2020-04-27T10:26:23,361 Created temporary directory: /tmp/pip-ephem-wheel-cache-bcs1vyld
2020-04-27T10:26:23,365 Created temporary directory: /tmp/pip-req-tracker-uu53lzg6
2020-04-27T10:26:23,366 Initialized build tracking at /tmp/pip-req-tracker-uu53lzg6
2020-04-27T10:26:23,368 Created build tracker: /tmp/pip-req-tracker-uu53lzg6
2020-04-27T10:26:23,368 Entered build tracker: /tmp/pip-req-tracker-uu53lzg6
2020-04-27T10:26:23,369 Created temporary directory: /tmp/pip-wheel-n1zpgk8d
2020-04-27T10:26:23,375 1 location(s) to search for versions of ont-bonito:
2020-04-27T10:26:23,375 * https://pypi.org/simple/ont-bonito/
2020-04-27T10:26:23,376 Fetching project page and analyzing links: https://pypi.org/simple/ont-bonito/
2020-04-27T10:26:23,378 Getting page https://pypi.org/simple/ont-bonito/
2020-04-27T10:26:23,381 Found index url https://pypi.org/simple
2020-04-27T10:26:23,609   Found link https://files.pythonhosted.org/packages/d9/db/561675d546075abac5f22cd30a78c084af0cf6aa376ace242405b801658f/ont-bonito-0.0.1.tar.gz#sha256=fd80e965c675250aa25d00121f9eb0787e3a878caecfd1946b9596c17f3dabfe (from https://pypi.org/simple/ont-bonito/), version: 0.0.1
2020-04-27T10:26:23,610   Found link https://files.pythonhosted.org/packages/1e/d1/8e91e83711e166c9da2dd39017c9ac471c516b87b48bcdc0e25a4cb12d95/ont-bonito-0.0.3.tar.gz#sha256=63095382dbacb5c9a4cdb68f44433d577875a92f94d70eda07e11124f218fe95 (from https://pypi.org/simple/ont-bonito/), version: 0.0.3
2020-04-27T10:26:23,611   Found link https://files.pythonhosted.org/packages/e6/97/ee764ddc586c5fcf9be804289a26d80ce31a1eabfd550b1276dead9b9de1/ont-bonito-0.0.4.tar.gz#sha256=1e0f833fc6a7fdcb64ffb344da6cf77bfdf283bcfe1c1e7e98d3e8c28f0adf62 (from https://pypi.org/simple/ont-bonito/), version: 0.0.4
2020-04-27T10:26:23,612   Found link https://files.pythonhosted.org/packages/51/2a/771af15029be16025022b91ee7675af7945fc0350e3c1190c7d1cad934d3/ont-bonito-0.0.5.tar.gz#sha256=a735e7998bad0e920a0ace486c92bc6628aff263b374267cf7ac6cba8b75c1fa (from https://pypi.org/simple/ont-bonito/), version: 0.0.5
2020-04-27T10:26:23,613   Found link https://files.pythonhosted.org/packages/60/99/f9b4e7db2b81d07ca49873fef96a1d3378248ee8730cf07fda1231cd8910/ont-bonito-0.0.7.tar.gz#sha256=a0d0edc70b6ae0f6e0153697a8fcb8237f0b4c4067e504ded202ed33b9bd6e54 (from https://pypi.org/simple/ont-bonito/), version: 0.0.7
2020-04-27T10:26:23,613   Found link https://files.pythonhosted.org/packages/3a/cc/a64e90955addd8b831e43decc9ee2cd8f8395c7c44ceef250bc60f2550f8/ont-bonito-0.0.8.tar.gz#sha256=8ee2c91f073ac448b2a330e12a4d922280e596b15e40170cd15b4f612ace7c53 (from https://pypi.org/simple/ont-bonito/), version: 0.0.8
2020-04-27T10:26:23,614   Found link https://files.pythonhosted.org/packages/29/db/59fef46c323e86347b7558ad3c5a775037ef6923bc62b7e15173fefeed82/ont-bonito-0.1.0.tar.gz#sha256=0098ce0cb09f022b7df4534dc7ba7f09cf4b30e358778fbed4adb200966e453d (from https://pypi.org/simple/ont-bonito/), version: 0.1.0
2020-04-27T10:26:23,615   Found link https://files.pythonhosted.org/packages/78/52/9f978f27aa96ccbb07ed86f25d599c28c80f41f6414f8035372e7acc00f6/ont-bonito-0.1.2.tar.gz#sha256=eb2b8ef67dd3c28f2ff44b5ec62c57964eb0114bcab32350cb720253a083c8e9 (from https://pypi.org/simple/ont-bonito/), version: 0.1.2
