2020-06-27T12:53:24,106 Created temporary directory: /tmp/pip-ephem-wheel-cache-wygtrnu5 2020-06-27T12:53:24,110 Created temporary directory: /tmp/pip-req-tracker-_zm5n2n2 2020-06-27T12:53:24,111 Initialized build tracking at /tmp/pip-req-tracker-_zm5n2n2 2020-06-27T12:53:24,113 Created build tracker: /tmp/pip-req-tracker-_zm5n2n2 2020-06-27T12:53:24,114 Entered build tracker: /tmp/pip-req-tracker-_zm5n2n2 2020-06-27T12:53:24,115 Created temporary directory: /tmp/pip-wheel-nyf8peme 2020-06-27T12:53:24,132 1 location(s) to search for versions of phenoshift: 2020-06-27T12:53:24,132 * https://pypi.org/simple/phenoshift/ 2020-06-27T12:53:24,132 Fetching project page and analyzing links: https://pypi.org/simple/phenoshift/ 2020-06-27T12:53:24,134 Getting page https://pypi.org/simple/phenoshift/ 2020-06-27T12:53:24,139 Found index url https://pypi.org/simple 2020-06-27T12:53:24,383 Skipping link: No binaries permitted for phenoshift: https://files.pythonhosted.org/packages/6a/04/c115b6cef06d19bbbf222f322abf7af4d4510d83722848eb0b0b3f677b89/phenoshift-0.0.2.dev0-py3-none-any.whl#sha256=aca1108d4b561b415f1362b27e54ba32b37f47f200cdd4f40baa9d9a2692308b (from https://pypi.org/simple/phenoshift/) 2020-06-27T12:53:24,384 Found link https://files.pythonhosted.org/packages/f5/b7/eb9291bcce35c132158b8a47dd6a6c1ab15dac61cb56aee8959d140c5aa2/phenoshift-0.0.2.dev0.tar.gz#sha256=3f6877ee9090a2546d0b69e203848a61164b60c56333cd127b0e0e7cf1c53cc4 (from https://pypi.org/simple/phenoshift/), version: 0.0.2.dev0 2020-06-27T12:53:24,385 Skipping link: No binaries permitted for phenoshift: https://files.pythonhosted.org/packages/91/f9/599175b5f37a6d43613383ee8920cd55f18a99c9523df005615f541d79c1/phenoshift-0.0.3.dev0-py3-none-any.whl#sha256=966e2afd1eee1a0d2e9e3dc2a1129feabe39d026673b8cfead7dc1b2fc6c92af (from https://pypi.org/simple/phenoshift/) 2020-06-27T12:53:24,386 Found link https://files.pythonhosted.org/packages/29/45/2c0c76373e56fc40fec6ab328584b1ff6c1d97296ff54b5933190bfac952/phenoshift-0.0.3.dev0.tar.gz#sha256=f1f2cc372649c2e1316b8d59c6788dfe8e2e6ec6a45cc9cd6362b5108c9768f9 (from https://pypi.org/simple/phenoshift/), version: 0.0.3.dev0 2020-06-27T12:53:24,387 Skipping link: No binaries permitted for phenoshift: https://files.pythonhosted.org/packages/65/30/e5ae12cda61e588363d80c70e038950d32ba15c11e115ca9b625afc96b8e/phenoshift-0.0.4.dev0-py3-none-any.whl#sha256=b0aef6e8bb89474e55821f0a54bdea2ad68201216c1d203a3b618d57c21841f5 (from https://pypi.org/simple/phenoshift/) 2020-06-27T12:53:24,387 Found link https://files.pythonhosted.org/packages/a1/24/d8ee2a11204f78e1977f2a7ed4bb6f159fa2a92a2cb114ee0180ab8e442e/phenoshift-0.0.4.dev0.tar.gz#sha256=f451ffc36ce85649b99e64ecd56b8b26e7f10a6587556b1b9eb2670f18d1d96e (from https://pypi.org/simple/phenoshift/), version: 0.0.4.dev0 2020-06-27T12:53:24,388 Skipping link: No binaries permitted for phenoshift: https://files.pythonhosted.org/packages/27/42/ce34d624f5b29500e484637cfab635ff63f101d9e1bfc725129ad58e0a41/phenoshift-1.0.0-py3-none-any.whl#sha256=58d5b251af5428371e4a6fbe5db1bebc62825b3030ba868f7c73c73fa8b253a0 (from https://pypi.org/simple/phenoshift/) 2020-06-27T12:53:24,389 