2020-06-08T22:24:29,746 Created temporary directory: /tmp/pip-ephem-wheel-cache-k5viysd_
2020-06-08T22:24:29,750 Created temporary directory: /tmp/pip-req-tracker-yowbtmnd
2020-06-08T22:24:29,751 Initialized build tracking at /tmp/pip-req-tracker-yowbtmnd
2020-06-08T22:24:29,751 Created build tracker: /tmp/pip-req-tracker-yowbtmnd
2020-06-08T22:24:29,752 Entered build tracker: /tmp/pip-req-tracker-yowbtmnd
2020-06-08T22:24:29,753 Created temporary directory: /tmp/pip-wheel-xe9jjwel
2020-06-08T22:24:29,769 1 location(s) to search for versions of bacphlip:
2020-06-08T22:24:29,769 * https://pypi.org/simple/bacphlip/
2020-06-08T22:24:29,770 Fetching project page and analyzing links: https://pypi.org/simple/bacphlip/
2020-06-08T22:24:29,771 Getting page https://pypi.org/simple/bacphlip/
2020-06-08T22:24:29,773 Found index url https://pypi.org/simple
2020-06-08T22:24:34,990   Found link https://files.pythonhosted.org/packages/2b/74/5e998f583cf6561adca649d8d848c84a9cbf3d0ae7cbb67e729723f4e341/bacphlip-0.9.tar.gz#sha256=9ada32c22ba329e76ddbabefed42fc7d45c307e73e5ec6d8e534a1b4dfa10274 (from https://pypi.org/simple/bacphlip/) (requires-python:>=3.6), version: 0.9
2020-06-08T22:24:34,991   Found link https://files.pythonhosted.org/packages/ae/15/8d3cfb9894d07d399d0f4cfcc24852dee5785545dcc49a4166addf2eec10/bacphlip-0.9.1.tar.gz#sha256=4581c520f2d0c549b2a838589a05737d4a1f4bb30ec3df895d2aaaab8a2192ca (from https://pypi.org/simple/bacphlip/) (requires-python:>=3.6), version: 0.9.1
2020-06-08T22:24:34,992   Found link https://files.pythonhosted.org/packages/63/05/3017fa934dda0aa49c731e5b3ccb8e1e9d5186f8b294d589a61872886bd1/bacphlip-0.9.2.tar.gz#sha256=8071422edfd213218b91271cccd612013e559eb15024e4234e55c96fa5b9eecf (from https://pypi.org/simple/bacphlip/) (requires-python:>=3.6), version: 0.9.2
2020-06-08T22:24:34,993   Found link https://files.pythonhosted.org/packages/88/00/82a56862a892a07da25926d78793d9e85b846268ecefe1f705acfbfe50d9/bacphlip-0.9.3.tar.gz#sha256=c8642a4191b6d638dc795b80ca9aea69a949ad73243b47684a44b39265438093 (from https://pypi.org/simple/bacphlip/) (requires-python:>=3.6), version: 0.9.3
2020-06-08T22:24:34,994   Found link https://files.pythonhosted.org/packages/1d/f7/48ce6f820017bfbf85d735d140aed3c2e17550b19ec322756ecfb9545081/bacphlip-0.9.4.tar.gz#sha256=f4a631f796616066b987650d2d7ab711e5d81f51257c6793a6395a517f36f004 (from https://pypi.org/simple/bacphlip/) (requires-python:>=3.6), version: 0.9.4
2020-06-08T22:24:35,003 Given no hashes to check 1 links for project 'bacphlip': discarding no candidates
2020-06-08T22:24:35,004 Using version 0.9.4 (newest of versions: 0.9.4)
2020-06-08T22:24:35,009 Collecting bacphlip==0.9.4
2020-06-08T22:24:35,012   Created temporary directory: /tmp/pip-unpack-43w7i3nu
2020-06-08T22:24:40,619   Downloading bacphlip-0.9.4.tar.gz (10.2 MB)
2020-06-08T22:24:50,862   Added bacphlip==0.9.4 from https://files.pythonhosted.org/packages/1d/f7/48ce6f820017bfbf85d735d140aed3c2e17550b19ec322756ecfb9545081/bacphlip-0.9.4.tar.gz#sha256=f4a631f796616066b987650d2d7ab711e5d81f51257c6793a6395a517f36f004 to build tracker '/tmp/pip-req-tracker-yowbtmnd'