2020-04-27T10:26:23,615   Found link https://files.pythonhosted.org/packages/9c/53/044d2ab2e0d2c00f5331aa4f1623c888dbc818c7fba70d069d80529ed113/ont-bonito-0.1.3.tar.gz#sha256=23f9e99bf21d61e6586037be15d2dfefb4af5277612ae3f07ac91a3cec27ce10 (from https://pypi.org/simple/ont-bonito/), version: 0.1.3
2020-04-27T10:26:23,616   Found link https://files.pythonhosted.org/packages/59/8d/0c2eb31f833160e51648eae8d49bd6610bd6fad6ae5879e22a76187b5979/ont-bonito-0.1.4.tar.gz#sha256=3fc8df5ca099607eaabd745afd2de156d981b24f22e8b54ccaf53661b3dbb274 (from https://pypi.org/simple/ont-bonito/), version: 0.1.4
2020-04-27T10:26:23,627 Given no hashes to check 1 links for project 'ont-bonito': discarding no candidates
2020-04-27T10:26:23,629 Using version 0.1.4 (newest of versions: 0.1.4)
2020-04-27T10:26:23,634 Collecting ont-bonito==0.1.4
2020-04-27T10:26:23,638   Created temporary directory: /tmp/pip-unpack-__0e1p8j
2020-04-27T10:26:24,404   Downloading ont-bonito-0.1.4.tar.gz (25.1 MB)
2020-04-27T10:26:30,988   Added ont-bonito==0.1.4 from https://files.pythonhosted.org/packages/59/8d/0c2eb31f833160e51648eae8d49bd6610bd6fad6ae5879e22a76187b5979/ont-bonito-0.1.4.tar.gz#sha256=3fc8df5ca099607eaabd745afd2de156d981b24f22e8b54ccaf53661b3dbb274 to build tracker '/tmp/pip-req-tracker-uu53lzg6'
2020-04-27T10:26:30,990     Running setup.py (path:/tmp/pip-wheel-n1zpgk8d/ont-bonito/setup.py) egg_info for package ont-bonito
2020-04-27T10:26:30,991     Running command python setup.py egg_info
2020-04-27T10:26:32,854     running egg_info
2020-04-27T10:26:32,859     creating /tmp/pip-wheel-n1zpgk8d/ont-bonito/pip-egg-info/ont_bonito.egg-info
2020-04-27T10:26:32,861     writing entry points to /tmp/pip-wheel-n1zpgk8d/ont-bonito/pip-egg-info/ont_bonito.egg-info/entry_points.txt
2020-04-27T10:26:32,863     writing top-level names to /tmp/pip-wheel-n1zpgk8d/ont-bonito/pip-egg-info/ont_bonito.egg-info/top_level.txt
2020-04-27T10:26:32,865     writing requirements to /tmp/pip-wheel-n1zpgk8d/ont-bonito/pip-egg-info/ont_bonito.egg-info/requires.txt
2020-04-27T10:26:32,868     writing /tmp/pip-wheel-n1zpgk8d/ont-bonito/pip-egg-info/ont_bonito.egg-info/PKG-INFO
2020-04-27T10:26:32,872     writing dependency_links to /tmp/pip-wheel-n1zpgk8d/ont-bonito/pip-egg-info/ont_bonito.egg-info/dependency_links.txt
2020-04-27T10:26:32,875     writing manifest file '/tmp/pip-wheel-n1zpgk8d/ont-bonito/pip-egg-info/ont_bonito.egg-info/SOURCES.txt'
2020-04-27T10:26:33,193     reading manifest file '/tmp/pip-wheel-n1zpgk8d/ont-bonito/pip-egg-info/ont_bonito.egg-info/SOURCES.txt'
2020-04-27T10:26:33,193     reading manifest template 'MANIFEST.in'
2020-04-27T10:26:33,197     writing manifest file '/tmp/pip-wheel-n1zpgk8d/ont-bonito/pip-egg-info/ont_bonito.egg-info/SOURCES.txt'
2020-04-27T10:26:33,339   Source in /tmp/pip-wheel-n1zpgk8d/ont-bonito has version 0.1.4, which satisfies requirement ont-bonito==0.1.4 from https://files.pythonhosted.org/packages/59/8d/0c2eb31f833160e51648eae8d49bd6610bd6fad6ae5879e22a76187b5979/ont-bonito-0.1.4.tar.gz#sha256=3fc8df5ca099607eaabd745afd2de156d981b24f22e8b54ccaf53661b3dbb274
2020-04-27T10:26:33,351   Removed ont-bonito==0.1.4 from https://files.pythonhosted.org/packages/59/8d/0c2eb31f833160e51648eae8d49bd6610bd6fad6ae5879e22a76187b5979/ont-bonito-0.1.4.tar.gz#sha256=3fc8df5ca099607eaabd745afd2de156d981b24f22e8b54ccaf53661b3dbb274 from build tracker '/tmp/pip-req-tracker-uu53lzg6'
