2020-05-10T10:02:06,749 Created temporary directory: /tmp/pip-ephem-wheel-cache-hha5ch_7
2020-05-10T10:02:06,752 Created temporary directory: /tmp/pip-req-tracker-swu20hhx
2020-05-10T10:02:06,753 Initialized build tracking at /tmp/pip-req-tracker-swu20hhx
2020-05-10T10:02:06,755 Created build tracker: /tmp/pip-req-tracker-swu20hhx
2020-05-10T10:02:06,755 Entered build tracker: /tmp/pip-req-tracker-swu20hhx
2020-05-10T10:02:06,757 Created temporary directory: /tmp/pip-wheel-4r82z6_x
2020-05-10T10:02:06,763 1 location(s) to search for versions of gromacs-py:
2020-05-10T10:02:06,763 * https://pypi.org/simple/gromacs-py/
2020-05-10T10:02:06,763 Fetching project page and analyzing links: https://pypi.org/simple/gromacs-py/
2020-05-10T10:02:06,765 Getting page https://pypi.org/simple/gromacs-py/
2020-05-10T10:02:06,769 Found index url https://pypi.org/simple
2020-05-10T10:02:06,999   Found link https://files.pythonhosted.org/packages/81/19/aa84c354170f3da5036b2aa34fa95f328ee3b45a094cc2bfe706c21c0526/gromacs_py-1.0.tar.gz#sha256=197044e70905dcc36bf134f402687088ce3f68307545dd9a724a12d110a0e5c1 (from https://pypi.org/simple/gromacs-py/), version: 1.0
2020-05-10T10:02:07,000   Found link https://files.pythonhosted.org/packages/ea/c2/02fafcd4fd0eb34015e76700fa471653c613ee58c8931c0c06c4453b9b99/gromacs_py-1.0.0.post1.tar.gz#sha256=41ab83f8a5e541ebb3e422c398dea77e06411a9a015605733c2a4bc64d639d73 (from https://pypi.org/simple/gromacs-py/), version: 1.0.0.post1
2020-05-10T10:02:07,001   Found link https://files.pythonhosted.org/packages/ac/24/d8cff1d35512873e821972103480ed8133bdd0b670dee7520e40a167ff7f/gromacs_py-1.0.0.post2.tar.gz#sha256=16dc1ed4b0a32f1decb4f26065c67a60e67a5845f5bbe54d31c4a8016c95254b (from https://pypi.org/simple/gromacs-py/), version: 1.0.0.post2
2020-05-10T10:02:07,002   Found link https://files.pythonhosted.org/packages/05/69/2ee04de7229b6a6f33033fdf6c1f3a69f7da76383ac8d488db94698cb3a0/gromacs_py-1.0.0.post3.tar.gz#sha256=c270fb4a29b2b369c8b9b0f2f0d58742d72a472ce8f51051b51ea5fc3c122934 (from https://pypi.org/simple/gromacs-py/), version: 1.0.0.post3
2020-05-10T10:02:07,003   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/38/22/84351d37feae9720f5193332d4e43f4f948a57b1bf3cac69675aa8eb255a/gromacs_py-1.0.0.post4-py3.6.egg#sha256=9cbe818f3b60fb2818b196041ecd5d711615b3e4063045707168588825e8accd (from https://pypi.org/simple/gromacs-py/)
2020-05-10T10:02:07,004   Found link https://files.pythonhosted.org/packages/a3/5b/afe1e0db10bcacbf20f6971f0a49c08bf37216f00869f699a0afd9a2017d/gromacs_py-1.0.0.post4.tar.gz#sha256=bbedcd55b4a808101681cae97bbf788274fe62de506c95042ac86c54a3358d08 (from https://pypi.org/simple/gromacs-py/), version: 1.0.0.post4
2020-05-10T10:02:07,004   Found link https://files.pythonhosted.org/packages/66/7e/255d8971aae057beacc0776bc07d530d36a723bb280607ac2a33073f83b6/gromacs_py-1.0.0.post5.tar.gz#sha256=c3d93bea02a2f98164b9a7a9af501e9240d427ba8dd5ebfd7238cb1a444edec1 (from https://pypi.org/simple/gromacs-py/), version: 1.0.0.post5
2020-05-10T10:02:07,005   Found link https://files.pythonhosted.org/packages/bf/8c/cf1548e9150167b6d5f7dc940e3cab18a83aec53aab827d3c5fe73401601/gromacs_py-1.0.1.tar.gz#sha256=3283cef19e0a6b929b2ada9a2bfd2498569b862a079e32c992d78535836331cc (from https://pypi.org/simple/gromacs-py/), version: 1.0.1
2020-05-10T10:02:07,006   Found link https://files.pythonhosted.org/packages/70/08/73aeaa8177240841aab5cffa4a4ef452545e1bf04547d5a4483352538344/gromacs_py-1.0.2.tar.gz#sha256=512f3bee4dcd19217790d2ce966f80e67c8b80306d899245d5c99fdeab14ee13 (from https://pypi.org/simple/gromacs-py/) (requires-python:>=3.0), version: 1.0.2
