2020-06-04T11:24:11,006 Created temporary directory: /tmp/pip-ephem-wheel-cache-lb8lguz8
2020-06-04T11:24:11,011 Created temporary directory: /tmp/pip-req-tracker-q1uwpf0b
2020-06-04T11:24:11,012 Initialized build tracking at /tmp/pip-req-tracker-q1uwpf0b
2020-06-04T11:24:11,014 Created build tracker: /tmp/pip-req-tracker-q1uwpf0b
2020-06-04T11:24:11,014 Entered build tracker: /tmp/pip-req-tracker-q1uwpf0b
2020-06-04T11:24:11,016 Created temporary directory: /tmp/pip-wheel-j68rxklh
2020-06-04T11:24:11,033 1 location(s) to search for versions of scipion-em-xmipptomo:
2020-06-04T11:24:11,033 * https://pypi.org/simple/scipion-em-xmipptomo/
2020-06-04T11:24:11,034 Fetching project page and analyzing links: https://pypi.org/simple/scipion-em-xmipptomo/
2020-06-04T11:24:11,036 Getting page https://pypi.org/simple/scipion-em-xmipptomo/
2020-06-04T11:24:11,040 Found index url https://pypi.org/simple
2020-06-04T11:24:11,264   Found link https://files.pythonhosted.org/packages/0a/3b/99c04d2021d8c57dcad19a7972247afbaa319d8f92ebe0ccc5fe1537e0eb/scipion-em-xmipptomo-3.0.1.tar.gz#sha256=70975701dbc45f8ca4b658308270b8416ef7bb277204dfc82ad6d26e4727b999 (from https://pypi.org/simple/scipion-em-xmipptomo/), version: 3.0.1
2020-06-04T11:24:11,274 Given no hashes to check 1 links for project 'scipion-em-xmipptomo': discarding no candidates
2020-06-04T11:24:11,275 Using version 3.0.1 (newest of versions: 3.0.1)
2020-06-04T11:24:11,282 Collecting scipion-em-xmipptomo==3.0.1
2020-06-04T11:24:11,287   Created temporary directory: /tmp/pip-unpack-1du3ct7m
2020-06-04T11:24:11,383   Downloading scipion-em-xmipptomo-3.0.1.tar.gz (130 kB)
2020-06-04T11:24:11,646   Added scipion-em-xmipptomo==3.0.1 from https://files.pythonhosted.org/packages/0a/3b/99c04d2021d8c57dcad19a7972247afbaa319d8f92ebe0ccc5fe1537e0eb/scipion-em-xmipptomo-3.0.1.tar.gz#sha256=70975701dbc45f8ca4b658308270b8416ef7bb277204dfc82ad6d26e4727b999 to build tracker '/tmp/pip-req-tracker-q1uwpf0b'
2020-06-04T11:24:11,650     Running setup.py (path:/tmp/pip-wheel-j68rxklh/scipion-em-xmipptomo/setup.py) egg_info for package scipion-em-xmipptomo
2020-06-04T11:24:11,652     Created temporary directory: /tmp/pip-pip-egg-info-bqei9d0w
2020-06-04T11:24:11,653     Running command python setup.py egg_info
2020-06-04T11:24:14,010     running egg_info
2020-06-04T11:24:14,017     creating /tmp/pip-pip-egg-info-bqei9d0w/scipion_em_xmipptomo.egg-info
2020-06-04T11:24:14,020     writing dependency_links to /tmp/pip-pip-egg-info-bqei9d0w/scipion_em_xmipptomo.egg-info/dependency_links.txt
2020-06-04T11:24:14,023     writing top-level names to /tmp/pip-pip-egg-info-bqei9d0w/scipion_em_xmipptomo.egg-info/top_level.txt
2020-06-04T11:24:14,025     writing /tmp/pip-pip-egg-info-bqei9d0w/scipion_em_xmipptomo.egg-info/PKG-INFO
2020-06-04T11:24:14,031     writing requirements to /tmp/pip-pip-egg-info-bqei9d0w/scipion_em_xmipptomo.egg-info/requires.txt
2020-06-04T11:24:14,034     writing entry points to /tmp/pip-pip-egg-info-bqei9d0w/scipion_em_xmipptomo.egg-info/entry_points.txt
