2020-05-14T12:22:53,442 Created temporary directory: /tmp/pip-ephem-wheel-cache-5j3g0dts 2020-05-14T12:22:53,446 Created temporary directory: /tmp/pip-req-tracker-voz2afnw 2020-05-14T12:22:53,447 Initialized build tracking at /tmp/pip-req-tracker-voz2afnw 2020-05-14T12:22:53,447 Created build tracker: /tmp/pip-req-tracker-voz2afnw 2020-05-14T12:22:53,448 Entered build tracker: /tmp/pip-req-tracker-voz2afnw 2020-05-14T12:22:53,449 Created temporary directory: /tmp/pip-wheel-ywra8v9k 2020-05-14T12:22:53,469 1 location(s) to search for versions of PALS-pathway: 2020-05-14T12:22:53,469 * https://pypi.org/simple/pals-pathway/ 2020-05-14T12:22:53,470 Fetching project page and analyzing links: https://pypi.org/simple/pals-pathway/ 2020-05-14T12:22:53,471 Getting page https://pypi.org/simple/pals-pathway/ 2020-05-14T12:22:53,473 Found index url https://pypi.org/simple 2020-05-14T12:22:53,712 Skipping link: No binaries permitted for PALS-pathway: https://files.pythonhosted.org/packages/6c/41/6a80919f9b8af526e412d24e0f00f38a57f52217598e74cb882e8d97baf5/PALS_pathway-1.0.0-py3-none-any.whl#sha256=227e34d6c31c689fc69780151b55d99020b7b7c4a8dd31e39a192e75a3dd0ff8 (from https://pypi.org/simple/pals-pathway/) (requires-python:>=3.6) 2020-05-14T12:22:53,717 Skipping link: No binaries permitted for PALS-pathway: https://files.pythonhosted.org/packages/99/c7/cb5e7095ec65ba4317d680f371956613ee18ec9a17280c13e414668562de/PALS_pathway-1.0.1-py3-none-any.whl#sha256=c3da52aea1276eca9448e639f3ea0b9fae2ee49942e847eb78ffa9f1751020b3 (from https://pypi.org/simple/pals-pathway/) (requires-python:>=3.6) 2020-05-14T12:22:53,718 Skipping link: No binaries permitted for PALS-pathway: https://files.pythonhosted.org/packages/21/bf/6f761631099b2a9b91e7b41f515b83dce5670836d53c3d0b4cda0d870213/PALS_pathway-1.0.2-py3-none-any.whl#sha256=b07d7f31aca7df4df6ba3a3887fa53fa210c11005da87153c2febc7ef4103c62 (from https://pypi.org/simple/pals-pathway/) (requires-python:>=3.6) 2020-05-14T12:22:53,719 Found link https://files.pythonhosted.org/packages/ec/ed/2c47ea1c408cd786333289d434b0dd88db493e7b89bb65bd428cbb4b10df/PALS-pathway-1.0.3.tar.gz#sha256=6c398ca6513bfbbe3f412451ac6973baa80c82518cc9eab13ec987e7f00124b2 (from https://pypi.org/simple/pals-pathway/) (requires-python:>=3.6), version: 1.0.3 2020-05-14T12:22:53,719 Skipping link: No binaries permitted for PALS-pathway: https://files.pythonhosted.org/packages/fb/c4/dc92d49fbd91a9afbab319d3cb6e46aac7d3f28ed36e116694d7361a4c17/PALS_pathway-1.0.3-py3-none-any.whl#sha256=56165923960782c1ff5de06f8f289a895d2f09ffff03daaa25d3961c7d5b97a3 (from https://pypi.org/simple/pals-pathway/) (requires-python:>=3.6) 2020-05-14T12:22:53,720 Found link https://files.pythonhosted.org/packages/7c/4f/55cb5158b2d5947afb8b0ccf7a6cf9cf8cc5b4291ff03f81e44cc80f6b04/PALS-pathway-1.0.4.tar.gz#sha256=eb91a27ba0d2a7ba908cd78282a5ac304e41ba0cd5b081ac5db9c97d9082fbc6 (from https://pypi.org/simple/pals-pathway/) (requires-python:>=3.6), version: 1.0.4 2020-05-14T12:22:53,721 Skipping link: No binaries permitted for PALS-pathway: https://files.pythonhosted.org/packages/84/83/a98e3664d3ebec0d21b2a04defd020723d2768653cbe71309d85806af4c0/PALS_pathway-1.0.4-py3-none-any.whl#sha256=908a9d758c423b536bfa63ab615acdd4ef8ee2f7abeb2bbd09244aa104dab4f7 (from https://pypi.org/simple/pals-pathway/) (requires-python:>=3.6) 2020-05-14T12:22:53,722 Found link https://files.pythonhosted.org/packages/d7/eb/c6d43ca71047294c6422d14c391a4b56a961f3aa065171f0bb9f53703c0c/PALS-pathway-1.0.5.tar.gz#sha256=9ded72321eed496faecb0e5cb84d40f796fd4e0f82a32301a3286d5b77f2d11d (from https://pypi.org/simple/pals-pathway/) (requires-python:>=3.6), version: 1.0.5 2020-05-14T12:22:53,723 Skipping link: No binaries permitted for PALS-pathway: https://files.pythonhosted.org/packages/60/b6/b5cfdb41ae19031dc84694130bb681682c0a2a743a8ce249c0e115b0554b/PALS_pathway-1.0.5-py3-none-any.whl#sha256=f23c4c62027c25ad8207ca43f550c2394062e6da8279514e123daf7897a387b3 (from https://pypi.org/simple/pals-pathway/) (requires-python:>=3.6) 2020-05-14T12:22:53,723 Found link https://files.pythonhosted.org/packages/d5/82/e7c6502346eae5faa988a95a7c07d4b5d6ee56f2b3e551e4a54e2ee62b18/PALS-pathway-1.0.6.tar.gz#sha256=fe1cdea3a33026f1ac09d960081e72837391653c7350d1078d13d17265a7feab (from https://pypi.org/simple/pals-pathway/) (requires-python:>=3.6), version: 1.0.6 2020-05-14T12:22:53,724 Skipping link: No binaries permitted for PALS-pathway: https://files.pythonhosted.org/packages/cc/80/a546b0908a5c050acf5e3c04580ad952b3be24a151f53a0a5ab8b918fbd3/PALS_pathway-1.0.6-py3-none-any.whl#sha256=268583b1cb408cfc5095befab5aa37ca56b800406cf9162664d8aa7b2843973f (from https://pypi.org/simple/pals-pathway/) (requires-python:>=3.6) 2020-05-14T12:22:53,725 Found link https://files.pythonhosted.org/packages/aa/5c/1c33d7467567892accb0b66fd6c84b918d7b28d6bf68a96de2f3187099c7/PALS-pathway-1.0.7.tar.gz#sha256=8c9e1ab42a03d77d902f916fb4cfefcd036a8fae429c36502c121046dc349e7a (from https://pypi.org/simple/pals-pathway/) (requires-python:>=3.6), version: 1.0.7 2020-05-14T12:22:53,726 Skipping link: No binaries permitted for PALS-pathway: https://files.pythonhosted.org/packages/6a/25/63145f99387d5b02c3107358592d7af05c645b8a6099e21e9c9a64230446/PALS_pathway-1.0.7-py3-none-any.whl#sha256=ba594baa1ac1169f620d57b2e8eaa58cb93ac327cb4a815f360e3ac2ebc00637 (from https://pypi.org/simple/pals-pathway/) (requires-python:>=3.6) 2020-05-14T12:22:53,727 Found link https://files.pythonhosted.org/packages/4a/33/29dc9a28bdac112476ff1984e0eddd7f2623d80c73b1eafda883d1e3bd0b/PALS-pathway-1.0.8.tar.gz#sha256=034c9df1f0a9337be8ad66231e5e4343d22841f99c3570d8e69f13ceaf71cb24 (from https://pypi.org/simple/pals-pathway/) (requires-python:>=3.6), version: 1.0.8 2020-05-14T12:22:53,727 Skipping link: No binaries permitted for PALS-pathway: https://files.pythonhosted.org/packages/42/ce/8ed5c0cc8aae520ff99a9016d83567e0a2df51d0bddebb048fe77ee5f798/PALS_pathway-1.0.8-py3-none-any.whl#sha256=a6af60a3c09950e07bd2f659692fa59d424dd80414b968381bbfc592f1364095 (from https://pypi.org/simple/pals-pathway/) (requires-python:>=3.6) 2020-05-14T12:22:53,728 Found link https://files.pythonhosted.org/packages/cc/65/a70643c5f062ca644703970538292914d73479037c8903f9a0241bc185e1/PALS-pathway-1.0.9.tar.gz#sha256=6806b08545b7ce8f6c8ad3a39a6f9e7f99af51b0f3de9230fed1fbbbcf2e49f1 (from https://pypi.org/simple/pals-pathway/) (requires-python:>=3.6), version: 1.0.9 2020-05-14T12:22:53,729 Skipping link: No binaries permitted for PALS-pathway: https://files.pythonhosted.org/packages/3f/d0/514f4c31d0d0d0db23b784da604f13ca44e18e65c8c79c52c31b58a9e43d/PALS_pathway-1.0.9-py3-none-any.whl#sha256=63f4170a5d4d1ab0cf4e06de7051e7c61fc28a749353889d3d3d9401c43fb899 (from https://pypi.org/simple/pals-pathway/) (requires-python:>=3.6) 2020-05-14T12:22:53,730 Found link https://files.pythonhosted.org/packages/c4/2c/827f5b8d15a946f208fc5d27d5fab9c0dae3c8015e50d27561f749ff5365/PALS-pathway-1.1.0.tar.gz#sha256=a775add11ddfe69de4dcccb6d4e0406af02803c6bc065ac9b00a8afab57908bb (from https://pypi.org/simple/pals-pathway/) (requires-python:>=3.6), version: 1.1.0 2020-05-14T12:22:53,730 Skipping link: No binaries permitted for PALS-pathway: https://files.pythonhosted.org/packages/29/17/4d950c07c4f02a205048b3327d797772896a7d5e866909ddf88cd3009e04/PALS_pathway-1.1.0-py3-none-any.whl#sha256=20003754f1fd9904daac238a1f40536b7f6bc8bc07cdb6f6f11a266bc1718d4d (from https://pypi.org/simple/pals-pathway/) (requires-python:>=3.6) 2020-05-14T12:22:53,731 Found link https://files.pythonhosted.org/packages/b6/e7/d5dff82cc547ee1ee10e71f6c29efa61c94413a907753a3653c6ea19e49a/PALS-pathway-1.1.1.tar.gz#sha256=db3f1a4578527901b1f5d7bbe3280bcc2e92f4ec96a857457b6500f510101529 (from https://pypi.org/simple/pals-pathway/) (requires-python:>=3.6), version: 1.1.1 2020-05-14T12:22:53,732 Skipping link: No binaries permitted for PALS-pathway: https://files.pythonhosted.org/packages/0a/d2/5342318ff573ae6136887c66492dcb422558b018fe8edb838d89408a69c5/PALS_pathway-1.1.1-py3-none-any.whl#sha256=6b572b22b3e199f4f1db2f81684a85cdf5c4fb1357cb335187d608c6d231b56f (from https://pypi.org/simple/pals-pathway/) (requires-python:>=3.6) 2020-05-14T12:22:53,732 Skipping link: No binaries permitted for PALS-pathway: https://files.pythonhosted.org/packages/a0/47/65cfabaa8675d383e61b8cf2dceff79198e1cae7f739591dbeb27a500624/PALS_pathway-1.1.2-py3-none-any.whl#sha256=99a92e8502d4367d14434197e5d8b8ce414f48240cdbd347680b4a9b626c474f (from https://pypi.org/simple/pals-pathway/) (requires-python:>=3.6) 2020-05-14T12:22:53,733 Skipping link: No binaries permitted for PALS-pathway: https://files.pythonhosted.org/packages/86/05/8a9637d549d835acc68ac427465914426a7c8e3c3d1c6e2f520373a7c2cd/PALS_pathway-1.1.3-py2-none-any.whl#sha256=acf0c1e763d894b7eea705cb775a23aee4974841226b3bab95069307d709eb09 (from https://pypi.org/simple/pals-pathway/) (requires-python:>=3.6) 2020-05-14T12:22:53,733 Skipping link: No binaries permitted for PALS-pathway: https://files.pythonhosted.org/packages/b0/cf/5c6bdc3b5cb3cf88b60dd361a9bcba907fcae6d2e8d904a7199d51da724f/PALS_pathway-1.1.3-py3-none-any.whl#sha256=0c82d34f5c58191b5a5edc980e0a605727157c76a3b7a44ec8f593267fc28993 (from https://pypi.org/simple/pals-pathway/) (requires-python:>=3.6) 2020-05-14T12:22:53,734 Skipping link: No binaries permitted for PALS-pathway: https://files.pythonhosted.org/packages/a8/0d/46cb805406dbe97a02e74205667f7160cd470a3a220e8e037eab78a9e2c4/PALS_pathway-1.1.4-py3-none-any.whl#sha256=1234063ba6e10886e31f2e4705eca895569dae29dad7c5e6a263a89f963619a5 (from https://pypi.org/simple/pals-pathway/) (requires-python:>=3.6) 2020-05-14T12:22:53,735 Found link https://files.pythonhosted.org/packages/c8/ae/e1e145d31bcb049f57951b144a98d98fc80af13a11b9be64f373161c4eb8/PALS-pathway-1.1.5.tar.gz#sha256=cfb8619b38c1b04a2d5da015822628dd7c4117e9e74d79971ae3025e2a2d8fa2 (from https://pypi.org/simple/pals-pathway/) (requires-python:>=3.6), version: 1.1.5 2020-05-14T12:22:53,735 Skipping link: No binaries permitted for PALS-pathway: https://files.pythonhosted.org/packages/ce/2e/7f977951644cc51fd96052a4d00beeb5ba2208235db8a10da996887a8646/PALS_pathway-1.1.5-py3-none-any.whl#sha256=19bf41760d6b7fb01a06247069800b40545039b1330196300d71519efaca11bc (from https://pypi.org/simple/pals-pathway/) (requires-python:>=3.6) 2020-05-14T12:22:53,736 Found link https://files.pythonhosted.org/packages/ac/41/4fcb73b945c8c291d89ed40b8e6bb42d460935ea4b853571a68026ebb09b/PALS-pathway-1.1.6.tar.gz#sha256=6add2eb77aa735efe30a0a051b3c599dc78a67ad2513655ffa1b5dd9467da400 (from https://pypi.org/simple/pals-pathway/) (requires-python:>=3.6), version: 1.1.6 2020-05-14T12:22:53,737 Skipping link: No binaries permitted for PALS-pathway: https://files.pythonhosted.org/packages/ed/27/4a7013f02cf5df54212a0a9e17c82e8f00ee889c4d790858f29a8132dedd/PALS_pathway-1.1.6-py3-none-any.whl#sha256=597a0538ed66d9c6d73e747c8e0113db63e80235c9ea9dddb31d6e35a7c5ded0 (from https://pypi.org/simple/pals-pathway/) (requires-python:>=3.6) 2020-05-14T12:22:53,737 Skipping link: No binaries permitted for PALS-pathway: https://files.pythonhosted.org/packages/a7/64/84fcf7953157a2c0ef4d3e93d2ffd2cfa7d6db1aa4dec7662423be22a3a5/PALS_pathway-1.1.7-py3-none-any.whl#sha256=f16cc4c5c2f34cb6a418b98040420b8fa521e00d8ac716ad1bc3f2a8f0331ccb (from https://pypi.org/simple/pals-pathway/) (requires-python:>=3.6) 2020-05-14T12:22:53,738 Found link https://files.pythonhosted.org/packages/ef/dc/f9c0ad941b1a21ce72616d48358a4e1582f59e8e0cffa3f77dc046cbffb2/PALS-pathway-1.2.0.tar.gz#sha256=199796483b1f808067de1a5ce9298ed0bc4b27aba1430d8bb742579c403787a5 (from https://pypi.org/simple/pals-pathway/) (requires-python:>=3.6), version: 1.2.0 2020-05-14T12:22:53,739 Skipping link: No binaries permitted for PALS-pathway: https://files.pythonhosted.org/packages/ac/ce/c147dee02670eee4fc754023f239a52ff84136d5b966c6289c834011bd02/PALS_pathway-1.2.0-py3-none-any.whl#sha256=227c9432f21b81ef1e05f69495277870cb5efe818540281b228a26a3b2085d3f (from https://pypi.org/simple/pals-pathway/) (requires-python:>=3.6) 2020-05-14T12:22:53,740 Found link https://files.pythonhosted.org/packages/3c/a0/adf0ba73f0341ef73e3614c13174836714faab5245e3d1254b8799c4d958/PALS-pathway-1.3.0.tar.gz#sha256=d7d73eae4748a1ace93f17a06236a6a183a403e17569b65e4727c15abe933843 (from https://pypi.org/simple/pals-pathway/) (requires-python:>=3.6), version: 1.3.0 2020-05-14T12:22:53,741 Skipping link: No binaries permitted for PALS-pathway: https://files.pythonhosted.org/packages/16/da/ba2142f7082429a2ae631c25f9df7968ca7fa6c21f8d61e854ed3802c58a/PALS_pathway-1.3.0-py3-none-any.whl#sha256=04c512094b660a92ec46210acc765ad89a993bdcccc317a389d75353a569f2a2 (from https://pypi.org/simple/pals-pathway/) (requires-python:>=3.6) 2020-05-14T12:22:53,752 Given no hashes to check 1 links for project 'PALS-pathway': discarding no candidates 2020-05-14T12:22:53,753 Using version 1.3.0 (newest of versions: 1.3.0) 2020-05-14T12:22:53,759 Collecting PALS-pathway==1.3.0 2020-05-14T12:22:53,762 Created temporary directory: /tmp/pip-unpack-mak6f3i3 2020-05-14T12:22:58,280 Downloading PALS-pathway-1.3.0.tar.gz (38.1 MB) 2020-05-14T12:23:10,885 Added PALS-pathway==1.3.0 from https://files.pythonhosted.org/packages/3c/a0/adf0ba73f0341ef73e3614c13174836714faab5245e3d1254b8799c4d958/PALS-pathway-1.3.0.tar.gz#sha256=d7d73eae4748a1ace93f17a06236a6a183a403e17569b65e4727c15abe933843 to build tracker '/tmp/pip-req-tracker-voz2afnw' 2020-05-14T12:23:10,888 Running setup.py (path:/tmp/pip-wheel-ywra8v9k/PALS-pathway/setup.py) egg_info for package PALS-pathway 2020-05-14T12:23:10,889 Created temporary directory: /tmp/pip-pip-egg-info-mcaixd8t 2020-05-14T12:23:10,890 Running command python setup.py egg_info 2020-05-14T12:23:12,684 running egg_info 2020-05-14T12:23:12,688 creating /tmp/pip-pip-egg-info-mcaixd8t/PALS_pathway.egg-info 2020-05-14T12:23:12,690 writing /tmp/pip-pip-egg-info-mcaixd8t/PALS_pathway.egg-info/PKG-INFO 2020-05-14T12:23:12,695 writing dependency_links to /tmp/pip-pip-egg-info-mcaixd8t/PALS_pathway.egg-info/dependency_links.txt 2020-05-14T12:23:12,699 writing top-level names to /tmp/pip-pip-egg-info-mcaixd8t/PALS_pathway.egg-info/top_level.txt 2020-05-14T12:23:12,703 writing manifest file '/tmp/pip-pip-egg-info-mcaixd8t/PALS_pathway.egg-info/SOURCES.txt' 2020-05-14T12:23:13,020 reading manifest file '/tmp/pip-pip-egg-info-mcaixd8t/PALS_pathway.egg-info/SOURCES.txt' 2020-05-14T12:23:13,031 writing manifest file '/tmp/pip-pip-egg-info-mcaixd8t/PALS_pathway.egg-info/SOURCES.txt' 2020-05-14T12:23:13,150 Source in /tmp/pip-wheel-ywra8v9k/PALS-pathway has version 1.3.0, which satisfies requirement PALS-pathway==1.3.0 from https://files.pythonhosted.org/packages/3c/a0/adf0ba73f0341ef73e3614c13174836714faab5245e3d1254b8799c4d958/PALS-pathway-1.3.0.tar.gz#sha256=d7d73eae4748a1ace93f17a06236a6a183a403e17569b65e4727c15abe933843 2020-05-14T12:23:13,152 Removed PALS-pathway==1.3.0 from https://files.pythonhosted.org/packages/3c/a0/adf0ba73f0341ef73e3614c13174836714faab5245e3d1254b8799c4d958/PALS-pathway-1.3.0.tar.gz#sha256=d7d73eae4748a1ace93f17a06236a6a183a403e17569b65e4727c15abe933843 from build tracker '/tmp/pip-req-tracker-voz2afnw' 2020-05-14T12:23:13,155 Building wheels for collected packages: PALS-pathway 2020-05-14T12:23:13,164 Created temporary directory: /tmp/pip-wheel-xi8oj77j 2020-05-14T12:23:13,166 Building wheel for PALS-pathway (setup.py): started 2020-05-14T12:23:13,166 Destination directory: /tmp/pip-wheel-xi8oj77j 2020-05-14T12:23:13,167 Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-ywra8v9k/PALS-pathway/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-ywra8v9k/PALS-pathway/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-xi8oj77j 2020-05-14T12:23:14,965 running bdist_wheel 2020-05-14T12:23:14,979 running build 2020-05-14T12:23:14,980 running build_py 2020-05-14T12:23:15,262 creating build 2020-05-14T12:23:15,263 creating build/lib 2020-05-14T12:23:15,265 creating build/lib/pals 2020-05-14T12:23:15,269 copying pals/feature_extraction.py -> build/lib/pals 2020-05-14T12:23:15,276 copying pals/run_gui.py -> build/lib/pals 2020-05-14T12:23:15,281 copying pals/noise.py -> build/lib/pals 2020-05-14T12:23:15,287 copying pals/run_gui_pathway.py -> build/lib/pals 2020-05-14T12:23:15,293 copying pals/session_state.py -> build/lib/pals 2020-05-14T12:23:15,298 copying pals/common.py -> build/lib/pals 2020-05-14T12:23:15,304 copying pals/pimp_tools.py -> build/lib/pals 2020-05-14T12:23:15,309 copying pals/GSEA.py -> build/lib/pals 2020-05-14T12:23:15,315 copying pals/__init__.py -> build/lib/pals 2020-05-14T12:23:15,318 copying pals/ORA.py -> build/lib/pals 2020-05-14T12:23:15,324 copying pals/reactome.py -> build/lib/pals 2020-05-14T12:23:15,330 copying pals/PLAGE.py -> build/lib/pals 2020-05-14T12:23:15,336 copying pals/run_gui_gnps.py -> build/lib/pals 2020-05-14T12:23:15,341 copying pals/loader.py -> build/lib/pals 2020-05-14T12:23:15,347 copying pals/run.py -> build/lib/pals 2020-05-14T12:23:15,352 copying pals/evaluation.py -> build/lib/pals 2020-05-14T12:23:15,382 creating build/lib/pals/data 2020-05-14T12:23:15,384 copying pals/data/COMPOUND.json.zip -> build/lib/pals/data 2020-05-14T12:23:15,410 copying pals/data/PiMP_KEGG.json.zip -> build/lib/pals/data 2020-05-14T12:23:15,439 copying pals/data/ChEBI.json.zip -> build/lib/pals/data 2020-05-14T12:23:15,612 creating build/lib/pals/data/reactome 2020-05-14T12:23:15,614 creating build/lib/pals/data/reactome/metabolic_pathways 2020-05-14T12:23:15,615 creating build/lib/pals/data/reactome/metabolic_pathways/ChEBI 2020-05-14T12:23:15,619 copying pals/data/reactome/metabolic_pathways/ChEBI/Saccharomyces cerevisiae.json.zip -> build/lib/pals/data/reactome/metabolic_pathways/ChEBI 2020-05-14T12:23:15,792 copying pals/data/reactome/metabolic_pathways/ChEBI/Arabidopsis thaliana.json.zip -> build/lib/pals/data/reactome/metabolic_pathways/ChEBI 2020-05-14T12:23:15,968 copying pals/data/reactome/metabolic_pathways/ChEBI/Xenopus tropicalis.json.zip -> build/lib/pals/data/reactome/metabolic_pathways/ChEBI 2020-05-14T12:23:16,140 copying pals/data/reactome/metabolic_pathways/ChEBI/Mus musculus.json.zip -> build/lib/pals/data/reactome/metabolic_pathways/ChEBI 2020-05-14T12:23:16,317 copying pals/data/reactome/metabolic_pathways/ChEBI/Schizosaccharomyces pombe.json.zip -> build/lib/pals/data/reactome/metabolic_pathways/ChEBI 2020-05-14T12:23:16,492 copying pals/data/reactome/metabolic_pathways/ChEBI/Rattus norvegicus.json.zip -> build/lib/pals/data/reactome/metabolic_pathways/ChEBI 2020-05-14T12:23:16,665 copying pals/data/reactome/metabolic_pathways/ChEBI/Homo sapiens.json.zip -> build/lib/pals/data/reactome/metabolic_pathways/ChEBI 2020-05-14T12:23:16,833 copying pals/data/reactome/metabolic_pathways/ChEBI/Bos taurus.json.zip -> build/lib/pals/data/reactome/metabolic_pathways/ChEBI 2020-05-14T12:23:17,007 copying pals/data/reactome/metabolic_pathways/ChEBI/Drosophila melanogaster.json.zip -> build/lib/pals/data/reactome/metabolic_pathways/ChEBI 2020-05-14T12:23:17,173 copying pals/data/reactome/metabolic_pathways/ChEBI/Gallus gallus.json.zip -> build/lib/pals/data/reactome/metabolic_pathways/ChEBI 2020-05-14T12:23:17,342 copying pals/data/reactome/metabolic_pathways/ChEBI/Taeniopygia guttata.json.zip -> build/lib/pals/data/reactome/metabolic_pathways/ChEBI 2020-05-14T12:23:17,518 copying pals/data/reactome/metabolic_pathways/ChEBI/Oryza sativa.json.zip -> build/lib/pals/data/reactome/metabolic_pathways/ChEBI 2020-05-14T12:23:17,693 copying pals/data/reactome/metabolic_pathways/ChEBI/Danio rerio.json.zip -> build/lib/pals/data/reactome/metabolic_pathways/ChEBI 2020-05-14T12:23:17,869 copying pals/data/reactome/metabolic_pathways/ChEBI/Caenorhabditis elegans.json.zip -> build/lib/pals/data/reactome/metabolic_pathways/ChEBI 2020-05-14T12:23:18,045 copying pals/data/reactome/metabolic_pathways/ChEBI/Sus scrofa.json.zip -> build/lib/pals/data/reactome/metabolic_pathways/ChEBI 2020-05-14T12:23:18,219 copying pals/data/reactome/metabolic_pathways/ChEBI/Dictyostelium discoideum.json.zip -> build/lib/pals/data/reactome/metabolic_pathways/ChEBI 2020-05-14T12:23:18,387 copying pals/data/reactome/metabolic_pathways/ChEBI/Canis familiaris.json.zip -> build/lib/pals/data/reactome/metabolic_pathways/ChEBI 2020-05-14T12:23:18,562 