2020-05-10T10:02:07,007   Found link https://files.pythonhosted.org/packages/45/77/1bb7c3a946f35d6774c2708aa95161e687bae1944d23233f1af8a5f938c8/gromacs_py-1.0.3.tar.gz#sha256=f6d2e2c66ab3ca6c38e677f211ad6c531eef78c7e3a00dbb97febd91ff6804e6 (from https://pypi.org/simple/gromacs-py/) (requires-python:>=3.0), version: 1.0.3
2020-05-10T10:02:07,008   Skipping link: No binaries permitted for gromacs-py: https://files.pythonhosted.org/packages/55/df/fac3d7efdc0e9154c85bf00cf8ef849350b87cb03196a93ce8df324c6b94/gromacs_py-1.1.1-py2.py3-none-any.whl#sha256=daf5827e6f70db22a0a9d17d490407bb4fe815ebead7712e9a6b4f5b3db2f936 (from https://pypi.org/simple/gromacs-py/) (requires-python:>=3.5)
2020-05-10T10:02:07,009   Found link https://files.pythonhosted.org/packages/ea/b2/4df3300c1554b1c038d2c4b99b78a8387595823e720f1002b6b5be995b8d/gromacs_py-1.1.1.tar.gz#sha256=4c8c9be844e027637f1666e8760955df264af13482bfd43be9263065433de6ed (from https://pypi.org/simple/gromacs-py/) (requires-python:>=3.5), version: 1.1.1
2020-05-10T10:02:07,021 Given no hashes to check 1 links for project 'gromacs-py': discarding no candidates
2020-05-10T10:02:07,022 Using version 1.1.1 (newest of versions: 1.1.1)
2020-05-10T10:02:07,028 Collecting gromacs-py==1.1.1
2020-05-10T10:02:07,032   Created temporary directory: /tmp/pip-unpack-0a_a1m5_
2020-05-10T10:02:07,598   Downloading gromacs_py-1.1.1.tar.gz (4.5 MB)
2020-05-10T10:02:09,929   Added gromacs-py==1.1.1 from https://files.pythonhosted.org/packages/ea/b2/4df3300c1554b1c038d2c4b99b78a8387595823e720f1002b6b5be995b8d/gromacs_py-1.1.1.tar.gz#sha256=4c8c9be844e027637f1666e8760955df264af13482bfd43be9263065433de6ed to build tracker '/tmp/pip-req-tracker-swu20hhx'
2020-05-10T10:02:09,931     Running setup.py (path:/tmp/pip-wheel-4r82z6_x/gromacs-py/setup.py) egg_info for package gromacs-py
2020-05-10T10:02:09,932     Running command python setup.py egg_info
2020-05-10T10:02:11,735     running egg_info
2020-05-10T10:02:11,740     creating /tmp/pip-wheel-4r82z6_x/gromacs-py/pip-egg-info/gromacs_py.egg-info
2020-05-10T10:02:11,742     writing dependency_links to /tmp/pip-wheel-4r82z6_x/gromacs-py/pip-egg-info/gromacs_py.egg-info/dependency_links.txt
2020-05-10T10:02:11,744     writing requirements to /tmp/pip-wheel-4r82z6_x/gromacs-py/pip-egg-info/gromacs_py.egg-info/requires.txt
2020-05-10T10:02:11,746     writing /tmp/pip-wheel-4r82z6_x/gromacs-py/pip-egg-info/gromacs_py.egg-info/PKG-INFO
2020-05-10T10:02:11,751     writing top-level names to /tmp/pip-wheel-4r82z6_x/gromacs-py/pip-egg-info/gromacs_py.egg-info/top_level.txt
2020-05-10T10:02:11,754     writing manifest file '/tmp/pip-wheel-4r82z6_x/gromacs-py/pip-egg-info/gromacs_py.egg-info/SOURCES.txt'
2020-05-10T10:02:12,086     reading manifest file '/tmp/pip-wheel-4r82z6_x/gromacs-py/pip-egg-info/gromacs_py.egg-info/SOURCES.txt'
2020-05-10T10:02:12,088     reading manifest template 'MANIFEST.in'
2020-05-10T10:02:12,091     warning: no files found matching '*' under directory 'tests'
2020-05-10T10:02:12,092     warning: no previously-included files matching '__pycache__' found under directory '*'
2020-05-10T10:02:12,094     warning: no previously-included files matching '*.py[co]' found under directory '*'
2020-05-10T10:02:12,177     warning: no files found matching 'make.bat' under directory 'docs'
2020-05-10T10:02:12,202     warning: no files found matching '*.jpg' under directory 'docs'
2020-05-10T10:02:12,253     warning: no files found matching '*.gif' under directory 'docs'
2020-05-10T10:02:12,290     warning: manifest_maker: MANIFEST.in, line 14: 'recursive-include' expects <dir> <pattern1> <pattern2> ...