Found link https://files.pythonhosted.org/packages/3a/db/0e7d07e48592c9176f2b2c950655c346e393c5e97bde42f0e1e0b7bc6f0b/phenoshift-1.0.0.tar.gz#sha256=694220b79a192756e6fb71ce14a21b19fb8a6545a165212216f745675077a033 (from https://pypi.org/simple/phenoshift/), version: 1.0.0 2020-06-27T12:53:24,399 Given no hashes to check 1 links for project 'phenoshift': discarding no candidates 2020-06-27T12:53:24,401 Using version 1.0.0 (newest of versions: 1.0.0) 2020-06-27T12:53:24,407 Collecting phenoshift==1.0.0 2020-06-27T12:53:24,413 Created temporary directory: /tmp/pip-unpack-ghis84ni 2020-06-27T12:53:24,526 Downloading phenoshift-1.0.0.tar.gz (22 kB) 2020-06-27T12:53:24,796 Added phenoshift==1.0.0 from https://files.pythonhosted.org/packages/3a/db/0e7d07e48592c9176f2b2c950655c346e393c5e97bde42f0e1e0b7bc6f0b/phenoshift-1.0.0.tar.gz#sha256=694220b79a192756e6fb71ce14a21b19fb8a6545a165212216f745675077a033 to build tracker '/tmp/pip-req-tracker-_zm5n2n2' 2020-06-27T12:53:24,798 Running setup.py (path:/tmp/pip-wheel-nyf8peme/phenoshift/setup.py) egg_info for package phenoshift 2020-06-27T12:53:24,800 Created temporary directory: /tmp/pip-pip-egg-info-ldha9vtd 2020-06-27T12:53:24,801 Running command python setup.py egg_info 2020-06-27T12:53:27,505 running egg_info 2020-06-27T12:53:27,514 creating /tmp/pip-pip-egg-info-ldha9vtd/phenoshift.egg-info 2020-06-27T12:53:27,518 writing dependency_links to /tmp/pip-pip-egg-info-ldha9vtd/phenoshift.egg-info/dependency_links.txt 2020-06-27T12:53:27,522 writing /tmp/pip-pip-egg-info-ldha9vtd/phenoshift.egg-info/PKG-INFO 2020-06-27T12:53:27,527 writing entry points to /tmp/pip-pip-egg-info-ldha9vtd/phenoshift.egg-info/entry_points.txt 2020-06-27T12:53:27,532 writing top-level names to /tmp/pip-pip-egg-info-ldha9vtd/phenoshift.egg-info/top_level.txt 2020-06-27T12:53:27,537 writing requirements to /tmp/pip-pip-egg-info-ldha9vtd/phenoshift.egg-info/requires.txt 2020-06-27T12:53:27,544 writing manifest file '/tmp/pip-pip-egg-info-ldha9vtd/phenoshift.egg-info/SOURCES.txt' 2020-06-27T12:53:28,022 reading manifest file '/tmp/pip-pip-egg-info-ldha9vtd/phenoshift.egg-info/SOURCES.txt' 2020-06-27T12:53:28,034 writing manifest file '/tmp/pip-pip-egg-info-ldha9vtd/phenoshift.egg-info/SOURCES.txt' 2020-06-27T12:53:28,176 Source in /tmp/pip-wheel-nyf8peme/phenoshift has version 1.0.0, which satisfies requirement phenoshift==1.0.0 from https://files.pythonhosted.org/packages/3a/db/0e7d07e48592c9176f2b2c950655c346e393c5e97bde42f0e1e0b7bc6f0b/phenoshift-1.0.0.tar.gz#sha256=694220b79a192756e6fb71ce14a21b19fb8a6545a165212216f745675077a033 2020-06-27T12:53:28,178 Removed phenoshift==1.0.0 from https://files.pythonhosted.org/packages/3a/db/0e7d07e48592c9176f2b2c950655c346e393c5e97bde42f0e1e0b7bc6f0b/phenoshift-1.0.0.tar.gz#sha256=694220b79a192756e6fb71ce14a21b19fb8a6545a165212216f745675077a033 from build tracker '/tmp/pip-req-tracker-_zm5n2n2' 2020-06-27T12:53:28,182 Building wheels for collected packages: phenoshift 2020-06-27T12:53:28,191 Created temporary directory: /tmp/pip-wheel-6wfghvwz 2020-06-27T12:53:28,192 Building wheel for phenoshift (setup.py): started 2020-06-27T12:53:28,193 