2020-06-09T17:01:22,387 Created temporary directory: /tmp/pip-ephem-wheel-cache-mivtpw1l 2020-06-09T17:01:22,392 Created temporary directory: /tmp/pip-req-tracker-7gvyn0km 2020-06-09T17:01:22,393 Initialized build tracking at /tmp/pip-req-tracker-7gvyn0km 2020-06-09T17:01:22,395 Created build tracker: /tmp/pip-req-tracker-7gvyn0km 2020-06-09T17:01:22,395 Entered build tracker: /tmp/pip-req-tracker-7gvyn0km 2020-06-09T17:01:22,396 Created temporary directory: /tmp/pip-wheel-_o8r91f3 2020-06-09T17:01:22,415 1 location(s) to search for versions of starpolymers: 2020-06-09T17:01:22,415 * https://pypi.org/simple/starpolymers/ 2020-06-09T17:01:22,416 Fetching project page and analyzing links: https://pypi.org/simple/starpolymers/ 2020-06-09T17:01:22,418 Getting page https://pypi.org/simple/starpolymers/ 2020-06-09T17:01:22,422 Found index url https://pypi.org/simple 2020-06-09T17:01:22,659 Link requires a different Python (3.5.3 not in: '~=2.7'): https://files.pythonhosted.org/packages/21/4c/9891e969c617755881aae677c25c84992ecdb9accb1daa7e5427da67d343/starpolymers-1.0.1.tar.gz#sha256=c789ea2fe692e6961eed004aee51b6c56fb30f82b382e7b7ffb07c4307ebebf4 (from https://pypi.org/simple/starpolymers/) (requires-python:~=2.7) 2020-06-09T17:01:22,660 Skipping link: No binaries permitted for starpolymers: https://files.pythonhosted.org/packages/a7/df/83646ca53a5ea76c4027258e30b98960e6d58fad5f1b88c5c1d12a1d2d20/starpolymers-1.1.0-py2-none-any.whl#sha256=0c5ec58038741b8ad8b36aebdcc29cae4a1542cedded80119a521b2f0961dcb0 (from https://pypi.org/simple/starpolymers/) (requires-python:~=2.7) 2020-06-09T17:01:22,661 Link requires a different Python (3.5.3 not in: '~=2.7'): https://files.pythonhosted.org/packages/e5/ec/f53ccfbab2e37d3514fb5a13bd17463d70711186cfcb96be5758add7d70c/starpolymers-1.1.0.tar.gz#sha256=095b7615ae68f0937a695c570b284c617f62bf7b1f5d3ac607219327639d0b20 (from https://pypi.org/simple/starpolymers/) (requires-python:~=2.7) 2020-06-09T17:01:22,662 Skipping link: No binaries permitted for starpolymers: https://files.pythonhosted.org/packages/a2/05/3bf01d011f8ffc239d6cd1945b4f1c463b65687e5302cdc6616701e8137f/starpolymers-1.1.1-py2-none-any.whl#sha256=f9218f85f55a6e699d451865ffc360fe07abfbc5e0902056187506694f481d5c (from https://pypi.org/simple/starpolymers/) (requires-python:~=2.7) 2020-06-09T17:01:22,664 Link requires a different Python (3.5.3 not in: '~=2.7'): https://files.pythonhosted.org/packages/26/a0/9caa7139b21fddf8f3055ab090325402145437ae2f72bc81accd8f08af9d/starpolymers-1.1.1.tar.gz#sha256=59a0023499ee51a18c9b5062ec94e7a82afb3a2950446ace1109842bffcd6d94 (from https://pypi.org/simple/starpolymers/) (requires-python:~=2.7) 2020-06-09T17:01:22,665 Skipping link: No binaries permitted for starpolymers: https://files.pythonhosted.org/packages/18/f8/64b8248415e169793d4576ed3030f71187de933764a6f2e143a54c3f28f9/starpolymers-1.1.2-py2-none-any.whl#sha256=a7902dd10b048dc83ce365b403f8951c015456a203928086687fae058474d958 (from https://pypi.org/simple/starpolymers/) (requires-python:~=2.7) 