2020-06-29T23:18:13,163 Created temporary directory: /tmp/pip-ephem-wheel-cache-wn20mqb3
2020-06-29T23:18:13,167 Created temporary directory: /tmp/pip-req-tracker-mwtbqi7l
2020-06-29T23:18:13,168 Initialized build tracking at /tmp/pip-req-tracker-mwtbqi7l
2020-06-29T23:18:13,168 Created build tracker: /tmp/pip-req-tracker-mwtbqi7l
2020-06-29T23:18:13,169 Entered build tracker: /tmp/pip-req-tracker-mwtbqi7l
2020-06-29T23:18:13,170 Created temporary directory: /tmp/pip-wheel-79dn5ic7
2020-06-29T23:18:13,184 1 location(s) to search for versions of dms-variants:
2020-06-29T23:18:13,184 * https://pypi.org/simple/dms-variants/
2020-06-29T23:18:13,184 Fetching project page and analyzing links: https://pypi.org/simple/dms-variants/
2020-06-29T23:18:13,185 Getting page https://pypi.org/simple/dms-variants/
2020-06-29T23:18:13,188 Found index url https://pypi.org/simple
2020-06-29T23:18:13,395   Found link https://files.pythonhosted.org/packages/ae/3f/55cb4c15b42820532cac821318f50f3ad17ade82f880d71812bcae8967c7/dms_variants-0.1.0.tar.gz#sha256=240e9258b4185a36e0b8058661d4f482960b23f76bffa69ecb47046c8316d91f (from https://pypi.org/simple/dms-variants/), version: 0.1.0
2020-06-29T23:18:13,396   Found link https://files.pythonhosted.org/packages/a1/df/f59669180f011684499c37ecc8cb267773f1b30959912929e2bece714a2b/dms_variants-0.2.0.tar.gz#sha256=23bba8fe9475fe9ffcbac1de26ebfc18b2d801c0202d463f3cb187afcaaf8667 (from https://pypi.org/simple/dms-variants/), version: 0.2.0
2020-06-29T23:18:13,397   Found link https://files.pythonhosted.org/packages/5a/f8/776a37d070d5aed4b93ff2e010a82dc4b0d7f850968370ddd2d853cc2bde/dms_variants-0.3.0.tar.gz#sha256=a4ca60ab427417385f4ba1c29bfb3c12232f1b75ebfabd58021733f7584d2de5 (from https://pypi.org/simple/dms-variants/), version: 0.3.0
2020-06-29T23:18:13,397   Found link https://files.pythonhosted.org/packages/08/cb/ecaba6f45ed2b0a10c2c7c973bf7f7e6650e91706e2a9714003f39b70d9c/dms_variants-0.4.0.tar.gz#sha256=15fe61c48be235d99222ffd974ad3f0870c926c81185c4f6b9b3c77b6aae363f (from https://pypi.org/simple/dms-variants/), version: 0.4.0
2020-06-29T23:18:13,398   Found link https://files.pythonhosted.org/packages/cb/c1/ee28982822869d3858cf904c46cae6f6abf9a49004a1d402c7c49e75c931/dms_variants-0.4.1.tar.gz#sha256=49e1715dd9f8c2f6f4c991ff47ad57b310a0018d717b9968f9fe63927b5d977f (from https://pypi.org/simple/dms-variants/), version: 0.4.1
2020-06-29T23:18:13,399   Found link https://files.pythonhosted.org/packages/ab/1f/5f97b19ea51460f1e313a0e583397f2885b2c78227d25217e97f40cf9cd6/dms_variants-0.4.2.tar.gz#sha256=0b6c10a4211d2c7457d38e05b49f883b757e25da1834f8a979fbe823b859f0fb (from https://pypi.org/simple/dms-variants/), version: 0.4.2
2020-06-29T23:18:13,399   Found link https://files.pythonhosted.org/packages/18/5c/5c03b9809e9e3642993b12c623f494d1e9850a37d66ec4265dc5cf34cd4e/dms_variants-0.4.3.tar.gz#sha256=475af7344dd422b1e4d26b8feb99c7f408021b28f1e4a9cec0b8f3be00ae4260 (from https://pypi.org/simple/dms-variants/), version: 0.4.3
2020-06-29T23:18:13,400   Found link https://files.pythonhosted.org/packages/a4/47/f6ca84c217c56945969a0ac705049e353f15112d499cc19dda78d3df1303/dms_variants-0.4.4.tar.gz#sha256=1340251c9b7771f533f6aa87062d7f497196b7f3d5131ed10403a0e400d6199a (from https://pypi.org/simple/dms-variants/), version: 0.4.4