2020-06-04T11:24:14,041     writing manifest file '/tmp/pip-pip-egg-info-bqei9d0w/scipion_em_xmipptomo.egg-info/SOURCES.txt'
2020-06-04T11:24:14,421     reading manifest file '/tmp/pip-pip-egg-info-bqei9d0w/scipion_em_xmipptomo.egg-info/SOURCES.txt'
2020-06-04T11:24:14,424     reading manifest template 'MANIFEST.in'
2020-06-04T11:24:14,436     writing manifest file '/tmp/pip-pip-egg-info-bqei9d0w/scipion_em_xmipptomo.egg-info/SOURCES.txt'
2020-06-04T11:24:14,576   Source in /tmp/pip-wheel-j68rxklh/scipion-em-xmipptomo has version 3.0.1, which satisfies requirement scipion-em-xmipptomo==3.0.1 from https://files.pythonhosted.org/packages/0a/3b/99c04d2021d8c57dcad19a7972247afbaa319d8f92ebe0ccc5fe1537e0eb/scipion-em-xmipptomo-3.0.1.tar.gz#sha256=70975701dbc45f8ca4b658308270b8416ef7bb277204dfc82ad6d26e4727b999
2020-06-04T11:24:14,578   Removed scipion-em-xmipptomo==3.0.1 from https://files.pythonhosted.org/packages/0a/3b/99c04d2021d8c57dcad19a7972247afbaa319d8f92ebe0ccc5fe1537e0eb/scipion-em-xmipptomo-3.0.1.tar.gz#sha256=70975701dbc45f8ca4b658308270b8416ef7bb277204dfc82ad6d26e4727b999 from build tracker '/tmp/pip-req-tracker-q1uwpf0b'
2020-06-04T11:24:14,582 Building wheels for collected packages: scipion-em-xmipptomo
2020-06-04T11:24:14,593   Created temporary directory: /tmp/pip-wheel-6tkpsluo
2020-06-04T11:24:14,594   Building wheel for scipion-em-xmipptomo (setup.py): started
2020-06-04T11:24:14,595   Destination directory: /tmp/pip-wheel-6tkpsluo
2020-06-04T11:24:14,596   Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-j68rxklh/scipion-em-xmipptomo/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-j68rxklh/scipion-em-xmipptomo/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-6tkpsluo
2020-06-04T11:24:16,938   running bdist_wheel
2020-06-04T11:24:16,955   running build
2020-06-04T11:24:16,955   running build_py
2020-06-04T11:24:17,301   creating build
2020-06-04T11:24:17,302   creating build/lib
2020-06-04T11:24:17,304   creating build/lib/xmipptomo
2020-06-04T11:24:17,307   copying xmipptomo/bibtex.py -> build/lib/xmipptomo
2020-06-04T11:24:17,312   copying xmipptomo/wizards.py -> build/lib/xmipptomo
2020-06-04T11:24:17,316   copying xmipptomo/__init__.py -> build/lib/xmipptomo
2020-06-04T11:24:17,323   creating build/lib/xmipptomo/viewers
2020-06-04T11:24:17,325   copying xmipptomo/viewers/viewer_cltomo.py -> build/lib/xmipptomo/viewers
2020-06-04T11:24:17,331   copying xmipptomo/viewers/__init__.py -> build/lib/xmipptomo/viewers
2020-06-04T11:24:17,339   creating build/lib/xmipptomo/tests
2020-06-04T11:24:17,342   copying xmipptomo/tests/test_protocols_xmipptomo.py -> build/lib/xmipptomo/tests
2020-06-04T11:24:17,351   copying xmipptomo/tests/__init__.py -> build/lib/xmipptomo/tests
2020-06-04T11:24:17,360   creating build/lib/xmipptomo/protocols
2020-06-04T11:24:17,363   copying xmipptomo/protocols/protocol_cltomo.py -> build/lib/xmipptomo/protocols