2020-06-09T17:01:22,666 Link requires a different Python (3.5.3 not in: '~=2.7'): https://files.pythonhosted.org/packages/0c/2c/25e3663b8f79f21607be9c1fc26e10ab1f30fcec83b3b671a6753ccd8ee3/starpolymers-1.1.2.tar.gz#sha256=222ae55d8d4ba25c22537b426d874130344f3934beeb730afa12e2fcd69ab7da (from https://pypi.org/simple/starpolymers/) (requires-python:~=2.7) 2020-06-09T17:01:22,667 Skipping link: No binaries permitted for starpolymers: https://files.pythonhosted.org/packages/cc/c4/bdb3b38265df39028cce77f09842b3fa5e96d99a53f418d10f5759ceb428/starpolymers-2.0.0-py3-none-any.whl#sha256=9f9995b99c715b32e46d2e0b4df72676f4a51bb063bb5669e29bdf8a95bd844c (from https://pypi.org/simple/starpolymers/) (requires-python:>=3.5) 2020-06-09T17:01:22,668 Found link https://files.pythonhosted.org/packages/11/ed/784916925ab3e2fd881cec5ce45bdae48dbdd108c8a78ac7ce22fada7e18/starpolymers-2.0.0.tar.gz#sha256=e250232fcab879b100e4ebef5433ecb5a5ec29db4a174dc4bc5b37800167a7a4 (from https://pypi.org/simple/starpolymers/) (requires-python:>=3.5), version: 2.0.0 2020-06-09T17:01:22,678 Given no hashes to check 1 links for project 'starpolymers': discarding no candidates 2020-06-09T17:01:22,679 Using version 2.0.0 (newest of versions: 2.0.0) 2020-06-09T17:01:22,686 Collecting starpolymers==2.0.0 2020-06-09T17:01:22,691 Created temporary directory: /tmp/pip-unpack-w1ftcum0 2020-06-09T17:01:22,923 Downloading starpolymers-2.0.0.tar.gz (31 kB) 2020-06-09T17:01:23,208 Added starpolymers==2.0.0 from https://files.pythonhosted.org/packages/11/ed/784916925ab3e2fd881cec5ce45bdae48dbdd108c8a78ac7ce22fada7e18/starpolymers-2.0.0.tar.gz#sha256=e250232fcab879b100e4ebef5433ecb5a5ec29db4a174dc4bc5b37800167a7a4 to build tracker '/tmp/pip-req-tracker-7gvyn0km' 2020-06-09T17:01:23,210 Running setup.py (path:/tmp/pip-wheel-_o8r91f3/starpolymers/setup.py) egg_info for package starpolymers 2020-06-09T17:01:23,212 Created temporary directory: /tmp/pip-pip-egg-info-39vimcsa 2020-06-09T17:01:23,212 Running command python setup.py egg_info 2020-06-09T17:01:25,467 running egg_info 2020-06-09T17:01:25,474 creating /tmp/pip-pip-egg-info-39vimcsa/starpolymers.egg-info 2020-06-09T17:01:25,477 writing /tmp/pip-pip-egg-info-39vimcsa/starpolymers.egg-info/PKG-INFO 2020-06-09T17:01:25,484 writing top-level names to /tmp/pip-pip-egg-info-39vimcsa/starpolymers.egg-info/top_level.txt 2020-06-09T17:01:25,486 writing dependency_links to /tmp/pip-pip-egg-info-39vimcsa/starpolymers.egg-info/dependency_links.txt 2020-06-09T17:01:25,491 writing manifest file '/tmp/pip-pip-egg-info-39vimcsa/starpolymers.egg-info/SOURCES.txt' 2020-06-09T17:01:25,871 reading manifest file '/tmp/pip-pip-egg-info-39vimcsa/starpolymers.egg-info/SOURCES.txt' 2020-06-09T17:01:25,882 writing manifest file '/tmp/pip-pip-egg-info-39vimcsa/starpolymers.egg-info/SOURCES.txt' 2020-06-09T17:01:26,021 Source in /tmp/pip-wheel-_o8r91f3/starpolymers has version 2.0.0, which satisfies requirement starpolymers==2.0.0 from