copying pals/data/reactome/metabolic_pathways/ChEBI/Plasmodium falciparum.json.zip -> build/lib/pals/data/reactome/metabolic_pathways/ChEBI 2020-05-14T12:23:18,729 creating build/lib/pals/data/reactome/metabolic_pathways/COMPOUND 2020-05-14T12:23:18,732 copying pals/data/reactome/metabolic_pathways/COMPOUND/Saccharomyces cerevisiae.json.zip -> build/lib/pals/data/reactome/metabolic_pathways/COMPOUND 2020-05-14T12:23:18,761 copying pals/data/reactome/metabolic_pathways/COMPOUND/Arabidopsis thaliana.json.zip -> build/lib/pals/data/reactome/metabolic_pathways/COMPOUND 2020-05-14T12:23:18,788 copying pals/data/reactome/metabolic_pathways/COMPOUND/Xenopus tropicalis.json.zip -> build/lib/pals/data/reactome/metabolic_pathways/COMPOUND 2020-05-14T12:23:18,815 copying pals/data/reactome/metabolic_pathways/COMPOUND/Mus musculus.json.zip -> build/lib/pals/data/reactome/metabolic_pathways/COMPOUND 2020-05-14T12:23:18,842 copying pals/data/reactome/metabolic_pathways/COMPOUND/Schizosaccharomyces pombe.json.zip -> build/lib/pals/data/reactome/metabolic_pathways/COMPOUND 2020-05-14T12:23:18,871 copying pals/data/reactome/metabolic_pathways/COMPOUND/Rattus norvegicus.json.zip -> build/lib/pals/data/reactome/metabolic_pathways/COMPOUND 2020-05-14T12:23:18,900 copying pals/data/reactome/metabolic_pathways/COMPOUND/Homo sapiens.json.zip -> build/lib/pals/data/reactome/metabolic_pathways/COMPOUND 2020-05-14T12:23:18,929 copying pals/data/reactome/metabolic_pathways/COMPOUND/Bos taurus.json.zip -> build/lib/pals/data/reactome/metabolic_pathways/COMPOUND 2020-05-14T12:23:18,956 copying pals/data/reactome/metabolic_pathways/COMPOUND/Drosophila melanogaster.json.zip -> build/lib/pals/data/reactome/metabolic_pathways/COMPOUND 2020-05-14T12:23:18,983 copying pals/data/reactome/metabolic_pathways/COMPOUND/Gallus gallus.json.zip -> build/lib/pals/data/reactome/metabolic_pathways/COMPOUND 2020-05-14T12:23:19,011 copying pals/data/reactome/metabolic_pathways/COMPOUND/Taeniopygia guttata.json.zip -> build/lib/pals/data/reactome/metabolic_pathways/COMPOUND 2020-05-14T12:23:19,038 copying pals/data/reactome/metabolic_pathways/COMPOUND/Oryza sativa.json.zip -> build/lib/pals/data/reactome/metabolic_pathways/COMPOUND 2020-05-14T12:23:19,066 copying pals/data/reactome/metabolic_pathways/COMPOUND/Danio rerio.json.zip -> build/lib/pals/data/reactome/metabolic_pathways/COMPOUND 2020-05-14T12:23:19,096 copying pals/data/reactome/metabolic_pathways/COMPOUND/Caenorhabditis elegans.json.zip -> build/lib/pals/data/reactome/metabolic_pathways/COMPOUND 2020-05-14T12:23:19,124 copying pals/data/reactome/metabolic_pathways/COMPOUND/Sus scrofa.json.zip -> build/lib/pals/data/reactome/metabolic_pathways/COMPOUND 2020-05-14T12:23:19,152 copying pals/data/reactome/metabolic_pathways/COMPOUND/Dictyostelium discoideum.json.zip -> build/lib/pals/data/reactome/metabolic_pathways/COMPOUND 2020-05-14T12:23:19,179 copying pals/data/reactome/metabolic_pathways/COMPOUND/Canis familiaris.json.zip -> build/lib/pals/data/reactome/metabolic_pathways/COMPOUND 2020-05-14T12:23:19,207 copying pals/data/reactome/metabolic_pathways/COMPOUND/Plasmodium falciparum.json.zip -> build/lib/pals/data/reactome/metabolic_pathways/COMPOUND 2020-05-14T12:23:19,241 running build_scripts 2020-05-14T12:23:19,243 creating build/scripts-3.7 2020-05-14T12:23:19,248 copying and adjusting pals/run.py -> build/scripts-3.7 2020-05-14T12:23:19,254 changing mode of build/scripts-3.7/run.py from 644 to 755 2020-05-14T12:23:19,262 installing to build/bdist.linux-armv7l/wheel 2020-05-14T12:23:19,262 running install 2020-05-14T12:23:19,265 running install_lib 2020-05-14T12:23:19,273 creating build/bdist.linux-armv7l 2020-05-14T12:23:19,275 creating build/bdist.linux-armv7l/wheel 2020-05-14T12:23:19,279 creating build/bdist.linux-armv7l/wheel/pals 2020-05-14T12:23:19,282 copying build/lib/pals/feature_extraction.py -> build/bdist.linux-armv7l/wheel/pals 2020-05-14T12:23:19,290 copying build/lib/pals/run_gui.py -> build/bdist.linux-armv7l/wheel/pals 2020-05-14T12:23:19,296 copying build/lib/pals/noise.py -> build/bdist.linux-armv7l/wheel/pals 2020-05-14T12:23:19,301 copying build/lib/pals/run_gui_pathway.py -> build/bdist.linux-armv7l/wheel/pals 2020-05-14T12:23:19,308 copying build/lib/pals/session_state.py -> build/bdist.linux-armv7l/wheel/pals 2020-05-14T12:23:19,313 copying build/lib/pals/common.py -> build/bdist.linux-armv7l/wheel/pals 2020-05-14T12:23:19,319 copying build/lib/pals/pimp_tools.py -> build/bdist.linux-armv7l/wheel/pals 2020-05-14T12:23:19,324 copying build/lib/pals/GSEA.py -> build/bdist.linux-armv7l/wheel/pals 2020-05-14T12:23:19,330 copying build/lib/pals/__init__.py -> build/bdist.linux-armv7l/wheel/pals 2020-05-14T12:23:19,335 creating build/bdist.linux-armv7l/wheel/pals/data 2020-05-14T12:23:19,339 creating build/bdist.linux-armv7l/wheel/pals/data/reactome 2020-05-14T12:23:19,343 creating build/bdist.linux-armv7l/wheel/pals/data/reactome/metabolic_pathways 2020-05-14T12:23:19,348 creating build/bdist.linux-armv7l/wheel/pals/data/reactome/metabolic_pathways/ChEBI 