2020-05-10T10:02:12,291     warning: manifest_maker: MANIFEST.in, line 15: 'recursive-include' expects <dir> <pattern1> <pattern2> ...

2020-05-10T10:02:12,302     writing manifest file '/tmp/pip-wheel-4r82z6_x/gromacs-py/pip-egg-info/gromacs_py.egg-info/SOURCES.txt'
2020-05-10T10:02:12,434   Source in /tmp/pip-wheel-4r82z6_x/gromacs-py has version 1.1.1, which satisfies requirement gromacs-py==1.1.1 from https://files.pythonhosted.org/packages/ea/b2/4df3300c1554b1c038d2c4b99b78a8387595823e720f1002b6b5be995b8d/gromacs_py-1.1.1.tar.gz#sha256=4c8c9be844e027637f1666e8760955df264af13482bfd43be9263065433de6ed
2020-05-10T10:02:12,435   Removed gromacs-py==1.1.1 from https://files.pythonhosted.org/packages/ea/b2/4df3300c1554b1c038d2c4b99b78a8387595823e720f1002b6b5be995b8d/gromacs_py-1.1.1.tar.gz#sha256=4c8c9be844e027637f1666e8760955df264af13482bfd43be9263065433de6ed from build tracker '/tmp/pip-req-tracker-swu20hhx'
2020-05-10T10:02:12,441 Building wheels for collected packages: gromacs-py
2020-05-10T10:02:12,448   Created temporary directory: /tmp/pip-wheel-1yavjzrx
2020-05-10T10:02:12,449   Building wheel for gromacs-py (setup.py): started
2020-05-10T10:02:12,450   Destination directory: /tmp/pip-wheel-1yavjzrx
2020-05-10T10:02:12,450   Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-4r82z6_x/gromacs-py/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-4r82z6_x/gromacs-py/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-1yavjzrx
2020-05-10T10:02:14,252   running bdist_wheel
2020-05-10T10:02:14,265   running build
2020-05-10T10:02:14,265   running build_py
2020-05-10T10:02:14,561   creating build
2020-05-10T10:02:14,562   creating build/lib
2020-05-10T10:02:14,563   creating build/lib/gromacs_py
2020-05-10T10:02:14,565   copying gromacs_py/gmx.py -> build/lib/gromacs_py
2020-05-10T10:02:14,576   copying gromacs_py/__init__.py -> build/lib/gromacs_py
2020-05-10T10:02:14,580   creating build/lib/gromacs_py/tools
2020-05-10T10:02:14,581   copying gromacs_py/tools/__init__.py -> build/lib/gromacs_py/tools
2020-05-10T10:02:14,584   copying gromacs_py/tools/monitor.py -> build/lib/gromacs_py/tools
2020-05-10T10:02:14,600   creating build/lib/gromacs_py/template
2020-05-10T10:02:14,601   copying gromacs_py/template/equi_implicit_sol.mdp -> build/lib/gromacs_py/template
2020-05-10T10:02:14,605   copying gromacs_py/template/equi_charmm36_bilayer.mdp -> build/lib/gromacs_py/template
2020-05-10T10:02:14,608   copying gromacs_py/template/equi.mdp -> build/lib/gromacs_py/template
2020-05-10T10:02:14,611   copying gromacs_py/template/martini_v2.x_new-rf.mdp -> build/lib/gromacs_py/template
2020-05-10T10:02:14,614   copying gromacs_py/template/equi_vsites.mdp -> build/lib/gromacs_py/template
2020-05-10T10:02:14,617   copying gromacs_py/template/equi_charmm36.mdp -> build/lib/gromacs_py/template
2020-05-10T10:02:14,620   copying gromacs_py/template/mini.mdp -> build/lib/gromacs_py/template
2020-05-10T10:02:14,624   creating build/lib/gromacs_py/template/charmm36-jul2017.ff
2020-05-10T10:02:14,625   copying gromacs_py/template/charmm36-jul2017.ff/ffnonbonded.itp -> build/lib/gromacs_py/template/charmm36-jul2017.ff
2020-05-10T10:02:14,709   copying gromacs_py/template/charmm36-jul2017.ff/ions.itp -> build/lib/gromacs_py/template/charmm36-jul2017.ff
2020-05-10T10:02:14,715   copying gromacs_py/template/charmm36-jul2017.ff/watermodels.dat -> build/lib/gromacs_py/template/charmm36-jul2017.ff
2020-05-10T10:02:14,720   copying gromacs_py/template/charmm36-jul2017.ff/merged.arn -> build/lib/gromacs_py/template/charmm36-jul2017.ff