2020-06-08T22:24:50,863     Running setup.py (path:/tmp/pip-wheel-xe9jjwel/bacphlip/setup.py) egg_info for package bacphlip
2020-06-08T22:24:50,865     Created temporary directory: /tmp/pip-pip-egg-info-wnbetaoa
2020-06-08T22:24:50,865     Running command python setup.py egg_info
2020-06-08T22:24:52,609     running egg_info
2020-06-08T22:24:52,614     creating /tmp/pip-pip-egg-info-wnbetaoa/bacphlip.egg-info
2020-06-08T22:24:52,616     writing /tmp/pip-pip-egg-info-wnbetaoa/bacphlip.egg-info/PKG-INFO
2020-06-08T22:24:52,622     writing dependency_links to /tmp/pip-pip-egg-info-wnbetaoa/bacphlip.egg-info/dependency_links.txt
2020-06-08T22:24:52,625     writing entry points to /tmp/pip-pip-egg-info-wnbetaoa/bacphlip.egg-info/entry_points.txt
2020-06-08T22:24:52,628     writing requirements to /tmp/pip-pip-egg-info-wnbetaoa/bacphlip.egg-info/requires.txt
2020-06-08T22:24:52,630     writing top-level names to /tmp/pip-pip-egg-info-wnbetaoa/bacphlip.egg-info/top_level.txt
2020-06-08T22:24:52,633     writing manifest file '/tmp/pip-pip-egg-info-wnbetaoa/bacphlip.egg-info/SOURCES.txt'
2020-06-08T22:24:52,934     reading manifest file '/tmp/pip-pip-egg-info-wnbetaoa/bacphlip.egg-info/SOURCES.txt'
2020-06-08T22:24:52,937     reading manifest template 'MANIFEST.in'
2020-06-08T22:24:52,954     writing manifest file '/tmp/pip-pip-egg-info-wnbetaoa/bacphlip.egg-info/SOURCES.txt'
2020-06-08T22:24:53,073   Source in /tmp/pip-wheel-xe9jjwel/bacphlip has version 0.9.4, which satisfies requirement bacphlip==0.9.4 from https://files.pythonhosted.org/packages/1d/f7/48ce6f820017bfbf85d735d140aed3c2e17550b19ec322756ecfb9545081/bacphlip-0.9.4.tar.gz#sha256=f4a631f796616066b987650d2d7ab711e5d81f51257c6793a6395a517f36f004
2020-06-08T22:24:53,074   Removed bacphlip==0.9.4 from https://files.pythonhosted.org/packages/1d/f7/48ce6f820017bfbf85d735d140aed3c2e17550b19ec322756ecfb9545081/bacphlip-0.9.4.tar.gz#sha256=f4a631f796616066b987650d2d7ab711e5d81f51257c6793a6395a517f36f004 from build tracker '/tmp/pip-req-tracker-yowbtmnd'
2020-06-08T22:24:53,079 Building wheels for collected packages: bacphlip
2020-06-08T22:24:53,088   Created temporary directory: /tmp/pip-wheel-9b7w14qi
2020-06-08T22:24:53,089   Building wheel for bacphlip (setup.py): started
2020-06-08T22:24:53,089   Destination directory: /tmp/pip-wheel-9b7w14qi
2020-06-08T22:24:53,090   Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-xe9jjwel/bacphlip/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-xe9jjwel/bacphlip/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-9b7w14qi
2020-06-08T22:24:54,839   running bdist_wheel
2020-06-08T22:24:54,852   running build
2020-06-08T22:24:54,853   running build_py
2020-06-08T22:24:55,131   creating build
2020-06-08T22:24:55,131   creating build/lib
2020-06-08T22:24:55,133   creating build/lib/bacphlip
2020-06-08T22:24:55,135   copying bacphlip/__init__.py -> build/lib/bacphlip
2020-06-08T22:24:55,139   copying bacphlip/__main__.py -> build/lib/bacphlip
2020-06-08T22:24:55,143   copying bacphlip/command_line.py -> build/lib/bacphlip