https://files.pythonhosted.org/packages/11/ed/784916925ab3e2fd881cec5ce45bdae48dbdd108c8a78ac7ce22fada7e18/starpolymers-2.0.0.tar.gz#sha256=e250232fcab879b100e4ebef5433ecb5a5ec29db4a174dc4bc5b37800167a7a4 2020-06-09T17:01:26,023 Removed starpolymers==2.0.0 from https://files.pythonhosted.org/packages/11/ed/784916925ab3e2fd881cec5ce45bdae48dbdd108c8a78ac7ce22fada7e18/starpolymers-2.0.0.tar.gz#sha256=e250232fcab879b100e4ebef5433ecb5a5ec29db4a174dc4bc5b37800167a7a4 from build tracker '/tmp/pip-req-tracker-7gvyn0km' 2020-06-09T17:01:26,028 Building wheels for collected packages: starpolymers 2020-06-09T17:01:26,039 Created temporary directory: /tmp/pip-wheel-1w5te108 2020-06-09T17:01:26,040 Building wheel for starpolymers (setup.py): started 2020-06-09T17:01:26,041 Destination directory: /tmp/pip-wheel-1w5te108 2020-06-09T17:01:26,041 Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-_o8r91f3/starpolymers/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-_o8r91f3/starpolymers/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-1w5te108 2020-06-09T17:01:28,388 running bdist_wheel 2020-06-09T17:01:28,404 running build 2020-06-09T17:01:28,405 running build_py 2020-06-09T17:01:28,754 creating build 2020-06-09T17:01:28,754 creating build/lib 2020-06-09T17:01:28,756 creating build/lib/starpolymers 2020-06-09T17:01:28,759 copying starpolymers/__init__.py -> build/lib/starpolymers 2020-06-09T17:01:28,766 creating build/lib/test 2020-06-09T17:01:28,768 copying test/test_molecules.py -> build/lib/test 2020-06-09T17:01:28,775 copying test/test_generators.py -> build/lib/test 2020-06-09T17:01:28,781 copying test/test_tools.py -> build/lib/test 2020-06-09T17:01:28,787 copying test/test_readers.py -> build/lib/test 2020-06-09T17:01:28,793 copying test/test_analysis.py -> build/lib/test 2020-06-09T17:01:28,797 copying test/__init__.py -> build/lib/test 2020-06-09T17:01:28,802 creating build/lib/starpolymers/molecules 2020-06-09T17:01:28,805 copying starpolymers/molecules/brush.py -> build/lib/starpolymers/molecules 2020-06-09T17:01:28,811 copying starpolymers/molecules/polyelectrolyte.py -> build/lib/starpolymers/molecules 2020-06-09T17:01:28,816 copying starpolymers/molecules/salt.py -> build/lib/starpolymers/molecules 2020-06-09T17:01:28,821 copying starpolymers/molecules/base.py -> build/lib/starpolymers/molecules 2020-06-09T17:01:28,825 copying starpolymers/molecules/__init__.py -> build/lib/starpolymers/molecules 2020-06-09T17:01:28,830 copying starpolymers/molecules/_common.py -> build/lib/starpolymers/molecules 2020-06-09T17:01:28,838 creating build/lib/starpolymers/readers 2020-06-09T17:01:28,841 copying starpolymers/readers/dumper.py -> build/lib/starpolymers/readers 2020-06-09T17:01:28,848 copying starpolymers/readers/__init__.py -> build/lib/starpolymers/readers 2020-06-09T17:01:28,854 copying starpolymers/readers/logger.py -> build/lib/starpolymers/readers 2020-06-09T17:01:28,860 creating build/lib/starpolymers/tools 2020-06-09T17:01:28,862 copying