topology_graphs/host_guest/__init__.py -> build/lib/stk/molecular/topology_graphs/host_guest 2020-04-24T12:12:28,412 copying src/stk/molecular/topology_graphs/host_guest/vertices.py -> build/lib/stk/molecular/topology_graphs/host_guest 2020-04-24T12:12:28,420 creating build/lib/stk/molecular/topology_graphs/macrocycle 2020-04-24T12:12:28,423 copying src/stk/molecular/topology_graphs/macrocycle/macrocycle.py -> build/lib/stk/molecular/topology_graphs/macrocycle 2020-04-24T12:12:28,430 copying src/stk/molecular/topology_graphs/macrocycle/__init__.py -> build/lib/stk/molecular/topology_graphs/macrocycle 2020-04-24T12:12:28,436 copying src/stk/molecular/topology_graphs/macrocycle/vertices.py -> build/lib/stk/molecular/topology_graphs/macrocycle 2020-04-24T12:12:28,444 creating build/lib/stk/molecular/topology_graphs/utilities 2020-04-24T12:12:28,447 copying src/stk/molecular/topology_graphs/utilities/edge_sorter.py -> build/lib/stk/molecular/topology_graphs/utilities 2020-04-24T12:12:28,454 copying src/stk/molecular/topology_graphs/utilities/functional_group_sorter.py -> build/lib/stk/molecular/topology_graphs/utilities 2020-04-24T12:12:28,459 copying src/stk/molecular/topology_graphs/utilities/sorter.py -> build/lib/stk/molecular/topology_graphs/utilities 2020-04-24T12:12:28,463 copying src/stk/molecular/topology_graphs/utilities/__init__.py -> build/lib/stk/molecular/topology_graphs/utilities 2020-04-24T12:12:28,468 creating build/lib/stk/molecular/topology_graphs/topology_graph 2020-04-24T12:12:28,470 copying src/stk/molecular/topology_graphs/topology_graph/construction_result.py -> build/lib/stk/molecular/topology_graphs/topology_graph 2020-04-24T12:12:28,476 copying src/stk/molecular/topology_graphs/topology_graph/edge_group.py -> build/lib/stk/molecular/topology_graphs/topology_graph 2020-04-24T12:12:28,482 copying src/stk/molecular/topology_graphs/topology_graph/edge.py -> build/lib/stk/molecular/topology_graphs/topology_graph 2020-04-24T12:12:28,489 copying src/stk/molecular/topology_graphs/topology_graph/vertex.py -> build/lib/stk/molecular/topology_graphs/topology_graph 2020-04-24T12:12:28,495 copying src/stk/molecular/topology_graphs/topology_graph/__init__.py -> build/lib/stk/molecular/topology_graphs/topology_graph 2020-04-24T12:12:28,503 creating build/lib/stk/molecular/topology_graphs/cage 2020-04-24T12:12:28,507 copying src/stk/molecular/topology_graphs/cage/cage_construction_state.py -> build/lib/stk/molecular/topology_graphs/cage 2020-04-24T12:12:28,514 copying src/stk/molecular/topology_graphs/cage/__init__.py -> build/lib/stk/molecular/topology_graphs/cage 2020-04-24T12:12:28,520 copying src/stk/molecular/topology_graphs/cage/vertices.py -> build/lib/stk/molecular/topology_graphs/cage 2020-04-24T12:12:28,527 copying src/stk/molecular/topology_graphs/cage/cage.py -> build/lib/stk/molecular/topology_graphs/cage 2020-04-24T12:12:28,537 creating build/lib/stk/molecular/topology_graphs/rotaxane 2020-04-24T12:12:28,539 copying src/stk/molecular/topology_graphs/rotaxane/nrotaxane.py -> build/lib/stk/molecular/topology_graphs/rotaxane 2020-04-24T12:12:28,545 copying src/stk/molecular/topology_graphs/rotaxane/__init__.py -> build/lib/stk/molecular/topology_graphs/rotaxane 2020-04-24T12:12:28,549 copying src/stk/molecular/topology_graphs/rotaxane/vertices.py -> build/lib/stk/molecular/topology_graphs/rotaxane 2020-04-24T12:12:28,555 creating build/lib/stk/molecular/topology_graphs/polymer/linear 2020-04-24T12:12:28,558 copying src/stk/molecular/topology_graphs/polymer/linear/linear.py -> build/lib/stk/molecular/topology_graphs/polymer/linear 2020-04-24T12:12:28,565 copying src/stk/molecular/topology_graphs/polymer/linear/__init__.py -> build/lib/stk/molecular/topology_graphs/polymer/linear 2020-04-24T12:12:28,571 copying src/stk/molecular/topology_graphs/polymer/linear/vertices.py -> build/lib/stk/molecular/topology_graphs/polymer/linear 2020-04-24T12:12:28,580 creating build/lib/stk/molecular/topology_graphs/topology_graph/construction_state 2020-04-24T12:12:28,583 copying src/stk/molecular/topology_graphs/topology_graph/construction_state/construction_state.py -> build/lib/stk/molecular/topology_graphs/topology_graph/construction_state 2020-04-24T12:12:28,591 copying src/stk/molecular/topology_graphs/topology_graph/construction_state/graph_state.py -> build/lib/stk/molecular/topology_graphs/topology_graph/construction_state 2020-04-24T12:12:28,597 copying src/stk/molecular/topology_graphs/topology_graph/construction_state/__init__.py -> build/lib/stk/molecular/topology_graphs/topology_graph/construction_state 2020-04-24T12:12:28,603 creating build/lib/stk/molecular/topology_graphs/topology_graph/topology_graph 2020-04-24T12:12:28,605 copying src/stk/molecular/topology_graphs/topology_graph/topology_graph/topology_graph.py -> build/lib/stk/molecular/topology_graphs/topology_graph/topology_graph 2020-04-24T12:12:28,611 copying src/stk/molecular/topology_graphs/topology_graph/topology_graph/__init__.py -> build/lib/stk/molecular/topology_graphs/topology_graph/topology_graph 2020-04-24T12:12:28,617 creating build/lib/stk/molecular/topology_graphs/topology_graph/construction_state/molecule_state 2020-04-24T12:12:28,620 copying src/stk/molecular/topology_graphs/topology_graph/construction_state/molecule_state/deletions_summary.py -> build/lib/stk/molecular/topology_graphs/topology_graph/construction_state/molecule_state 2020-04-24T12:12:28,627 copying src/stk/molecular/topology_graphs/topology_graph/construction_state/molecule_state/molecule_state.py -> build/lib/stk/molecular/topology_graphs/topology_graph/construction_state/molecule_state 2020-04-24T12:12:28,634 copying src/stk/molecular/topology_graphs/topology_graph/construction_state/molecule_state/__init__.py -> build/lib/stk/molecular/topology_graphs/topology_graph/construction_state/molecule_state 2020-04-24T12:12:28,642 creating build/lib/stk/molecular/topology_graphs/topology_graph/construction_state/molecule_state/reactions_summary 2020-04-24T12:12:28,645 copying src/stk/molecular/topology_graphs/topology_graph/construction_state/molecule_state/reactions_summary/reactions_summary.py -> build/lib/stk/molecular/topology_graphs/topology_graph/construction_state/molecule_state/reactions_summary 2020-04-24T12:12:28,652 copying src/stk/molecular/topology_graphs/topology_graph/construction_state/molecule_state/reactions_summary/atom_batch.py -> build/lib/stk/molecular/topology_graphs/topology_graph/construction_state/molecule_state/reactions_summary 2020-04-24T12:12:28,658 copying src/stk/molecular/topology_graphs/topology_graph/construction_state/molecule_state/reactions_summary/bond_batch.py -> build/lib/stk/molecular/topology_graphs/topology_graph/construction_state/molecule_state/reactions_summary 2020-04-24T12:12:28,662 copying src/stk/molecular/topology_graphs/topology_graph/construction_state/molecule_state/reactions_summary/__init__.py -> build/lib/stk/molecular/topology_graphs/topology_graph/construction_state/molecule_state/reactions_summary 2020-04-24T12:12:28,668 creating build/lib/stk/molecular/topology_graphs/topology_graph/construction_state/molecule_state/placements_summary 2020-04-24T12:12:28,670 copying src/stk/molecular/topology_graphs/topology_graph/construction_state/molecule_state/placements_summary/atom_batch.py -> build/lib/stk/molecular/topology_graphs/topology_graph/construction_state/molecule_state/placements_summary 2020-04-24T12:12:28,675 copying src/stk/molecular/topology_graphs/topology_graph/construction_state/molecule_state/placements_summary/placements_summary.py -> build/lib/stk/molecular/topology_graphs/topology_graph/construction_state/molecule_state/placements_summary 2020-04-24T12:12:28,682 copying src/stk/molecular/topology_graphs/topology_graph/construction_state/molecule_state/placements_summary/bond_batch.py -> build/lib/stk/molecular/topology_graphs/topology_graph/construction_state/molecule_state/placements_summary 2020-04-24T12:12:28,688 copying src/stk/molecular/topology_graphs/topology_graph/construction_state/molecule_state/placements_summary/__init__.py -> build/lib/stk/molecular/topology_graphs/topology_graph/construction_state/molecule_state/placements_summary 2020-04-24T12:12:28,696 creating build/lib/stk/molecular/topology_graphs/topology_graph/topology_graph/implementations 2020-04-24T12:12:28,699 copying src/stk/molecular/topology_graphs/topology_graph/topology_graph/implementations/parallel.py -> build/lib/stk/molecular/topology_graphs/topology_graph/topology_graph/implementations 2020-04-24T12:12:28,706 copying src/stk/molecular/topology_graphs/topology_graph/topology_graph/implementations/serial.py -> build/lib/stk/molecular/topology_graphs/topology_graph/topology_graph/implementations 2020-04-24T12:12:28,712 copying src/stk/molecular/topology_graphs/topology_graph/topology_graph/implementations/utilities.py -> build/lib/stk/molecular/topology_graphs/topology_graph/topology_graph/implementations 2020-04-24T12:12:28,717 copying src/stk/molecular/topology_graphs/topology_graph/topology_graph/implementations/__init__.py -> build/lib/stk/molecular/topology_graphs/topology_graph/topology_graph/implementations 2020-04-24T12:12:28,725 creating build/lib/stk/molecular/topology_graphs/cage/three_plus_three 2020-04-24T12:12:28,729 copying src/stk/molecular/topology_graphs/cage/three_plus_three/four_plus_four.py -> build/lib/stk/molecular/topology_graphs/cage/three_plus_three 2020-04-24T12:12:28,735 copying src/stk/molecular/topology_graphs/cage/three_plus_three/one_plus_one.py -> build/lib/stk/molecular/topology_graphs/cage/three_plus_three 2020-04-24T12:12:28,741 copying src/stk/molecular/topology_graphs/cage/three_plus_three/two_plus_two.py -> build/lib/stk/molecular/topology_graphs/cage/three_plus_three 2020-04-24T12:12:28,747 copying src/stk/molecular/topology_graphs/cage/three_plus_three/__init__.py -> build/lib/stk/molecular/topology_graphs/cage/three_plus_three 2020-04-24T12:12:28,754 creating build/lib/stk/molecular/topology_graphs/cage/three_plus_four 2020-04-24T12:12:28,757 copying src/stk/molecular/topology_graphs/cage/three_plus_four/six_plus_eight.py -> build/lib/stk/molecular/topology_graphs/cage/three_plus_four 2020-04-24T12:12:28,763 copying src/stk/molecular/topology_graphs/cage/three_plus_four/__init__.py -> build/lib/stk/molecular/topology_graphs/cage/three_plus_four 2020-04-24T12:12:28,768 creating build/lib/stk/molecular/topology_graphs/cage/two_plus_five 2020-04-24T12:12:28,770 copying src/stk/molecular/topology_graphs/cage/two_plus_five/twelve_plus_thirty.py -> build/lib/stk/molecular/topology_graphs/cage/two_plus_five 2020-04-24T12:12:28,776 copying src/stk/molecular/topology_graphs/cage/two_plus_five/__init__.py -> build/lib/stk/molecular/topology_graphs/cage/two_plus_five 2020-04-24T12:12:28,784 creating build/lib/stk/molecular/topology_graphs/cage/two_plus_four 2020-04-24T12:12:28,787 copying src/stk/molecular/topology_graphs/cage/two_plus_four/four_plus_eight.py -> build/lib/stk/molecular/topology_graphs/cage/two_plus_four 2020-04-24T12:12:28,793 copying src/stk/molecular/topology_graphs/cage/two_plus_four/eight_plus_sixteen.py -> build/lib/stk/molecular/topology_graphs/cage/two_plus_four 2020-04-24T12:12:28,800 copying src/stk/molecular/topology_graphs/cage/two_plus_four/five_plus_ten.py -> build/lib/stk/molecular/topology_graphs/cage/two_plus_four 2020-04-24T12:12:28,805 copying src/stk/molecular/topology_graphs/cage/two_plus_four/two_plus_four.py -> build/lib/stk/molecular/topology_graphs/cage/two_plus_four 2020-04-24T12:12:28,810 copying src/stk/molecular/topology_graphs/cage/two_plus_four/six_plus_twelve.py -> build/lib/stk/molecular/topology_graphs/cage/two_plus_four 2020-04-24T12:12:28,814 copying src/stk/molecular/topology_graphs/cage/two_plus_four/__init__.py -> build/lib/stk/molecular/topology_graphs/cage/two_plus_four 2020-04-24T12:12:28,819 copying src/stk/molecular/topology_graphs/cage/two_plus_four/ten_plus_twenty.py -> build/lib/stk/molecular/topology_graphs/cage/two_plus_four 2020-04-24T12:12:28,826 copying src/stk/molecular/topology_graphs/cage/two_plus_four/three_plus_six.py -> build/lib/stk/molecular/topology_graphs/cage/two_plus_four 2020-04-24T12:12:28,835 creating build/lib/stk/molecular/topology_graphs/cage/two_plus_three 2020-04-24T12:12:28,838 copying src/stk/molecular/topology_graphs/cage/two_plus_three/eight_plus_twelve.py -> build/lib/stk/molecular/topology_graphs/cage/two_plus_three 2020-04-24T12:12:28,844 copying src/stk/molecular/topology_graphs/cage/two_plus_three/two_plus_three.py -> build/lib/stk/molecular/topology_graphs/cage/two_plus_three 2020-04-24T12:12:28,848 copying src/stk/molecular/topology_graphs/cage/two_plus_three/four_plus_six_2.py -> build/lib/stk/molecular/topology_graphs/cage/two_plus_three 2020-04-24T12:12:28,853 copying src/stk/molecular/topology_graphs/cage/two_plus_three/four_plus_six.py -> build/lib/stk/molecular/topology_graphs/cage/two_plus_three 2020-04-24T12:12:28,858 copying src/stk/molecular/topology_graphs/cage/two_plus_three/twenty_plus_thirty.py -> build/lib/stk/molecular/topology_graphs/cage/two_plus_three 2020-04-24T12:12:28,864 copying src/stk/molecular/topology_graphs/cage/two_plus_three/__init__.py -> build/lib/stk/molecular/topology_graphs/cage/two_plus_three 2020-04-24T12:12:28,870 copying src/stk/molecular/topology_graphs/cage/two_plus_three/six_plus_nine.py -> build/lib/stk/molecular/topology_graphs/cage/two_plus_three 2020-04-24T12:12:28,878 creating build/lib/stk/molecular/molecules/molecule 2020-04-24T12:12:28,880 