2020-06-08T22:24:55,146   copying bacphlip/bacphlip.py -> build/lib/bacphlip
2020-06-08T22:24:55,151   running egg_info
2020-06-08T22:24:55,174   writing bacphlip.egg-info/PKG-INFO
2020-06-08T22:24:55,179   writing dependency_links to bacphlip.egg-info/dependency_links.txt
2020-06-08T22:24:55,183   writing entry points to bacphlip.egg-info/entry_points.txt
2020-06-08T22:24:55,185   writing requirements to bacphlip.egg-info/requires.txt
2020-06-08T22:24:55,187   writing top-level names to bacphlip.egg-info/top_level.txt
2020-06-08T22:24:55,196   reading manifest file 'bacphlip.egg-info/SOURCES.txt'
2020-06-08T22:24:55,200   reading manifest template 'MANIFEST.in'
2020-06-08T22:24:55,221   writing manifest file 'bacphlip.egg-info/SOURCES.txt'
2020-06-08T22:24:55,226   creating build/lib/bacphlip/data
2020-06-08T22:24:55,228   copying bacphlip/data/prot_models.hmm -> build/lib/bacphlip/data
2020-06-08T22:25:00,707   copying bacphlip/data/rf_best.joblib -> build/lib/bacphlip/data
2020-06-08T22:25:00,799   creating build/lib/bacphlip/data/example_data
2020-06-08T22:25:00,801   copying bacphlip/data/example_data/genome_example.fasta -> build/lib/bacphlip/data/example_data
2020-06-08T22:25:00,811   copying bacphlip/data/example_data/genome_example.fasta.6frame -> build/lib/bacphlip/data/example_data
2020-06-08T22:25:00,822   copying bacphlip/data/example_data/genome_example.fasta.bacphlip -> build/lib/bacphlip/data/example_data
2020-06-08T22:25:00,828   copying bacphlip/data/example_data/genome_example.fasta.hmmsearch -> build/lib/bacphlip/data/example_data
2020-06-08T22:25:00,858   copying bacphlip/data/example_data/genome_example.fasta.hmmsearch.tsv -> build/lib/bacphlip/data/example_data
2020-06-08T22:25:00,870   installing to build/bdist.linux-armv7l/wheel
2020-06-08T22:25:00,870   running install
2020-06-08T22:25:00,873   running install_lib
2020-06-08T22:25:00,884   creating build/bdist.linux-armv7l
2020-06-08T22:25:00,885   creating build/bdist.linux-armv7l/wheel
2020-06-08T22:25:00,890   creating build/bdist.linux-armv7l/wheel/bacphlip
2020-06-08T22:25:00,892   copying build/lib/bacphlip/__init__.py -> build/bdist.linux-armv7l/wheel/bacphlip
2020-06-08T22:25:00,896   copying build/lib/bacphlip/__main__.py -> build/bdist.linux-armv7l/wheel/bacphlip
2020-06-08T22:25:00,901   creating build/bdist.linux-armv7l/wheel/bacphlip/data
2020-06-08T22:25:00,903   copying build/lib/bacphlip/data/rf_best.joblib -> build/bdist.linux-armv7l/wheel/bacphlip/data
2020-06-08T22:25:00,998   creating build/bdist.linux-armv7l/wheel/bacphlip/data/example_data
2020-06-08T22:25:01,000   copying build/lib/bacphlip/data/example_data/genome_example.fasta.hmmsearch.tsv -> build/bdist.linux-armv7l/wheel/bacphlip/data/example_data
2020-06-08T22:25:01,006   copying build/lib/bacphlip/data/example_data/genome_example.fasta.6frame -> build/bdist.linux-armv7l/wheel/bacphlip/data/example_data
2020-06-08T22:25:01,017   copying build/lib/bacphlip/data/example_data/genome_example.fasta.hmmsearch -> build/bdist.linux-armv7l/wheel/bacphlip/data/example_data