2020-06-29T23:18:13,401   Found link https://files.pythonhosted.org/packages/00/0e/0a93d88f0d7bdf44468684379a1a08157e9975c9d22196779654f71476b8/dms_variants-0.4.5.tar.gz#sha256=a4d057b48c966078f12ee1ac1a9fabbcd037854163dbe158581a8c267d2c19b0 (from https://pypi.org/simple/dms-variants/), version: 0.4.5
2020-06-29T23:18:13,401   Found link https://files.pythonhosted.org/packages/70/c5/2e269ddbe3e1c97cff9f57359c64c611f60e2e5410c34f3d3d386055c965/dms_variants-0.4.6.tar.gz#sha256=8ccfdfe657434642d5a8e44cff81540ed935397f200af3c68fe7e2824067311c (from https://pypi.org/simple/dms-variants/), version: 0.4.6
2020-06-29T23:18:13,402   Found link https://files.pythonhosted.org/packages/8a/f6/cfbf9b91a015af228a967735f0f344c1e5c3c0cd0d1a352ac527c491480c/dms_variants-0.4.7.tar.gz#sha256=2ace07ad2cf1eb6d7dad4ae436bf5d7ddf85f5aab86dd89ba530ef9dab0a1b7f (from https://pypi.org/simple/dms-variants/), version: 0.4.7
2020-06-29T23:18:13,403   Found link https://files.pythonhosted.org/packages/d4/be/a370cf848dbeca2424e92fb7dfb8aa1020bb3ed915ba41d8945f7fdac442/dms_variants-0.5.0.tar.gz#sha256=deafb649aee3962932c5eca981f0e524d4b3712e912ba5d87626f14b0164efd0 (from https://pypi.org/simple/dms-variants/), version: 0.5.0
2020-06-29T23:18:13,403   Found link https://files.pythonhosted.org/packages/c0/87/803c8c10bffd7266a9aad3aa29aacd7e5afcd78200be1ef84f420eaa9738/dms_variants-0.5.1.tar.gz#sha256=653c3dfcad844fc77c19273f0c4211ce5e46775ba7ce4acd72a1d6ee9829f18c (from https://pypi.org/simple/dms-variants/), version: 0.5.1
2020-06-29T23:18:13,404   Found link https://files.pythonhosted.org/packages/4f/83/8a7251d6d2c4a2666f059e5808c6ea19f82a4468dbf8e1f6a693ed59fca4/dms_variants-0.5.2.tar.gz#sha256=33bbfb5f22122fffe721b3ec091c13510d8345fe5a685d450103689706dfcb10 (from https://pypi.org/simple/dms-variants/), version: 0.5.2
2020-06-29T23:18:13,405   Found link https://files.pythonhosted.org/packages/7b/63/824460ca401ee784f4a0f64e7fcf31866561fd2c797f096e1b5b34d0e5d2/dms_variants-0.5.3.tar.gz#sha256=76bf6d592af6c070ef8503eeeb5d93761bf66a1644c722d1b2a4a485c4e33a7f (from https://pypi.org/simple/dms-variants/), version: 0.5.3
2020-06-29T23:18:13,405   Found link https://files.pythonhosted.org/packages/fe/ea/b496ccbfb75b559050c46b6c95a0edccbeac37123effc4218a8e99a26518/dms_variants-0.6.0.tar.gz#sha256=f42d47bbcf856f4a8265858bd18f2c026fa4408c194c1b60e97d93dd8371a2a6 (from https://pypi.org/simple/dms-variants/), version: 0.6.0
2020-06-29T23:18:13,406   Found link https://files.pythonhosted.org/packages/e0/0b/be1c27b17d06a9371673c687ac832f38fc3e755e0703d666699aa6de2f64/dms_variants-0.7.0.tar.gz#sha256=c899987c127503ab82608d4b8fc904ecff1b7a1e0e312a7171194e007e3d5159 (from https://pypi.org/simple/dms-variants/), version: 0.7.0
2020-06-29T23:18:13,423 Given no hashes to check 1 links for project 'dms-variants': discarding no candidates
2020-06-29T23:18:13,424 Using version 0.7.0 (newest of versions: 0.7.0)
2020-06-29T23:18:13,430 Collecting dms-variants==0.7.0
2020-06-29T23:18:13,433   Created temporary directory: /tmp/pip-unpack-9b773psu
2020-06-29T23:18:13,508   Downloading dms_variants-0.7.0.tar.gz (5.5 MB)
2020-06-29T23:18:17,250   Added dms-variants==0.7.0 from https://files.pythonhosted.org/packages/e0/0b/be1c27b17d06a9371673c687ac832f38fc3e755e0703d666699aa6de2f64/dms_variants-0.7.0.tar.gz#sha256=c899987c127503ab82608d4b8fc904ecff1b7a1e0e312a7171194e007e3d5159 to build tracker '/tmp/pip-req-tracker-mwtbqi7l'