2020-05-10T10:02:14,723   copying gromacs_py/template/charmm36-jul2017.ff/forcefield.doc -> build/lib/gromacs_py/template/charmm36-jul2017.ff
2020-05-10T10:02:14,728   copying gromacs_py/template/charmm36-jul2017.ff/merged.hdb -> build/lib/gromacs_py/template/charmm36-jul2017.ff
2020-05-10T10:02:14,731   copying gromacs_py/template/charmm36-jul2017.ff/cmap.itp -> build/lib/gromacs_py/template/charmm36-jul2017.ff
2020-05-10T10:02:14,739   copying gromacs_py/template/charmm36-jul2017.ff/ffbonded.itp -> build/lib/gromacs_py/template/charmm36-jul2017.ff
2020-05-10T10:02:14,792   copying gromacs_py/template/charmm36-jul2017.ff/merged.vsd -> build/lib/gromacs_py/template/charmm36-jul2017.ff
2020-05-10T10:02:14,796   copying gromacs_py/template/charmm36-jul2017.ff/spc.itp -> build/lib/gromacs_py/template/charmm36-jul2017.ff
2020-05-10T10:02:14,799   copying gromacs_py/template/charmm36-jul2017.ff/tip3p.itp -> build/lib/gromacs_py/template/charmm36-jul2017.ff
2020-05-10T10:02:14,802   copying gromacs_py/template/charmm36-jul2017.ff/merged.r2b -> build/lib/gromacs_py/template/charmm36-jul2017.ff
2020-05-10T10:02:14,805   copying gromacs_py/template/charmm36-jul2017.ff/old_c36_cmap.itp -> build/lib/gromacs_py/template/charmm36-jul2017.ff
2020-05-10T10:02:14,811   copying gromacs_py/template/charmm36-jul2017.ff/gb.itp -> build/lib/gromacs_py/template/charmm36-jul2017.ff
2020-05-10T10:02:14,815   copying gromacs_py/template/charmm36-jul2017.ff/tip4p.itp -> build/lib/gromacs_py/template/charmm36-jul2017.ff
2020-05-10T10:02:14,819   copying gromacs_py/template/charmm36-jul2017.ff/atomtypes.atp -> build/lib/gromacs_py/template/charmm36-jul2017.ff
2020-05-10T10:02:14,824   copying gromacs_py/template/charmm36-jul2017.ff/spce.itp -> build/lib/gromacs_py/template/charmm36-jul2017.ff
2020-05-10T10:02:14,828   copying gromacs_py/template/charmm36-jul2017.ff/nbfix.itp -> build/lib/gromacs_py/template/charmm36-jul2017.ff
2020-05-10T10:02:14,832   copying gromacs_py/template/charmm36-jul2017.ff/merged.rtp -> build/lib/gromacs_py/template/charmm36-jul2017.ff
2020-05-10T10:02:14,936   copying gromacs_py/template/charmm36-jul2017.ff/merged.n.tdb -> build/lib/gromacs_py/template/charmm36-jul2017.ff
2020-05-10T10:02:14,942   copying gromacs_py/template/charmm36-jul2017.ff/forcefield.itp -> build/lib/gromacs_py/template/charmm36-jul2017.ff
2020-05-10T10:02:14,948   copying gromacs_py/template/charmm36-jul2017.ff/merged.c.tdb -> build/lib/gromacs_py/template/charmm36-jul2017.ff
2020-05-10T10:02:14,954   creating build/lib/gromacs_py/test_files
2020-05-10T10:02:14,958   copying gromacs_py/test_files/4n1m.pdb -> build/lib/gromacs_py/test_files
2020-05-10T10:02:14,985   copying gromacs_py/test_files/1rxz.pdb -> build/lib/gromacs_py/test_files
2020-05-10T10:02:15,004   copying gromacs_py/test_files/1jd4.pdb -> build/lib/gromacs_py/test_files
2020-05-10T10:02:15,017   copying gromacs_py/test_files/1AWR-055_bestene1-mc.pdb -> build/lib/gromacs_py/test_files
2020-05-10T10:02:15,025   copying gromacs_py/test_files/5vav.pdb -> build/lib/gromacs_py/test_files
2020-05-10T10:02:15,052   copying gromacs_py/test_files/1dpx.pdb -> build/lib/gromacs_py/test_files
2020-05-10T10:02:15,062   copying gromacs_py/test_files/1y0m.pdb -> build/lib/gromacs_py/test_files
2020-05-10T10:02:15,074   copying gromacs_py/test_files/2rri.pdb -> build/lib/gromacs_py/test_files
2020-05-10T10:02:15,121   copying gromacs_py/test_files/volume.xvg -> build/lib/gromacs_py/test_files