starpolymers/tools/geometry.py -> build/lib/starpolymers/tools 2020-06-09T17:01:28,867 copying starpolymers/tools/cylinders.py -> build/lib/starpolymers/tools 2020-06-09T17:01:28,872 copying starpolymers/tools/bjerrum.py -> build/lib/starpolymers/tools 2020-06-09T17:01:28,879 copying starpolymers/tools/design.py -> build/lib/starpolymers/tools 2020-06-09T17:01:28,885 copying starpolymers/tools/plotter.py -> build/lib/starpolymers/tools 2020-06-09T17:01:28,892 copying starpolymers/tools/debye.py -> build/lib/starpolymers/tools 2020-06-09T17:01:28,897 copying starpolymers/tools/__init__.py -> build/lib/starpolymers/tools 2020-06-09T17:01:28,901 copying starpolymers/tools/neutraliser.py -> build/lib/starpolymers/tools 2020-06-09T17:01:28,908 creating build/lib/starpolymers/analysis 2020-06-09T17:01:28,910 copying starpolymers/analysis/surface.py -> build/lib/starpolymers/analysis 2020-06-09T17:01:28,917 copying starpolymers/analysis/nc.py -> build/lib/starpolymers/analysis 2020-06-09T17:01:28,924 copying starpolymers/analysis/gyr.py -> build/lib/starpolymers/analysis 2020-06-09T17:01:28,932 copying starpolymers/analysis/symmetry.py -> build/lib/starpolymers/analysis 2020-06-09T17:01:28,938 copying starpolymers/analysis/pmf.py -> build/lib/starpolymers/analysis 2020-06-09T17:01:28,944 copying starpolymers/analysis/rdf.py -> build/lib/starpolymers/analysis 2020-06-09T17:01:28,948 copying starpolymers/analysis/__init__.py -> build/lib/starpolymers/analysis 2020-06-09T17:01:28,954 creating build/lib/starpolymers/generators 2020-06-09T17:01:28,957 copying starpolymers/generators/_configuration.py -> build/lib/starpolymers/generators 2020-06-09T17:01:28,967 copying starpolymers/generators/configuration.py -> build/lib/starpolymers/generators 2020-06-09T17:01:28,974 copying starpolymers/generators/system.py -> build/lib/starpolymers/generators 2020-06-09T17:01:28,981 copying starpolymers/generators/input_file.py -> build/lib/starpolymers/generators 2020-06-09T17:01:28,988 copying starpolymers/generators/__init__.py -> build/lib/starpolymers/generators 2020-06-09T17:01:28,993 copying starpolymers/generators/colvars.py -> build/lib/starpolymers/generators 2020-06-09T17:01:29,025 installing to build/bdist.linux-armv7l/wheel 2020-06-09T17:01:29,026 running install 2020-06-09T17:01:29,028 running install_lib 2020-06-09T17:01:29,037 creating build/bdist.linux-armv7l 2020-06-09T17:01:29,038 creating build/bdist.linux-armv7l/wheel 2020-06-09T17:01:29,042 creating build/bdist.linux-armv7l/wheel/starpolymers 2020-06-09T17:01:29,046 creating build/bdist.linux-armv7l/wheel/starpolymers/molecules 2020-06-09T17:01:29,049 copying build/lib/starpolymers/molecules/brush.py -> build/bdist.linux-armv7l/wheel/starpolymers/molecules 2020-06-09T17:01:29,055 copying build/lib/starpolymers/molecules/polyelectrolyte.py -> build/bdist.linux-armv7l/wheel/starpolymers/molecules 2020-06-09T17:01:29,061 copying build/lib/starpolymers/molecules/salt.py -> build/bdist.linux-armv7l/wheel/starpolymers/molecules 