copying src/stk/molecular/molecules/molecule/__init__.py -> build/lib/stk/molecular/molecules/molecule 2020-04-24T12:12:28,887 copying src/stk/molecular/molecules/molecule/molecule.py -> build/lib/stk/molecular/molecules/molecule 2020-04-24T12:12:28,897 creating build/lib/stk/molecular/molecules/molecule/utilities 2020-04-24T12:12:28,900 copying src/stk/molecular/molecules/molecule/utilities/__init__.py -> build/lib/stk/molecular/molecules/molecule/utilities 2020-04-24T12:12:28,908 creating build/lib/stk/molecular/molecules/molecule/utilities/writers 2020-04-24T12:12:28,911 copying src/stk/molecular/molecules/molecule/utilities/writers/pdb.py -> build/lib/stk/molecular/molecules/molecule/utilities/writers 2020-04-24T12:12:28,917 copying src/stk/molecular/molecules/molecule/utilities/writers/xyz.py -> build/lib/stk/molecular/molecules/molecule/utilities/writers 2020-04-24T12:12:28,923 copying src/stk/molecular/molecules/molecule/utilities/writers/__init__.py -> build/lib/stk/molecular/molecules/molecule/utilities/writers 2020-04-24T12:12:28,929 copying src/stk/molecular/molecules/molecule/utilities/writers/mdl_mol.py -> build/lib/stk/molecular/molecules/molecule/utilities/writers 2020-04-24T12:12:28,937 creating build/lib/stk/molecular/molecules/molecule/utilities/updaters 2020-04-24T12:12:28,940 copying src/stk/molecular/molecules/molecule/utilities/updaters/turbomole.py -> build/lib/stk/molecular/molecules/molecule/utilities/updaters 2020-04-24T12:12:28,946 copying src/stk/molecular/molecules/molecule/utilities/updaters/mae.py -> build/lib/stk/molecular/molecules/molecule/utilities/updaters 2020-04-24T12:12:28,950 copying src/stk/molecular/molecules/molecule/utilities/updaters/xyz.py -> build/lib/stk/molecular/molecules/molecule/utilities/updaters 2020-04-24T12:12:28,954 copying src/stk/molecular/molecules/molecule/utilities/updaters/__init__.py -> build/lib/stk/molecular/molecules/molecule/utilities/updaters 2020-04-24T12:12:28,958 copying src/stk/molecular/molecules/molecule/utilities/updaters/mdl_mol.py -> build/lib/stk/molecular/molecules/molecule/utilities/updaters 2020-04-24T12:12:28,968 creating build/lib/stk/molecular/functional_groups/functional_groups 2020-04-24T12:12:28,971 copying src/stk/molecular/functional_groups/functional_groups/primary_amino.py -> build/lib/stk/molecular/functional_groups/functional_groups 2020-04-24T12:12:28,978 copying src/stk/molecular/functional_groups/functional_groups/boronic_acid.py -> build/lib/stk/molecular/functional_groups/functional_groups 2020-04-24T12:12:28,984 copying src/stk/molecular/functional_groups/functional_groups/diol.py -> build/lib/stk/molecular/functional_groups/functional_groups 2020-04-24T12:12:28,989 copying src/stk/molecular/functional_groups/functional_groups/thioacid.py -> build/lib/stk/molecular/functional_groups/functional_groups 2020-04-24T12:12:28,994 copying src/stk/molecular/functional_groups/functional_groups/fluoro.py -> build/lib/stk/molecular/functional_groups/functional_groups 2020-04-24T12:12:29,000 copying src/stk/molecular/functional_groups/functional_groups/alkyne.py -> build/lib/stk/molecular/functional_groups/functional_groups 2020-04-24T12:12:29,006 copying src/stk/molecular/functional_groups/functional_groups/functional_group.py -> build/lib/stk/molecular/functional_groups/functional_groups 2020-04-24T12:12:29,013 copying src/stk/molecular/functional_groups/functional_groups/ring_amine.py -> build/lib/stk/molecular/functional_groups/functional_groups 2020-04-24T12:12:29,019 copying src/stk/molecular/functional_groups/functional_groups/difluoro.py -> build/lib/stk/molecular/functional_groups/functional_groups 2020-04-24T12:12:29,025 copying src/stk/molecular/functional_groups/functional_groups/thiol.py -> build/lib/stk/molecular/functional_groups/functional_groups 2020-04-24T12:12:29,031 copying src/stk/molecular/functional_groups/functional_groups/iodo.py -> build/lib/stk/molecular/functional_groups/functional_groups 2020-04-24T12:12:29,037 copying src/stk/molecular/functional_groups/functional_groups/carboxylic_acid.py -> build/lib/stk/molecular/functional_groups/functional_groups 2020-04-24T12:12:29,044 copying src/stk/molecular/functional_groups/functional_groups/dibromo.py -> build/lib/stk/molecular/functional_groups/functional_groups 2020-04-24T12:12:29,050 copying src/stk/molecular/functional_groups/functional_groups/secondary_amino.py -> build/lib/stk/molecular/functional_groups/functional_groups 2020-04-24T12:12:29,056 copying src/stk/molecular/functional_groups/functional_groups/generic_functional_group.py -> build/lib/stk/molecular/functional_groups/functional_groups 2020-04-24T12:12:29,062 copying src/stk/molecular/functional_groups/functional_groups/aldehyde.py -> build/lib/stk/molecular/functional_groups/functional_groups 2020-04-24T12:12:29,070 copying src/stk/molecular/functional_groups/functional_groups/alkene.py -> build/lib/stk/molecular/functional_groups/functional_groups 2020-04-24T12:12:29,076 copying src/stk/molecular/functional_groups/functional_groups/amide.py -> build/lib/stk/molecular/functional_groups/functional_groups 2020-04-24T12:12:29,083 copying src/stk/molecular/functional_groups/functional_groups/alcohol.py -> build/lib/stk/molecular/functional_groups/functional_groups 2020-04-24T12:12:29,088 copying src/stk/molecular/functional_groups/functional_groups/__init__.py -> build/lib/stk/molecular/functional_groups/functional_groups 2020-04-24T12:12:29,094 copying src/stk/molecular/functional_groups/functional_groups/bromo.py -> build/lib/stk/molecular/functional_groups/functional_groups 2020-04-24T12:12:29,106 creating build/lib/stk/molecular/functional_groups/factories 2020-04-24T12:12:29,108 copying src/stk/molecular/functional_groups/factories/iodo_factory.py -> build/lib/stk/molecular/functional_groups/factories 2020-04-24T12:12:29,113 copying src/stk/molecular/functional_groups/factories/amide_factory.py -> build/lib/stk/molecular/functional_groups/factories 2020-04-24T12:12:29,118 copying src/stk/molecular/functional_groups/factories/carboxylic_acid_factory.py -> build/lib/stk/molecular/functional_groups/factories 2020-04-24T12:12:29,122 copying src/stk/molecular/functional_groups/factories/dibromo_factory.py -> build/lib/stk/molecular/functional_groups/factories 2020-04-24T12:12:29,127 copying src/stk/molecular/functional_groups/factories/alcohol_factory.py -> build/lib/stk/molecular/functional_groups/factories 2020-04-24T12:12:29,133 copying src/stk/molecular/functional_groups/factories/thioacid_factory.py -> build/lib/stk/molecular/functional_groups/factories 2020-04-24T12:12:29,139 copying src/stk/molecular/functional_groups/factories/boronic_acid_factory.py -> build/lib/stk/molecular/functional_groups/factories 2020-04-24T12:12:29,145 copying src/stk/molecular/functional_groups/factories/secondary_amino_factory.py -> build/lib/stk/molecular/functional_groups/factories 2020-04-24T12:12:29,151 copying src/stk/molecular/functional_groups/factories/terminal_alkene_factory.py -> build/lib/stk/molecular/functional_groups/factories 2020-04-24T12:12:29,157 copying src/stk/molecular/functional_groups/factories/primary_amino_factory.py -> build/lib/stk/molecular/functional_groups/factories 2020-04-24T12:12:29,163 copying src/stk/molecular/functional_groups/factories/fluoro_factory.py -> build/lib/stk/molecular/functional_groups/factories 2020-04-24T12:12:29,169 copying src/stk/molecular/functional_groups/factories/aldehyde_factory.py -> build/lib/stk/molecular/functional_groups/factories 2020-04-24T12:12:29,175 copying src/stk/molecular/functional_groups/factories/functional_group_factory.py -> build/lib/stk/molecular/functional_groups/factories 2020-04-24T12:12:29,182 copying src/stk/molecular/functional_groups/factories/ring_amine_factory.py -> build/lib/stk/molecular/functional_groups/factories 2020-04-24T12:12:29,188 copying src/stk/molecular/functional_groups/factories/terminal_alkyne_factory.py -> build/lib/stk/molecular/functional_groups/factories 2020-04-24T12:12:29,194 copying src/stk/molecular/functional_groups/factories/difluoro_factory.py -> build/lib/stk/molecular/functional_groups/factories 2020-04-24T12:12:29,200 copying src/stk/molecular/functional_groups/factories/utilities.py -> build/lib/stk/molecular/functional_groups/factories 2020-04-24T12:12:29,206 copying src/stk/molecular/functional_groups/factories/__init__.py -> build/lib/stk/molecular/functional_groups/factories 2020-04-24T12:12:29,212 copying src/stk/molecular/functional_groups/factories/diol_factory.py -> build/lib/stk/molecular/functional_groups/factories 2020-04-24T12:12:29,218 copying src/stk/molecular/functional_groups/factories/bromo_factory.py -> build/lib/stk/molecular/functional_groups/factories 2020-04-24T12:12:29,224 copying src/stk/molecular/functional_groups/factories/thiol_factory.py -> build/lib/stk/molecular/functional_groups/factories 2020-04-24T12:12:29,232 creating build/lib/stk/molecular/reactions/factories 2020-04-24T12:12:29,235 copying src/stk/molecular/reactions/factories/reaction_factory.py -> build/lib/stk/molecular/reactions/factories 2020-04-24T12:12:29,241 copying src/stk/molecular/reactions/factories/__init__.py -> build/lib/stk/molecular/reactions/factories 2020-04-24T12:12:29,247 copying src/stk/molecular/reactions/factories/generic_reaction_factory.py -> build/lib/stk/molecular/reactions/factories 2020-04-24T12:12:29,257 creating build/lib/stk/molecular/reactions/reactions 2020-04-24T12:12:29,260 copying src/stk/molecular/reactions/reactions/ring_amine_reaction.py -> build/lib/stk/molecular/reactions/reactions 2020-04-24T12:12:29,266 copying src/stk/molecular/reactions/reactions/two_two_reaction.py -> build/lib/stk/molecular/reactions/reactions 2020-04-24T12:12:29,272 copying src/stk/molecular/reactions/reactions/one_two_reaction.py -> build/lib/stk/molecular/reactions/reactions 2020-04-24T12:12:29,278 copying src/stk/molecular/reactions/reactions/one_one_reaction.py -> build/lib/stk/molecular/reactions/reactions 2020-04-24T12:12:29,283 copying src/stk/molecular/reactions/reactions/__init__.py -> build/lib/stk/molecular/reactions/reactions 2020-04-24T12:12:29,291 creating build/lib/stk/molecular/reactions/reactions/reaction 2020-04-24T12:12:29,293 copying src/stk/molecular/reactions/reactions/reaction/reaction.py -> build/lib/stk/molecular/reactions/reactions/reaction 2020-04-24T12:12:29,299 copying src/stk/molecular/reactions/reactions/reaction/new_atom.py -> build/lib/stk/molecular/reactions/reactions/reaction 2020-04-24T12:12:29,303 copying src/stk/molecular/reactions/reactions/reaction/reaction_result.py -> build/lib/stk/molecular/reactions/reactions/reaction 2020-04-24T12:12:29,308 copying src/stk/molecular/reactions/reactions/reaction/__init__.py -> build/lib/stk/molecular/reactions/reactions/reaction 2020-04-24T12:12:29,315 creating build/lib/stk/serialization/json 2020-04-24T12:12:29,317 copying src/stk/serialization/json/__init__.py -> build/lib/stk/serialization/json 2020-04-24T12:12:29,326 creating build/lib/stk/serialization/json/deserializers 2020-04-24T12:12:29,329 copying src/stk/serialization/json/deserializers/constructed_molecule.py -> build/lib/stk/serialization/json/deserializers 2020-04-24T12:12:29,334 copying src/stk/serialization/json/deserializers/utilities.py -> build/lib/stk/serialization/json/deserializers 2020-04-24T12:12:29,338 copying src/stk/serialization/json/deserializers/__init__.py -> build/lib/stk/serialization/json/deserializers 2020-04-24T12:12:29,342 copying src/stk/serialization/json/deserializers/molecule.py -> build/lib/stk/serialization/json/deserializers 2020-04-24T12:12:29,348 creating build/lib/stk/serialization/json/serializers 2020-04-24T12:12:29,350 copying src/stk/serialization/json/serializers/__init__.py -> build/lib/stk/serialization/json/serializers 2020-04-24T12:12:29,358 creating build/lib/stk/serialization/json/serializers/molecule 2020-04-24T12:12:29,361 copying src/stk/serialization/json/serializers/molecule/utilities.py -> build/lib/stk/serialization/json/serializers/molecule 2020-04-24T12:12:29,366 copying src/stk/serialization/json/serializers/molecule/__init__.py -> build/lib/stk/serialization/json/serializers/molecule 2020-04-24T12:12:29,372 copying src/stk/serialization/json/serializers/molecule/molecule.py -> build/lib/stk/serialization/json/serializers/molecule 2020-04-24T12:12:29,380 creating build/lib/stk/serialization/json/serializers/constructed_molecule 2020-04-24T12:12:29,383 copying src/stk/serialization/json/serializers/constructed_molecule/constructed_molecule.py -> build/lib/stk/serialization/json/serializers/constructed_molecule 2020-04-24T12:12:29,390 copying src/stk/serialization/json/serializers/constructed_molecule/__init__.py -> build/lib/stk/serialization/json/serializers/constructed_molecule 2020-04-24T12:12:29,398 creating build/lib/stk/ea/plotters 2020-04-24T12:12:29,401 copying src/stk/ea/plotters/progress.py -> build/lib/stk/ea/plotters 2020-04-24T12:12:29,408 copying src/stk/ea/plotters/selection.py -> build/lib/stk/ea/plotters 2020-04-24T12:12:29,414 copying src/stk/ea/plotters/__init__.py -> build/lib/stk/ea/plotters 2020-04-24T12:12:29,422 creating build/lib/stk/ea/crossover 2020-04-24T12:12:29,424 copying src/stk/ea/crossover/__init__.py -> build/lib/stk/ea/crossover 2020-04-24T12:12:29,434 creating build/lib/stk/ea/fitness_normalizers 2020-04-24T12:12:29,437 copying src/stk/ea/fitness_normalizers/add.py -> build/lib/stk/ea/fitness_normalizers 2020-04-24T12:12:29,442 copying src/stk/ea/fitness_normalizers/null.py -> build/lib/stk/ea/fitness_normalizers 2020-04-24T12:12:29,446 copying src/stk/ea/fitness_normalizers/fitness_normalizer.py -> build/lib/stk/ea/fitness_normalizers 2020-04-24T12:12:29,451 copying src/stk/ea/fitness_normalizers/multiply.py -> build/lib/stk/ea/fitness_normalizers 2020-04-24T12:12:29,456 copying src/stk/ea/fitness_normalizers/replace_fitness.py -> build/lib/stk/ea/fitness_normalizers 2020-04-24T12:12:29,462 copying src/stk/ea/fitness_normalizers/sequence.py -> build/lib/stk/ea/fitness_normalizers 2020-04-24T12:12:29,467 copying src/stk/ea/fitness_normalizers/divide_by_mean.py -> build/lib/stk/ea/fitness_normalizers 2020-04-24T12:12:29,473 copying src/stk/ea/fitness_normalizers/sum.py -> build/lib/stk/ea/fitness_normalizers 2020-04-24T12:12:29,479 copying src/stk/ea/fitness_normalizers/shift_up.py -> build/lib/stk/ea/fitness_normalizers 2020-04-24T12:12:29,486 copying src/stk/ea/fitness_normalizers/power.py -> build/lib/stk/ea/fitness_normalizers 2020-04-24T12:12:29,493 copying src/stk/ea/fitness_normalizers/__init__.py -> build/lib/stk/ea/fitness_normalizers 2020-04-24T12:12:29,500 creating build/lib/stk/ea/mutation 2020-04-24T12:12:29,502 copying src/stk/ea/mutation/__init__.py -> build/lib/stk/ea/mutation 2020-04-24T12:12:29,510 creating build/lib/stk/ea/evolutionary_algorithm 2020-04-24T12:12:29,513 copying src/stk/ea/evolutionary_algorithm/evolutionary_algorithm.py -> build/lib/stk/ea/evolutionary_algorithm 2020-04-24T12:12:29,520 copying src/stk/ea/evolutionary_algorithm/__init__.py -> build/lib/stk/ea/evolutionary_algorithm 2020-04-24T12:12:29,527 creating build/lib/stk/ea/selection 2020-04-24T12:12:29,530 copying src/stk/ea/selection/__init__.py -> build/lib/stk/ea/selection 2020-04-24T12:12:29,536 copying src/stk/ea/selection/batch.py -> build/lib/stk/ea/selection 2020-04-24T12:12:29,544 creating build/lib/stk/ea/molecule_records 2020-04-24T12:12:29,547 copying src/stk/ea/molecule_records/__init__.py -> build/lib/stk/ea/molecule_records 2020-04-24T12:12:29,553 copying src/stk/ea/molecule_records/molecule.py -> build/lib/stk/ea/molecule_records 2020-04-24T12:12:29,562 creating build/lib/stk/ea/fitness_calculators 2020-04-24T12:12:29,565 copying src/stk/ea/fitness_calculators/property_vector.py -> build/lib/stk/ea/fitness_calculators 2020-04-24T12:12:29,572 copying src/stk/ea/fitness_calculators/fitness_function.py -> build/lib/stk/ea/fitness_calculators 2020-04-24T12:12:29,579 copying src/stk/ea/fitness_calculators/__init__.py -> build/lib/stk/ea/fitness_calculators 2020-04-24T12:12:29,584 copying src/stk/ea/fitness_calculators/fitness_calculator.py -> build/lib/stk/ea/fitness_calculators 2020-04-24T12:12:29,592 creating build/lib/stk/ea/crossover/crossers 2020-04-24T12:12:29,595 copying src/stk/ea/crossover/crossers/__init__.py -> build/lib/stk/ea/crossover/crossers 2020-04-24T12:12:29,602 creating build/lib/stk/ea/crossover/records 2020-04-24T12:12:29,606 copying src/stk/ea/crossover/records/record.py -> build/lib/stk/ea/crossover/records 2020-04-24T12:12:29,612 copying src/stk/ea/crossover/records/__init__.py -> build/lib/stk/ea/crossover/records 2020-04-24T12:12:29,619 creating build/lib/stk/ea/crossover/crossers/molecule 2020-04-24T12:12:29,622 copying src/stk/ea/crossover/crossers/molecule/crosser.py -> build/lib/stk/ea/crossover/crossers/molecule 2020-04-24T12:12:29,626 copying src/stk/ea/crossover/crossers/molecule/__init__.py -> build/lib/stk/ea/crossover/crossers/molecule 2020-04-24T12:12:29,630 copying src/stk/ea/crossover/crossers/molecule/genetic_recombination.py -> build/lib/stk/ea/crossover/crossers/molecule 2020-04-24T12:12:29,637 creating build/lib/stk/ea/crossover/crossers/compound 2020-04-24T12:12:29,639 copying src/stk/ea/crossover/crossers/compound/random.py -> build/lib/stk/ea/crossover/crossers/compound 2020-04-24T12:12:29,645 copying src/stk/ea/crossover/crossers/compound/__init__.py -> build/lib/stk/ea/crossover/crossers/compound 2020-04-24T12:12:29,652 creating build/lib/stk/ea/mutation/records 2020-04-24T12:12:29,655 copying src/stk/ea/mutation/records/record.py -> build/lib/stk/ea/mutation/records 2020-04-24T12:12:29,661 copying src/stk/ea/mutation/records/__init__.py -> build/lib/stk/ea/mutation/records 2020-04-24T12:12:29,668 creating build/lib/stk/ea/mutation/mutators 2020-04-24T12:12:29,671 copying src/stk/ea/mutation/mutators/__init__.py -> build/lib/stk/ea/mutation/mutators 2020-04-24T12:12:29,679 creating build/lib/stk/ea/mutation/mutators/molecule 2020-04-24T12:12:29,682 copying src/stk/ea/mutation/mutators/molecule/random_building_block.py -> build/lib/stk/ea/mutation/mutators/molecule 2020-04-24T12:12:29,687 copying src/stk/ea/mutation/mutators/molecule/mutator.py -> build/lib/stk/ea/mutation/mutators/molecule 2020-04-24T12:12:29,692 copying src/stk/ea/mutation/mutators/molecule/random_topology_graph.py -> build/lib/stk/ea/mutation/mutators/molecule 2020-04-24T12:12:29,696 copying src/stk/ea/mutation/mutators/molecule/__init__.py -> build/lib/stk/ea/mutation/mutators/molecule 2020-04-24T12:12:29,700 copying src/stk/ea/mutation/mutators/molecule/similar_building_block.py -> build/lib/stk/ea/mutation/mutators/molecule 2020-04-24T12:12:29,709 creating build/lib/stk/ea/mutation/mutators/compound 2020-04-24T12:12:29,712 copying src/stk/ea/mutation/mutators/compound/random.py -> build/lib/stk/ea/mutation/mutators/compound 2020-04-24T12:12:29,718 copying src/stk/ea/mutation/mutators/compound/__init__.py -> build/lib/stk/ea/mutation/mutators/compound 2020-04-24T12:12:29,726 creating build/lib/stk/ea/evolutionary_algorithm/implementations 2020-04-24T12:12:29,729 copying src/stk/ea/evolutionary_algorithm/implementations/parallel.py -> build/lib/stk/ea/evolutionary_algorithm/implementations 2020-04-24T12:12:29,735 copying src/stk/ea/evolutionary_algorithm/implementations/serial.py -> build/lib/stk/ea/evolutionary_algorithm/implementations 2020-04-24T12:12:29,740 copying src/stk/ea/evolutionary_algorithm/implementations/implementation.py -> build/lib/stk/ea/evolutionary_algorithm/implementations 2020-04-24T12:12:29,745 copying src/stk/ea/evolutionary_algorithm/implementations/__init__.py -> build/lib/stk/ea/evolutionary_algorithm/implementations 2020-04-24T12:12:29,751 creating build/lib/stk/ea/selection/selectors 2020-04-24T12:12:29,753 copying src/stk/ea/selection/selectors/filter_batches.py -> build/lib/stk/ea/selection/selectors 2020-04-24T12:12:29,758 copying src/stk/ea/selection/selectors/best.py -> build/lib/stk/ea/selection/selectors 2020-04-24T12:12:29,763 copying src/stk/ea/selection/selectors/filter_molecules.py -> build/lib/stk/ea/selection/selectors 2020-04-24T12:12:29,769 copying src/stk/ea/selection/selectors/tournament.py -> build/lib/stk/ea/selection/selectors 2020-04-24T12:12:29,775 copying src/stk/ea/selection/selectors/stochastic_universal_sampling.py -> build/lib/stk/ea/selection/selectors 2020-04-24T12:12:29,782 copying src/stk/ea/selection/selectors/remove_molecules.py -> build/lib/stk/ea/selection/selectors 2020-04-24T12:12:29,788 copying src/stk/ea/selection/selectors/remove_batches.py -> build/lib/stk/ea/selection/selectors 2020-04-24T12:12:29,794 copying src/stk/ea/selection/selectors/above_average.py -> build/lib/stk/ea/selection/selectors 2020-04-24T12:12:29,801 copying src/stk/ea/selection/selectors/selector.py -> build/lib/stk/ea/selection/selectors 2020-04-24T12:12:29,808 copying src/stk/ea/selection/selectors/worst.py -> build/lib/stk/ea/selection/selectors 2020-04-24T12:12:29,814 copying src/stk/ea/selection/selectors/roulette.py -> build/lib/stk/ea/selection/selectors 2020-04-24T12:12:29,820 copying src/stk/ea/selection/selectors/__init__.py -> build/lib/stk/ea/selection/selectors 2020-04-24T12:12:29,828 creating build/lib/stk/ea/selection/selectors/utilities 2020-04-24T12:12:29,830 copying src/stk/ea/selection/selectors/utilities/__init__.py -> build/lib/stk/ea/selection/selectors/utilities 2020-04-24T12:12:29,836 copying src/stk/ea/selection/selectors/utilities/yielded_batches.py -> build/lib/stk/ea/selection/selectors/utilities 2020-04-24T12:12:29,945 installing to build/bdist.linux-armv7l/wheel 2020-04-24T12:12:29,946 running install 2020-04-24T12:12:29,948 running install_lib 2020-04-24T12:12:29,955 creating build/bdist.linux-armv7l 2020-04-24T12:12:29,956 creating build/bdist.linux-armv7l/wheel 2020-04-24T12:12:29,960 creating build/bdist.linux-armv7l/wheel/stk 2020-04-24T12:12:29,964 creating build/bdist.linux-armv7l/wheel/stk/databases 2020-04-24T12:12:29,968 creating build/bdist.linux-armv7l/wheel/stk/databases/mongo_db 2020-04-24T12:12:29,970 copying build/lib/stk/databases/mongo_db/constructed_molecule.py -> build/bdist.linux-armv7l/wheel/stk/databases/mongo_db 2020-04-24T12:12:29,978 copying build/lib/stk/databases/mongo_db/value.py -> build/bdist.linux-armv7l/wheel/stk/databases/mongo_db 2020-04-24T12:12:29,985 copying build/lib/stk/databases/mongo_db/utilities.py -> build/bdist.linux-armv7l/wheel/stk/databases/mongo_db 2020-04-24T12:12:29,991 copying build/lib/stk/databases/mongo_db/__init__.py -> build/bdist.linux-armv7l/wheel/stk/databases/mongo_db 2020-04-24T12:12:29,996 copying build/lib/stk/databases/mongo_db/molecule.py -> build/bdist.linux-armv7l/wheel/stk/databases/mongo_db 2020-04-24T12:12:30,003 copying build/lib/stk/databases/constructed_molecule.py -> build/bdist.linux-armv7l/wheel/stk/databases 2020-04-24T12:12:30,009 copying build/lib/stk/databases/value.py -> build/bdist.linux-armv7l/wheel/stk/databases 2020-04-24T12:12:30,014 copying build/lib/stk/databases/__init__.py -> build/bdist.linux-armv7l/wheel/stk/databases 2020-04-24T12:12:30,020 copying build/lib/stk/databases/molecule.py -> build/bdist.linux-armv7l/wheel/stk/databases 2020-04-24T12:12:30,027 creating build/bdist.linux-armv7l/wheel/stk/utilities 2020-04-24T12:12:30,030 copying build/lib/stk/utilities/utilities.py -> build/bdist.linux-armv7l/wheel/stk/utilities 2020-04-24T12:12:30,045 copying build/lib/stk/utilities/__init__.py -> build/bdist.linux-armv7l/wheel/stk/utilities 2020-04-24T12:12:30,050 copying build/lib/stk/__init__.py -> build/bdist.linux-armv7l/wheel/stk 2020-04-24T12:12:30,059 creating build/bdist.linux-armv7l/wheel/stk/molecular 2020-04-24T12:12:30,064 creating build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs 2020-04-24T12:12:30,069 creating build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/cof 2020-04-24T12:12:30,072 copying build/lib/stk/molecular/topology_graphs/cof/hexagonal.py -> build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/cof 2020-04-24T12:12:30,079 copying build/lib/stk/molecular/topology_graphs/cof/square.py -> build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/cof 2020-04-24T12:12:30,085 copying build/lib/stk/molecular/topology_graphs/cof/edge.py -> build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/cof 2020-04-24T12:12:30,091 copying build/lib/stk/molecular/topology_graphs/cof/linkerless_honeycomb.py -> build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/cof 2020-04-24T12:12:30,096 copying build/lib/stk/molecular/topology_graphs/cof/cof.py -> build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/cof 2020-04-24T12:12:30,104 copying build/lib/stk/molecular/topology_graphs/cof/__init__.py -> build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/cof 2020-04-24T12:12:30,110 copying build/lib/stk/molecular/topology_graphs/cof/vertices.py -> build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/cof 2020-04-24T12:12:30,116 copying build/lib/stk/molecular/topology_graphs/cof/kagome.py -> build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/cof 2020-04-24T12:12:30,122 copying build/lib/stk/molecular/topology_graphs/cof/honeycomb.py -> build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/cof 2020-04-24T12:12:30,130 creating build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/polymer 2020-04-24T12:12:30,134 creating build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/polymer/linear 2020-04-24T12:12:30,137 copying build/lib/stk/molecular/topology_graphs/polymer/linear/linear.py -> build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/polymer/linear 2020-04-24T12:12:30,145 copying build/lib/stk/molecular/topology_graphs/polymer/linear/__init__.py -> build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/polymer/linear 2020-04-24T12:12:30,150 copying build/lib/stk/molecular/topology_graphs/polymer/linear/vertices.py -> build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/polymer/linear 2020-04-24T12:12:30,157 copying build/lib/stk/molecular/topology_graphs/polymer/__init__.py -> build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/polymer 2020-04-24T12:12:30,164 creating build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/host_guest 2020-04-24T12:12:30,167 copying build/lib/stk/molecular/topology_graphs/host_guest/complex.py -> build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/host_guest 2020-04-24T12:12:30,174 copying build/lib/stk/molecular/topology_graphs/host_guest/__init__.py -> build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/host_guest 2020-04-24T12:12:30,180 copying build/lib/stk/molecular/topology_graphs/host_guest/vertices.py -> build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/host_guest 2020-04-24T12:12:30,187 creating build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/macrocycle 2020-04-24T12:12:30,190 copying build/lib/stk/molecular/topology_graphs/macrocycle/macrocycle.py -> build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/macrocycle 2020-04-24T12:12:30,198 