2020-06-29T23:18:17,253     Running setup.py (path:/tmp/pip-wheel-79dn5ic7/dms-variants/setup.py) egg_info for package dms-variants
2020-06-29T23:18:17,256     Created temporary directory: /tmp/pip-pip-egg-info-gbyk_ebp
2020-06-29T23:18:17,256     Running command python setup.py egg_info
2020-06-29T23:18:18,990     running egg_info
2020-06-29T23:18:18,996     creating /tmp/pip-pip-egg-info-gbyk_ebp/dms_variants.egg-info
2020-06-29T23:18:18,998     writing /tmp/pip-pip-egg-info-gbyk_ebp/dms_variants.egg-info/PKG-INFO
2020-06-29T23:18:19,002     writing dependency_links to /tmp/pip-pip-egg-info-gbyk_ebp/dms_variants.egg-info/dependency_links.txt
2020-06-29T23:18:19,007     writing requirements to /tmp/pip-pip-egg-info-gbyk_ebp/dms_variants.egg-info/requires.txt
2020-06-29T23:18:19,009     writing top-level names to /tmp/pip-pip-egg-info-gbyk_ebp/dms_variants.egg-info/top_level.txt
2020-06-29T23:18:19,013     writing manifest file '/tmp/pip-pip-egg-info-gbyk_ebp/dms_variants.egg-info/SOURCES.txt'
2020-06-29T23:18:19,655     reading manifest file '/tmp/pip-pip-egg-info-gbyk_ebp/dms_variants.egg-info/SOURCES.txt'
2020-06-29T23:18:19,662     writing manifest file '/tmp/pip-pip-egg-info-gbyk_ebp/dms_variants.egg-info/SOURCES.txt'
2020-06-29T23:18:19,801   Source in /tmp/pip-wheel-79dn5ic7/dms-variants has version 0.7.0, which satisfies requirement dms-variants==0.7.0 from https://files.pythonhosted.org/packages/e0/0b/be1c27b17d06a9371673c687ac832f38fc3e755e0703d666699aa6de2f64/dms_variants-0.7.0.tar.gz#sha256=c899987c127503ab82608d4b8fc904ecff1b7a1e0e312a7171194e007e3d5159
2020-06-29T23:18:19,803   Removed dms-variants==0.7.0 from https://files.pythonhosted.org/packages/e0/0b/be1c27b17d06a9371673c687ac832f38fc3e755e0703d666699aa6de2f64/dms_variants-0.7.0.tar.gz#sha256=c899987c127503ab82608d4b8fc904ecff1b7a1e0e312a7171194e007e3d5159 from build tracker '/tmp/pip-req-tracker-mwtbqi7l'
2020-06-29T23:18:19,806 Building wheels for collected packages: dms-variants
2020-06-29T23:18:19,815   Created temporary directory: /tmp/pip-wheel-gnxg9dvn
2020-06-29T23:18:19,816   Building wheel for dms-variants (setup.py): started
2020-06-29T23:18:19,817   Destination directory: /tmp/pip-wheel-gnxg9dvn
2020-06-29T23:18:19,817   Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-79dn5ic7/dms-variants/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-79dn5ic7/dms-variants/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-gnxg9dvn
2020-06-29T23:18:21,583   running bdist_wheel
2020-06-29T23:18:21,595   running build
2020-06-29T23:18:21,596   running build_py
2020-06-29T23:18:21,873   creating build
2020-06-29T23:18:21,874   creating build/lib.linux-armv7l-3.7
2020-06-29T23:18:21,876   creating build/lib.linux-armv7l-3.7/dms_variants
2020-06-29T23:18:21,878   copying dms_variants/constants.py -> build/lib.linux-armv7l-3.7/dms_variants
2020-06-29T23:18:21,883   copying dms_variants/codonvarianttable.py -> build/lib.linux-armv7l-3.7/dms_variants
2020-06-29T23:18:21,899   copying dms_variants/simulate.py -> build/lib.linux-armv7l-3.7/dms_variants
2020-06-29T23:18:21,908   copying dms_variants/barcodes.py -> build/lib.linux-armv7l-3.7/dms_variants
2020-06-29T23:18:21,914   copying dms_variants/ispline.py -> build/lib.linux-armv7l-3.7/dms_variants
2020-06-29T23:18:21,923   copying dms_variants/plotnine_themes.py -> build/lib.linux-armv7l-3.7/dms_variants