Destination directory: /tmp/pip-wheel-6wfghvwz 2020-06-27T12:53:28,193 Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-nyf8peme/phenoshift/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-nyf8peme/phenoshift/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-6wfghvwz 2020-06-27T12:53:30,797 running bdist_wheel 2020-06-27T12:53:30,812 running build 2020-06-27T12:53:30,813 running build_py 2020-06-27T12:53:31,201 creating build 2020-06-27T12:53:31,202 creating build/lib 2020-06-27T12:53:31,204 creating build/lib/phenoshift 2020-06-27T12:53:31,206 copying phenoshift/__init__.py -> build/lib/phenoshift 2020-06-27T12:53:31,211 copying phenoshift/main.py -> build/lib/phenoshift 2020-06-27T12:53:31,217 creating build/lib/phenoshift/tests 2020-06-27T12:53:31,224 copying phenoshift/tests/test_cli.py -> build/lib/phenoshift/tests 2020-06-27T12:53:31,229 copying phenoshift/tests/__init__.py -> build/lib/phenoshift/tests 2020-06-27T12:53:31,235 creating build/lib/phenoshift/util 2020-06-27T12:53:31,238 copying phenoshift/util/QueryFileParser.py -> build/lib/phenoshift/util 2020-06-27T12:53:31,243 copying phenoshift/util/AnnotationResolver.py -> build/lib/phenoshift/util 2020-06-27T12:53:31,247 copying phenoshift/util/AnnotationUtility.py -> build/lib/phenoshift/util 2020-06-27T12:53:31,253 copying phenoshift/util/__init__.py -> build/lib/phenoshift/util 2020-06-27T12:53:31,258 copying phenoshift/util/AnnotationParser.py -> build/lib/phenoshift/util 2020-06-27T12:53:31,268 creating build/lib/phenoshift/models 2020-06-27T12:53:31,270 copying phenoshift/models/Query.py -> build/lib/phenoshift/models 2020-06-27T12:53:31,275 copying phenoshift/models/LoincId.py -> build/lib/phenoshift/models 2020-06-27T12:53:31,280 copying phenoshift/models/LoincScale.py -> build/lib/phenoshift/models 2020-06-27T12:53:31,284 copying phenoshift/models/__init__.py -> build/lib/phenoshift/models 2020-06-27T12:53:31,289 creating build/lib/phenoshift/errors 2020-06-27T12:53:31,291 copying phenoshift/errors/__init__.py -> build/lib/phenoshift/errors 2020-06-27T12:53:31,297 copying phenoshift/errors/SeepValidationError.py -> build/lib/phenoshift/errors 2020-06-27T12:53:31,302 copying phenoshift/errors/SeepParsingError.py -> build/lib/phenoshift/errors 2020-06-27T12:53:31,310 creating build/lib/phenoshift/util/tests 2020-06-27T12:53:31,312 copying phenoshift/util/tests/test_annotation_parser.py -> build/lib/phenoshift/util/tests 2020-06-27T12:53:31,319 copying phenoshift/util/tests/test_annotation_resolver.py -> build/lib/phenoshift/util/tests 2020-06-27T12:53:31,323 copying phenoshift/util/tests/test_query_parser.py -> build/lib/phenoshift/util/tests 2020-06-27T12:53:31,328 copying phenoshift/util/tests/test_annotation_utility.py -> build/lib/phenoshift/util/tests 2020-06-27T12:53:31,332 copying phenoshift/util/tests/__init__.py -> build/lib/phenoshift/util/tests 2020-06-27T12:53:31,338 creating build/lib/phenoshift/models/tests 2020-06-27T12:53:31,341 copying phenoshift/models/tests/test_loincId.py -> build/lib/phenoshift/models/tests 2020-06-27T12:53:31,345 copying phenoshift/models/tests/__init__.py -> build/lib/phenoshift/models/tests 2020-06-27T12:53:31,352 copying phenoshift/models/tests/test_loinc_scale.py -> build/lib/phenoshift/models/tests 2020-06-27T12:53:31,371 copying phenoshift/tests/test_annotation_file.tsv -> build/lib/phenoshift/tests 2020-06-27T12:53:31,378 copying phenoshift/tests/test_cli.pyc -> build/lib/phenoshift/tests 2020-06-27T12:53:31,384 copying phenoshift/tests/__init__.pyc -> build/lib/phenoshift/tests 2020-06-27T12:53:31,391 copying phenoshift/tests/test_query.tsv -> build/lib/phenoshift/tests 2020-06-27T12:53:31,396 copying phenoshift/util/tests/test_annotation_utility.pyc -> build/lib/phenoshift/util/tests 2020-06-27T12:53:31,402 copying phenoshift/util/tests/test_annotation_file.tsv -> build/lib/phenoshift/util/tests 2020-06-27T12:53:31,408 copying phenoshift/util/tests/test_query_parser.pyc -> build/lib/phenoshift/util/tests 2020-06-27T12:53:31,414 copying phenoshift/util/tests/test_annotation_parser.pyc -> build/lib/phenoshift/util/tests 2020-06-27T12:53:31,422 copying phenoshift/util/tests/test_annotation_resolver.pyc -> build/lib/phenoshift/util/tests 2020-06-27T12:53:31,431 copying phenoshift/util/tests/__init__.pyc -> build/lib/phenoshift/util/tests 2020-06-27T12:53:31,439 copying phenoshift/util/tests/test_query.tsv -> build/lib/phenoshift/util/tests 2020-06-27T12:53:31,448 copying phenoshift/models/tests/test_loincId.pyc -> build/lib/phenoshift/models/tests 2020-06-27T12:53:31,458 copying phenoshift/models/tests/__init__.pyc -> build/lib/phenoshift/models/tests 2020-06-27T12:53:31,463 copying phenoshift/models/tests/test_loinc_scale.pyc -> build/lib/phenoshift/models/tests 2020-06-27T12:53:31,485 installing to build/bdist.linux-armv7l/wheel 2020-06-27T12:53:31,485 running install 2020-06-27T12:53:31,491 running install_lib 2020-06-27T12:53:31,499 creating build/bdist.linux-armv7l 2020-06-27T12:53:31,501 creating build/bdist.linux-armv7l/wheel 2020-06-27T12:53:31,505 creating build/bdist.linux-armv7l/wheel/phenoshift 2020-06-27T12:53:31,510 creating build/bdist.linux-armv7l/wheel/phenoshift/tests 2020-06-27T12:53:31,513 copying build/lib/phenoshift/tests/test_cli.py -> build/bdist.linux-armv7l/wheel/phenoshift/tests 2020-06-27T12:53:31,520 copying build/lib/phenoshift/tests/test_annotation_file.tsv -> build/bdist.linux-armv7l/wheel/phenoshift/tests 2020-06-27T12:53:31,525 copying build/lib/phenoshift/tests/test_cli.pyc -> build/bdist.linux-armv7l/wheel/phenoshift/tests 2020-06-27T12:53:31,530 copying build/lib/phenoshift/tests/__init__.py -> build/bdist.linux-armv7l/wheel/phenoshift/tests 2020-06-27T12:53:31,535 copying build/lib/phenoshift/tests/__init__.pyc -> build/bdist.linux-armv7l/wheel/phenoshift/tests 2020-06-27T12:53:31,540 copying build/lib/phenoshift/tests/test_query.tsv -> build/bdist.linux-armv7l/wheel/phenoshift/tests 2020-06-27T12:53:31,546 creating build/bdist.linux-armv7l/wheel/phenoshift/util 2020-06-27T12:53:31,552 creating build/bdist.linux-armv7l/wheel/phenoshift/util/tests 2020-06-27T12:53:31,555 copying build/lib/phenoshift/util/tests/test_annotation_utility.pyc -> build/bdist.linux-armv7l/wheel/phenoshift/util/tests 