copying build/lib/stk/molecular/topology_graphs/macrocycle/__init__.py -> build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/macrocycle 2020-04-24T12:12:30,203 copying build/lib/stk/molecular/topology_graphs/macrocycle/vertices.py -> build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/macrocycle 2020-04-24T12:12:30,211 creating build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/utilities 2020-04-24T12:12:30,213 copying build/lib/stk/molecular/topology_graphs/utilities/edge_sorter.py -> build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/utilities 2020-04-24T12:12:30,219 copying build/lib/stk/molecular/topology_graphs/utilities/functional_group_sorter.py -> build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/utilities 2020-04-24T12:12:30,225 copying build/lib/stk/molecular/topology_graphs/utilities/sorter.py -> build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/utilities 2020-04-24T12:12:30,231 copying build/lib/stk/molecular/topology_graphs/utilities/__init__.py -> build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/utilities 2020-04-24T12:12:30,236 copying build/lib/stk/molecular/topology_graphs/__init__.py -> build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs 2020-04-24T12:12:30,243 creating build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/topology_graph 2020-04-24T12:12:30,246 copying build/lib/stk/molecular/topology_graphs/topology_graph/construction_result.py -> build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/topology_graph 2020-04-24T12:12:30,254 creating build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/topology_graph/construction_state 2020-04-24T12:12:30,258 creating build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/topology_graph/construction_state/molecule_state 2020-04-24T12:12:30,261 copying build/lib/stk/molecular/topology_graphs/topology_graph/construction_state/molecule_state/deletions_summary.py -> build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/topology_graph/construction_state/molecule_state 2020-04-24T12:12:30,268 copying build/lib/stk/molecular/topology_graphs/topology_graph/construction_state/molecule_state/molecule_state.py -> build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/topology_graph/construction_state/molecule_state 2020-04-24T12:12:30,277 creating build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/topology_graph/construction_state/molecule_state/reactions_summary 2020-04-24T12:12:30,280 copying build/lib/stk/molecular/topology_graphs/topology_graph/construction_state/molecule_state/reactions_summary/reactions_summary.py -> build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/topology_graph/construction_state/molecule_state/reactions_summary 2020-04-24T12:12:30,288 copying build/lib/stk/molecular/topology_graphs/topology_graph/construction_state/molecule_state/reactions_summary/atom_batch.py -> build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/topology_graph/construction_state/molecule_state/reactions_summary 2020-04-24T12:12:30,294 copying build/lib/stk/molecular/topology_graphs/topology_graph/construction_state/molecule_state/reactions_summary/bond_batch.py -> build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/topology_graph/construction_state/molecule_state/reactions_summary 2020-04-24T12:12:30,301 copying build/lib/stk/molecular/topology_graphs/topology_graph/construction_state/molecule_state/reactions_summary/__init__.py -> build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/topology_graph/construction_state/molecule_state/reactions_summary 2020-04-24T12:12:30,310 creating build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/topology_graph/construction_state/molecule_state/placements_summary 2020-04-24T12:12:30,313 copying build/lib/stk/molecular/topology_graphs/topology_graph/construction_state/molecule_state/placements_summary/atom_batch.py -> build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/topology_graph/construction_state/molecule_state/placements_summary 2020-04-24T12:12:30,320 copying build/lib/stk/molecular/topology_graphs/topology_graph/construction_state/molecule_state/placements_summary/placements_summary.py -> build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/topology_graph/construction_state/molecule_state/placements_summary 2020-04-24T12:12:30,326 copying build/lib/stk/molecular/topology_graphs/topology_graph/construction_state/molecule_state/placements_summary/bond_batch.py -> build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/topology_graph/construction_state/molecule_state/placements_summary 2020-04-24T12:12:30,331 copying build/lib/stk/molecular/topology_graphs/topology_graph/construction_state/molecule_state/placements_summary/__init__.py -> build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/topology_graph/construction_state/molecule_state/placements_summary 2020-04-24T12:12:30,336 copying build/lib/stk/molecular/topology_graphs/topology_graph/construction_state/molecule_state/__init__.py -> build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/topology_graph/construction_state/molecule_state 2020-04-24T12:12:30,343 copying build/lib/stk/molecular/topology_graphs/topology_graph/construction_state/construction_state.py -> build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/topology_graph/construction_state 2020-04-24T12:12:30,350 copying build/lib/stk/molecular/topology_graphs/topology_graph/construction_state/graph_state.py -> build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/topology_graph/construction_state 2020-04-24T12:12:30,357 copying build/lib/stk/molecular/topology_graphs/topology_graph/construction_state/__init__.py -> build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/topology_graph/construction_state 2020-04-24T12:12:30,362 copying build/lib/stk/molecular/topology_graphs/topology_graph/edge_group.py -> build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/topology_graph 2020-04-24T12:12:30,368 copying build/lib/stk/molecular/topology_graphs/topology_graph/edge.py -> build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/topology_graph 2020-04-24T12:12:30,374 copying build/lib/stk/molecular/topology_graphs/topology_graph/vertex.py -> build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/topology_graph 2020-04-24T12:12:30,381 copying build/lib/stk/molecular/topology_graphs/topology_graph/__init__.py -> build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/topology_graph 2020-04-24T12:12:30,388 creating build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/topology_graph/topology_graph 2020-04-24T12:12:30,391 copying build/lib/stk/molecular/topology_graphs/topology_graph/topology_graph/topology_graph.py -> build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/topology_graph/topology_graph 2020-04-24T12:12:30,401 creating build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/topology_graph/topology_graph/implementations 2020-04-24T12:12:30,403 copying build/lib/stk/molecular/topology_graphs/topology_graph/topology_graph/implementations/parallel.py -> build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/topology_graph/topology_graph/implementations 2020-04-24T12:12:30,408 copying build/lib/stk/molecular/topology_graphs/topology_graph/topology_graph/implementations/serial.py -> build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/topology_graph/topology_graph/implementations 2020-04-24T12:12:30,412 copying build/lib/stk/molecular/topology_graphs/topology_graph/topology_graph/implementations/utilities.py -> build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/topology_graph/topology_graph/implementations 2020-04-24T12:12:30,417 copying build/lib/stk/molecular/topology_graphs/topology_graph/topology_graph/implementations/__init__.py -> build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/topology_graph/topology_graph/implementations 2020-04-24T12:12:30,423 copying build/lib/stk/molecular/topology_graphs/topology_graph/topology_graph/__init__.py -> build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/topology_graph/topology_graph 2020-04-24T12:12:30,430 creating build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/cage 2020-04-24T12:12:30,435 creating build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/cage/three_plus_three 2020-04-24T12:12:30,438 copying build/lib/stk/molecular/topology_graphs/cage/three_plus_three/four_plus_four.py -> build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/cage/three_plus_three 2020-04-24T12:12:30,443 copying build/lib/stk/molecular/topology_graphs/cage/three_plus_three/one_plus_one.py -> build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/cage/three_plus_three 2020-04-24T12:12:30,448 copying build/lib/stk/molecular/topology_graphs/cage/three_plus_three/two_plus_two.py -> build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/cage/three_plus_three 2020-04-24T12:12:30,452 copying build/lib/stk/molecular/topology_graphs/cage/three_plus_three/__init__.py -> build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/cage/three_plus_three 2020-04-24T12:12:30,457 copying build/lib/stk/molecular/topology_graphs/cage/cage_construction_state.py -> build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/cage 2020-04-24T12:12:30,465 creating build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/cage/three_plus_four 2020-04-24T12:12:30,468 copying build/lib/stk/molecular/topology_graphs/cage/three_plus_four/six_plus_eight.py -> build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/cage/three_plus_four 2020-04-24T12:12:30,475 copying build/lib/stk/molecular/topology_graphs/cage/three_plus_four/__init__.py -> build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/cage/three_plus_four 2020-04-24T12:12:30,482 creating build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/cage/two_plus_five 2020-04-24T12:12:30,484 copying build/lib/stk/molecular/topology_graphs/cage/two_plus_five/twelve_plus_thirty.py -> build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/cage/two_plus_five 2020-04-24T12:12:30,490 copying build/lib/stk/molecular/topology_graphs/cage/two_plus_five/__init__.py -> build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/cage/two_plus_five 2020-04-24T12:12:30,495 creating build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/cage/two_plus_four 2020-04-24T12:12:30,498 copying build/lib/stk/molecular/topology_graphs/cage/two_plus_four/four_plus_eight.py -> build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/cage/two_plus_four 2020-04-24T12:12:30,504 copying build/lib/stk/molecular/topology_graphs/cage/two_plus_four/eight_plus_sixteen.py -> build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/cage/two_plus_four 2020-04-24T12:12:30,510 copying build/lib/stk/molecular/topology_graphs/cage/two_plus_four/five_plus_ten.py -> build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/cage/two_plus_four 2020-04-24T12:12:30,517 copying build/lib/stk/molecular/topology_graphs/cage/two_plus_four/two_plus_four.py -> build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/cage/two_plus_four 2020-04-24T12:12:30,522 copying build/lib/stk/molecular/topology_graphs/cage/two_plus_four/six_plus_twelve.py -> build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/cage/two_plus_four 2020-04-24T12:12:30,527 copying build/lib/stk/molecular/topology_graphs/cage/two_plus_four/__init__.py -> build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/cage/two_plus_four 2020-04-24T12:12:30,532 copying build/lib/stk/molecular/topology_graphs/cage/two_plus_four/ten_plus_twenty.py -> build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/cage/two_plus_four 2020-04-24T12:12:30,538 copying build/lib/stk/molecular/topology_graphs/cage/two_plus_four/three_plus_six.py -> build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/cage/two_plus_four 2020-04-24T12:12:30,543 copying build/lib/stk/molecular/topology_graphs/cage/__init__.py -> build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/cage 2020-04-24T12:12:30,548 copying build/lib/stk/molecular/topology_graphs/cage/vertices.py -> build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/cage 2020-04-24T12:12:30,554 copying build/lib/stk/molecular/topology_graphs/cage/cage.py -> build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/cage 2020-04-24T12:12:30,565 creating build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/cage/two_plus_three 2020-04-24T12:12:30,569 copying build/lib/stk/molecular/topology_graphs/cage/two_plus_three/eight_plus_twelve.py -> build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/cage/two_plus_three 2020-04-24T12:12:30,577 copying build/lib/stk/molecular/topology_graphs/cage/two_plus_three/two_plus_three.py -> build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/cage/two_plus_three 2020-04-24T12:12:30,584 copying build/lib/stk/molecular/topology_graphs/cage/two_plus_three/four_plus_six_2.py -> build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/cage/two_plus_three 2020-04-24T12:12:30,589 copying build/lib/stk/molecular/topology_graphs/cage/two_plus_three/four_plus_six.py -> build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/cage/two_plus_three 2020-04-24T12:12:30,594 copying build/lib/stk/molecular/topology_graphs/cage/two_plus_three/twenty_plus_thirty.py -> build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/cage/two_plus_three 2020-04-24T12:12:30,601 copying build/lib/stk/molecular/topology_graphs/cage/two_plus_three/__init__.py -> build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/cage/two_plus_three 2020-04-24T12:12:30,608 copying build/lib/stk/molecular/topology_graphs/cage/two_plus_three/six_plus_nine.py -> build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/cage/two_plus_three 2020-04-24T12:12:30,616 creating build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/rotaxane 2020-04-24T12:12:30,620 copying build/lib/stk/molecular/topology_graphs/rotaxane/nrotaxane.py -> build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/rotaxane 2020-04-24T12:12:30,628 copying build/lib/stk/molecular/topology_graphs/rotaxane/__init__.py -> build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/rotaxane 2020-04-24T12:12:30,633 copying build/lib/stk/molecular/topology_graphs/rotaxane/vertices.py -> build/bdist.linux-armv7l/wheel/stk/molecular/topology_graphs/rotaxane 2020-04-24T12:12:30,640 creating build/bdist.linux-armv7l/wheel/stk/molecular/molecules 2020-04-24T12:12:30,644 creating build/bdist.linux-armv7l/wheel/stk/molecular/molecules/molecule 2020-04-24T12:12:30,650 creating build/bdist.linux-armv7l/wheel/stk/molecular/molecules/molecule/utilities 2020-04-24T12:12:30,656 creating build/bdist.linux-armv7l/wheel/stk/molecular/molecules/molecule/utilities/writers 2020-04-24T12:12:30,660 copying build/lib/stk/molecular/molecules/molecule/utilities/writers/pdb.py -> build/bdist.linux-armv7l/wheel/stk/molecular/molecules/molecule/utilities/writers 2020-04-24T12:12:30,667 copying build/lib/stk/molecular/molecules/molecule/utilities/writers/xyz.py -> build/bdist.linux-armv7l/wheel/stk/molecular/molecules/molecule/utilities/writers 2020-04-24T12:12:30,672 copying build/lib/stk/molecular/molecules/molecule/utilities/writers/__init__.py -> build/bdist.linux-armv7l/wheel/stk/molecular/molecules/molecule/utilities/writers 2020-04-24T12:12:30,677 copying build/lib/stk/molecular/molecules/molecule/utilities/writers/mdl_mol.py -> build/bdist.linux-armv7l/wheel/stk/molecular/molecules/molecule/utilities/writers 2020-04-24T12:12:30,683 creating build/bdist.linux-armv7l/wheel/stk/molecular/molecules/molecule/utilities/updaters 2020-04-24T12:12:30,687 copying build/lib/stk/molecular/molecules/molecule/utilities/updaters/turbomole.py -> build/bdist.linux-armv7l/wheel/stk/molecular/molecules/molecule/utilities/updaters 2020-04-24T12:12:30,695 copying build/lib/stk/molecular/molecules/molecule/utilities/updaters/mae.py -> build/bdist.linux-armv7l/wheel/stk/molecular/molecules/molecule/utilities/updaters 2020-04-24T12:12:30,701 copying build/lib/stk/molecular/molecules/molecule/utilities/updaters/xyz.py -> build/bdist.linux-armv7l/wheel/stk/molecular/molecules/molecule/utilities/updaters 2020-04-24T12:12:30,708 copying build/lib/stk/molecular/molecules/molecule/utilities/updaters/__init__.py -> build/bdist.linux-armv7l/wheel/stk/molecular/molecules/molecule/utilities/updaters 2020-04-24T12:12:30,713 copying build/lib/stk/molecular/molecules/molecule/utilities/updaters/mdl_mol.py -> build/bdist.linux-armv7l/wheel/stk/molecular/molecules/molecule/utilities/updaters 2020-04-24T12:12:30,718 copying build/lib/stk/molecular/molecules/molecule/utilities/__init__.py -> build/bdist.linux-armv7l/wheel/stk/molecular/molecules/molecule/utilities 2020-04-24T12:12:30,723 copying build/lib/stk/molecular/molecules/molecule/__init__.py -> build/bdist.linux-armv7l/wheel/stk/molecular/molecules/molecule 2020-04-24T12:12:30,729 copying build/lib/stk/molecular/molecules/molecule/molecule.py -> build/bdist.linux-armv7l/wheel/stk/molecular/molecules/molecule 2020-04-24T12:12:30,738 copying build/lib/stk/molecular/molecules/constructed_molecule.py -> build/bdist.linux-armv7l/wheel/stk/molecular/molecules 2020-04-24T12:12:30,746 copying build/lib/stk/molecular/molecules/__init__.py -> build/bdist.linux-armv7l/wheel/stk/molecular/molecules 2020-04-24T12:12:30,751 copying build/lib/stk/molecular/molecules/building_block.py -> build/bdist.linux-armv7l/wheel/stk/molecular/molecules 2020-04-24T12:12:30,760 creating build/bdist.linux-armv7l/wheel/stk/molecular/functional_groups 2020-04-24T12:12:30,765 creating build/bdist.linux-armv7l/wheel/stk/molecular/functional_groups/functional_groups 2020-04-24T12:12:30,769 copying build/lib/stk/molecular/functional_groups/functional_groups/primary_amino.py -> build/bdist.linux-armv7l/wheel/stk/molecular/functional_groups/functional_groups 2020-04-24T12:12:30,776 copying build/lib/stk/molecular/functional_groups/functional_groups/boronic_acid.py -> build/bdist.linux-armv7l/wheel/stk/molecular/functional_groups/functional_groups 2020-04-24T12:12:30,784 copying build/lib/stk/molecular/functional_groups/functional_groups/diol.py -> build/bdist.linux-armv7l/wheel/stk/molecular/functional_groups/functional_groups 2020-04-24T12:12:30,791 copying build/lib/stk/molecular/functional_groups/functional_groups/thioacid.py -> build/bdist.linux-armv7l/wheel/stk/molecular/functional_groups/functional_groups 2020-04-24T12:12:30,797 copying build/lib/stk/molecular/functional_groups/functional_groups/fluoro.py -> build/bdist.linux-armv7l/wheel/stk/molecular/functional_groups/functional_groups 2020-04-24T12:12:30,802 copying build/lib/stk/molecular/functional_groups/functional_groups/alkyne.py -> build/bdist.linux-armv7l/wheel/stk/molecular/functional_groups/functional_groups 2020-04-24T12:12:30,808 copying build/lib/stk/molecular/functional_groups/functional_groups/functional_group.py -> build/bdist.linux-armv7l/wheel/stk/molecular/functional_groups/functional_groups 2020-04-24T12:12:30,815 copying build/lib/stk/molecular/functional_groups/functional_groups/ring_amine.py -> build/bdist.linux-armv7l/wheel/stk/molecular/functional_groups/functional_groups 2020-04-24T12:12:30,822 copying build/lib/stk/molecular/functional_groups/functional_groups/difluoro.py -> build/bdist.linux-armv7l/wheel/stk/molecular/functional_groups/functional_groups 2020-04-24T12:12:30,828 copying build/lib/stk/molecular/functional_groups/functional_groups/thiol.py -> build/bdist.linux-armv7l/wheel/stk/molecular/functional_groups/functional_groups 2020-04-24T12:12:30,834 copying build/lib/stk/molecular/functional_groups/functional_groups/iodo.py -> build/bdist.linux-armv7l/wheel/stk/molecular/functional_groups/functional_groups 2020-04-24T12:12:30,839 copying build/lib/stk/molecular/functional_groups/functional_groups/carboxylic_acid.py -> build/bdist.linux-armv7l/wheel/stk/molecular/functional_groups/functional_groups 2020-04-24T12:12:30,845 copying build/lib/stk/molecular/functional_groups/functional_groups/dibromo.py -> build/bdist.linux-armv7l/wheel/stk/molecular/functional_groups/functional_groups 2020-04-24T12:12:30,851 copying build/lib/stk/molecular/functional_groups/functional_groups/secondary_amino.py -> build/bdist.linux-armv7l/wheel/stk/molecular/functional_groups/functional_groups 2020-04-24T12:12:30,857 copying build/lib/stk/molecular/functional_groups/functional_groups/generic_functional_group.py -> build/bdist.linux-armv7l/wheel/stk/molecular/functional_groups/functional_groups 2020-04-24T12:12:30,863 copying build/lib/stk/molecular/functional_groups/functional_groups/aldehyde.py -> build/bdist.linux-armv7l/wheel/stk/molecular/functional_groups/functional_groups 2020-04-24T12:12:30,869 copying build/lib/stk/molecular/functional_groups/functional_groups/alkene.py -> build/bdist.linux-armv7l/wheel/stk/molecular/functional_groups/functional_groups 2020-04-24T12:12:30,875 copying build/lib/stk/molecular/functional_groups/functional_groups/amide.py -> build/bdist.linux-armv7l/wheel/stk/molecular/functional_groups/functional_groups 2020-04-24T12:12:30,882 copying build/lib/stk/molecular/functional_groups/functional_groups/alcohol.py -> build/bdist.linux-armv7l/wheel/stk/molecular/functional_groups/functional_groups 2020-04-24T12:12:30,888 copying build/lib/stk/molecular/functional_groups/functional_groups/__init__.py -> build/bdist.linux-armv7l/wheel/stk/molecular/functional_groups/functional_groups 2020-04-24T12:12:30,893 copying build/lib/stk/molecular/functional_groups/functional_groups/bromo.py -> build/bdist.linux-armv7l/wheel/stk/molecular/functional_groups/functional_groups 2020-04-24T12:12:30,901 creating build/bdist.linux-armv7l/wheel/stk/molecular/functional_groups/factories 2020-04-24T12:12:30,904 copying build/lib/stk/molecular/functional_groups/factories/iodo_factory.py -> build/bdist.linux-armv7l/wheel/stk/molecular/functional_groups/factories 2020-04-24T12:12:30,911 copying build/lib/stk/molecular/functional_groups/factories/amide_factory.py -> build/bdist.linux-armv7l/wheel/stk/molecular/functional_groups/factories 2020-04-24T12:12:30,916 copying build/lib/stk/molecular/functional_groups/factories/carboxylic_acid_factory.py -> build/bdist.linux-armv7l/wheel/stk/molecular/functional_groups/factories 2020-04-24T12:12:30,922 copying build/lib/stk/molecular/functional_groups/factories/dibromo_factory.py -> build/bdist.linux-armv7l/wheel/stk/molecular/functional_groups/factories 2020-04-24T12:12:30,928 copying build/lib/stk/molecular/functional_groups/factories/alcohol_factory.py -> build/bdist.linux-armv7l/wheel/stk/molecular/functional_groups/factories 2020-04-24T12:12:30,934 copying build/lib/stk/molecular/functional_groups/factories/thioacid_factory.py -> build/bdist.linux-armv7l/wheel/stk/molecular/functional_groups/factories 2020-04-24T12:12:30,940 copying build/lib/stk/molecular/functional_groups/factories/boronic_acid_factory.py -> build/bdist.linux-armv7l/wheel/stk/molecular/functional_groups/factories 2020-04-24T12:12:30,946 copying build/lib/stk/molecular/functional_groups/factories/secondary_amino_factory.py -> build/bdist.linux-armv7l/wheel/stk/molecular/functional_groups/factories 2020-04-24T12:12:30,951 copying build/lib/stk/molecular/functional_groups/factories/terminal_alkene_factory.py -> build/bdist.linux-armv7l/wheel/stk/molecular/functional_groups/factories 2020-04-24T12:12:30,958 copying build/lib/stk/molecular/functional_groups/factories/primary_amino_factory.py -> build/bdist.linux-armv7l/wheel/stk/molecular/functional_groups/factories 2020-04-24T12:12:30,964 copying build/lib/stk/molecular/functional_groups/factories/fluoro_factory.py -> build/bdist.linux-armv7l/wheel/stk/molecular/functional_groups/factories 2020-04-24T12:12:30,969 copying build/lib/stk/molecular/functional_groups/factories/aldehyde_factory.py -> build/bdist.linux-armv7l/wheel/stk/molecular/functional_groups/factories 2020-04-24T12:12:30,975 copying build/lib/stk/molecular/functional_groups/factories/functional_group_factory.py -> build/bdist.linux-armv7l/wheel/stk/molecular/functional_groups/factories 2020-04-24T12:12:30,982 copying build/lib/stk/molecular/functional_groups/factories/ring_amine_factory.py -> build/bdist.linux-armv7l/wheel/stk/molecular/functional_groups/factories 2020-04-24T12:12:30,987 copying build/lib/stk/molecular/functional_groups/factories/terminal_alkyne_factory.py -> build/bdist.linux-armv7l/wheel/stk/molecular/functional_groups/factories 2020-04-24T12:12:30,993 copying build/lib/stk/molecular/functional_groups/factories/difluoro_factory.py -> build/bdist.linux-armv7l/wheel/stk/molecular/functional_groups/factories 2020-04-24T12:12:30,999 copying build/lib/stk/molecular/functional_groups/factories/utilities.py -> build/bdist.linux-armv7l/wheel/stk/molecular/functional_groups/factories 2020-04-24T12:12:31,005 copying build/lib/stk/molecular/functional_groups/factories/__init__.py -> build/bdist.linux-armv7l/wheel/stk/molecular/functional_groups/factories 2020-04-24T12:12:31,011 copying build/lib/stk/molecular/functional_groups/factories/diol_factory.py -> build/bdist.linux-armv7l/wheel/stk/molecular/functional_groups/factories 2020-04-24T12:12:31,017 copying build/lib/stk/molecular/functional_groups/factories/bromo_factory.py -> build/bdist.linux-armv7l/wheel/stk/molecular/functional_groups/factories 2020-04-24T12:12:31,023 copying build/lib/stk/molecular/functional_groups/factories/thiol_factory.py -> build/bdist.linux-armv7l/wheel/stk/molecular/functional_groups/factories 2020-04-24T12:12:31,029 copying build/lib/stk/molecular/functional_groups/__init__.py -> build/bdist.linux-armv7l/wheel/stk/molecular/functional_groups 2020-04-24T12:12:31,035 creating build/bdist.linux-armv7l/wheel/stk/molecular/reactions 2020-04-24T12:12:31,038 creating build/bdist.linux-armv7l/wheel/stk/molecular/reactions/factories 2020-04-24T12:12:31,041 copying build/lib/stk/molecular/reactions/factories/reaction_factory.py -> build/bdist.linux-armv7l/wheel/stk/molecular/reactions/factories 2020-04-24T12:12:31,045 copying build/lib/stk/molecular/reactions/factories/__init__.py -> build/bdist.linux-armv7l/wheel/stk/molecular/reactions/factories 2020-04-24T12:12:31,050 copying build/lib/stk/molecular/reactions/factories/generic_reaction_factory.py -> build/bdist.linux-armv7l/wheel/stk/molecular/reactions/factories 2020-04-24T12:12:31,058 creating build/bdist.linux-armv7l/wheel/stk/molecular/reactions/reactions 2020-04-24T12:12:31,061 copying build/lib/stk/molecular/reactions/reactions/ring_amine_reaction.py -> build/bdist.linux-armv7l/wheel/stk/molecular/reactions/reactions 2020-04-24T12:12:31,067 copying build/lib/stk/molecular/reactions/reactions/two_two_reaction.py -> build/bdist.linux-armv7l/wheel/stk/molecular/reactions/reactions 2020-04-24T12:12:31,073 copying build/lib/stk/molecular/reactions/reactions/one_two_reaction.py -> build/bdist.linux-armv7l/wheel/stk/molecular/reactions/reactions 2020-04-24T12:12:31,077 copying build/lib/stk/molecular/reactions/reactions/one_one_reaction.py -> build/bdist.linux-armv7l/wheel/stk/molecular/reactions/reactions 2020-04-24T12:12:31,086 copying build/lib/stk/molecular/reactions/reactions/__init__.py -> build/bdist.linux-armv7l/wheel/stk/molecular/reactions/reactions 2020-04-24T12:12:31,091 creating build/bdist.linux-armv7l/wheel/stk/molecular/reactions/reactions/reaction 2020-04-24T12:12:31,094 copying build/lib/stk/molecular/reactions/reactions/reaction/reaction.py -> build/bdist.linux-armv7l/wheel/stk/molecular/reactions/reactions/reaction 2020-04-24T12:12:31,101 copying build/lib/stk/molecular/reactions/reactions/reaction/new_atom.py -> build/bdist.linux-armv7l/wheel/stk/molecular/reactions/reactions/reaction 2020-04-24T12:12:31,107 copying build/lib/stk/molecular/reactions/reactions/reaction/reaction_result.py -> build/bdist.linux-armv7l/wheel/stk/molecular/reactions/reactions/reaction 2020-04-24T12:12:31,113 copying build/lib/stk/molecular/reactions/reactions/reaction/__init__.py -> build/bdist.linux-armv7l/wheel/stk/molecular/reactions/reactions/reaction 2020-04-24T12:12:31,118 copying build/lib/stk/molecular/reactions/__init__.py -> build/bdist.linux-armv7l/wheel/stk/molecular/reactions 2020-04-24T12:12:31,123 creating build/bdist.linux-armv7l/wheel/stk/molecular/atoms 2020-04-24T12:12:31,125 copying build/lib/stk/molecular/atoms/elements.py -> build/bdist.linux-armv7l/wheel/stk/molecular/atoms 2020-04-24T12:12:31,131 copying build/lib/stk/molecular/atoms/atom_info.py -> build/bdist.linux-armv7l/wheel/stk/molecular/atoms 2020-04-24T12:12:31,136 copying build/lib/stk/molecular/atoms/__init__.py -> build/bdist.linux-armv7l/wheel/stk/molecular/atoms 2020-04-24T12:12:31,142 copying build/lib/stk/molecular/atoms/atom.py -> build/bdist.linux-armv7l/wheel/stk/molecular/atoms 2020-04-24T12:12:31,150 creating build/bdist.linux-armv7l/wheel/stk/molecular/key_makers 2020-04-24T12:12:31,152 copying build/lib/stk/molecular/key_makers/inchi_key.py -> build/bdist.linux-armv7l/wheel/stk/molecular/key_makers 2020-04-24T12:12:31,157 copying build/lib/stk/molecular/key_makers/inchi.py -> build/bdist.linux-armv7l/wheel/stk/molecular/key_makers 2020-04-24T12:12:31,162 copying build/lib/stk/molecular/key_makers/utilities.py -> build/bdist.linux-armv7l/wheel/stk/molecular/key_makers 2020-04-24T12:12:31,166 copying build/lib/stk/molecular/key_makers/__init__.py -> build/bdist.linux-armv7l/wheel/stk/molecular/key_makers 2020-04-24T12:12:31,171 copying build/lib/stk/molecular/key_makers/molecule.py -> build/bdist.linux-armv7l/wheel/stk/molecular/key_makers 2020-04-24T12:12:31,176 copying build/lib/stk/molecular/__init__.py -> build/bdist.linux-armv7l/wheel/stk/molecular 2020-04-24T12:12:31,183 creating build/bdist.linux-armv7l/wheel/stk/molecular/bonds 2020-04-24T12:12:31,186 copying build/lib/stk/molecular/bonds/bond_info.py -> build/bdist.linux-armv7l/wheel/stk/molecular/bonds 2020-04-24T12:12:31,192 copying build/lib/stk/molecular/bonds/bond.py -> build/bdist.linux-armv7l/wheel/stk/molecular/bonds 2020-04-24T12:12:31,199 copying build/lib/stk/molecular/bonds/__init__.py -> build/bdist.linux-armv7l/wheel/stk/molecular/bonds 2020-04-24T12:12:31,206 creating build/bdist.linux-armv7l/wheel/stk/serialization 2020-04-24T12:12:31,210 creating build/bdist.linux-armv7l/wheel/stk/serialization/json 2020-04-24T12:12:31,215 creating build/bdist.linux-armv7l/wheel/stk/serialization/json/deserializers 2020-04-24T12:12:31,218 copying build/lib/stk/serialization/json/deserializers/constructed_molecule.py -> build/bdist.linux-armv7l/wheel/stk/serialization/json/deserializers 2020-04-24T12:12:31,224 copying build/lib/stk/serialization/json/deserializers/utilities.py -> build/bdist.linux-armv7l/wheel/stk/serialization/json/deserializers 2020-04-24T12:12:31,230 copying build/lib/stk/serialization/json/deserializers/__init__.py -> build/bdist.linux-armv7l/wheel/stk/serialization/json/deserializers 2020-04-24T12:12:31,235 copying build/lib/stk/serialization/json/deserializers/molecule.py -> build/bdist.linux-armv7l/wheel/stk/serialization/json/deserializers 2020-04-24T12:12:31,243 creating build/bdist.linux-armv7l/wheel/stk/serialization/json/serializers 2020-04-24T12:12:31,247 creating build/bdist.linux-armv7l/wheel/stk/serialization/json/serializers/molecule 2020-04-24T12:12:31,250 copying build/lib/stk/serialization/json/serializers/molecule/utilities.py -> build/bdist.linux-armv7l/wheel/stk/serialization/json/serializers/molecule 2020-04-24T12:12:31,256 copying build/lib/stk/serialization/json/serializers/molecule/__init__.py -> build/bdist.linux-armv7l/wheel/stk/serialization/json/serializers/molecule 2020-04-24T12:12:31,262 copying build/lib/stk/serialization/json/serializers/molecule/molecule.py -> build/bdist.linux-armv7l/wheel/stk/serialization/json/serializers/molecule 2020-04-24T12:12:31,269 creating build/bdist.linux-armv7l/wheel/stk/serialization/json/serializers/constructed_molecule 2020-04-24T12:12:31,272 copying build/lib/stk/serialization/json/serializers/constructed_molecule/constructed_molecule.py -> build/bdist.linux-armv7l/wheel/stk/serialization/json/serializers/constructed_molecule 2020-04-24T12:12:31,279 copying build/lib/stk/serialization/json/serializers/constructed_molecule/__init__.py -> build/bdist.linux-armv7l/wheel/stk/serialization/json/serializers/constructed_molecule 2020-04-24T12:12:31,286 copying build/lib/stk/serialization/json/serializers/__init__.py -> build/bdist.linux-armv7l/wheel/stk/serialization/json/serializers 2020-04-24T12:12:31,292 copying build/lib/stk/serialization/json/__init__.py -> build/bdist.linux-armv7l/wheel/stk/serialization/json 2020-04-24T12:12:31,298 copying build/lib/stk/serialization/__init__.py -> build/bdist.linux-armv7l/wheel/stk/serialization 2020-04-24T12:12:31,305 creating build/bdist.linux-armv7l/wheel/stk/ea 2020-04-24T12:12:31,308 creating build/bdist.linux-armv7l/wheel/stk/ea/plotters 2020-04-24T12:12:31,311 copying build/lib/stk/ea/plotters/progress.py -> build/bdist.linux-armv7l/wheel/stk/ea/plotters 2020-04-24T12:12:31,318 copying build/lib/stk/ea/plotters/selection.py -> build/bdist.linux-armv7l/wheel/stk/ea/plotters 2020-04-24T12:12:31,325 copying build/lib/stk/ea/plotters/__init__.py -> build/bdist.linux-armv7l/wheel/stk/ea/plotters 2020-04-24T12:12:31,333 creating build/bdist.linux-armv7l/wheel/stk/ea/crossover 2020-04-24T12:12:31,339 creating build/bdist.linux-armv7l/wheel/stk/ea/crossover/crossers 2020-04-24T12:12:31,344 creating build/bdist.linux-armv7l/wheel/stk/ea/crossover/crossers/molecule 2020-04-24T12:12:31,347 copying build/lib/stk/ea/crossover/crossers/molecule/crosser.py -> build/bdist.linux-armv7l/wheel/stk/ea/crossover/crossers/molecule 2020-04-24T12:12:31,352 copying build/lib/stk/ea/crossover/crossers/molecule/__init__.py -> build/bdist.linux-armv7l/wheel/stk/ea/crossover/crossers/molecule 2020-04-24T12:12:31,357 copying build/lib/stk/ea/crossover/crossers/molecule/genetic_recombination.py -> build/bdist.linux-armv7l/wheel/stk/ea/crossover/crossers/molecule 2020-04-24T12:12:31,366 creating build/bdist.linux-armv7l/wheel/stk/ea/crossover/crossers/compound 2020-04-24T12:12:31,370 copying build/lib/stk/ea/crossover/crossers/compound/random.py -> build/bdist.linux-armv7l/wheel/stk/ea/crossover/crossers/compound 2020-04-24T12:12:31,377 copying build/lib/stk/ea/crossover/crossers/compound/__init__.py -> build/bdist.linux-armv7l/wheel/stk/ea/crossover/crossers/compound 2020-04-24T12:12:31,383 copying build/lib/stk/ea/crossover/crossers/__init__.py -> build/bdist.linux-armv7l/wheel/stk/ea/crossover/crossers 2020-04-24T12:12:31,389 creating build/bdist.linux-armv7l/wheel/stk/ea/crossover/records 2020-04-24T12:12:31,392 copying build/lib/stk/ea/crossover/records/record.py -> build/bdist.linux-armv7l/wheel/stk/ea/crossover/records 2020-04-24T12:12:31,397 copying build/lib/stk/ea/crossover/records/__init__.py -> build/bdist.linux-armv7l/wheel/stk/ea/crossover/records 2020-04-24T12:12:31,403 copying build/lib/stk/ea/crossover/__init__.py -> build/bdist.linux-armv7l/wheel/stk/ea/crossover 2020-04-24T12:12:31,409 copying build/lib/stk/ea/generation.py -> build/bdist.linux-armv7l/wheel/stk/ea 2020-04-24T12:12:31,418 creating build/bdist.linux-armv7l/wheel/stk/ea/fitness_normalizers 2020-04-24T12:12:31,422 copying build/lib/stk/ea/fitness_normalizers/add.py -> build/bdist.linux-armv7l/wheel/stk/ea/fitness_normalizers 2020-04-24T12:12:31,428 copying build/lib/stk/ea/fitness_normalizers/null.py -> build/bdist.linux-armv7l/wheel/stk/ea/fitness_normalizers 2020-04-24T12:12:31,432 copying build/lib/stk/ea/fitness_normalizers/fitness_normalizer.py -> build/bdist.linux-armv7l/wheel/stk/ea/fitness_normalizers 2020-04-24T12:12:31,437 copying build/lib/stk/ea/fitness_normalizers/multiply.py -> build/bdist.linux-armv7l/wheel/stk/ea/fitness_normalizers 2020-04-24T12:12:31,444 copying build/lib/stk/ea/fitness_normalizers/replace_fitness.py -> build/bdist.linux-armv7l/wheel/stk/ea/fitness_normalizers 2020-04-24T12:12:31,451 copying build/lib/stk/ea/fitness_normalizers/sequence.py -> build/bdist.linux-armv7l/wheel/stk/ea/fitness_normalizers 2020-04-24T12:12:31,457 copying build/lib/stk/ea/fitness_normalizers/divide_by_mean.py -> build/bdist.linux-armv7l/wheel/stk/ea/fitness_normalizers 2020-04-24T12:12:31,464 copying build/lib/stk/ea/fitness_normalizers/sum.py -> build/bdist.linux-armv7l/wheel/stk/ea/fitness_normalizers 2020-04-24T12:12:31,469 copying build/lib/stk/ea/fitness_normalizers/shift_up.py -> build/bdist.linux-armv7l/wheel/stk/ea/fitness_normalizers 2020-04-24T12:12:31,475 copying build/lib/stk/ea/fitness_normalizers/power.py -> build/bdist.linux-armv7l/wheel/stk/ea/fitness_normalizers 2020-04-24T12:12:31,481 copying build/lib/stk/ea/fitness_normalizers/__init__.py -> build/bdist.linux-armv7l/wheel/stk/ea/fitness_normalizers 2020-04-24T12:12:31,489 creating build/bdist.linux-armv7l/wheel/stk/ea/mutation 2020-04-24T12:12:31,494 creating build/bdist.linux-armv7l/wheel/stk/ea/mutation/records 2020-04-24T12:12:31,499 copying build/lib/stk/ea/mutation/records/record.py -> build/bdist.linux-armv7l/wheel/stk/ea/mutation/records 2020-04-24T12:12:31,505 copying build/lib/stk/ea/mutation/records/__init__.py -> build/bdist.linux-armv7l/wheel/stk/ea/mutation/records 2020-04-24T12:12:31,510 copying build/lib/stk/ea/mutation/__init__.py -> build/bdist.linux-armv7l/wheel/stk/ea/mutation 2020-04-24T12:12:31,516 creating build/bdist.linux-armv7l/wheel/stk/ea/mutation/mutators 2020-04-24T12:12:31,520 creating build/bdist.linux-armv7l/wheel/stk/ea/mutation/mutators/molecule 2020-04-24T12:12:31,523 copying build/lib/stk/ea/mutation/mutators/molecule/random_building_block.py -> build/bdist.linux-armv7l/wheel/stk/ea/mutation/mutators/molecule 2020-04-24T12:12:31,531 copying build/lib/stk/ea/mutation/mutators/molecule/mutator.py -> build/bdist.linux-armv7l/wheel/stk/ea/mutation/mutators/molecule 2020-04-24T12:12:31,538 copying build/lib/stk/ea/mutation/mutators/molecule/random_topology_graph.py -> build/bdist.linux-armv7l/wheel/stk/ea/mutation/mutators/molecule 2020-04-24T12:12:31,545 copying build/lib/stk/ea/mutation/mutators/molecule/__init__.py -> build/bdist.linux-armv7l/wheel/stk/ea/mutation/mutators/molecule 2020-04-24T12:12:31,550 copying build/lib/stk/ea/mutation/mutators/molecule/similar_building_block.py -> build/bdist.linux-armv7l/wheel/stk/ea/mutation/mutators/molecule 2020-04-24T12:12:31,557 creating build/bdist.linux-armv7l/wheel/stk/ea/mutation/mutators/compound 2020-04-24T12:12:31,560 copying build/lib/stk/ea/mutation/mutators/compound/random.py -> build/bdist.linux-armv7l/wheel/stk/ea/mutation/mutators/compound 2020-04-24T12:12:31,565 copying build/lib/stk/ea/mutation/mutators/compound/__init__.py -> build/bdist.linux-armv7l/wheel/stk/ea/mutation/mutators/compound 2020-04-24T12:12:31,572 copying build/lib/stk/ea/mutation/mutators/__init__.py -> build/bdist.linux-armv7l/wheel/stk/ea/mutation/mutators 2020-04-24T12:12:31,581 creating build/bdist.linux-armv7l/wheel/stk/ea/evolutionary_algorithm 2020-04-24T12:12:31,584 copying build/lib/stk/ea/evolutionary_algorithm/evolutionary_algorithm.py -> build/bdist.linux-armv7l/wheel/stk/ea/evolutionary_algorithm 2020-04-24T12:12:31,592 creating build/bdist.linux-armv7l/wheel/stk/ea/evolutionary_algorithm/implementations 2020-04-24T12:12:31,595 copying build/lib/stk/ea/evolutionary_algorithm/implementations/parallel.py -> build/bdist.linux-armv7l/wheel/stk/ea/evolutionary_algorithm/implementations 2020-04-24T12:12:31,601 copying build/lib/stk/ea/evolutionary_algorithm/implementations/serial.py -> build/bdist.linux-armv7l/wheel/stk/ea/evolutionary_algorithm/implementations 2020-04-24T12:12:31,606 copying build/lib/stk/ea/evolutionary_algorithm/implementations/implementation.py -> build/bdist.linux-armv7l/wheel/stk/ea/evolutionary_algorithm/implementations 2020-04-24T12:12:31,612 copying build/lib/stk/ea/evolutionary_algorithm/implementations/__init__.py -> build/bdist.linux-armv7l/wheel/stk/ea/evolutionary_algorithm/implementations 2020-04-24T12:12:31,619 copying build/lib/stk/ea/evolutionary_algorithm/__init__.py -> build/bdist.linux-armv7l/wheel/stk/ea/evolutionary_algorithm 2020-04-24T12:12:31,627 creating build/bdist.linux-armv7l/wheel/stk/ea/selection 2020-04-24T12:12:31,632 creating build/bdist.linux-armv7l/wheel/stk/ea/selection/selectors 2020-04-24T12:12:31,635 copying build/lib/stk/ea/selection/selectors/filter_batches.py -> build/bdist.linux-armv7l/wheel/stk/ea/selection/selectors 2020-04-24T12:12:31,640 copying build/lib/stk/ea/selection/selectors/best.py -> build/bdist.linux-armv7l/wheel/stk/ea/selection/selectors 