2020-05-10T10:02:15,129   running build_scripts
2020-05-10T10:02:15,130   creating build/scripts-3.5
2020-05-10T10:02:15,132   copying and adjusting bin/extend.py -> build/scripts-3.5
2020-05-10T10:02:15,135   copying and adjusting bin/create_peptide.py -> build/scripts-3.5
2020-05-10T10:02:15,137   copying and adjusting bin/create_top.py -> build/scripts-3.5
2020-05-10T10:02:15,140   copying and adjusting bin/prepare_prot.py -> build/scripts-3.5
2020-05-10T10:02:15,143   copying and adjusting bin/insert_mol_no_vmd.py -> build/scripts-3.5
2020-05-10T10:02:15,146   copying and adjusting bin/minimize_pdb.py -> build/scripts-3.5
2020-05-10T10:02:15,148   copying and adjusting bin/solvate_ions.py -> build/scripts-3.5
2020-05-10T10:02:15,151   copying and adjusting bin/prepare_prot_topo_edit.py -> build/scripts-3.5
2020-05-10T10:02:15,154   copying and adjusting bin/production.py -> build/scripts-3.5
2020-05-10T10:02:15,156   copying and adjusting bin/test_gromacs_py.py -> build/scripts-3.5
2020-05-10T10:02:15,159   copying and adjusting bin/top_em_equi_3_step_prod.py -> build/scripts-3.5
2020-05-10T10:02:15,161   changing mode of build/scripts-3.5/extend.py from 644 to 755
2020-05-10T10:02:15,161   changing mode of build/scripts-3.5/create_peptide.py from 644 to 755
2020-05-10T10:02:15,162   changing mode of build/scripts-3.5/create_top.py from 644 to 755
2020-05-10T10:02:15,162   changing mode of build/scripts-3.5/prepare_prot.py from 644 to 755
2020-05-10T10:02:15,163   changing mode of build/scripts-3.5/insert_mol_no_vmd.py from 644 to 755
2020-05-10T10:02:15,164   changing mode of build/scripts-3.5/minimize_pdb.py from 644 to 755
2020-05-10T10:02:15,164   changing mode of build/scripts-3.5/solvate_ions.py from 644 to 755
2020-05-10T10:02:15,165   changing mode of build/scripts-3.5/prepare_prot_topo_edit.py from 644 to 755
2020-05-10T10:02:15,166   changing mode of build/scripts-3.5/production.py from 644 to 755
2020-05-10T10:02:15,166   changing mode of build/scripts-3.5/test_gromacs_py.py from 644 to 755
2020-05-10T10:02:15,167   changing mode of build/scripts-3.5/top_em_equi_3_step_prod.py from 644 to 755
2020-05-10T10:02:15,171   installing to build/bdist.linux-armv7l/wheel
2020-05-10T10:02:15,172   running install
2020-05-10T10:02:15,173   running install_lib
2020-05-10T10:02:15,180   creating build/bdist.linux-armv7l
2020-05-10T10:02:15,180   creating build/bdist.linux-armv7l/wheel
2020-05-10T10:02:15,183   creating build/bdist.linux-armv7l/wheel/gromacs_py
2020-05-10T10:02:15,185   creating build/bdist.linux-armv7l/wheel/gromacs_py/tools
2020-05-10T10:02:15,187   copying build/lib/gromacs_py/tools/__init__.py -> build/bdist.linux-armv7l/wheel/gromacs_py/tools
2020-05-10T10:02:15,190   copying build/lib/gromacs_py/tools/monitor.py -> build/bdist.linux-armv7l/wheel/gromacs_py/tools
2020-05-10T10:02:15,194   copying build/lib/gromacs_py/gmx.py -> build/bdist.linux-armv7l/wheel/gromacs_py
2020-05-10T10:02:15,205   copying build/lib/gromacs_py/__init__.py -> build/bdist.linux-armv7l/wheel/gromacs_py
2020-05-10T10:02:15,209   creating build/bdist.linux-armv7l/wheel/gromacs_py/test_files
2020-05-10T10:02:15,211   copying build/lib/gromacs_py/test_files/4n1m.pdb -> build/bdist.linux-armv7l/wheel/gromacs_py/test_files
2020-05-10T10:02:15,238   copying build/lib/gromacs_py/test_files/1rxz.pdb -> build/bdist.linux-armv7l/wheel/gromacs_py/test_files
2020-05-10T10:02:15,251   copying build/lib/gromacs_py/test_files/1jd4.pdb -> build/bdist.linux-armv7l/wheel/gromacs_py/test_files