2020-06-29T23:18:21,927   copying dms_variants/illuminabarcodeparser.py -> build/lib.linux-armv7l-3.7/dms_variants
2020-06-29T23:18:21,932   copying dms_variants/fastq.py -> build/lib.linux-armv7l-3.7/dms_variants
2020-06-29T23:18:21,937   copying dms_variants/binarymap.py -> build/lib.linux-armv7l-3.7/dms_variants
2020-06-29T23:18:21,945   copying dms_variants/bottlenecks.py -> build/lib.linux-armv7l-3.7/dms_variants
2020-06-29T23:18:21,951   copying dms_variants/__init__.py -> build/lib.linux-armv7l-3.7/dms_variants
2020-06-29T23:18:21,956   copying dms_variants/utils.py -> build/lib.linux-armv7l-3.7/dms_variants
2020-06-29T23:18:21,963   copying dms_variants/globalepistasis.py -> build/lib.linux-armv7l-3.7/dms_variants
2020-06-29T23:18:21,981   running build_ext
2020-06-29T23:18:22,338   building 'dms_variants._cutils' extension
2020-06-29T23:18:22,339   creating build/temp.linux-armv7l-3.7
2020-06-29T23:18:22,340   creating build/temp.linux-armv7l-3.7/dms_variants
2020-06-29T23:18:22,341   arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.7m -c dms_variants/_cutils.c -o build/temp.linux-armv7l-3.7/dms_variants/_cutils.o -Wno-error=declaration-after-statement
2020-06-29T23:18:23,147   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.7/dms_variants/_cutils.o -o build/lib.linux-armv7l-3.7/dms_variants/_cutils.cpython-37m-arm-linux-gnueabihf.so
2020-06-29T23:18:23,343   installing to build/bdist.linux-armv7l/wheel
2020-06-29T23:18:23,344   running install
2020-06-29T23:18:23,345   running install_lib
2020-06-29T23:18:23,352   creating build/bdist.linux-armv7l
2020-06-29T23:18:23,353   creating build/bdist.linux-armv7l/wheel
2020-06-29T23:18:23,357   creating build/bdist.linux-armv7l/wheel/dms_variants
2020-06-29T23:18:23,359   copying build/lib.linux-armv7l-3.7/dms_variants/constants.py -> build/bdist.linux-armv7l/wheel/dms_variants
2020-06-29T23:18:23,365   copying build/lib.linux-armv7l-3.7/dms_variants/_cutils.cpython-37m-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/dms_variants
2020-06-29T23:18:23,372   copying build/lib.linux-armv7l-3.7/dms_variants/codonvarianttable.py -> build/bdist.linux-armv7l/wheel/dms_variants
2020-06-29T23:18:23,390   copying build/lib.linux-armv7l-3.7/dms_variants/simulate.py -> build/bdist.linux-armv7l/wheel/dms_variants
2020-06-29T23:18:23,399   copying build/lib.linux-armv7l-3.7/dms_variants/barcodes.py -> build/bdist.linux-armv7l/wheel/dms_variants
2020-06-29T23:18:23,404   copying build/lib.linux-armv7l-3.7/dms_variants/ispline.py -> build/bdist.linux-armv7l/wheel/dms_variants
2020-06-29T23:18:23,412   copying build/lib.linux-armv7l-3.7/dms_variants/plotnine_themes.py -> build/bdist.linux-armv7l/wheel/dms_variants
2020-06-29T23:18:23,416   copying build/lib.linux-armv7l-3.7/dms_variants/illuminabarcodeparser.py -> build/bdist.linux-armv7l/wheel/dms_variants
2020-06-29T23:18:23,424   copying build/lib.linux-armv7l-3.7/dms_variants/fastq.py -> build/bdist.linux-armv7l/wheel/dms_variants
2020-06-29T23:18:23,431   copying build/lib.linux-armv7l-3.7/dms_variants/binarymap.py -> build/bdist.linux-armv7l/wheel/dms_variants
2020-06-29T23:18:23,439   copying build/lib.linux-armv7l-3.7/dms_variants/bottlenecks.py -> build/bdist.linux-armv7l/wheel/dms_variants
2020-06-29T23:18:23,445   copying build/lib.linux-armv7l-3.7/dms_variants/__init__.py -> build/bdist.linux-armv7l/wheel/dms_variants