2020-04-24T12:12:31,646 copying build/lib/stk/ea/selection/selectors/filter_molecules.py -> build/bdist.linux-armv7l/wheel/stk/ea/selection/selectors 2020-04-24T12:12:31,651 copying build/lib/stk/ea/selection/selectors/tournament.py -> build/bdist.linux-armv7l/wheel/stk/ea/selection/selectors 2020-04-24T12:12:31,656 copying build/lib/stk/ea/selection/selectors/stochastic_universal_sampling.py -> build/bdist.linux-armv7l/wheel/stk/ea/selection/selectors 2020-04-24T12:12:31,661 copying build/lib/stk/ea/selection/selectors/remove_molecules.py -> build/bdist.linux-armv7l/wheel/stk/ea/selection/selectors 2020-04-24T12:12:31,666 copying build/lib/stk/ea/selection/selectors/remove_batches.py -> build/bdist.linux-armv7l/wheel/stk/ea/selection/selectors 2020-04-24T12:12:31,671 copying build/lib/stk/ea/selection/selectors/above_average.py -> build/bdist.linux-armv7l/wheel/stk/ea/selection/selectors 2020-04-24T12:12:31,679 creating build/bdist.linux-armv7l/wheel/stk/ea/selection/selectors/utilities 2020-04-24T12:12:31,682 copying build/lib/stk/ea/selection/selectors/utilities/__init__.py -> build/bdist.linux-armv7l/wheel/stk/ea/selection/selectors/utilities 2020-04-24T12:12:31,688 copying build/lib/stk/ea/selection/selectors/utilities/yielded_batches.py -> build/bdist.linux-armv7l/wheel/stk/ea/selection/selectors/utilities 2020-04-24T12:12:31,693 copying build/lib/stk/ea/selection/selectors/selector.py -> build/bdist.linux-armv7l/wheel/stk/ea/selection/selectors 2020-04-24T12:12:31,698 copying build/lib/stk/ea/selection/selectors/worst.py -> build/bdist.linux-armv7l/wheel/stk/ea/selection/selectors 2020-04-24T12:12:31,703 copying build/lib/stk/ea/selection/selectors/roulette.py -> build/bdist.linux-armv7l/wheel/stk/ea/selection/selectors 2020-04-24T12:12:31,708 copying build/lib/stk/ea/selection/selectors/__init__.py -> build/bdist.linux-armv7l/wheel/stk/ea/selection/selectors 2020-04-24T12:12:31,714 copying build/lib/stk/ea/selection/__init__.py -> build/bdist.linux-armv7l/wheel/stk/ea/selection 2020-04-24T12:12:31,719 copying build/lib/stk/ea/selection/batch.py -> build/bdist.linux-armv7l/wheel/stk/ea/selection 2020-04-24T12:12:31,727 creating build/bdist.linux-armv7l/wheel/stk/ea/molecule_records 2020-04-24T12:12:31,729 copying build/lib/stk/ea/molecule_records/__init__.py -> build/bdist.linux-armv7l/wheel/stk/ea/molecule_records 2020-04-24T12:12:31,734 copying build/lib/stk/ea/molecule_records/molecule.py -> build/bdist.linux-armv7l/wheel/stk/ea/molecule_records 2020-04-24T12:12:31,739 copying build/lib/stk/ea/__init__.py -> build/bdist.linux-armv7l/wheel/stk/ea 2020-04-24T12:12:31,744 creating build/bdist.linux-armv7l/wheel/stk/ea/fitness_calculators 2020-04-24T12:12:31,746 copying build/lib/stk/ea/fitness_calculators/property_vector.py -> build/bdist.linux-armv7l/wheel/stk/ea/fitness_calculators 2020-04-24T12:12:31,753 copying build/lib/stk/ea/fitness_calculators/fitness_function.py -> build/bdist.linux-armv7l/wheel/stk/ea/fitness_calculators 2020-04-24T12:12:31,759 copying build/lib/stk/ea/fitness_calculators/__init__.py -> build/bdist.linux-armv7l/wheel/stk/ea/fitness_calculators 2020-04-24T12:12:31,765 copying build/lib/stk/ea/fitness_calculators/fitness_calculator.py -> build/bdist.linux-armv7l/wheel/stk/ea/fitness_calculators 2020-04-24T12:12:31,770 running install_egg_info 2020-04-24T12:12:31,814 running egg_info 2020-04-24T12:12:31,815 writing src/stk.egg-info/PKG-INFO 2020-04-24T12:12:31,820 writing dependency_links to src/stk.egg-info/dependency_links.txt 2020-04-24T12:12:31,825 writing requirements to src/stk.egg-info/requires.txt 2020-04-24T12:12:31,828 writing top-level names to src/stk.egg-info/top_level.txt 2020-04-24T12:12:31,926 reading manifest file 'src/stk.egg-info/SOURCES.txt' 2020-04-24T12:12:31,973 writing manifest file 'src/stk.egg-info/SOURCES.txt' 2020-04-24T12:12:31,978 Copying src/stk.egg-info to build/bdist.linux-armv7l/wheel/stk-2020.4.24.0-py3.7.egg-info 2020-04-24T12:12:32,004 running install_scripts 2020-04-24T12:12:32,162 creating build/bdist.linux-armv7l/wheel/stk-2020.4.24.0.dist-info/WHEEL 2020-04-24T12:12:32,169 creating '/tmp/pip-wheel-5zy1mygs/stk-2020.4.24.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2020-04-24T12:12:32,177 adding 'stk/__init__.py' 2020-04-24T12:12:32,181 adding 'stk/databases/__init__.py' 2020-04-24T12:12:32,183 adding 'stk/databases/constructed_molecule.py' 2020-04-24T12:12:32,186 adding 'stk/databases/molecule.py' 2020-04-24T12:12:32,188 adding 'stk/databases/value.py' 2020-04-24T12:12:32,194 adding 'stk/databases/mongo_db/__init__.py' 2020-04-24T12:12:32,200 adding 'stk/databases/mongo_db/constructed_molecule.py' 2020-04-24T12:12:32,206 adding 'stk/databases/mongo_db/molecule.py' 2020-04-24T12:12:32,210 adding 'stk/databases/mongo_db/utilities.py' 2020-04-24T12:12:32,213 adding 'stk/databases/mongo_db/value.py' 2020-04-24T12:12:32,217 adding 'stk/ea/__init__.py' 2020-04-24T12:12:32,220 adding 'stk/ea/generation.py' 2020-04-24T12:12:32,223 adding 'stk/ea/crossover/__init__.py' 2020-04-24T12:12:32,227 adding 'stk/ea/crossover/crossers/__init__.py' 2020-04-24T12:12:32,230 adding 'stk/ea/crossover/crossers/compound/__init__.py' 2020-04-24T12:12:32,233 adding 'stk/ea/crossover/crossers/compound/random.py' 2020-04-24T12:12:32,237 adding 'stk/ea/crossover/crossers/molecule/__init__.py' 2020-04-24T12:12:32,239 adding 'stk/ea/crossover/crossers/molecule/crosser.py' 2020-04-24T12:12:32,242 adding 'stk/ea/crossover/crossers/molecule/genetic_recombination.py' 2020-04-24T12:12:32,246 adding 'stk/ea/crossover/records/__init__.py' 2020-04-24T12:12:32,248 adding 'stk/ea/crossover/records/record.py' 2020-04-24T12:12:32,252 adding 'stk/ea/evolutionary_algorithm/__init__.py' 2020-04-24T12:12:32,255 adding 'stk/ea/evolutionary_algorithm/evolutionary_algorithm.py' 2020-04-24T12:12:32,259 adding 'stk/ea/evolutionary_algorithm/implementations/__init__.py' 2020-04-24T12:12:32,261 adding 'stk/ea/evolutionary_algorithm/implementations/implementation.py' 2020-04-24T12:12:32,264 adding 'stk/ea/evolutionary_algorithm/implementations/parallel.py' 2020-04-24T12:12:32,266 adding 'stk/ea/evolutionary_algorithm/implementations/serial.py' 2020-04-24T12:12:32,270 adding 'stk/ea/fitness_calculators/__init__.py' 2020-04-24T12:12:32,272 adding 'stk/ea/fitness_calculators/fitness_calculator.py' 2020-04-24T12:12:32,275 adding 'stk/ea/fitness_calculators/fitness_function.py' 2020-04-24T12:12:32,278 adding 'stk/ea/fitness_calculators/property_vector.py' 2020-04-24T12:12:32,282 adding 'stk/ea/fitness_normalizers/__init__.py' 2020-04-24T12:12:32,285 adding 'stk/ea/fitness_normalizers/add.py' 2020-04-24T12:12:32,288 adding 'stk/ea/fitness_normalizers/divide_by_mean.py' 2020-04-24T12:12:32,291 adding 'stk/ea/fitness_normalizers/fitness_normalizer.py' 2020-04-24T12:12:32,294 adding 'stk/ea/fitness_normalizers/multiply.py' 2020-04-24T12:12:32,296 adding 'stk/ea/fitness_normalizers/null.py' 2020-04-24T12:12:32,299 adding 'stk/ea/fitness_normalizers/power.py' 2020-04-24T12:12:32,302 adding 'stk/ea/fitness_normalizers/replace_fitness.py' 2020-04-24T12:12:32,304 adding 'stk/ea/fitness_normalizers/sequence.py' 2020-04-24T12:12:32,307 adding 'stk/ea/fitness_normalizers/shift_up.py' 2020-04-24T12:12:32,310 adding 'stk/ea/fitness_normalizers/sum.py' 2020-04-24T12:12:32,313 adding 'stk/ea/molecule_records/__init__.py' 2020-04-24T12:12:32,316 adding 'stk/ea/molecule_records/molecule.py' 2020-04-24T12:12:32,320 adding 'stk/ea/mutation/__init__.py' 2020-04-24T12:12:32,323 adding 'stk/ea/mutation/mutators/__init__.py' 2020-04-24T12:12:32,327 adding 'stk/ea/mutation/mutators/compound/__init__.py' 2020-04-24T12:12:32,329 adding 'stk/ea/mutation/mutators/compound/random.py' 2020-04-24T12:12:32,333 adding 'stk/ea/mutation/mutators/molecule/__init__.py' 2020-04-24T12:12:32,335 adding 'stk/ea/mutation/mutators/molecule/mutator.py' 2020-04-24T12:12:32,338 adding 'stk/ea/mutation/mutators/molecule/random_building_block.py' 2020-04-24T12:12:32,341 adding 'stk/ea/mutation/mutators/molecule/random_topology_graph.py' 2020-04-24T12:12:32,344 adding 'stk/ea/mutation/mutators/molecule/similar_building_block.py' 2020-04-24T12:12:32,348 adding 'stk/ea/mutation/records/__init__.py' 2020-04-24T12:12:32,350 adding 'stk/ea/mutation/records/record.py' 2020-04-24T12:12:32,354 adding 'stk/ea/plotters/__init__.py' 2020-04-24T12:12:32,357 adding 'stk/ea/plotters/progress.py' 2020-04-24T12:12:32,360 adding 'stk/ea/plotters/selection.py' 2020-04-24T12:12:32,364 adding 'stk/ea/selection/__init__.py' 2020-04-24T12:12:32,367 adding 'stk/ea/selection/batch.py' 2020-04-24T12:12:32,371 adding 'stk/ea/selection/selectors/__init__.py' 2020-04-24T12:12:32,373 adding 'stk/ea/selection/selectors/above_average.py' 2020-04-24T12:12:32,376 adding 'stk/ea/selection/selectors/best.py' 2020-04-24T12:12:32,379 adding 'stk/ea/selection/selectors/filter_batches.py' 2020-04-24T12:12:32,381 adding 'stk/ea/selection/selectors/filter_molecules.py' 2020-04-24T12:12:32,384 adding 'stk/ea/selection/selectors/remove_batches.py' 2020-04-24T12:12:32,387 adding 'stk/ea/selection/selectors/remove_molecules.py' 2020-04-24T12:12:32,394 adding 'stk/ea/selection/selectors/roulette.py' 2020-04-24T12:12:32,397 adding 'stk/ea/selection/selectors/selector.py' 2020-04-24T12:12:32,400 adding 'stk/ea/selection/selectors/stochastic_universal_sampling.py' 2020-04-24T12:12:32,404 adding 'stk/ea/selection/selectors/tournament.py' 2020-04-24T12:12:32,406 adding 'stk/ea/selection/selectors/worst.py' 2020-04-24T12:12:32,410 adding 'stk/ea/selection/selectors/utilities/__init__.py' 2020-04-24T12:12:32,413 adding 'stk/ea/selection/selectors/utilities/yielded_batches.py' 2020-04-24T12:12:32,416 adding 'stk/molecular/__init__.py' 2020-04-24T12:12:32,420 adding 'stk/molecular/atoms/__init__.py' 2020-04-24T12:12:32,423 adding 'stk/molecular/atoms/atom.py' 2020-04-24T12:12:32,425 adding 'stk/molecular/atoms/atom_info.py' 2020-04-24T12:12:32,428 adding 'stk/molecular/atoms/elements.py' 2020-04-24T12:12:32,432 adding 'stk/molecular/bonds/__init__.py' 2020-04-24T12:12:32,435 adding 'stk/molecular/bonds/bond.py' 2020-04-24T12:12:32,437 adding 'stk/molecular/bonds/bond_info.py' 2020-04-24T12:12:32,441 adding 'stk/molecular/functional_groups/__init__.py' 2020-04-24T12:12:32,445 adding 'stk/molecular/functional_groups/factories/__init__.py' 2020-04-24T12:12:32,448 adding 'stk/molecular/functional_groups/factories/alcohol_factory.py' 2020-04-24T12:12:32,450 adding 'stk/molecular/functional_groups/factories/aldehyde_factory.py' 2020-04-24T12:12:32,453 adding 'stk/molecular/functional_groups/factories/amide_factory.py' 2020-04-24T12:12:32,456 adding 'stk/molecular/functional_groups/factories/boronic_acid_factory.py' 2020-04-24T12:12:32,459 adding 'stk/molecular/functional_groups/factories/bromo_factory.py' 2020-04-24T12:12:32,461 adding 'stk/molecular/functional_groups/factories/carboxylic_acid_factory.py' 2020-04-24T12:12:32,464 adding 'stk/molecular/functional_groups/factories/dibromo_factory.py' 2020-04-24T12:12:32,467 adding 'stk/molecular/functional_groups/factories/difluoro_factory.py' 2020-04-24T12:12:32,469 adding 'stk/molecular/functional_groups/factories/diol_factory.py' 2020-04-24T12:12:32,472 adding 'stk/molecular/functional_groups/factories/fluoro_factory.py' 2020-04-24T12:12:32,475 adding 'stk/molecular/functional_groups/factories/functional_group_factory.py' 2020-04-24T12:12:32,494 adding 'stk/molecular/functional_groups/factories/iodo_factory.py' 2020-04-24T12:12:32,497 adding 'stk/molecular/functional_groups/factories/primary_amino_factory.py' 2020-04-24T12:12:32,500 adding 'stk/molecular/functional_groups/factories/ring_amine_factory.py' 2020-04-24T12:12:32,504 adding 'stk/molecular/functional_groups/factories/secondary_amino_factory.py' 2020-04-24T12:12:32,508 adding 'stk/molecular/functional_groups/factories/terminal_alkene_factory.py' 2020-04-24T12:12:32,513 adding 'stk/molecular/functional_groups/factories/terminal_alkyne_factory.py' 2020-04-24T12:12:32,517 adding 'stk/molecular/functional_groups/factories/thioacid_factory.py' 2020-04-24T12:12:32,520 adding 'stk/molecular/functional_groups/factories/thiol_factory.py' 2020-04-24T12:12:32,523 adding 'stk/molecular/functional_groups/factories/utilities.py' 2020-04-24T12:12:32,527 adding 'stk/molecular/functional_groups/functional_groups/__init__.py' 2020-04-24T12:12:32,529 adding 'stk/molecular/functional_groups/functional_groups/alcohol.py' 2020-04-24T12:12:32,532 adding 'stk/molecular/functional_groups/functional_groups/aldehyde.py' 2020-04-24T12:12:32,535 adding 'stk/molecular/functional_groups/functional_groups/alkene.py' 2020-04-24T12:12:32,537 adding 'stk/molecular/functional_groups/functional_groups/alkyne.py' 2020-04-24T12:12:32,540 adding 'stk/molecular/functional_groups/functional_groups/amide.py' 2020-04-24T12:12:32,543 adding 'stk/molecular/functional_groups/functional_groups/boronic_acid.py' 2020-04-24T12:12:32,545 adding 'stk/molecular/functional_groups/functional_groups/bromo.py' 2020-04-24T12:12:32,548 adding 'stk/molecular/functional_groups/functional_groups/carboxylic_acid.py' 2020-04-24T12:12:32,551 adding 'stk/molecular/functional_groups/functional_groups/dibromo.py' 2020-04-24T12:12:32,553 adding 'stk/molecular/functional_groups/functional_groups/difluoro.py' 2020-04-24T12:12:32,556 adding 'stk/molecular/functional_groups/functional_groups/diol.py' 2020-04-24T12:12:32,559 adding 'stk/molecular/functional_groups/functional_groups/fluoro.py' 2020-04-24T12:12:32,562 adding 'stk/molecular/functional_groups/functional_groups/functional_group.py' 