2020-05-13T18:55:15,190 Created temporary directory: /tmp/pip-ephem-wheel-cache-tg6z8bwl
2020-05-13T18:55:15,194 Created temporary directory: /tmp/pip-req-tracker-veyvivmi
2020-05-13T18:55:15,195 Initialized build tracking at /tmp/pip-req-tracker-veyvivmi
2020-05-13T18:55:15,196 Created build tracker: /tmp/pip-req-tracker-veyvivmi
2020-05-13T18:55:15,196 Entered build tracker: /tmp/pip-req-tracker-veyvivmi
2020-05-13T18:55:15,197 Created temporary directory: /tmp/pip-wheel-s7f5ujwc
2020-05-13T18:55:15,214 1 location(s) to search for versions of bacphlip:
2020-05-13T18:55:15,214 * https://pypi.org/simple/bacphlip/
2020-05-13T18:55:15,215 Fetching project page and analyzing links: https://pypi.org/simple/bacphlip/
2020-05-13T18:55:15,215 Getting page https://pypi.org/simple/bacphlip/
2020-05-13T18:55:15,218 Found index url https://pypi.org/simple
2020-05-13T18:55:15,419   Found link https://files.pythonhosted.org/packages/2b/74/5e998f583cf6561adca649d8d848c84a9cbf3d0ae7cbb67e729723f4e341/bacphlip-0.9.tar.gz#sha256=9ada32c22ba329e76ddbabefed42fc7d45c307e73e5ec6d8e534a1b4dfa10274 (from https://pypi.org/simple/bacphlip/) (requires-python:>=3.6), version: 0.9
2020-05-13T18:55:15,420   Found link https://files.pythonhosted.org/packages/ae/15/8d3cfb9894d07d399d0f4cfcc24852dee5785545dcc49a4166addf2eec10/bacphlip-0.9.1.tar.gz#sha256=4581c520f2d0c549b2a838589a05737d4a1f4bb30ec3df895d2aaaab8a2192ca (from https://pypi.org/simple/bacphlip/) (requires-python:>=3.6), version: 0.9.1
2020-05-13T18:55:15,421   Found link https://files.pythonhosted.org/packages/63/05/3017fa934dda0aa49c731e5b3ccb8e1e9d5186f8b294d589a61872886bd1/bacphlip-0.9.2.tar.gz#sha256=8071422edfd213218b91271cccd612013e559eb15024e4234e55c96fa5b9eecf (from https://pypi.org/simple/bacphlip/) (requires-python:>=3.6), version: 0.9.2
2020-05-13T18:55:15,429 Given no hashes to check 1 links for project 'bacphlip': discarding no candidates
2020-05-13T18:55:15,430 Using version 0.9.2 (newest of versions: 0.9.2)
2020-05-13T18:55:15,435 Collecting bacphlip==0.9.2
2020-05-13T18:55:15,439   Created temporary directory: /tmp/pip-unpack-0_ug3to2
2020-05-13T18:55:17,255   Downloading bacphlip-0.9.2.tar.gz (10.2 MB)
2020-05-13T18:55:27,444   Added bacphlip==0.9.2 from https://files.pythonhosted.org/packages/63/05/3017fa934dda0aa49c731e5b3ccb8e1e9d5186f8b294d589a61872886bd1/bacphlip-0.9.2.tar.gz#sha256=8071422edfd213218b91271cccd612013e559eb15024e4234e55c96fa5b9eecf to build tracker '/tmp/pip-req-tracker-veyvivmi'
2020-05-13T18:55:27,446     Running setup.py (path:/tmp/pip-wheel-s7f5ujwc/bacphlip/setup.py) egg_info for package bacphlip
2020-05-13T18:55:27,447     Created temporary directory: /tmp/pip-pip-egg-info-7sh0e9nl
2020-05-13T18:55:27,448     Running command python setup.py egg_info
2020-05-13T18:55:29,319     running egg_info
2020-05-13T18:55:29,323     creating /tmp/pip-pip-egg-info-7sh0e9nl/bacphlip.egg-info
2020-05-13T18:55:29,325     writing /tmp/pip-pip-egg-info-7sh0e9nl/bacphlip.egg-info/PKG-INFO
2020-05-13T18:55:29,330     writing dependency_links to /tmp/pip-pip-egg-info-7sh0e9nl/bacphlip.egg-info/dependency_links.txt
2020-05-13T18:55:29,333     writing entry points to /tmp/pip-pip-egg-info-7sh0e9nl/bacphlip.egg-info/entry_points.txt
2020-05-13T18:55:29,336     writing requirements to /tmp/pip-pip-egg-info-7sh0e9nl/bacphlip.egg-info/requires.txt
2020-05-13T18:55:29,338     writing top-level names to /tmp/pip-pip-egg-info-7sh0e9nl/bacphlip.egg-info/top_level.txt
2020-05-13T18:55:29,342     writing manifest file '/tmp/pip-pip-egg-info-7sh0e9nl/bacphlip.egg-info/SOURCES.txt'
2020-05-13T18:55:29,632     reading manifest file '/tmp/pip-pip-egg-info-7sh0e9nl/bacphlip.egg-info/SOURCES.txt'
2020-05-13T18:55:29,635     reading manifest template 'MANIFEST.in'