2020-06-29T23:18:23,451   copying build/lib.linux-armv7l-3.7/dms_variants/utils.py -> build/bdist.linux-armv7l/wheel/dms_variants
2020-06-29T23:18:23,459   copying build/lib.linux-armv7l-3.7/dms_variants/globalepistasis.py -> build/bdist.linux-armv7l/wheel/dms_variants
2020-06-29T23:18:23,476   running install_egg_info
2020-06-29T23:18:23,521   running egg_info
2020-06-29T23:18:23,522   writing dms_variants.egg-info/PKG-INFO
2020-06-29T23:18:23,526   writing dependency_links to dms_variants.egg-info/dependency_links.txt
2020-06-29T23:18:23,529   writing requirements to dms_variants.egg-info/requires.txt
2020-06-29T23:18:23,532   writing top-level names to dms_variants.egg-info/top_level.txt
2020-06-29T23:18:23,542   reading manifest file 'dms_variants.egg-info/SOURCES.txt'
2020-06-29T23:18:23,588   writing manifest file 'dms_variants.egg-info/SOURCES.txt'
2020-06-29T23:18:23,592   Copying dms_variants.egg-info to build/bdist.linux-armv7l/wheel/dms_variants-0.7.0-py3.7.egg-info
2020-06-29T23:18:23,617   running install_scripts
2020-06-29T23:18:23,762   adding license file "LICENSE.txt" (matched pattern "LICEN[CS]E*")
2020-06-29T23:18:23,774   creating build/bdist.linux-armv7l/wheel/dms_variants-0.7.0.dist-info/WHEEL
2020-06-29T23:18:23,779   creating '/tmp/pip-wheel-gnxg9dvn/dms_variants-0.7.0-cp37-cp37m-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2020-06-29T23:18:23,785   adding 'dms_variants/__init__.py'
2020-06-29T23:18:23,801   adding 'dms_variants/_cutils.cpython-37m-arm-linux-gnueabihf.so'
2020-06-29T23:18:23,807   adding 'dms_variants/barcodes.py'
2020-06-29T23:18:23,812   adding 'dms_variants/binarymap.py'
2020-06-29T23:18:23,815   adding 'dms_variants/bottlenecks.py'
2020-06-29T23:18:23,835   adding 'dms_variants/codonvarianttable.py'
2020-06-29T23:18:23,840   adding 'dms_variants/constants.py'
2020-06-29T23:18:23,843   adding 'dms_variants/fastq.py'
2020-06-29T23:18:23,863   adding 'dms_variants/globalepistasis.py'
2020-06-29T23:18:23,869   adding 'dms_variants/illuminabarcodeparser.py'
2020-06-29T23:18:23,876   adding 'dms_variants/ispline.py'
2020-06-29T23:18:23,879   adding 'dms_variants/plotnine_themes.py'
2020-06-29T23:18:23,885   adding 'dms_variants/simulate.py'
2020-06-29T23:18:23,891   adding 'dms_variants/utils.py'
2020-06-29T23:18:23,896   adding 'dms_variants-0.7.0.dist-info/LICENSE.txt'
2020-06-29T23:18:23,898   adding 'dms_variants-0.7.0.dist-info/METADATA'
2020-06-29T23:18:23,900   adding 'dms_variants-0.7.0.dist-info/WHEEL'
2020-06-29T23:18:23,902   adding 'dms_variants-0.7.0.dist-info/top_level.txt'
2020-06-29T23:18:23,903   adding 'dms_variants-0.7.0.dist-info/RECORD'
2020-06-29T23:18:23,914   removing build/bdist.linux-armv7l/wheel
2020-06-29T23:18:24,079   Building wheel for dms-variants (setup.py): finished with status 'done'
2020-06-29T23:18:24,084   Created wheel for dms-variants: filename=dms_variants-0.7.0-cp37-cp37m-linux_armv7l.whl size=106104 sha256=a42a0f514f2f7512697234e578671e99ef893762fedfac2e4928a9f684d6c80b
2020-06-29T23:18:24,085   Stored in directory: /tmp/pip-ephem-wheel-cache-wn20mqb3/wheels/0a/16/c6/fb514ebc0a4df6f811f1ee37d5b557f4847fe11888244da044
2020-06-29T23:18:24,089 Successfully built dms-variants
2020-06-29T23:18:24,113 Removed build tracker: '/tmp/pip-req-tracker-mwtbqi7l'