2020-06-08T22:25:01,046   copying build/lib/bacphlip/data/example_data/genome_example.fasta.bacphlip -> build/bdist.linux-armv7l/wheel/bacphlip/data/example_data
2020-06-08T22:25:01,050   copying build/lib/bacphlip/data/example_data/genome_example.fasta -> build/bdist.linux-armv7l/wheel/bacphlip/data/example_data
2020-06-08T22:25:01,059   copying build/lib/bacphlip/data/prot_models.hmm -> build/bdist.linux-armv7l/wheel/bacphlip/data
2020-06-08T22:25:06,568   copying build/lib/bacphlip/command_line.py -> build/bdist.linux-armv7l/wheel/bacphlip
2020-06-08T22:25:06,572   copying build/lib/bacphlip/bacphlip.py -> build/bdist.linux-armv7l/wheel/bacphlip
2020-06-08T22:25:06,577   running install_egg_info
2020-06-08T22:25:06,592   Copying bacphlip.egg-info to build/bdist.linux-armv7l/wheel/bacphlip-0.9.4-py3.7.egg-info
2020-06-08T22:25:06,622   running install_scripts
2020-06-08T22:25:06,778   adding license file "LICENSE.txt" (matched pattern "LICEN[CS]E*")
2020-06-08T22:25:06,790   creating build/bdist.linux-armv7l/wheel/bacphlip-0.9.4.dist-info/WHEEL
2020-06-08T22:25:06,795   creating '/tmp/pip-wheel-9b7w14qi/bacphlip-0.9.4-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2020-06-08T22:25:06,799   adding 'bacphlip/__init__.py'
2020-06-08T22:25:06,802   adding 'bacphlip/__main__.py'
2020-06-08T22:25:06,805   adding 'bacphlip/bacphlip.py'
2020-06-08T22:25:06,808   adding 'bacphlip/command_line.py'
2020-06-08T22:25:20,967   adding 'bacphlip/data/prot_models.hmm'
2020-06-08T22:25:21,830   adding 'bacphlip/data/rf_best.joblib'
2020-06-08T22:25:21,872   adding 'bacphlip/data/example_data/genome_example.fasta'
2020-06-08T22:25:21,884   adding 'bacphlip/data/example_data/genome_example.fasta.6frame'
2020-06-08T22:25:21,887   adding 'bacphlip/data/example_data/genome_example.fasta.bacphlip'
2020-06-08T22:25:21,904   adding 'bacphlip/data/example_data/genome_example.fasta.hmmsearch'
2020-06-08T22:25:21,910   adding 'bacphlip/data/example_data/genome_example.fasta.hmmsearch.tsv'
2020-06-08T22:25:21,915   adding 'bacphlip-0.9.4.dist-info/LICENSE.txt'
2020-06-08T22:25:21,918   adding 'bacphlip-0.9.4.dist-info/METADATA'
2020-06-08T22:25:21,920   adding 'bacphlip-0.9.4.dist-info/WHEEL'
2020-06-08T22:25:21,921   adding 'bacphlip-0.9.4.dist-info/entry_points.txt'
2020-06-08T22:25:21,923   adding 'bacphlip-0.9.4.dist-info/top_level.txt'
2020-06-08T22:25:21,924   adding 'bacphlip-0.9.4.dist-info/RECORD'
2020-06-08T22:25:22,823   removing build/bdist.linux-armv7l/wheel
2020-06-08T22:25:23,012   Building wheel for bacphlip (setup.py): finished with status 'done'
2020-06-08T22:25:23,165   Created wheel for bacphlip: filename=bacphlip-0.9.4-py3-none-any.whl size=10359409 sha256=ad602cf2c35609b47268faab5bbb600ab0e3dd5d4dc6a31f6a167a8b6553f17d
2020-06-08T22:25:23,166   Stored in directory: /tmp/pip-ephem-wheel-cache-k5viysd_/wheels/12/72/6c/3f5fa7f554f9c2fbfef76e19b733dda5bf88f520324386f54d
2020-06-08T22:25:23,170 Successfully built bacphlip
2020-06-08T22:25:24,980 Removed build tracker: '/tmp/pip-req-tracker-yowbtmnd'