2020-05-10T10:02:15,262   copying build/lib/gromacs_py/test_files/1AWR-055_bestene1-mc.pdb -> build/bdist.linux-armv7l/wheel/gromacs_py/test_files
2020-05-10T10:02:15,269   copying build/lib/gromacs_py/test_files/volume.xvg -> build/bdist.linux-armv7l/wheel/gromacs_py/test_files
2020-05-10T10:02:15,274   copying build/lib/gromacs_py/test_files/5vav.pdb -> build/bdist.linux-armv7l/wheel/gromacs_py/test_files
2020-05-10T10:02:15,297   copying build/lib/gromacs_py/test_files/1dpx.pdb -> build/bdist.linux-armv7l/wheel/gromacs_py/test_files
2020-05-10T10:02:15,306   copying build/lib/gromacs_py/test_files/1y0m.pdb -> build/bdist.linux-armv7l/wheel/gromacs_py/test_files
2020-05-10T10:02:15,317   copying build/lib/gromacs_py/test_files/2rri.pdb -> build/bdist.linux-armv7l/wheel/gromacs_py/test_files
2020-05-10T10:02:15,360   creating build/bdist.linux-armv7l/wheel/gromacs_py/template
2020-05-10T10:02:15,361   copying build/lib/gromacs_py/template/equi_implicit_sol.mdp -> build/bdist.linux-armv7l/wheel/gromacs_py/template
2020-05-10T10:02:15,365   copying build/lib/gromacs_py/template/equi_charmm36_bilayer.mdp -> build/bdist.linux-armv7l/wheel/gromacs_py/template
2020-05-10T10:02:15,368   copying build/lib/gromacs_py/template/equi.mdp -> build/bdist.linux-armv7l/wheel/gromacs_py/template
2020-05-10T10:02:15,371   copying build/lib/gromacs_py/template/martini_v2.x_new-rf.mdp -> build/bdist.linux-armv7l/wheel/gromacs_py/template
2020-05-10T10:02:15,376   copying build/lib/gromacs_py/template/equi_vsites.mdp -> build/bdist.linux-armv7l/wheel/gromacs_py/template
2020-05-10T10:02:15,380   copying build/lib/gromacs_py/template/equi_charmm36.mdp -> build/bdist.linux-armv7l/wheel/gromacs_py/template
2020-05-10T10:02:15,386   creating build/bdist.linux-armv7l/wheel/gromacs_py/template/charmm36-jul2017.ff
2020-05-10T10:02:15,388   copying build/lib/gromacs_py/template/charmm36-jul2017.ff/ffnonbonded.itp -> build/bdist.linux-armv7l/wheel/gromacs_py/template/charmm36-jul2017.ff
2020-05-10T10:02:15,474   copying build/lib/gromacs_py/template/charmm36-jul2017.ff/ions.itp -> build/bdist.linux-armv7l/wheel/gromacs_py/template/charmm36-jul2017.ff
2020-05-10T10:02:15,477   copying build/lib/gromacs_py/template/charmm36-jul2017.ff/watermodels.dat -> build/bdist.linux-armv7l/wheel/gromacs_py/template/charmm36-jul2017.ff
2020-05-10T10:02:15,480   copying build/lib/gromacs_py/template/charmm36-jul2017.ff/merged.arn -> build/bdist.linux-armv7l/wheel/gromacs_py/template/charmm36-jul2017.ff
2020-05-10T10:02:15,483   copying build/lib/gromacs_py/template/charmm36-jul2017.ff/forcefield.doc -> build/bdist.linux-armv7l/wheel/gromacs_py/template/charmm36-jul2017.ff
2020-05-10T10:02:15,487   copying build/lib/gromacs_py/template/charmm36-jul2017.ff/merged.hdb -> build/bdist.linux-armv7l/wheel/gromacs_py/template/charmm36-jul2017.ff
2020-05-10T10:02:15,490   copying build/lib/gromacs_py/template/charmm36-jul2017.ff/cmap.itp -> build/bdist.linux-armv7l/wheel/gromacs_py/template/charmm36-jul2017.ff
2020-05-10T10:02:15,499   copying build/lib/gromacs_py/template/charmm36-jul2017.ff/ffbonded.itp -> build/bdist.linux-armv7l/wheel/gromacs_py/template/charmm36-jul2017.ff
2020-05-10T10:02:15,562   copying build/lib/gromacs_py/template/charmm36-jul2017.ff/merged.vsd -> build/bdist.linux-armv7l/wheel/gromacs_py/template/charmm36-jul2017.ff
2020-05-10T10:02:15,567   copying build/lib/gromacs_py/template/charmm36-jul2017.ff/spc.itp -> build/bdist.linux-armv7l/wheel/gromacs_py/template/charmm36-jul2017.ff