2020-04-24T12:12:32,565 adding 'stk/molecular/functional_groups/functional_groups/generic_functional_group.py' 2020-04-24T12:12:32,571 adding 'stk/molecular/functional_groups/functional_groups/iodo.py' 2020-04-24T12:12:32,573 adding 'stk/molecular/functional_groups/functional_groups/primary_amino.py' 2020-04-24T12:12:32,576 adding 'stk/molecular/functional_groups/functional_groups/ring_amine.py' 2020-04-24T12:12:32,579 adding 'stk/molecular/functional_groups/functional_groups/secondary_amino.py' 2020-04-24T12:12:32,581 adding 'stk/molecular/functional_groups/functional_groups/thioacid.py' 2020-04-24T12:12:32,584 adding 'stk/molecular/functional_groups/functional_groups/thiol.py' 2020-04-24T12:12:32,588 adding 'stk/molecular/key_makers/__init__.py' 2020-04-24T12:12:32,590 adding 'stk/molecular/key_makers/inchi.py' 2020-04-24T12:12:32,593 adding 'stk/molecular/key_makers/inchi_key.py' 2020-04-24T12:12:32,595 adding 'stk/molecular/key_makers/molecule.py' 2020-04-24T12:12:32,598 adding 'stk/molecular/key_makers/utilities.py' 2020-04-24T12:12:32,601 adding 'stk/molecular/molecules/__init__.py' 2020-04-24T12:12:32,606 adding 'stk/molecular/molecules/building_block.py' 2020-04-24T12:12:32,610 adding 'stk/molecular/molecules/constructed_molecule.py' 2020-04-24T12:12:32,613 adding 'stk/molecular/molecules/molecule/__init__.py' 2020-04-24T12:12:32,619 adding 'stk/molecular/molecules/molecule/molecule.py' 2020-04-24T12:12:32,622 adding 'stk/molecular/molecules/molecule/utilities/__init__.py' 2020-04-24T12:12:32,626 adding 'stk/molecular/molecules/molecule/utilities/updaters/__init__.py' 2020-04-24T12:12:32,629 adding 'stk/molecular/molecules/molecule/utilities/updaters/mae.py' 2020-04-24T12:12:32,631 adding 'stk/molecular/molecules/molecule/utilities/updaters/mdl_mol.py' 2020-04-24T12:12:32,633 adding 'stk/molecular/molecules/molecule/utilities/updaters/turbomole.py' 2020-04-24T12:12:32,636 adding 'stk/molecular/molecules/molecule/utilities/updaters/xyz.py' 2020-04-24T12:12:32,640 adding 'stk/molecular/molecules/molecule/utilities/writers/__init__.py' 2020-04-24T12:12:32,642 adding 'stk/molecular/molecules/molecule/utilities/writers/mdl_mol.py' 2020-04-24T12:12:32,645 adding 'stk/molecular/molecules/molecule/utilities/writers/pdb.py' 2020-04-24T12:12:32,648 adding 'stk/molecular/molecules/molecule/utilities/writers/xyz.py' 2020-04-24T12:12:32,651 adding 'stk/molecular/reactions/__init__.py' 2020-04-24T12:12:32,655 adding 'stk/molecular/reactions/factories/__init__.py' 2020-04-24T12:12:32,658 adding 'stk/molecular/reactions/factories/generic_reaction_factory.py' 2020-04-24T12:12:32,660 adding 'stk/molecular/reactions/factories/reaction_factory.py' 2020-04-24T12:12:32,664 adding 'stk/molecular/reactions/reactions/__init__.py' 2020-04-24T12:12:32,666 adding 'stk/molecular/reactions/reactions/one_one_reaction.py' 2020-04-24T12:12:32,669 adding 'stk/molecular/reactions/reactions/one_two_reaction.py' 2020-04-24T12:12:32,672 adding 'stk/molecular/reactions/reactions/ring_amine_reaction.py' 2020-04-24T12:12:32,674 adding 'stk/molecular/reactions/reactions/two_two_reaction.py' 2020-04-24T12:12:32,678 adding 'stk/molecular/reactions/reactions/reaction/__init__.py' 2020-04-24T12:12:32,681 adding 'stk/molecular/reactions/reactions/reaction/new_atom.py' 2020-04-24T12:12:32,683 adding 'stk/molecular/reactions/reactions/reaction/reaction.py' 2020-04-24T12:12:32,686 adding 'stk/molecular/reactions/reactions/reaction/reaction_result.py' 2020-04-24T12:12:32,690 adding 'stk/molecular/topology_graphs/__init__.py' 2020-04-24T12:12:32,694 adding 'stk/molecular/topology_graphs/cage/__init__.py' 2020-04-24T12:12:32,697 adding 'stk/molecular/topology_graphs/cage/cage.py' 2020-04-24T12:12:32,701 adding 'stk/molecular/topology_graphs/cage/cage_construction_state.py' 2020-04-24T12:12:32,704 adding 'stk/molecular/topology_graphs/cage/vertices.py' 2020-04-24T12:12:32,708 adding 'stk/molecular/topology_graphs/cage/three_plus_four/__init__.py' 2020-04-24T12:12:32,710 adding 'stk/molecular/topology_graphs/cage/three_plus_four/six_plus_eight.py' 2020-04-24T12:12:32,714 adding 'stk/molecular/topology_graphs/cage/three_plus_three/__init__.py' 2020-04-24T12:12:32,716 adding 'stk/molecular/topology_graphs/cage/three_plus_three/four_plus_four.py' 2020-04-24T12:12:32,719 adding 'stk/molecular/topology_graphs/cage/three_plus_three/one_plus_one.py' 2020-04-24T12:12:32,722 adding 'stk/molecular/topology_graphs/cage/three_plus_three/two_plus_two.py' 2020-04-24T12:12:32,725 adding 'stk/molecular/topology_graphs/cage/two_plus_five/__init__.py' 2020-04-24T12:12:32,728 adding 'stk/molecular/topology_graphs/cage/two_plus_five/twelve_plus_thirty.py' 2020-04-24T12:12:32,732 adding 'stk/molecular/topology_graphs/cage/two_plus_four/__init__.py' 2020-04-24T12:12:32,735 adding 'stk/molecular/topology_graphs/cage/two_plus_four/eight_plus_sixteen.py' 2020-04-24T12:12:32,737 adding 'stk/molecular/topology_graphs/cage/two_plus_four/five_plus_ten.py' 2020-04-24T12:12:32,740 adding 'stk/molecular/topology_graphs/cage/two_plus_four/four_plus_eight.py' 2020-04-24T12:12:32,743 adding 'stk/molecular/topology_graphs/cage/two_plus_four/six_plus_twelve.py' 2020-04-24T12:12:32,746 adding 'stk/molecular/topology_graphs/cage/two_plus_four/ten_plus_twenty.py' 2020-04-24T12:12:32,748 adding 'stk/molecular/topology_graphs/cage/two_plus_four/three_plus_six.py' 2020-04-24T12:12:32,751 adding 'stk/molecular/topology_graphs/cage/two_plus_four/two_plus_four.py' 2020-04-24T12:12:32,754 adding 'stk/molecular/topology_graphs/cage/two_plus_three/__init__.py' 2020-04-24T12:12:32,757 adding 'stk/molecular/topology_graphs/cage/two_plus_three/eight_plus_twelve.py' 2020-04-24T12:12:32,760 adding 'stk/molecular/topology_graphs/cage/two_plus_three/four_plus_six.py' 2020-04-24T12:12:32,762 adding 'stk/molecular/topology_graphs/cage/two_plus_three/four_plus_six_2.py' 2020-04-24T12:12:32,765 adding 'stk/molecular/topology_graphs/cage/two_plus_three/six_plus_nine.py' 2020-04-24T12:12:32,768 adding 'stk/molecular/topology_graphs/cage/two_plus_three/twenty_plus_thirty.py' 2020-04-24T12:12:32,770 adding 'stk/molecular/topology_graphs/cage/two_plus_three/two_plus_three.py' 2020-04-24T12:12:32,774 adding 'stk/molecular/topology_graphs/cof/__init__.py' 2020-04-24T12:12:32,778 adding 'stk/molecular/topology_graphs/cof/cof.py' 2020-04-24T12:12:32,781 adding 'stk/molecular/topology_graphs/cof/edge.py' 2020-04-24T12:12:32,784 adding 'stk/molecular/topology_graphs/cof/hexagonal.py' 2020-04-24T12:12:32,786 adding 'stk/molecular/topology_graphs/cof/honeycomb.py' 2020-04-24T12:12:32,789 adding 'stk/molecular/topology_graphs/cof/kagome.py' 2020-04-24T12:12:32,792 adding 'stk/molecular/topology_graphs/cof/linkerless_honeycomb.py' 2020-04-24T12:12:32,794 adding 'stk/molecular/topology_graphs/cof/square.py' 2020-04-24T12:12:32,797 adding 'stk/molecular/topology_graphs/cof/vertices.py' 2020-04-24T12:12:32,801 adding 'stk/molecular/topology_graphs/host_guest/__init__.py' 2020-04-24T12:12:32,804 adding 'stk/molecular/topology_graphs/host_guest/complex.py' 2020-04-24T12:12:32,806 adding 'stk/molecular/topology_graphs/host_guest/vertices.py' 2020-04-24T12:12:32,815 adding 'stk/molecular/topology_graphs/macrocycle/__init__.py' 2020-04-24T12:12:32,819 adding 'stk/molecular/topology_graphs/macrocycle/macrocycle.py' 2020-04-24T12:12:32,822 adding 'stk/molecular/topology_graphs/macrocycle/vertices.py' 2020-04-24T12:12:32,825 adding 'stk/molecular/topology_graphs/polymer/__init__.py' 2020-04-24T12:12:32,830 adding 'stk/molecular/topology_graphs/polymer/linear/__init__.py' 2020-04-24T12:12:32,836 adding 'stk/molecular/topology_graphs/polymer/linear/linear.py' 2020-04-24T12:12:32,841 adding 'stk/molecular/topology_graphs/polymer/linear/vertices.py' 2020-04-24T12:12:32,846 adding 'stk/molecular/topology_graphs/rotaxane/__init__.py' 2020-04-24T12:12:32,850 adding 'stk/molecular/topology_graphs/rotaxane/nrotaxane.py' 2020-04-24T12:12:32,853 adding 'stk/molecular/topology_graphs/rotaxane/vertices.py' 2020-04-24T12:12:32,856 adding 'stk/molecular/topology_graphs/topology_graph/__init__.py' 2020-04-24T12:12:32,859 adding 'stk/molecular/topology_graphs/topology_graph/construction_result.py' 2020-04-24T12:12:32,862 adding 'stk/molecular/topology_graphs/topology_graph/edge.py' 2020-04-24T12:12:32,864 adding 'stk/molecular/topology_graphs/topology_graph/edge_group.py' 2020-04-24T12:12:32,867 adding 'stk/molecular/topology_graphs/topology_graph/vertex.py' 2020-04-24T12:12:32,871 adding 'stk/molecular/topology_graphs/topology_graph/construction_state/__init__.py' 2020-04-24T12:12:32,875 adding 'stk/molecular/topology_graphs/topology_graph/construction_state/construction_state.py' 2020-04-24T12:12:32,879 adding 'stk/molecular/topology_graphs/topology_graph/construction_state/graph_state.py' 2020-04-24T12:12:32,882 adding 'stk/molecular/topology_graphs/topology_graph/construction_state/molecule_state/__init__.py' 2020-04-24T12:12:32,885 adding 'stk/molecular/topology_graphs/topology_graph/construction_state/molecule_state/deletions_summary.py' 2020-04-24T12:12:32,888 adding 'stk/molecular/topology_graphs/topology_graph/construction_state/molecule_state/molecule_state.py' 2020-04-24T12:12:32,892 adding 'stk/molecular/topology_graphs/topology_graph/construction_state/molecule_state/placements_summary/__init__.py' 2020-04-24T12:12:32,895 adding 'stk/molecular/topology_graphs/topology_graph/construction_state/molecule_state/placements_summary/atom_batch.py' 2020-04-24T12:12:32,897 adding 'stk/molecular/topology_graphs/topology_graph/construction_state/molecule_state/placements_summary/bond_batch.py' 2020-04-24T12:12:32,900 adding 'stk/molecular/topology_graphs/topology_graph/construction_state/molecule_state/placements_summary/placements_summary.py' 2020-04-24T12:12:32,904 adding 'stk/molecular/topology_graphs/topology_graph/construction_state/molecule_state/reactions_summary/__init__.py' 2020-04-24T12:12:32,907 adding 'stk/molecular/topology_graphs/topology_graph/construction_state/molecule_state/reactions_summary/atom_batch.py' 2020-04-24T12:12:32,910 adding 'stk/molecular/topology_graphs/topology_graph/construction_state/molecule_state/reactions_summary/bond_batch.py' 2020-04-24T12:12:32,912 adding 'stk/molecular/topology_graphs/topology_graph/construction_state/molecule_state/reactions_summary/reactions_summary.py' 2020-04-24T12:12:32,916 adding 'stk/molecular/topology_graphs/topology_graph/topology_graph/__init__.py' 2020-04-24T12:12:32,921 adding 'stk/molecular/topology_graphs/topology_graph/topology_graph/topology_graph.py' 2020-04-24T12:12:32,926 adding 'stk/molecular/topology_graphs/topology_graph/topology_graph/implementations/__init__.py' 2020-04-24T12:12:32,928 adding 'stk/molecular/topology_graphs/topology_graph/topology_graph/implementations/parallel.py' 2020-04-24T12:12:32,931 adding 'stk/molecular/topology_graphs/topology_graph/topology_graph/implementations/serial.py' 2020-04-24T12:12:32,934 adding 'stk/molecular/topology_graphs/topology_graph/topology_graph/implementations/utilities.py' 2020-04-24T12:12:32,938 adding 'stk/molecular/topology_graphs/utilities/__init__.py' 2020-04-24T12:12:32,940 adding 'stk/molecular/topology_graphs/utilities/edge_sorter.py' 2020-04-24T12:12:32,943 adding 'stk/molecular/topology_graphs/utilities/functional_group_sorter.py' 2020-04-24T12:12:32,945 adding 'stk/molecular/topology_graphs/utilities/sorter.py' 2020-04-24T12:12:32,949 adding 'stk/serialization/__init__.py' 2020-04-24T12:12:32,953 adding 'stk/serialization/json/__init__.py' 2020-04-24T12:12:32,956 adding 'stk/serialization/json/deserializers/__init__.py' 2020-04-24T12:12:32,959 adding 'stk/serialization/json/deserializers/constructed_molecule.py' 2020-04-24T12:12:32,962 adding 'stk/serialization/json/deserializers/molecule.py' 2020-04-24T12:12:32,964 adding 'stk/serialization/json/deserializers/utilities.py' 2020-04-24T12:12:32,968 adding 'stk/serialization/json/serializers/__init__.py' 2020-04-24T12:12:32,971 adding 'stk/serialization/json/serializers/constructed_molecule/__init__.py' 2020-04-24T12:12:32,974 adding 'stk/serialization/json/serializers/constructed_molecule/constructed_molecule.py' 2020-04-24T12:12:32,978 adding 'stk/serialization/json/serializers/molecule/__init__.py' 2020-04-24T12:12:32,980 adding 'stk/serialization/json/serializers/molecule/molecule.py' 2020-04-24T12:12:32,983 adding 'stk/serialization/json/serializers/molecule/utilities.py' 2020-04-24T12:12:32,987 adding 'stk/utilities/__init__.py' 2020-04-24T12:12:32,995 adding 'stk/utilities/utilities.py' 2020-04-24T12:12:33,000 adding 'stk-2020.4.24.0.dist-info/METADATA' 2020-04-24T12:12:33,002 adding 'stk-2020.4.24.0.dist-info/WHEEL' 2020-04-24T12:12:33,004 adding 'stk-2020.4.24.0.dist-info/top_level.txt' 2020-04-24T12:12:33,009 adding 'stk-2020.4.24.0.dist-info/RECORD' 2020-04-24T12:12:33,041 removing build/bdist.linux-armv7l/wheel 2020-04-24T12:12:33,459 Building wheel for stk (setup.py): finished with status 'done' 2020-04-24T12:12:33,468 Created wheel for stk: filename=stk-2020.4.24.0-py3-none-any.whl size=255545 sha256=0f764b70993d51eb35d4b28a40b65c571e7dda196e6374b9a079a4b258bedc16 2020-04-24T12:12:33,468 Stored in directory: /tmp/pip-ephem-wheel-cache-wez1_gfx/wheels/a3/75/6b/8186d2ba36140618b23864e123aeabaae5b1f8b90bad1e6f2b 2020-04-24T12:12:33,472 Successfully built stk 2020-04-24T12:12:33,522 Cleaning up... 2020-04-24T12:12:33,523 Removing source in /tmp/pip-wheel-38c48k3y/stk 2020-04-24T12:12:34,038 Removed build tracker: '/tmp/pip-req-tracker-jp7mgro2'