2020-05-14T12:23:19,351 copying build/lib/pals/data/reactome/metabolic_pathways/ChEBI/Saccharomyces cerevisiae.json.zip -> build/bdist.linux-armv7l/wheel/pals/data/reactome/metabolic_pathways/ChEBI 2020-05-14T12:23:19,517 copying build/lib/pals/data/reactome/metabolic_pathways/ChEBI/Arabidopsis thaliana.json.zip -> build/bdist.linux-armv7l/wheel/pals/data/reactome/metabolic_pathways/ChEBI 2020-05-14T12:23:19,682 copying build/lib/pals/data/reactome/metabolic_pathways/ChEBI/Xenopus tropicalis.json.zip -> build/bdist.linux-armv7l/wheel/pals/data/reactome/metabolic_pathways/ChEBI 2020-05-14T12:23:19,851 copying build/lib/pals/data/reactome/metabolic_pathways/ChEBI/Mus musculus.json.zip -> build/bdist.linux-armv7l/wheel/pals/data/reactome/metabolic_pathways/ChEBI 2020-05-14T12:23:20,025 copying build/lib/pals/data/reactome/metabolic_pathways/ChEBI/Schizosaccharomyces pombe.json.zip -> build/bdist.linux-armv7l/wheel/pals/data/reactome/metabolic_pathways/ChEBI 2020-05-14T12:23:20,199 copying build/lib/pals/data/reactome/metabolic_pathways/ChEBI/Rattus norvegicus.json.zip -> build/bdist.linux-armv7l/wheel/pals/data/reactome/metabolic_pathways/ChEBI 2020-05-14T12:23:20,374 copying build/lib/pals/data/reactome/metabolic_pathways/ChEBI/Homo sapiens.json.zip -> build/bdist.linux-armv7l/wheel/pals/data/reactome/metabolic_pathways/ChEBI 2020-05-14T12:23:20,547 copying build/lib/pals/data/reactome/metabolic_pathways/ChEBI/Bos taurus.json.zip -> build/bdist.linux-armv7l/wheel/pals/data/reactome/metabolic_pathways/ChEBI 2020-05-14T12:23:20,715 copying build/lib/pals/data/reactome/metabolic_pathways/ChEBI/Drosophila melanogaster.json.zip -> build/bdist.linux-armv7l/wheel/pals/data/reactome/metabolic_pathways/ChEBI 2020-05-14T12:23:20,890 copying build/lib/pals/data/reactome/metabolic_pathways/ChEBI/Gallus gallus.json.zip -> build/bdist.linux-armv7l/wheel/pals/data/reactome/metabolic_pathways/ChEBI 2020-05-14T12:23:21,063 copying build/lib/pals/data/reactome/metabolic_pathways/ChEBI/Taeniopygia guttata.json.zip -> build/bdist.linux-armv7l/wheel/pals/data/reactome/metabolic_pathways/ChEBI 2020-05-14T12:23:21,237 copying build/lib/pals/data/reactome/metabolic_pathways/ChEBI/Oryza sativa.json.zip -> build/bdist.linux-armv7l/wheel/pals/data/reactome/metabolic_pathways/ChEBI 2020-05-14T12:23:21,411 copying build/lib/pals/data/reactome/metabolic_pathways/ChEBI/Danio rerio.json.zip -> build/bdist.linux-armv7l/wheel/pals/data/reactome/metabolic_pathways/ChEBI 2020-05-14T12:23:21,577 copying build/lib/pals/data/reactome/metabolic_pathways/ChEBI/Caenorhabditis elegans.json.zip -> build/bdist.linux-armv7l/wheel/pals/data/reactome/metabolic_pathways/ChEBI 2020-05-14T12:23:21,745 copying build/lib/pals/data/reactome/metabolic_pathways/ChEBI/Sus scrofa.json.zip -> build/bdist.linux-armv7l/wheel/pals/data/reactome/metabolic_pathways/ChEBI 2020-05-14T12:23:21,920 copying build/lib/pals/data/reactome/metabolic_pathways/ChEBI/Dictyostelium discoideum.json.zip -> build/bdist.linux-armv7l/wheel/pals/data/reactome/metabolic_pathways/ChEBI 2020-05-14T12:23:22,093 copying build/lib/pals/data/reactome/metabolic_pathways/ChEBI/Canis familiaris.json.zip -> build/bdist.linux-armv7l/wheel/pals/data/reactome/metabolic_pathways/ChEBI 2020-05-14T12:23:22,261 copying build/lib/pals/data/reactome/metabolic_pathways/ChEBI/Plasmodium falciparum.json.zip -> build/bdist.linux-armv7l/wheel/pals/data/reactome/metabolic_pathways/ChEBI 2020-05-14T12:23:22,434 creating build/bdist.linux-armv7l/wheel/pals/data/reactome/metabolic_pathways/COMPOUND 2020-05-14T12:23:22,436 copying build/lib/pals/data/reactome/metabolic_pathways/COMPOUND/Saccharomyces cerevisiae.json.zip -> build/bdist.linux-armv7l/wheel/pals/data/reactome/metabolic_pathways/COMPOUND 2020-05-14T12:23:22,462 copying build/lib/pals/data/reactome/metabolic_pathways/COMPOUND/Arabidopsis thaliana.json.zip -> build/bdist.linux-armv7l/wheel/pals/data/reactome/metabolic_pathways/COMPOUND 2020-05-14T12:23:22,488 copying build/lib/pals/data/reactome/metabolic_pathways/COMPOUND/Xenopus tropicalis.json.zip -> build/bdist.linux-armv7l/wheel/pals/data/reactome/metabolic_pathways/COMPOUND 2020-05-14T12:23:22,515 copying build/lib/pals/data/reactome/metabolic_pathways/COMPOUND/Mus musculus.json.zip -> build/bdist.linux-armv7l/wheel/pals/data/reactome/metabolic_pathways/COMPOUND 2020-05-14T12:23:22,542 copying build/lib/pals/data/reactome/metabolic_pathways/COMPOUND/Schizosaccharomyces pombe.json.zip -> build/bdist.linux-armv7l/wheel/pals/data/reactome/metabolic_pathways/COMPOUND 2020-05-14T12:23:22,569 copying build/lib/pals/data/reactome/metabolic_pathways/COMPOUND/Rattus norvegicus.json.zip -> build/bdist.linux-armv7l/wheel/pals/data/reactome/metabolic_pathways/COMPOUND 2020-05-14T12:23:22,595 copying build/lib/pals/data/reactome/metabolic_pathways/COMPOUND/Homo sapiens.json.zip -> build/bdist.linux-armv7l/wheel/pals/data/reactome/metabolic_pathways/COMPOUND 2020-05-14T12:23:22,621 copying build/lib/pals/data/reactome/metabolic_pathways/COMPOUND/Bos taurus.json.zip -> build/bdist.linux-armv7l/wheel/pals/data/reactome/metabolic_pathways/COMPOUND 2020-05-14T12:23:22,648 copying build/lib/pals/data/reactome/metabolic_pathways/COMPOUND/Drosophila melanogaster.json.zip -> build/bdist.linux-armv7l/wheel/pals/data/reactome/metabolic_pathways/COMPOUND 2020-05-14T12:23:22,674 copying build/lib/pals/data/reactome/metabolic_pathways/COMPOUND/Gallus gallus.json.zip -> build/bdist.linux-armv7l/wheel/pals/data/reactome/metabolic_pathways/COMPOUND 2020-05-14T12:23:22,702 copying build/lib/pals/data/reactome/metabolic_pathways/COMPOUND/Taeniopygia guttata.json.zip -> build/bdist.linux-armv7l/wheel/pals/data/reactome/metabolic_pathways/COMPOUND 2020-05-14T12:23:22,728 copying build/lib/pals/data/reactome/metabolic_pathways/COMPOUND/Oryza sativa.json.zip -> build/bdist.linux-armv7l/wheel/pals/data/reactome/metabolic_pathways/COMPOUND 2020-05-14T12:23:22,754 copying build/lib/pals/data/reactome/metabolic_pathways/COMPOUND/Danio rerio.json.zip -> build/bdist.linux-armv7l/wheel/pals/data/reactome/metabolic_pathways/COMPOUND 2020-05-14T12:23:22,781 copying build/lib/pals/data/reactome/metabolic_pathways/COMPOUND/Caenorhabditis elegans.json.zip -> build/bdist.linux-armv7l/wheel/pals/data/reactome/metabolic_pathways/COMPOUND 2020-05-14T12:23:22,808 copying build/lib/pals/data/reactome/metabolic_pathways/COMPOUND/Sus scrofa.json.zip -> build/bdist.linux-armv7l/wheel/pals/data/reactome/metabolic_pathways/COMPOUND 2020-05-14T12:23:22,834 copying build/lib/pals/data/reactome/metabolic_pathways/COMPOUND/Dictyostelium discoideum.json.zip -> build/bdist.linux-armv7l/wheel/pals/data/reactome/metabolic_pathways/COMPOUND 2020-05-14T12:23:22,861 copying build/lib/pals/data/reactome/metabolic_pathways/COMPOUND/Canis familiaris.json.zip -> build/bdist.linux-armv7l/wheel/pals/data/reactome/metabolic_pathways/COMPOUND 2020-05-14T12:23:22,888 copying build/lib/pals/data/reactome/metabolic_pathways/COMPOUND/Plasmodium falciparum.json.zip -> build/bdist.linux-armv7l/wheel/pals/data/reactome/metabolic_pathways/COMPOUND 2020-05-14T12:23:22,914 copying build/lib/pals/data/COMPOUND.json.zip -> build/bdist.linux-armv7l/wheel/pals/data 2020-05-14T12:23:22,941 copying build/lib/pals/data/PiMP_KEGG.json.zip -> build/bdist.linux-armv7l/wheel/pals/data 2020-05-14T12:23:22,971 copying build/lib/pals/data/ChEBI.json.zip -> build/bdist.linux-armv7l/wheel/pals/data 2020-05-14T12:23:23,137 copying build/lib/pals/ORA.py -> build/bdist.linux-armv7l/wheel/pals 2020-05-14T12:23:23,145 copying build/lib/pals/reactome.py -> build/bdist.linux-armv7l/wheel/pals 2020-05-14T12:23:23,154 copying build/lib/pals/PLAGE.py -> build/bdist.linux-armv7l/wheel/pals 2020-05-14T12:23:23,161 copying build/lib/pals/run_gui_gnps.py -> build/bdist.linux-armv7l/wheel/pals 2020-05-14T12:23:23,166 copying build/lib/pals/loader.py -> build/bdist.linux-armv7l/wheel/pals 2020-05-14T12:23:23,173 copying build/lib/pals/run.py -> build/bdist.linux-armv7l/wheel/pals 2020-05-14T12:23:23,178 copying build/lib/pals/evaluation.py -> build/bdist.linux-armv7l/wheel/pals 2020-05-14T12:23:23,185 running install_egg_info 2020-05-14T12:23:23,227 running egg_info 2020-05-14T12:23:23,228 writing PALS_pathway.egg-info/PKG-INFO 2020-05-14T12:23:23,232 writing dependency_links to PALS_pathway.egg-info/dependency_links.txt 2020-05-14T12:23:23,237 writing top-level names to PALS_pathway.egg-info/top_level.txt 2020-05-14T12:23:23,259 reading manifest file 'PALS_pathway.egg-info/SOURCES.txt' 2020-05-14T12:23:23,274 writing manifest file 'PALS_pathway.egg-info/SOURCES.txt' 2020-05-14T12:23:23,277 Copying PALS_pathway.egg-info to build/bdist.linux-armv7l/wheel/PALS_pathway-1.3.0-py3.7.egg-info 2020-05-14T12:23:23,296 running install_scripts 2020-05-14T12:23:23,397 creating build/bdist.linux-armv7l/wheel/PALS_pathway-1.3.0.data 2020-05-14T12:23:23,398 creating build/bdist.linux-armv7l/wheel/PALS_pathway-1.3.0.data/scripts 2020-05-14T12:23:23,400 copying build/scripts-3.7/run.py -> build/bdist.linux-armv7l/wheel/PALS_pathway-1.3.0.data/scripts 2020-05-14T12:23:23,405 changing mode of build/bdist.linux-armv7l/wheel/PALS_pathway-1.3.0.data/scripts/run.py to 755 2020-05-14T12:23:23,440 creating build/bdist.linux-armv7l/wheel/PALS_pathway-1.3.0.dist-info/WHEEL 2020-05-14T12:23:23,445 creating '/tmp/pip-wheel-xi8oj77j/PALS_pathway-1.3.