2020-05-02T12:21:53,833 Created temporary directory: /tmp/pip-ephem-wheel-cache-du5bf8cu 2020-05-02T12:21:53,836 Created temporary directory: /tmp/pip-req-tracker-z5i_n7c_ 2020-05-02T12:21:53,837 Initialized build tracking at /tmp/pip-req-tracker-z5i_n7c_ 2020-05-02T12:21:53,839 Created build tracker: /tmp/pip-req-tracker-z5i_n7c_ 2020-05-02T12:21:53,839 Entered build tracker: /tmp/pip-req-tracker-z5i_n7c_ 2020-05-02T12:21:53,841 Created temporary directory: /tmp/pip-wheel-4utj0l7_ 2020-05-02T12:21:53,847 1 location(s) to search for versions of BIO-PEPPA: 2020-05-02T12:21:53,847 * https://pypi.org/simple/bio-peppa/ 2020-05-02T12:21:53,847 Fetching project page and analyzing links: https://pypi.org/simple/bio-peppa/ 2020-05-02T12:21:53,849 Getting page https://pypi.org/simple/bio-peppa/ 2020-05-02T12:21:53,853 Found index url https://pypi.org/simple 2020-05-02T12:21:54,083 Skipping link: No binaries permitted for BIO-PEPPA: https://files.pythonhosted.org/packages/87/db/f34bc44c725d7f56b0d08d89db466ae9570dbe7b251433426b6ec47f38be/BIO_PEPPA-1.0-py3-none-any.whl#sha256=c646806d2e20ef5c690d95b40c56698b0fbb6ee9be367097c782d21a51d042c4 (from https://pypi.org/simple/bio-peppa/) 2020-05-02T12:21:54,084 Found link https://files.pythonhosted.org/packages/88/ed/c25efc64f5866f4186a017d1bdb0b8987360a5b98397ebac2c98fed4361f/BIO-PEPPA-1.1.tar.gz#sha256=cf49042bdfcbe20990821dea1ae7a0482f496524ce12a8bb1be8fccc1bf5a413 (from https://pypi.org/simple/bio-peppa/), version: 1.1 2020-05-02T12:21:54,085 Found link https://files.pythonhosted.org/packages/fd/80/a43287adbb49ed17adc0bdd02ad2a9e486093ed0bea8c575dd172ea57046/BIO-PEPPA-1.1.1.tar.gz#sha256=1d5bb971080deb25fd44e4fe1db7a6374476765348716dec9cc3cbd9e2ece8dc (from https://pypi.org/simple/bio-peppa/), version: 1.1.1 2020-05-02T12:21:54,086 Found link https://files.pythonhosted.org/packages/7f/85/58cdda2817cd80576cce7ebfde39c4212222ae64a8d87f4da9eaf7d68900/BIO-PEPPA-1.1.2.tar.gz#sha256=6a86a263858ef1b7d015348d785ef8c9b1acffad3b4dedca2d42e97936767f04 (from https://pypi.org/simple/bio-peppa/), version: 1.1.2 2020-05-02T12:21:54,087 Found link https://files.pythonhosted.org/packages/6a/2b/6c7422e2de541222ea5ff1646372d3616384bfe4622b4ad76004959d62b3/BIO-PEPPA-1.1.3.tar.gz#sha256=32a5de0577a72fa4693f4f134199f9c281eaaa16be7ef945d60bd64a2e5b6e2d (from https://pypi.org/simple/bio-peppa/), version: 1.1.3 2020-05-02T12:21:54,087 Found link https://files.pythonhosted.org/packages/68/9c/0fe6af3f7b6b878850e582390094323c27f596df258456de53b540ca56d9/BIO-PEPPA-1.1.4.tar.gz#sha256=e97ce75b3efc4237bd284a117c07b67be24ad5203f124f76ff437b23c6e3bdb4 (from https://pypi.org/simple/bio-peppa/), version: 1.1.4 2020-05-02T12:21:54,088 Found link https://files.pythonhosted.org/packages/b7/60/0d3bf1aad6f6cfbbf953018f6745978cfb76e1ce678aa6385cef990a081b/BIO-PEPPA-1.1.5.tar.gz#sha256=cfe6d857da7534f95fc5457e21a32df9be0814cf31457796ba0243cfff4ffb03 (from https://pypi.org/simple/bio-peppa/), version: 1.1.5 2020-05-02T12:21:54,088 Found link