2020-04-27T10:26:33,356 Building wheels for collected packages: ont-bonito
2020-04-27T10:26:33,364   Created temporary directory: /tmp/pip-wheel-q4s984bt
2020-04-27T10:26:33,365   Building wheel for ont-bonito (setup.py): started
2020-04-27T10:26:33,366   Destination directory: /tmp/pip-wheel-q4s984bt
2020-04-27T10:26:33,367   Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-n1zpgk8d/ont-bonito/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-n1zpgk8d/ont-bonito/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-q4s984bt
2020-04-27T10:26:35,263   running bdist_wheel
2020-04-27T10:26:35,275   running build
2020-04-27T10:26:35,276   running build_py
2020-04-27T10:26:35,568   creating build
2020-04-27T10:26:35,569   creating build/lib
2020-04-27T10:26:35,570   creating build/lib/bonito
2020-04-27T10:26:35,572   copying bonito/download.py -> build/lib/bonito
2020-04-27T10:26:35,576   copying bonito/tune.py -> build/lib/bonito
2020-04-27T10:26:35,580   copying bonito/training.py -> build/lib/bonito
2020-04-27T10:26:35,583   copying bonito/__init__.py -> build/lib/bonito
2020-04-27T10:26:35,586   copying bonito/evaluate.py -> build/lib/bonito
2020-04-27T10:26:35,590   copying bonito/train.py -> build/lib/bonito
2020-04-27T10:26:35,593   copying bonito/basecaller.py -> build/lib/bonito
2020-04-27T10:26:35,596   copying bonito/model.py -> build/lib/bonito
2020-04-27T10:26:35,601   copying bonito/view.py -> build/lib/bonito
2020-04-27T10:26:35,607   copying bonito/io.py -> build/lib/bonito
2020-04-27T10:26:35,613   copying bonito/convert.py -> build/lib/bonito
2020-04-27T10:26:35,621   copying bonito/util.py -> build/lib/bonito
2020-04-27T10:26:35,624   running egg_info
2020-04-27T10:26:35,650   writing dependency_links to ont_bonito.egg-info/dependency_links.txt
2020-04-27T10:26:35,653   writing entry points to ont_bonito.egg-info/entry_points.txt
2020-04-27T10:26:35,654   writing requirements to ont_bonito.egg-info/requires.txt
2020-04-27T10:26:35,657   writing ont_bonito.egg-info/PKG-INFO
2020-04-27T10:26:35,661   writing top-level names to ont_bonito.egg-info/top_level.txt
2020-04-27T10:26:35,670   reading manifest file 'ont_bonito.egg-info/SOURCES.txt'
2020-04-27T10:26:35,674   reading manifest template 'MANIFEST.in'
2020-04-27T10:26:35,683   writing manifest file 'ont_bonito.egg-info/SOURCES.txt'
2020-04-27T10:26:35,688   creating build/lib/bonito/data
2020-04-27T10:26:35,689   copying bonito/data/README.md -> build/lib/bonito/data
2020-04-27T10:26:35,693   creating build/lib/bonito/models
2020-04-27T10:26:35,693   creating build/lib/bonito/models/configs
2020-04-27T10:26:35,695   copying bonito/models/configs/quartznet5x5.toml -> build/lib/bonito/models/configs
2020-04-27T10:26:35,699   creating build/lib/bonito/models/dna_r9.4.1
2020-04-27T10:26:35,700   copying bonito/models/dna_r9.4.1/#config.toml# -> build/lib/bonito/models/dna_r9.4.1
2020-04-27T10:26:35,704   copying bonito/models/dna_r9.4.1/config.toml -> build/lib/bonito/models/dna_r9.4.1
2020-04-27T10:26:35,707   copying bonito/models/dna_r9.4.1/weights_1.tar -> build/lib/bonito/models/dna_r9.4.1
2020-04-27T10:26:36,880   installing to build/bdist.linux-armv7l/wheel
2020-04-27T10:26:36,881   running install
2020-04-27T10:26:36,882   running install_lib
2020-04-27T10:26:36,889   creating build/bdist.linux-armv7l