2020-06-27T12:53:31,562 copying build/lib/phenoshift/util/tests/test_annotation_file.tsv -> build/bdist.linux-armv7l/wheel/phenoshift/util/tests 2020-06-27T12:53:31,567 copying build/lib/phenoshift/util/tests/test_query_parser.pyc -> build/bdist.linux-armv7l/wheel/phenoshift/util/tests 2020-06-27T12:53:31,573 copying build/lib/phenoshift/util/tests/test_annotation_parser.pyc -> build/bdist.linux-armv7l/wheel/phenoshift/util/tests 2020-06-27T12:53:31,579 copying build/lib/phenoshift/util/tests/test_annotation_parser.py -> build/bdist.linux-armv7l/wheel/phenoshift/util/tests 2020-06-27T12:53:31,585 copying build/lib/phenoshift/util/tests/test_annotation_resolver.py -> build/bdist.linux-armv7l/wheel/phenoshift/util/tests 2020-06-27T12:53:31,591 copying build/lib/phenoshift/util/tests/test_query_parser.py -> build/bdist.linux-armv7l/wheel/phenoshift/util/tests 2020-06-27T12:53:31,596 copying build/lib/phenoshift/util/tests/test_annotation_resolver.pyc -> build/bdist.linux-armv7l/wheel/phenoshift/util/tests 2020-06-27T12:53:31,601 copying build/lib/phenoshift/util/tests/test_annotation_utility.py -> build/bdist.linux-armv7l/wheel/phenoshift/util/tests 2020-06-27T12:53:31,606 copying build/lib/phenoshift/util/tests/__init__.py -> build/bdist.linux-armv7l/wheel/phenoshift/util/tests 2020-06-27T12:53:31,610 copying build/lib/phenoshift/util/tests/__init__.pyc -> build/bdist.linux-armv7l/wheel/phenoshift/util/tests 2020-06-27T12:53:31,617 copying build/lib/phenoshift/util/tests/test_query.tsv -> build/bdist.linux-armv7l/wheel/phenoshift/util/tests 2020-06-27T12:53:31,623 copying build/lib/phenoshift/util/QueryFileParser.py -> build/bdist.linux-armv7l/wheel/phenoshift/util 2020-06-27T12:53:31,629 copying build/lib/phenoshift/util/AnnotationResolver.py -> build/bdist.linux-armv7l/wheel/phenoshift/util 2020-06-27T12:53:31,634 copying build/lib/phenoshift/util/AnnotationUtility.py -> build/bdist.linux-armv7l/wheel/phenoshift/util 2020-06-27T12:53:31,638 copying build/lib/phenoshift/util/__init__.py -> build/bdist.linux-armv7l/wheel/phenoshift/util 2020-06-27T12:53:31,642 copying build/lib/phenoshift/util/AnnotationParser.py -> build/bdist.linux-armv7l/wheel/phenoshift/util 2020-06-27T12:53:31,648 copying build/lib/phenoshift/__init__.py -> build/bdist.linux-armv7l/wheel/phenoshift 2020-06-27T12:53:31,653 copying build/lib/phenoshift/main.py -> build/bdist.linux-armv7l/wheel/phenoshift 2020-06-27T12:53:31,668 creating build/bdist.linux-armv7l/wheel/phenoshift/models 2020-06-27T12:53:31,671 creating build/bdist.linux-armv7l/wheel/phenoshift/models/tests 2020-06-27T12:53:31,673 copying build/lib/phenoshift/models/tests/test_loincId.pyc -> build/bdist.linux-armv7l/wheel/phenoshift/models/tests 2020-06-27T12:53:31,678 copying build/lib/phenoshift/models/tests/test_loincId.py -> build/bdist.linux-armv7l/wheel/phenoshift/models/tests 2020-06-27T12:53:31,682 copying build/lib/phenoshift/models/tests/__init__.py -> build/bdist.linux-armv7l/wheel/phenoshift/models/tests 2020-06-27T12:53:31,685 copying build/lib/phenoshift/models/tests/__init__.pyc -> build/bdist.linux-armv7l/wheel/phenoshift/models/tests 2020-06-27T12:53:31,689 