https://files.pythonhosted.org/packages/13/b4/dacf1f0321c702f9460e472aa82cd058f59d6c2ee342419acf8d7b2884ac/BIO-PEPPA-1.1.6.tar.gz#sha256=efd6b6f1c4ad975beacd9e7b16f84655a85a73df5f644e440ba949e56834ab4d (from https://pypi.org/simple/bio-peppa/), version: 1.1.6 2020-05-02T12:21:54,089 Found link https://files.pythonhosted.org/packages/5e/48/1f5c643277f777221492b688e1522873e8728e233663b5a27b1ece1ebad7/BIO-PEPPA-1.1.8.tar.gz#sha256=4b5499772fe9adff6aecf7105e0362c1fbef5c2d028bfd8df9c3e95693b7a3f4 (from https://pypi.org/simple/bio-peppa/), version: 1.1.8 2020-05-02T12:21:54,100 Given no hashes to check 1 links for project 'BIO-PEPPA': discarding no candidates 2020-05-02T12:21:54,101 Using version 1.1.8 (newest of versions: 1.1.8) 2020-05-02T12:21:54,107 Collecting BIO-PEPPA==1.1.8 2020-05-02T12:21:54,111 Created temporary directory: /tmp/pip-unpack-gfs7f2bu 2020-05-02T12:21:56,571 Downloading BIO-PEPPA-1.1.8.tar.gz (32.6 MB) 2020-05-02T12:22:10,271 Added BIO-PEPPA==1.1.8 from https://files.pythonhosted.org/packages/5e/48/1f5c643277f777221492b688e1522873e8728e233663b5a27b1ece1ebad7/BIO-PEPPA-1.1.8.tar.gz#sha256=4b5499772fe9adff6aecf7105e0362c1fbef5c2d028bfd8df9c3e95693b7a3f4 to build tracker '/tmp/pip-req-tracker-z5i_n7c_' 2020-05-02T12:22:10,273 Running setup.py (path:/tmp/pip-wheel-4utj0l7_/BIO-PEPPA/setup.py) egg_info for package BIO-PEPPA 2020-05-02T12:22:10,274 Running command python setup.py egg_info 2020-05-02T12:22:12,077 running egg_info 2020-05-02T12:22:12,082 creating /tmp/pip-wheel-4utj0l7_/BIO-PEPPA/pip-egg-info/BIO_PEPPA.egg-info 2020-05-02T12:22:12,084 writing dependency_links to /tmp/pip-wheel-4utj0l7_/BIO-PEPPA/pip-egg-info/BIO_PEPPA.egg-info/dependency_links.txt 2020-05-02T12:22:12,086 writing requirements to /tmp/pip-wheel-4utj0l7_/BIO-PEPPA/pip-egg-info/BIO_PEPPA.egg-info/requires.txt 2020-05-02T12:22:12,088 writing entry points to /tmp/pip-wheel-4utj0l7_/BIO-PEPPA/pip-egg-info/BIO_PEPPA.egg-info/entry_points.txt 2020-05-02T12:22:12,090 writing top-level names to /tmp/pip-wheel-4utj0l7_/BIO-PEPPA/pip-egg-info/BIO_PEPPA.egg-info/top_level.txt 2020-05-02T12:22:12,092 writing /tmp/pip-wheel-4utj0l7_/BIO-PEPPA/pip-egg-info/BIO_PEPPA.egg-info/PKG-INFO 2020-05-02T12:22:12,097 writing manifest file '/tmp/pip-wheel-4utj0l7_/BIO-PEPPA/pip-egg-info/BIO_PEPPA.egg-info/SOURCES.txt' 2020-05-02T12:22:12,399 reading manifest file '/tmp/pip-wheel-4utj0l7_/BIO-PEPPA/pip-egg-info/BIO_PEPPA.egg-info/SOURCES.txt' 2020-05-02T12:22:12,402 reading manifest template 'MANIFEST.in' 2020-05-02T12:22:12,412 writing manifest file '/tmp/pip-wheel-4utj0l7_/BIO-PEPPA/pip-egg-info/BIO_PEPPA.egg-info/SOURCES.txt' 2020-05-02T12:22:12,540 Source in /tmp/pip-wheel-4utj0l7_/BIO-PEPPA has version 1.1.8, which satisfies requirement BIO-PEPPA==1.1.8 from https://files.pythonhosted.org/packages/5e/48/1f5c643277f777221492b688e1522873e8728e233663b5a27b1ece1ebad7/BIO-PEPPA-1.1.8.tar.gz#sha256=4b5499772fe9adff6aecf7105e0362c1fbef5c2d028bfd8df9c3e95693b7a3f4 2020-05-02T12:22:12,542 