2020-06-09T17:01:29,067 copying build/lib/starpolymers/molecules/base.py -> build/bdist.linux-armv7l/wheel/starpolymers/molecules 2020-06-09T17:01:29,073 copying build/lib/starpolymers/molecules/__init__.py -> build/bdist.linux-armv7l/wheel/starpolymers/molecules 2020-06-09T17:01:29,079 copying build/lib/starpolymers/molecules/_common.py -> build/bdist.linux-armv7l/wheel/starpolymers/molecules 2020-06-09T17:01:29,087 creating build/bdist.linux-armv7l/wheel/starpolymers/readers 2020-06-09T17:01:29,090 copying build/lib/starpolymers/readers/dumper.py -> build/bdist.linux-armv7l/wheel/starpolymers/readers 2020-06-09T17:01:29,097 copying build/lib/starpolymers/readers/__init__.py -> build/bdist.linux-armv7l/wheel/starpolymers/readers 2020-06-09T17:01:29,102 copying build/lib/starpolymers/readers/logger.py -> build/bdist.linux-armv7l/wheel/starpolymers/readers 2020-06-09T17:01:29,111 creating build/bdist.linux-armv7l/wheel/starpolymers/tools 2020-06-09T17:01:29,113 copying build/lib/starpolymers/tools/geometry.py -> build/bdist.linux-armv7l/wheel/starpolymers/tools 2020-06-09T17:01:29,120 copying build/lib/starpolymers/tools/cylinders.py -> build/bdist.linux-armv7l/wheel/starpolymers/tools 2020-06-09T17:01:29,125 copying build/lib/starpolymers/tools/bjerrum.py -> build/bdist.linux-armv7l/wheel/starpolymers/tools 2020-06-09T17:01:29,132 copying build/lib/starpolymers/tools/design.py -> build/bdist.linux-armv7l/wheel/starpolymers/tools 2020-06-09T17:01:29,138 copying build/lib/starpolymers/tools/plotter.py -> build/bdist.linux-armv7l/wheel/starpolymers/tools 2020-06-09T17:01:29,144 copying build/lib/starpolymers/tools/debye.py -> build/bdist.linux-armv7l/wheel/starpolymers/tools 2020-06-09T17:01:29,150 copying build/lib/starpolymers/tools/__init__.py -> build/bdist.linux-armv7l/wheel/starpolymers/tools 2020-06-09T17:01:29,156 copying build/lib/starpolymers/tools/neutraliser.py -> build/bdist.linux-armv7l/wheel/starpolymers/tools 2020-06-09T17:01:29,163 creating build/bdist.linux-armv7l/wheel/starpolymers/analysis 2020-06-09T17:01:29,166 copying build/lib/starpolymers/analysis/surface.py -> build/bdist.linux-armv7l/wheel/starpolymers/analysis 2020-06-09T17:01:29,174 copying build/lib/starpolymers/analysis/nc.py -> build/bdist.linux-armv7l/wheel/starpolymers/analysis 2020-06-09T17:01:29,181 copying build/lib/starpolymers/analysis/gyr.py -> build/bdist.linux-armv7l/wheel/starpolymers/analysis 2020-06-09T17:01:29,189 copying build/lib/starpolymers/analysis/symmetry.py -> build/bdist.linux-armv7l/wheel/starpolymers/analysis 2020-06-09T17:01:29,195 copying build/lib/starpolymers/analysis/pmf.py -> build/bdist.linux-armv7l/wheel/starpolymers/analysis 2020-06-09T17:01:29,202 copying build/lib/starpolymers/analysis/rdf.py -> build/bdist.linux-armv7l/wheel/starpolymers/analysis 2020-06-09T17:01:29,208 copying build/lib/starpolymers/analysis/__init__.py -> build/bdist.linux-armv7l/wheel/starpolymers/analysis 2020-06-09T17:01:29,213 copying