copying build/lib/phenoshift/models/tests/test_loinc_scale.pyc -> build/bdist.linux-armv7l/wheel/phenoshift/models/tests 2020-06-27T12:53:31,694 copying build/lib/phenoshift/models/tests/test_loinc_scale.py -> build/bdist.linux-armv7l/wheel/phenoshift/models/tests 2020-06-27T12:53:31,699 copying build/lib/phenoshift/models/Query.py -> build/bdist.linux-armv7l/wheel/phenoshift/models 2020-06-27T12:53:31,703 copying build/lib/phenoshift/models/LoincId.py -> build/bdist.linux-armv7l/wheel/phenoshift/models 2020-06-27T12:53:31,707 copying build/lib/phenoshift/models/LoincScale.py -> build/bdist.linux-armv7l/wheel/phenoshift/models 2020-06-27T12:53:31,711 copying build/lib/phenoshift/models/__init__.py -> build/bdist.linux-armv7l/wheel/phenoshift/models 2020-06-27T12:53:31,715 creating build/bdist.linux-armv7l/wheel/phenoshift/errors 2020-06-27T12:53:31,718 copying build/lib/phenoshift/errors/__init__.py -> build/bdist.linux-armv7l/wheel/phenoshift/errors 2020-06-27T12:53:31,727 copying build/lib/phenoshift/errors/SeepValidationError.py -> build/bdist.linux-armv7l/wheel/phenoshift/errors 2020-06-27T12:53:31,728 copying build/lib/phenoshift/errors/SeepParsingError.py -> build/bdist.linux-armv7l/wheel/phenoshift/errors 2020-06-27T12:53:31,733 running install_data 2020-06-27T12:53:31,804 creating build/bdist.linux-armv7l/wheel/phenoshift-1.0.0.data 2020-06-27T12:53:31,805 creating build/bdist.linux-armv7l/wheel/phenoshift-1.0.0.data/data 2020-06-27T12:53:31,808 copying requirements.txt -> build/bdist.linux-armv7l/wheel/phenoshift-1.0.0.data/data/ 2020-06-27T12:53:31,814 copying LICENSE.txt -> build/bdist.linux-armv7l/wheel/phenoshift-1.0.0.data/data/ 2020-06-27T12:53:31,822 running install_egg_info 2020-06-27T12:53:31,877 running egg_info 2020-06-27T12:53:31,878 writing dependency_links to phenoshift.egg-info/dependency_links.txt 2020-06-27T12:53:31,881 writing top-level names to phenoshift.egg-info/top_level.txt 2020-06-27T12:53:31,884 writing requirements to phenoshift.egg-info/requires.txt 2020-06-27T12:53:31,887 writing entry points to phenoshift.egg-info/entry_points.txt 2020-06-27T12:53:31,889 writing phenoshift.egg-info/PKG-INFO 2020-06-27T12:53:31,910 reading manifest file 'phenoshift.egg-info/SOURCES.txt' 2020-06-27T12:53:31,929 writing manifest file 'phenoshift.egg-info/SOURCES.txt' 2020-06-27T12:53:31,933 Copying phenoshift.egg-info to build/bdist.linux-armv7l/wheel/phenoshift-1.0.0-py3.5.egg-info 2020-06-27T12:53:31,964 running install_scripts 2020-06-27T12:53:32,175 creating build/bdist.linux-armv7l/wheel/phenoshift-1.0.0.dist-info/WHEEL 2020-06-27T12:53:32,656 Building wheel for phenoshift (setup.py): finished with status 'done' 2020-06-27T12:53:32,664 Created wheel for phenoshift: filename=phenoshift-1.0.0-py3-none-any.whl size=34664 sha256=f6e26d8d3e7a91a3b66768575e308bf0fc951eefbc3862af834edaa84ea39096 2020-06-27T12:53:32,664 Stored in directory: /tmp/pip-ephem-wheel-cache-wygtrnu5/wheels/3e/89/f1/4b9f82ec5152bfb96bf2e446fa5f63b8c4f13626725a58acdf 2020-06-27T12:53:32,671 Successfully built phenoshift 2020-06-27T12:53:32,685 Removed build tracker: '/tmp/pip-req-tracker-_zm5n2n2'