Removed BIO-PEPPA==1.1.8 from https://files.pythonhosted.org/packages/5e/48/1f5c643277f777221492b688e1522873e8728e233663b5a27b1ece1ebad7/BIO-PEPPA-1.1.8.tar.gz#sha256=4b5499772fe9adff6aecf7105e0362c1fbef5c2d028bfd8df9c3e95693b7a3f4 from build tracker '/tmp/pip-req-tracker-z5i_n7c_' 2020-05-02T12:22:12,545 Building wheels for collected packages: BIO-PEPPA 2020-05-02T12:22:12,552 Created temporary directory: /tmp/pip-wheel-tobmepgd 2020-05-02T12:22:12,553 Building wheel for BIO-PEPPA (setup.py): started 2020-05-02T12:22:12,554 Destination directory: /tmp/pip-wheel-tobmepgd 2020-05-02T12:22:12,554 Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-4utj0l7_/BIO-PEPPA/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-4utj0l7_/BIO-PEPPA/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-tobmepgd 2020-05-02T12:22:14,362 running bdist_wheel 2020-05-02T12:22:14,374 running build 2020-05-02T12:22:14,375 running build_py 2020-05-02T12:22:14,668 creating build 2020-05-02T12:22:14,668 creating build/lib 2020-05-02T12:22:14,669 creating build/lib/PEPPA 2020-05-02T12:22:14,672 copying ./PEPPA_parser.py -> build/lib/PEPPA 2020-05-02T12:22:14,676 copying ./__init__.py -> build/lib/PEPPA 2020-05-02T12:22:14,678 copying ./PEPPA.py -> build/lib/PEPPA 2020-05-02T12:22:14,685 running egg_info 2020-05-02T12:22:14,710 writing BIO_PEPPA.egg-info/PKG-INFO 2020-05-02T12:22:14,713 writing dependency_links to BIO_PEPPA.egg-info/dependency_links.txt 2020-05-02T12:22:14,715 writing requirements to BIO_PEPPA.egg-info/requires.txt 2020-05-02T12:22:14,718 writing entry points to BIO_PEPPA.egg-info/entry_points.txt 2020-05-02T12:22:14,719 writing top-level names to BIO_PEPPA.egg-info/top_level.txt 2020-05-02T12:22:14,729 reading manifest file 'BIO_PEPPA.egg-info/SOURCES.txt' 2020-05-02T12:22:14,733 reading manifest template 'MANIFEST.in' 2020-05-02T12:22:14,743 writing manifest file 'BIO_PEPPA.egg-info/SOURCES.txt' 2020-05-02T12:22:14,750 copying ./LICENSE -> build/lib/PEPPA 2020-05-02T12:22:14,755 copying ./README.rst -> build/lib/PEPPA 2020-05-02T12:22:14,758 creating build/lib/PEPPA/dependencies 2020-05-02T12:22:14,759 copying ./dependencies/FastTreeMP -> build/lib/PEPPA/dependencies 2020-05-02T12:22:14,780 copying ./dependencies/makeblastdb -> build/lib/PEPPA/dependencies 2020-05-02T12:22:16,209 copying ./dependencies/rapidnj -> build/lib/PEPPA/dependencies 2020-05-02T12:22:16,354 copying ./dependencies/diamond -> build/lib/PEPPA/dependencies 2020-05-02T12:22:16,659 copying ./dependencies/mmseqs -> build/lib/PEPPA/dependencies 2020-05-02T12:22:17,172 copying ./dependencies/blastn -> build/lib/PEPPA/dependencies 2020-05-02T12:22:19,109 creating build/lib/PEPPA/modules 2020-05-02T12:22:19,111 copying ./modules/configure.py -> build/lib/PEPPA/modules 2020-05-02T12:22:19,116 copying ./modules/clust.py -> build/lib/PEPPA/modules 2020-05-02T12:22:19,120 copying ./modules/uberBlast.py -> build/lib/PEPPA/modules 2020-05-02T12:22:19,143 installing to build/bdist.linux-armv7l/wheel 