2020-05-10T10:02:15,571   copying build/lib/gromacs_py/template/charmm36-jul2017.ff/tip3p.itp -> build/bdist.linux-armv7l/wheel/gromacs_py/template/charmm36-jul2017.ff
2020-05-10T10:02:15,576   copying build/lib/gromacs_py/template/charmm36-jul2017.ff/merged.r2b -> build/bdist.linux-armv7l/wheel/gromacs_py/template/charmm36-jul2017.ff
2020-05-10T10:02:15,580   copying build/lib/gromacs_py/template/charmm36-jul2017.ff/old_c36_cmap.itp -> build/bdist.linux-armv7l/wheel/gromacs_py/template/charmm36-jul2017.ff
2020-05-10T10:02:15,588   copying build/lib/gromacs_py/template/charmm36-jul2017.ff/gb.itp -> build/bdist.linux-armv7l/wheel/gromacs_py/template/charmm36-jul2017.ff
2020-05-10T10:02:15,593   copying build/lib/gromacs_py/template/charmm36-jul2017.ff/tip4p.itp -> build/bdist.linux-armv7l/wheel/gromacs_py/template/charmm36-jul2017.ff
2020-05-10T10:02:15,598   copying build/lib/gromacs_py/template/charmm36-jul2017.ff/atomtypes.atp -> build/bdist.linux-armv7l/wheel/gromacs_py/template/charmm36-jul2017.ff
2020-05-10T10:02:15,604   copying build/lib/gromacs_py/template/charmm36-jul2017.ff/spce.itp -> build/bdist.linux-armv7l/wheel/gromacs_py/template/charmm36-jul2017.ff
2020-05-10T10:02:15,610   copying build/lib/gromacs_py/template/charmm36-jul2017.ff/nbfix.itp -> build/bdist.linux-armv7l/wheel/gromacs_py/template/charmm36-jul2017.ff
2020-05-10T10:02:15,615   copying build/lib/gromacs_py/template/charmm36-jul2017.ff/merged.rtp -> build/bdist.linux-armv7l/wheel/gromacs_py/template/charmm36-jul2017.ff
2020-05-10T10:02:15,718   copying build/lib/gromacs_py/template/charmm36-jul2017.ff/merged.n.tdb -> build/bdist.linux-armv7l/wheel/gromacs_py/template/charmm36-jul2017.ff
2020-05-10T10:02:15,724   copying build/lib/gromacs_py/template/charmm36-jul2017.ff/forcefield.itp -> build/bdist.linux-armv7l/wheel/gromacs_py/template/charmm36-jul2017.ff
2020-05-10T10:02:15,730   copying build/lib/gromacs_py/template/charmm36-jul2017.ff/merged.c.tdb -> build/bdist.linux-armv7l/wheel/gromacs_py/template/charmm36-jul2017.ff
2020-05-10T10:02:15,736   copying build/lib/gromacs_py/template/mini.mdp -> build/bdist.linux-armv7l/wheel/gromacs_py/template
2020-05-10T10:02:15,741   running install_egg_info
2020-05-10T10:02:15,779   running egg_info
2020-05-10T10:02:15,781   writing dependency_links to gromacs_py.egg-info/dependency_links.txt
2020-05-10T10:02:15,784   writing top-level names to gromacs_py.egg-info/top_level.txt
2020-05-10T10:02:15,786   writing requirements to gromacs_py.egg-info/requires.txt
2020-05-10T10:02:15,789   writing gromacs_py.egg-info/PKG-INFO
2020-05-10T10:02:15,801   reading manifest file 'gromacs_py.egg-info/SOURCES.txt'
2020-05-10T10:02:15,818   reading manifest template 'MANIFEST.in'
2020-05-10T10:02:15,822   warning: no files found matching '*' under directory 'tests'
2020-05-10T10:02:15,825   warning: no previously-included files matching '__pycache__' found under directory '*'
2020-05-10T10:02:15,827   warning: no previously-included files matching '*.py[co]' found under directory '*'
2020-05-10T10:02:15,896   warning: no files found matching 'make.bat' under directory 'docs'
2020-05-10T10:02:15,922   warning: no files found matching '*.jpg' under directory 'docs'
2020-05-10T10:02:15,974   warning: no files found matching '*.gif' under directory 'docs'
2020-05-10T10:02:16,011   warning: manifest_maker: MANIFEST.in, line 14: 'recursive-include' expects <dir> <pattern1> <pattern2> ...

2020-05-10T10:02:16,012   warning: manifest_maker: MANIFEST.in, line 15: 'recursive-include' expects <dir> <pattern1> <pattern2> ...