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2020-05-14T12:23:23,452 adding 'PALS_pathway-1.3.0.data/scripts/run.py' 2020-05-14T12:23:23,458 adding 'pals/GSEA.py' 2020-05-14T12:23:23,461 adding 'pals/ORA.py' 2020-05-14T12:23:23,465 adding 'pals/PLAGE.py' 2020-05-14T12:23:23,468 adding 'pals/__init__.py' 2020-05-14T12:23:23,471 adding 'pals/common.py' 2020-05-14T12:23:23,476 adding 'pals/evaluation.py' 2020-05-14T12:23:23,481 adding 'pals/feature_extraction.py' 2020-05-14T12:23:23,486 adding 'pals/loader.py' 2020-05-14T12:23:23,489 adding 'pals/noise.py' 2020-05-14T12:23:23,492 adding 'pals/pimp_tools.py' 2020-05-14T12:23:23,496 adding 'pals/reactome.py' 2020-05-14T12:23:23,499 adding 'pals/run.py' 2020-05-14T12:23:23,502 adding 'pals/run_gui.py' 2020-05-14T12:23:23,506 adding 'pals/run_gui_gnps.py' 2020-05-14T12:23:23,511 adding 'pals/run_gui_pathway.py' 2020-05-14T12:23:23,513 adding 'pals/session_state.py' 2020-05-14T12:23:23,554 adding 'pals/data/COMPOUND.json.zip' 2020-05-14T12:23:23,873 adding 'pals/data/ChEBI.json.zip' 2020-05-14T12:23:23,942 adding 'pals/data/PiMP_KEGG.json.zip' 2020-05-14T12:23:23,988 adding 'pals/data/reactome/metabolic_pathways/COMPOUND/Arabidopsis thaliana.json.zip' 2020-05-14T12:23:24,032 adding 'pals/data/reactome/metabolic_pathways/COMPOUND/Bos taurus.json.zip' 2020-05-14T12:23:24,075 adding 'pals/data/reactome/metabolic_pathways/COMPOUND/Caenorhabditis elegans.json.zip' 2020-05-14T12:23:24,119 adding 'pals/data/reactome/metabolic_pathways/COMPOUND/Canis familiaris.json.zip' 2020-05-14T12:23:24,162 adding 'pals/data/reactome/metabolic_pathways/COMPOUND/Danio rerio.json.zip' 2020-05-14T12:23:24,205 adding 'pals/data/reactome/metabolic_pathways/COMPOUND/Dictyostelium discoideum.json.zip' 2020-05-14T12:23:24,248 adding 'pals/data/reactome/metabolic_pathways/COMPOUND/Drosophila melanogaster.json.zip' 2020-05-14T12:23:24,292 adding 'pals/data/reactome/metabolic_pathways/COMPOUND/Gallus gallus.json.zip' 2020-05-14T12:23:24,335 adding 'pals/data/reactome/metabolic_pathways/COMPOUND/Homo sapiens.json.zip' 2020-05-14T12:23:24,379 adding 'pals/data/reactome/metabolic_pathways/COMPOUND/Mus musculus.json.zip' 2020-05-14T12:23:24,422 adding 'pals/data/reactome/metabolic_pathways/COMPOUND/Oryza sativa.json.zip' 2020-05-14T12:23:24,464 adding 'pals/data/reactome/metabolic_pathways/COMPOUND/Plasmodium falciparum.json.zip' 2020-05-14T12:23:24,508 adding 'pals/data/reactome/metabolic_pathways/COMPOUND/Rattus norvegicus.json.zip' 2020-05-14T12:23:24,551 adding 'pals/data/reactome/metabolic_pathways/COMPOUND/Saccharomyces cerevisiae.json.zip' 2020-05-14T12:23:24,594 adding 'pals/data/reactome/metabolic_pathways/COMPOUND/Schizosaccharomyces pombe.json.zip' 2020-05-14T12:23:24,637 adding 'pals/data/reactome/metabolic_pathways/COMPOUND/Sus scrofa.json.zip' 2020-05-14T12:23:24,680 adding 'pals/data/reactome/metabolic_pathways/COMPOUND/Taeniopygia guttata.json.zip' 2020-05-14T12:23:24,724 adding 'pals/data/reactome/metabolic_pathways/COMPOUND/Xenopus tropicalis.json.zip' 2020-05-14T12:23:25,046 adding 'pals/data/reactome/metabolic_pathways/ChEBI/Arabidopsis thaliana.json.zip' 2020-05-14T12:23:25,386 adding 'pals/data/reactome/metabolic_pathways/ChEBI/Bos taurus.json.zip' 2020-05-14T12:23:25,725 adding 'pals/data/reactome/metabolic_pathways/ChEBI/Caenorhabditis elegans.json.zip' 2020-05-14T12:23:26,065 adding 'pals/data/reactome/metabolic_pathways/ChEBI/Canis familiaris.json.zip' 2020-05-14T12:23:26,406 adding 'pals/data/reactome/metabolic_pathways/ChEBI/Danio rerio.json.zip' 2020-05-14T12:23:26,745 adding 'pals/data/reactome/metabolic_pathways/ChEBI/Dictyostelium discoideum.json.zip' 2020-05-14T12:23:27,084 adding 'pals/data/reactome/metabolic_pathways/ChEBI/Drosophila melanogaster.json.zip' 2020-05-14T12:23:27,426 adding 'pals/data/reactome/metabolic_pathways/ChEBI/Gallus gallus.json.zip' 2020-05-14T12:23:27,785 adding 'pals/data/reactome/metabolic_pathways/ChEBI/Homo sapiens.json.zip' 2020-05-14T12:23:28,152 adding 'pals/data/reactome/metabolic_pathways/ChEBI/Mus musculus.json.zip' 2020-05-14T12:23:28,502 adding 'pals/data/reactome/metabolic_pathways/ChEBI/Oryza sativa.json.zip' 2020-05-14T12:23:28,841 adding 'pals/data/reactome/metabolic_pathways/ChEBI/Plasmodium falciparum.json.zip' 2020-05-14T12:23:29,182 adding 'pals/data/reactome/metabolic_pathways/ChEBI/Rattus norvegicus.json.zip' 2020-05-14T12:23:29,522 adding 'pals/data/reactome/metabolic_pathways/ChEBI/Saccharomyces cerevisiae.json.zip' 2020-05-14T12:23:29,861 adding 'pals/data/reactome/metabolic_pathways/ChEBI/Schizosaccharomyces pombe.json.zip' 2020-05-14T12:23:30,202 adding 'pals/data/reactome/metabolic_pathways/ChEBI/Sus scrofa.json.zip' 2020-05-14T12:23:30,543 adding 'pals/data/reactome/metabolic_pathways/ChEBI/Taeniopygia guttata.json.zip' 2020-05-14T12:23:30,884 adding 'pals/data/reactome/metabolic_pathways/ChEBI/Xenopus tropicalis.json.zip' 2020-05-14T12:23:30,907 adding 'PALS_pathway-1.3.0.dist-info/METADATA' 2020-05-14T12:23:30,909 adding 'PALS_pathway-1.3.0.dist-info/WHEEL' 2020-05-14T12:23:30,911 adding 'PALS_pathway-1.3.0.dist-info/top_level.txt' 2020-05-14T12:23:30,913 adding 'PALS_pathway-1.3.0.dist-info/RECORD' 2020-05-14T12:23:34,217 removing build/bdist.linux-armv7l/wheel 2020-05-14T12:23:34,422 Building wheel for PALS-pathway (setup.py): finished with status 'done' 2020-05-14T12:23:34,975 Created wheel for PALS-pathway: filename=PALS_pathway-1.3.0-py3-none-any.whl size=38129320 sha256=0c436dc0095225e63b30bb97782f562c9c801c46d498e18df11018d928866bb7 2020-05-14T12:23:34,975 Stored in directory: /tmp/pip-ephem-wheel-cache-5j3g0dts/wheels/bb/d6/fb/94a1d96e9fd3deee0e70bd316ada9f252f824db0ed8e1c277e 2020-05-14T12:23:34,979 Successfully built PALS-pathway 2020-05-14T12:23:41,585 Removed build tracker: '/tmp/pip-req-tracker-voz2afnw'