2020-05-02T12:22:19,143 running install 2020-05-02T12:22:19,145 running install_lib 2020-05-02T12:22:19,151 creating build/bdist.linux-armv7l 2020-05-02T12:22:19,152 creating build/bdist.linux-armv7l/wheel 2020-05-02T12:22:19,155 creating build/bdist.linux-armv7l/wheel/PEPPA 2020-05-02T12:22:19,157 copying build/lib/PEPPA/PEPPA_parser.py -> build/bdist.linux-armv7l/wheel/PEPPA 2020-05-02T12:22:19,162 creating build/bdist.linux-armv7l/wheel/PEPPA/modules 2020-05-02T12:22:19,163 copying build/lib/PEPPA/modules/configure.py -> build/bdist.linux-armv7l/wheel/PEPPA/modules 2020-05-02T12:22:19,167 copying build/lib/PEPPA/modules/clust.py -> build/bdist.linux-armv7l/wheel/PEPPA/modules 2020-05-02T12:22:19,171 copying build/lib/PEPPA/modules/uberBlast.py -> build/bdist.linux-armv7l/wheel/PEPPA/modules 2020-05-02T12:22:19,176 copying build/lib/PEPPA/README.rst -> build/bdist.linux-armv7l/wheel/PEPPA 2020-05-02T12:22:19,179 copying build/lib/PEPPA/__init__.py -> build/bdist.linux-armv7l/wheel/PEPPA 2020-05-02T12:22:19,182 copying build/lib/PEPPA/LICENSE -> build/bdist.linux-armv7l/wheel/PEPPA 2020-05-02T12:22:19,191 creating build/bdist.linux-armv7l/wheel/PEPPA/dependencies 2020-05-02T12:22:19,193 copying build/lib/PEPPA/dependencies/FastTreeMP -> build/bdist.linux-armv7l/wheel/PEPPA/dependencies 2020-05-02T12:22:19,217 copying build/lib/PEPPA/dependencies/makeblastdb -> build/bdist.linux-armv7l/wheel/PEPPA/dependencies 2020-05-02T12:22:20,682 copying build/lib/PEPPA/dependencies/rapidnj -> build/bdist.linux-armv7l/wheel/PEPPA/dependencies 2020-05-02T12:22:20,833 copying build/lib/PEPPA/dependencies/diamond -> build/bdist.linux-armv7l/wheel/PEPPA/dependencies 2020-05-02T12:22:21,144 copying build/lib/PEPPA/dependencies/mmseqs -> build/bdist.linux-armv7l/wheel/PEPPA/dependencies 2020-05-02T12:22:21,678 copying build/lib/PEPPA/dependencies/blastn -> build/bdist.linux-armv7l/wheel/PEPPA/dependencies 2020-05-02T12:22:23,700 copying build/lib/PEPPA/PEPPA.py -> build/bdist.linux-armv7l/wheel/PEPPA 2020-05-02T12:22:23,707 running install_egg_info 2020-05-02T12:22:23,731 Copying BIO_PEPPA.egg-info to build/bdist.linux-armv7l/wheel/BIO_PEPPA-1.1.8-py3.5.egg-info 2020-05-02T12:22:23,755 running install_scripts 2020-05-02T12:22:23,931 creating build/bdist.linux-armv7l/wheel/BIO_PEPPA-1.1.8.dist-info/WHEEL 2020-05-02T12:22:49,112 Building wheel for BIO-PEPPA (setup.py): finished with status 'done' 2020-05-02T12:22:49,581 Created wheel for BIO-PEPPA: filename=BIO_PEPPA-1.1.8-py3-none-any.whl size=32873832 sha256=5e3a9c246a0d3f437c5b8e22c439d74d2b55488bde279120a96b7fd3130a70a3 2020-05-02T12:22:49,582 Stored in directory: /tmp/pip-ephem-wheel-cache-du5bf8cu/wheels/1b/24/1f/836250e2a0f86fe408ddbbec446d9a8982b4e50b6bced94472 2020-05-02T12:22:49,586 Successfully built BIO-PEPPA 2020-05-02T12:22:59,522 Cleaning up... 2020-05-02T12:22:59,525 Removing source in /tmp/pip-wheel-4utj0l7_/BIO-PEPPA 2020-05-02T12:22:59,771 Removed build tracker: '/tmp/pip-req-tracker-z5i_n7c_'