2020-04-27T10:26:36,890   creating build/bdist.linux-armv7l/wheel
2020-04-27T10:26:36,893   creating build/bdist.linux-armv7l/wheel/bonito
2020-04-27T10:26:36,894   copying build/lib/bonito/download.py -> build/bdist.linux-armv7l/wheel/bonito
2020-04-27T10:26:36,898   copying build/lib/bonito/tune.py -> build/bdist.linux-armv7l/wheel/bonito
2020-04-27T10:26:36,902   copying build/lib/bonito/training.py -> build/bdist.linux-armv7l/wheel/bonito
2020-04-27T10:26:36,906   copying build/lib/bonito/__init__.py -> build/bdist.linux-armv7l/wheel/bonito
2020-04-27T10:26:36,909   copying build/lib/bonito/evaluate.py -> build/bdist.linux-armv7l/wheel/bonito
2020-04-27T10:26:36,912   copying build/lib/bonito/train.py -> build/bdist.linux-armv7l/wheel/bonito
2020-04-27T10:26:36,917   creating build/bdist.linux-armv7l/wheel/bonito/models
2020-04-27T10:26:36,919   creating build/bdist.linux-armv7l/wheel/bonito/models/configs
2020-04-27T10:26:36,921   copying build/lib/bonito/models/configs/quartznet5x5.toml -> build/bdist.linux-armv7l/wheel/bonito/models/configs
2020-04-27T10:26:36,926   creating build/bdist.linux-armv7l/wheel/bonito/models/dna_r9.4.1
2020-04-27T10:26:36,927   copying build/lib/bonito/models/dna_r9.4.1/weights_1.tar -> build/bdist.linux-armv7l/wheel/bonito/models/dna_r9.4.1
2020-04-27T10:26:38,097   copying build/lib/bonito/models/dna_r9.4.1/config.toml -> build/bdist.linux-armv7l/wheel/bonito/models/dna_r9.4.1
2020-04-27T10:26:38,100   copying build/lib/bonito/models/dna_r9.4.1/#config.toml# -> build/bdist.linux-armv7l/wheel/bonito/models/dna_r9.4.1
2020-04-27T10:26:38,103   copying build/lib/bonito/basecaller.py -> build/bdist.linux-armv7l/wheel/bonito
2020-04-27T10:26:38,107   copying build/lib/bonito/model.py -> build/bdist.linux-armv7l/wheel/bonito
2020-04-27T10:26:38,110   copying build/lib/bonito/view.py -> build/bdist.linux-armv7l/wheel/bonito
2020-04-27T10:26:38,113   copying build/lib/bonito/io.py -> build/bdist.linux-armv7l/wheel/bonito
2020-04-27T10:26:38,117   copying build/lib/bonito/convert.py -> build/bdist.linux-armv7l/wheel/bonito
2020-04-27T10:26:38,121   creating build/bdist.linux-armv7l/wheel/bonito/data
2020-04-27T10:26:38,123   copying build/lib/bonito/data/README.md -> build/bdist.linux-armv7l/wheel/bonito/data
2020-04-27T10:26:38,127   copying build/lib/bonito/util.py -> build/bdist.linux-armv7l/wheel/bonito
2020-04-27T10:26:38,132   running install_egg_info
2020-04-27T10:26:38,153   Copying ont_bonito.egg-info to build/bdist.linux-armv7l/wheel/ont_bonito-0.1.4-py3.5.egg-info
2020-04-27T10:26:38,173   running install_scripts
2020-04-27T10:26:38,346   creating build/bdist.linux-armv7l/wheel/ont_bonito-0.1.4.dist-info/WHEEL
2020-04-27T10:26:45,384   Building wheel for ont-bonito (setup.py): finished with status 'done'
2020-04-27T10:26:45,741   Created wheel for ont-bonito: filename=ont_bonito-0.1.4-py3-none-any.whl size=25065371 sha256=95ecf6751cac2e62cafedee8c7fd36395aa3d06683b465f05f38fc63217c76ec
2020-04-27T10:26:45,742   Stored in directory: /tmp/pip-ephem-wheel-cache-bcs1vyld/wheels/82/d9/c5/619512c3916b1bc0538bbe45cd76e9b237339db2af0a3dea00
2020-04-27T10:26:45,745 Successfully built ont-bonito
2020-04-27T10:26:52,416 Cleaning up...
2020-04-27T10:26:52,418   Removing source in /tmp/pip-wheel-n1zpgk8d/ont-bonito
2020-04-27T10:26:52,550 Removed build tracker: '/tmp/pip-req-tracker-uu53lzg6'