build/lib/starpolymers/__init__.py -> build/bdist.linux-armv7l/wheel/starpolymers 2020-06-09T17:01:29,220 creating build/bdist.linux-armv7l/wheel/starpolymers/generators 2020-06-09T17:01:29,223 copying build/lib/starpolymers/generators/_configuration.py -> build/bdist.linux-armv7l/wheel/starpolymers/generators 2020-06-09T17:01:29,233 copying build/lib/starpolymers/generators/configuration.py -> build/bdist.linux-armv7l/wheel/starpolymers/generators 2020-06-09T17:01:29,240 copying build/lib/starpolymers/generators/system.py -> build/bdist.linux-armv7l/wheel/starpolymers/generators 2020-06-09T17:01:29,247 copying build/lib/starpolymers/generators/input_file.py -> build/bdist.linux-armv7l/wheel/starpolymers/generators 2020-06-09T17:01:29,254 copying build/lib/starpolymers/generators/__init__.py -> build/bdist.linux-armv7l/wheel/starpolymers/generators 2020-06-09T17:01:29,260 copying build/lib/starpolymers/generators/colvars.py -> build/bdist.linux-armv7l/wheel/starpolymers/generators 2020-06-09T17:01:29,268 creating build/bdist.linux-armv7l/wheel/test 2020-06-09T17:01:29,270 copying build/lib/test/test_molecules.py -> build/bdist.linux-armv7l/wheel/test 2020-06-09T17:01:29,276 copying build/lib/test/test_generators.py -> build/bdist.linux-armv7l/wheel/test 2020-06-09T17:01:29,282 copying build/lib/test/test_tools.py -> build/bdist.linux-armv7l/wheel/test 2020-06-09T17:01:29,288 copying build/lib/test/test_readers.py -> build/bdist.linux-armv7l/wheel/test 2020-06-09T17:01:29,293 copying build/lib/test/test_analysis.py -> build/bdist.linux-armv7l/wheel/test 2020-06-09T17:01:29,299 copying build/lib/test/__init__.py -> build/bdist.linux-armv7l/wheel/test 2020-06-09T17:01:29,303 running install_egg_info 2020-06-09T17:01:29,350 running egg_info 2020-06-09T17:01:29,354 writing starpolymers.egg-info/PKG-INFO 2020-06-09T17:01:29,358 writing top-level names to starpolymers.egg-info/top_level.txt 2020-06-09T17:01:29,360 writing dependency_links to starpolymers.egg-info/dependency_links.txt 2020-06-09T17:01:29,381 reading manifest file 'starpolymers.egg-info/SOURCES.txt' 2020-06-09T17:01:29,396 writing manifest file 'starpolymers.egg-info/SOURCES.txt' 2020-06-09T17:01:29,399 Copying starpolymers.egg-info to build/bdist.linux-armv7l/wheel/starpolymers-2.0.0-py3.5.egg-info 2020-06-09T17:01:29,420 running install_scripts 2020-06-09T17:01:29,588 creating build/bdist.linux-armv7l/wheel/starpolymers-2.0.0.dist-info/WHEEL 2020-06-09T17:01:29,978 Building wheel for starpolymers (setup.py): finished with status 'done' 2020-06-09T17:01:29,983 Created wheel for starpolymers: filename=starpolymers-2.0.0-py3-none-any.whl size=46295 sha256=5bc861271653da7f0912505130bd2504af6598220c13ed4e6b71bcf26a5a119a 2020-06-09T17:01:29,984 Stored in directory: /tmp/pip-ephem-wheel-cache-mivtpw1l/wheels/dd/08/93/4311da1c8b6da37813c0ed28278176e5cb0ddd833f691902c4 2020-06-09T17:01:29,988 Successfully built starpolymers 2020-06-09T17:01:30,003 Removed build tracker: '/tmp/pip-req-tracker-7gvyn0km'