2020-06-04T11:24:17,372   copying xmipptomo/protocols/protocol_project_top.py -> build/lib/xmipptomo/protocols
2020-06-04T11:24:17,380   copying xmipptomo/protocols/protocol_phantom_subtomo.py -> build/lib/xmipptomo/protocols
2020-06-04T11:24:17,388   copying xmipptomo/protocols/protocol_randomMisalignment.py -> build/lib/xmipptomo/protocols
2020-06-04T11:24:17,396   copying xmipptomo/protocols/protocol_roiIJ.py -> build/lib/xmipptomo/protocols
2020-06-04T11:24:17,403   copying xmipptomo/protocols/protocol_coords_roi.py -> build/lib/xmipptomo/protocols
2020-06-04T11:24:17,411   copying xmipptomo/protocols/protocol_subtomo_map_back.py -> build/lib/xmipptomo/protocols
2020-06-04T11:24:17,418   copying xmipptomo/protocols/__init__.py -> build/lib/xmipptomo/protocols
2020-06-04T11:24:17,425   copying xmipptomo/protocols/protocol_connected_components.py -> build/lib/xmipptomo/protocols
2020-06-04T11:24:17,432   copying xmipptomo/protocols/protocol_apply_alignment_subtomo.py -> build/lib/xmipptomo/protocols
2020-06-04T11:24:17,442   copying xmipptomo/xmipp_logo.png -> build/lib/xmipptomo
2020-06-04T11:24:17,460   copying xmipptomo/protocols.conf -> build/lib/xmipptomo
2020-06-04T11:24:17,487   installing to build/bdist.linux-armv7l/wheel
2020-06-04T11:24:17,489   running install
2020-06-04T11:24:17,492   running install_lib
2020-06-04T11:24:17,501   creating build/bdist.linux-armv7l
2020-06-04T11:24:17,502   creating build/bdist.linux-armv7l/wheel
2020-06-04T11:24:17,507   creating build/bdist.linux-armv7l/wheel/xmipptomo
2020-06-04T11:24:17,510   copying build/lib/xmipptomo/bibtex.py -> build/bdist.linux-armv7l/wheel/xmipptomo
2020-06-04T11:24:17,515   copying build/lib/xmipptomo/protocols.conf -> build/bdist.linux-armv7l/wheel/xmipptomo
2020-06-04T11:24:17,523   creating build/bdist.linux-armv7l/wheel/xmipptomo/viewers
2020-06-04T11:24:17,526   copying build/lib/xmipptomo/viewers/viewer_cltomo.py -> build/bdist.linux-armv7l/wheel/xmipptomo/viewers
2020-06-04T11:24:17,534   copying build/lib/xmipptomo/viewers/__init__.py -> build/bdist.linux-armv7l/wheel/xmipptomo/viewers
2020-06-04T11:24:17,540   copying build/lib/xmipptomo/wizards.py -> build/bdist.linux-armv7l/wheel/xmipptomo
2020-06-04T11:24:17,548   creating build/bdist.linux-armv7l/wheel/xmipptomo/tests
2020-06-04T11:24:17,551   copying build/lib/xmipptomo/tests/test_protocols_xmipptomo.py -> build/bdist.linux-armv7l/wheel/xmipptomo/tests
2020-06-04T11:24:17,559   copying build/lib/xmipptomo/tests/__init__.py -> build/bdist.linux-armv7l/wheel/xmipptomo/tests
2020-06-04T11:24:17,565   copying build/lib/xmipptomo/__init__.py -> build/bdist.linux-armv7l/wheel/xmipptomo
2020-06-04T11:24:17,572   copying build/lib/xmipptomo/xmipp_logo.png -> build/bdist.linux-armv7l/wheel/xmipptomo
2020-06-04T11:24:17,590   creating build/bdist.linux-armv7l/wheel/xmipptomo/protocols
2020-06-04T11:24:17,593   copying build/lib/xmipptomo/protocols/protocol_cltomo.py -> build/bdist.linux-armv7l/wheel/xmipptomo/protocols