2020-05-10T10:02:16,027   writing manifest file 'gromacs_py.egg-info/SOURCES.txt'
2020-05-10T10:02:16,029   Copying gromacs_py.egg-info to build/bdist.linux-armv7l/wheel/gromacs_py-1.1.1-py3.5.egg-info
2020-05-10T10:02:16,047   running install_scripts
2020-05-10T10:02:16,155   creating build/bdist.linux-armv7l/wheel/gromacs_py-1.1.1.data
2020-05-10T10:02:16,156   creating build/bdist.linux-armv7l/wheel/gromacs_py-1.1.1.data/scripts
2020-05-10T10:02:16,158   copying build/scripts-3.5/top_em_equi_3_step_prod.py -> build/bdist.linux-armv7l/wheel/gromacs_py-1.1.1.data/scripts
2020-05-10T10:02:16,161   copying build/scripts-3.5/prepare_prot_topo_edit.py -> build/bdist.linux-armv7l/wheel/gromacs_py-1.1.1.data/scripts
2020-05-10T10:02:16,165   copying build/scripts-3.5/minimize_pdb.py -> build/bdist.linux-armv7l/wheel/gromacs_py-1.1.1.data/scripts
2020-05-10T10:02:16,168   copying build/scripts-3.5/create_peptide.py -> build/bdist.linux-armv7l/wheel/gromacs_py-1.1.1.data/scripts
2020-05-10T10:02:16,171   copying build/scripts-3.5/test_gromacs_py.py -> build/bdist.linux-armv7l/wheel/gromacs_py-1.1.1.data/scripts
2020-05-10T10:02:16,173   copying build/scripts-3.5/prepare_prot.py -> build/bdist.linux-armv7l/wheel/gromacs_py-1.1.1.data/scripts
2020-05-10T10:02:16,177   copying build/scripts-3.5/extend.py -> build/bdist.linux-armv7l/wheel/gromacs_py-1.1.1.data/scripts
2020-05-10T10:02:16,180   copying build/scripts-3.5/solvate_ions.py -> build/bdist.linux-armv7l/wheel/gromacs_py-1.1.1.data/scripts
2020-05-10T10:02:16,183   copying build/scripts-3.5/create_top.py -> build/bdist.linux-armv7l/wheel/gromacs_py-1.1.1.data/scripts
2020-05-10T10:02:16,186   copying build/scripts-3.5/production.py -> build/bdist.linux-armv7l/wheel/gromacs_py-1.1.1.data/scripts
2020-05-10T10:02:16,189   copying build/scripts-3.5/insert_mol_no_vmd.py -> build/bdist.linux-armv7l/wheel/gromacs_py-1.1.1.data/scripts
2020-05-10T10:02:16,192   changing mode of build/bdist.linux-armv7l/wheel/gromacs_py-1.1.1.data/scripts/top_em_equi_3_step_prod.py to 755
2020-05-10T10:02:16,193   changing mode of build/bdist.linux-armv7l/wheel/gromacs_py-1.1.1.data/scripts/prepare_prot_topo_edit.py to 755
2020-05-10T10:02:16,193   changing mode of build/bdist.linux-armv7l/wheel/gromacs_py-1.1.1.data/scripts/minimize_pdb.py to 755
2020-05-10T10:02:16,194   changing mode of build/bdist.linux-armv7l/wheel/gromacs_py-1.1.1.data/scripts/create_peptide.py to 755
2020-05-10T10:02:16,195   changing mode of build/bdist.linux-armv7l/wheel/gromacs_py-1.1.1.data/scripts/test_gromacs_py.py to 755
2020-05-10T10:02:16,195   changing mode of build/bdist.linux-armv7l/wheel/gromacs_py-1.1.1.data/scripts/prepare_prot.py to 755
2020-05-10T10:02:16,196   changing mode of build/bdist.linux-armv7l/wheel/gromacs_py-1.1.1.data/scripts/extend.py to 755
2020-05-10T10:02:16,196   changing mode of build/bdist.linux-armv7l/wheel/gromacs_py-1.1.1.data/scripts/solvate_ions.py to 755
2020-05-10T10:02:16,197   changing mode of build/bdist.linux-armv7l/wheel/gromacs_py-1.1.1.data/scripts/create_top.py to 755
2020-05-10T10:02:16,197   changing mode of build/bdist.linux-armv7l/wheel/gromacs_py-1.1.1.data/scripts/production.py to 755
2020-05-10T10:02:16,198   changing mode of build/bdist.linux-armv7l/wheel/gromacs_py-1.1.1.data/scripts/insert_mol_no_vmd.py to 755
2020-05-10T10:02:16,254   creating build/bdist.linux-armv7l/wheel/gromacs_py-1.1.1.dist-info/WHEEL
2020-05-10T10:02:17,961   Building wheel for gromacs-py (setup.py): finished with status 'done'
2020-05-10T10:02:17,981   Created wheel for gromacs-py: filename=gromacs_py-1.1.1-py2.py3-none-any.whl size=1177892 sha256=50b2149ce525c2d9ea6b409e3c7ad86c25fd0e9792fdcb23df8495c7ea3b882c
2020-05-10T10:02:17,981   Stored in directory: /tmp/pip-ephem-wheel-cache-hha5ch_7/wheels/db/f2/fa/b92bb4d88a5979193d9968578ded511c78e6f1641322e1d37d
2020-05-10T10:02:17,984 Successfully built gromacs-py
2020-05-10T10:02:18,328 Cleaning up...
2020-05-10T10:02:18,329   Removing source in /tmp/pip-wheel-4r82z6_x/gromacs-py
2020-05-10T10:02:18,465 Removed build tracker: '/tmp/pip-req-tracker-swu20hhx'