2020-05-13T18:55:29,653     writing manifest file '/tmp/pip-pip-egg-info-7sh0e9nl/bacphlip.egg-info/SOURCES.txt'
2020-05-13T18:55:29,771   Source in /tmp/pip-wheel-s7f5ujwc/bacphlip has version 0.9.2, which satisfies requirement bacphlip==0.9.2 from https://files.pythonhosted.org/packages/63/05/3017fa934dda0aa49c731e5b3ccb8e1e9d5186f8b294d589a61872886bd1/bacphlip-0.9.2.tar.gz#sha256=8071422edfd213218b91271cccd612013e559eb15024e4234e55c96fa5b9eecf
2020-05-13T18:55:29,773   Removed bacphlip==0.9.2 from https://files.pythonhosted.org/packages/63/05/3017fa934dda0aa49c731e5b3ccb8e1e9d5186f8b294d589a61872886bd1/bacphlip-0.9.2.tar.gz#sha256=8071422edfd213218b91271cccd612013e559eb15024e4234e55c96fa5b9eecf from build tracker '/tmp/pip-req-tracker-veyvivmi'
2020-05-13T18:55:29,777 Building wheels for collected packages: bacphlip
2020-05-13T18:55:29,786   Created temporary directory: /tmp/pip-wheel-y_dlt57c
2020-05-13T18:55:29,787   Building wheel for bacphlip (setup.py): started
2020-05-13T18:55:29,788   Destination directory: /tmp/pip-wheel-y_dlt57c
2020-05-13T18:55:29,788   Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-s7f5ujwc/bacphlip/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-s7f5ujwc/bacphlip/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-y_dlt57c
2020-05-13T18:55:31,617   running bdist_wheel
2020-05-13T18:55:31,630   running build
2020-05-13T18:55:31,631   running build_py
2020-05-13T18:55:31,906   creating build
2020-05-13T18:55:31,907   creating build/lib
2020-05-13T18:55:31,909   creating build/lib/bacphlip
2020-05-13T18:55:31,912   copying bacphlip/__init__.py -> build/lib/bacphlip
2020-05-13T18:55:31,916   copying bacphlip/__main__.py -> build/lib/bacphlip
2020-05-13T18:55:31,921   copying bacphlip/bacphlip.py -> build/lib/bacphlip
2020-05-13T18:55:31,926   running egg_info
2020-05-13T18:55:31,959   writing bacphlip.egg-info/PKG-INFO
2020-05-13T18:55:31,964   writing dependency_links to bacphlip.egg-info/dependency_links.txt
2020-05-13T18:55:31,968   writing entry points to bacphlip.egg-info/entry_points.txt
2020-05-13T18:55:31,970   writing requirements to bacphlip.egg-info/requires.txt
2020-05-13T18:55:31,973   writing top-level names to bacphlip.egg-info/top_level.txt
2020-05-13T18:55:31,982   reading manifest file 'bacphlip.egg-info/SOURCES.txt'
2020-05-13T18:55:31,987   reading manifest template 'MANIFEST.in'
2020-05-13T18:55:32,005   writing manifest file 'bacphlip.egg-info/SOURCES.txt'
2020-05-13T18:55:32,010   creating build/lib/bacphlip/data
2020-05-13T18:55:32,011   copying bacphlip/data/prot_models.hmm -> build/lib/bacphlip/data
2020-05-13T18:55:37,509   copying bacphlip/data/rf_best.joblib -> build/lib/bacphlip/data
2020-05-13T18:55:37,603   creating build/lib/bacphlip/data/example_data
2020-05-13T18:55:37,606   copying bacphlip/data/example_data/genome_example.fasta -> build/lib/bacphlip/data/example_data
2020-05-13T18:55:37,617   copying bacphlip/data/example_data/genome_example.fasta.6frame -> build/lib/bacphlip/data/example_data
2020-05-13T18:55:37,628   copying bacphlip/data/example_data/genome_example.fasta.bacphlip -> build/lib/bacphlip/data/example_data
2020-05-13T18:55:37,634   copying bacphlip/data/example_data/genome_example.fasta.hmmsearch -> build/lib/bacphlip/data/example_data
2020-05-13T18:55:37,665   copying bacphlip/data/example_data/genome_example.fasta.hmmsearch.tsv -> build/lib/bacphlip/data/example_data
2020-05-13T18:55:37,681   installing to build/bdist.linux-armv7l/wheel
2020-05-13T18:55:37,682   running install
2020-05-13T18:55:37,685   running install_lib
2020-05-13T18:55:37,695   creating build/bdist.linux-armv7l
2020-05-13T18:55:37,696   creating build/bdist.linux-armv7l/wheel
2020-05-13T18:55:37,700   creating build/bdist.linux-armv7l/wheel/bacphlip
2020-05-13T18:55:37,702   copying build/lib/bacphlip/__init__.py -> build/bdist.linux-armv7l/wheel/bacphlip