2020-06-04T11:24:17,600   copying build/lib/xmipptomo/protocols/protocol_project_top.py -> build/bdist.linux-armv7l/wheel/xmipptomo/protocols
2020-06-04T11:24:17,606   copying build/lib/xmipptomo/protocols/protocol_phantom_subtomo.py -> build/bdist.linux-armv7l/wheel/xmipptomo/protocols
2020-06-04T11:24:17,612   copying build/lib/xmipptomo/protocols/protocol_randomMisalignment.py -> build/bdist.linux-armv7l/wheel/xmipptomo/protocols
2020-06-04T11:24:17,619   copying build/lib/xmipptomo/protocols/protocol_roiIJ.py -> build/bdist.linux-armv7l/wheel/xmipptomo/protocols
2020-06-04T11:24:17,627   copying build/lib/xmipptomo/protocols/protocol_coords_roi.py -> build/bdist.linux-armv7l/wheel/xmipptomo/protocols
2020-06-04T11:24:17,634   copying build/lib/xmipptomo/protocols/protocol_subtomo_map_back.py -> build/bdist.linux-armv7l/wheel/xmipptomo/protocols
2020-06-04T11:24:17,642   copying build/lib/xmipptomo/protocols/__init__.py -> build/bdist.linux-armv7l/wheel/xmipptomo/protocols
2020-06-04T11:24:17,648   copying build/lib/xmipptomo/protocols/protocol_connected_components.py -> build/bdist.linux-armv7l/wheel/xmipptomo/protocols
2020-06-04T11:24:17,655   copying build/lib/xmipptomo/protocols/protocol_apply_alignment_subtomo.py -> build/bdist.linux-armv7l/wheel/xmipptomo/protocols
2020-06-04T11:24:17,662   running install_egg_info
2020-06-04T11:24:17,714   running egg_info
2020-06-04T11:24:17,715   writing requirements to scipion_em_xmipptomo.egg-info/requires.txt
2020-06-04T11:24:17,718   writing dependency_links to scipion_em_xmipptomo.egg-info/dependency_links.txt
2020-06-04T11:24:17,721   writing top-level names to scipion_em_xmipptomo.egg-info/top_level.txt
2020-06-04T11:24:17,723   writing entry points to scipion_em_xmipptomo.egg-info/entry_points.txt
2020-06-04T11:24:17,726   writing scipion_em_xmipptomo.egg-info/PKG-INFO
2020-06-04T11:24:17,741   reading manifest file 'scipion_em_xmipptomo.egg-info/SOURCES.txt'
2020-06-04T11:24:17,746   reading manifest template 'MANIFEST.in'
2020-06-04T11:24:17,759   writing manifest file 'scipion_em_xmipptomo.egg-info/SOURCES.txt'
2020-06-04T11:24:17,762   Copying scipion_em_xmipptomo.egg-info to build/bdist.linux-armv7l/wheel/scipion_em_xmipptomo-3.0.1-py3.5.egg-info
2020-06-04T11:24:17,796   running install_scripts
2020-06-04T11:24:17,988   creating build/bdist.linux-armv7l/wheel/scipion_em_xmipptomo-3.0.1.dist-info/WHEEL
2020-06-04T11:24:18,341   Building wheel for scipion-em-xmipptomo (setup.py): finished with status 'done'
2020-06-04T11:24:18,348   Created wheel for scipion-em-xmipptomo: filename=scipion_em_xmipptomo-3.0.1-py3-none-any.whl size=131883 sha256=fbc2f497ddefc373167f50ca1b95de2efcc45b499e624671f6552e959ccda926
2020-06-04T11:24:18,349   Stored in directory: /tmp/pip-ephem-wheel-cache-lb8lguz8/wheels/c5/28/c5/6085ab128ef4d3d5b8ff993654dd04721c183d63e64a6793a1
2020-06-04T11:24:18,353 Successfully built scipion-em-xmipptomo
2020-06-04T11:24:18,383 Removed build tracker: '/tmp/pip-req-tracker-q1uwpf0b'