2020-05-13T18:55:37,706   copying build/lib/bacphlip/__main__.py -> build/bdist.linux-armv7l/wheel/bacphlip
2020-05-13T18:55:37,712   creating build/bdist.linux-armv7l/wheel/bacphlip/data
2020-05-13T18:55:37,713   copying build/lib/bacphlip/data/rf_best.joblib -> build/bdist.linux-armv7l/wheel/bacphlip/data
2020-05-13T18:55:37,811   creating build/bdist.linux-armv7l/wheel/bacphlip/data/example_data
2020-05-13T18:55:37,813   copying build/lib/bacphlip/data/example_data/genome_example.fasta.hmmsearch.tsv -> build/bdist.linux-armv7l/wheel/bacphlip/data/example_data
2020-05-13T18:55:37,819   copying build/lib/bacphlip/data/example_data/genome_example.fasta.6frame -> build/bdist.linux-armv7l/wheel/bacphlip/data/example_data
2020-05-13T18:55:37,829   copying build/lib/bacphlip/data/example_data/genome_example.fasta.hmmsearch -> build/bdist.linux-armv7l/wheel/bacphlip/data/example_data
2020-05-13T18:55:37,860   copying build/lib/bacphlip/data/example_data/genome_example.fasta.bacphlip -> build/bdist.linux-armv7l/wheel/bacphlip/data/example_data
2020-05-13T18:55:37,865   copying build/lib/bacphlip/data/example_data/genome_example.fasta -> build/bdist.linux-armv7l/wheel/bacphlip/data/example_data
2020-05-13T18:55:37,875   copying build/lib/bacphlip/data/prot_models.hmm -> build/bdist.linux-armv7l/wheel/bacphlip/data
2020-05-13T18:55:43,406   copying build/lib/bacphlip/bacphlip.py -> build/bdist.linux-armv7l/wheel/bacphlip
2020-05-13T18:55:43,411   running install_egg_info
2020-05-13T18:55:43,426   Copying bacphlip.egg-info to build/bdist.linux-armv7l/wheel/bacphlip-0.9.2-py3.7.egg-info
2020-05-13T18:55:43,456   running install_scripts
2020-05-13T18:55:43,611   adding license file "LICENSE.txt" (matched pattern "LICEN[CS]E*")
2020-05-13T18:55:43,628   creating build/bdist.linux-armv7l/wheel/bacphlip-0.9.2.dist-info/WHEEL
2020-05-13T18:55:43,634   creating '/tmp/pip-wheel-y_dlt57c/bacphlip-0.9.2-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2020-05-13T18:55:43,639   adding 'bacphlip/__init__.py'
2020-05-13T18:55:43,642   adding 'bacphlip/__main__.py'
2020-05-13T18:55:43,646   adding 'bacphlip/bacphlip.py'
2020-05-13T18:55:57,736   adding 'bacphlip/data/prot_models.hmm'
2020-05-13T18:55:58,596   adding 'bacphlip/data/rf_best.joblib'
2020-05-13T18:55:58,637   adding 'bacphlip/data/example_data/genome_example.fasta'
2020-05-13T18:55:58,649   adding 'bacphlip/data/example_data/genome_example.fasta.6frame'
2020-05-13T18:55:58,652   adding 'bacphlip/data/example_data/genome_example.fasta.bacphlip'
2020-05-13T18:55:58,670   adding 'bacphlip/data/example_data/genome_example.fasta.hmmsearch'
2020-05-13T18:55:58,676   adding 'bacphlip/data/example_data/genome_example.fasta.hmmsearch.tsv'
2020-05-13T18:55:58,680   adding 'bacphlip-0.9.2.dist-info/LICENSE.txt'
2020-05-13T18:55:58,683   adding 'bacphlip-0.9.2.dist-info/METADATA'
2020-05-13T18:55:58,685   adding 'bacphlip-0.9.2.dist-info/WHEEL'
2020-05-13T18:55:58,687   adding 'bacphlip-0.9.2.dist-info/entry_points.txt'
2020-05-13T18:55:58,688   adding 'bacphlip-0.9.2.dist-info/top_level.txt'
2020-05-13T18:55:58,689   adding 'bacphlip-0.9.2.dist-info/RECORD'
2020-05-13T18:55:59,591   removing build/bdist.linux-armv7l/wheel
2020-05-13T18:55:59,787   Building wheel for bacphlip (setup.py): finished with status 'done'
2020-05-13T18:55:59,939   Created wheel for bacphlip: filename=bacphlip-0.9.2-py3-none-any.whl size=10357966 sha256=029615376ce303a0f4fa008abfe46d2bf4c9d72724ce2764044cbecf5220fab9
2020-05-13T18:55:59,940   Stored in directory: /tmp/pip-ephem-wheel-cache-tg6z8bwl/wheels/4e/23/73/e8ae1304ff916e6798664cbb7da55df5ff61f4dcd0c8a3f7b4
2020-05-13T18:55:59,944 Successfully built bacphlip
2020-05-13T18:56:01,759 Removed build tracker: '/tmp/pip-req-tracker-veyvivmi'