2020-07-01T15:45:13,007 Created temporary directory: /tmp/pip-ephem-wheel-cache-6cm2vqpp 2020-07-01T15:45:13,013 Created temporary directory: /tmp/pip-req-tracker-6me4_yhd 2020-07-01T15:45:13,014 Initialized build tracking at /tmp/pip-req-tracker-6me4_yhd 2020-07-01T15:45:13,017 Created build tracker: /tmp/pip-req-tracker-6me4_yhd 2020-07-01T15:45:13,018 Entered build tracker: /tmp/pip-req-tracker-6me4_yhd 2020-07-01T15:45:13,020 Created temporary directory: /tmp/pip-wheel-cr_2iguf 2020-07-01T15:45:13,036 1 location(s) to search for versions of refgenie: 2020-07-01T15:45:13,036 * https://pypi.org/simple/refgenie/ 2020-07-01T15:45:13,037 Fetching project page and analyzing links: https://pypi.org/simple/refgenie/ 2020-07-01T15:45:13,039 Getting page https://pypi.org/simple/refgenie/ 2020-07-01T15:45:13,043 Found index url https://pypi.org/simple 2020-07-01T15:45:13,432 Found link https://files.pythonhosted.org/packages/17/54/a0cc0afa24f558e0be77f717080c10e371750e79ffb1ac501485ca4fdfea/refgenie-0.0.1.tar.gz#sha256=71d69e2c21b08e59c68c1ef46c41542faca4e91efbb46a5745e3b3e5e199882e (from https://pypi.org/simple/refgenie/), version: 0.0.1 2020-07-01T15:45:13,433 Found link https://files.pythonhosted.org/packages/d9/ba/078d0aaadb0f9a93e9db100b377680c6308f24eef02e5b2c68376a6f4d34/refgenie-0.3.0.tar.gz#sha256=167e78d6dc3071c42ea651bdad6a8438f7b99b285a631ec79a6718ffa0ec07d1 (from https://pypi.org/simple/refgenie/), version: 0.3.0 2020-07-01T15:45:13,434 Found link https://files.pythonhosted.org/packages/b4/22/f4d122acae18ccda74ffbc4bd9e4b02aae9d6fa0dd34f0abed84abf815da/refgenie-0.3.1.tar.gz#sha256=7acd535abaaa519d793fa3286dd03c14e65d34590d2c6bf273a108fcf07c943b (from https://pypi.org/simple/refgenie/), version: 0.3.1 2020-07-01T15:45:13,435 Found link https://files.pythonhosted.org/packages/e6/11/e570020cef6b691bf9f2b040d18b5fed4536972b31a0bcb4ce3e7be5c2b5/refgenie-0.3.2.tar.gz#sha256=27bdf63883dc46debeb65713271247ced4276801c15c21390b9a07a34a983dd8 (from https://pypi.org/simple/refgenie/), version: 0.3.2 2020-07-01T15:45:13,436 Found link https://files.pythonhosted.org/packages/f5/7c/baccfeed0ab702f60f27f29801089de8744793233e7e9acdcc0762f5dbe1/refgenie-0.4.0.tar.gz#sha256=aa4fb08141f881431d21eab5be1b2442aaeab385916b2a9299f2333765286b57 (from https://pypi.org/simple/refgenie/), version: 0.4.0 2020-07-01T15:45:13,437 Found link https://files.pythonhosted.org/packages/d2/01/2ef4810d4bbfae03bfc83ec42fcad0889d266bdb07145cd15b07cec010fc/refgenie-0.4.1.tar.gz#sha256=45b3aaf1cf4cc09f36faeb39ac6aff4a80087379f4a90da36cbca8f0a9be7af4 (from https://pypi.org/simple/refgenie/), version: 0.4.1 2020-07-01T15:45:13,437 Found link https://files.pythonhosted.org/packages/72/e8/bcdd841edaa175dca9baff44dfe19cfa9d657266695413453c7fa3750040/refgenie-0.4.2.tar.gz#sha256=970132fa7d93b42457e9bffed9dceb816d0b8033825054e73da8c055d93cd326 (from https://pypi.org/simple/refgenie/), version: 0.4.2 2020-07-01T15:45:13,438 Found link https://files.pythonhosted.org/packages/eb/0b/0f524131a16ed7f61525207b33961195a024c02b297945e0b8a2e1e00610/refgenie-0.4.3.tar.gz#sha256=1b58f786ec82a9b2504f809d903f012e283758148ed94fdc430adbcbe7794f71 (from https://pypi.org/simple/refgenie/), version: 0.4.3 2020-07-01T15:45:13,439 Found link https://files.pythonhosted.org/packages/70/83/55da1456345a0aa79188f7dbe5fc40cc926b218c969d371aa91cde4857e4/refgenie-0.4.4.tar.gz#sha256=89d7edcb304a3ca966b158748d366e9e12fdc1ce296b3397d16c6f65eaf7d25b (from https://pypi.org/simple/refgenie/), version: 0.4.4 2020-07-01T15:45:13,440 Found link https://files.pythonhosted.org/packages/8a/0e/6e3bdf10a74967c5f6a3724c39ac558579037784b7980753ac39fdf17e35/refgenie-0.5.0.tar.gz#sha256=b8cc4675eabc4b74e60c438fe263aa63bbf96561ba1f19b2d3818e5cdf4bad14 (from https://pypi.org/simple/refgenie/), version: 0.5.0 2020-07-01T15:45:13,441 Found link https://files.pythonhosted.org/packages/65/98/f8e654ecf4c3f151d7b2ff7a7d8fbbd5f25de1a6b4d32e5c9897910d2ae6/refgenie-0.6.0.tar.gz#sha256=585feade22c891a9f98d3e8e0d4f666696af6ae941c3e5731e438956e35a7877 (from https://pypi.org/simple/refgenie/), version: 0.6.0 2020-07-01T15:45:13,442 Found link https://files.pythonhosted.org/packages/c3/e1/1d9fcb262828ca2f82dd12aae59af7816059abfffbb0021128fdf9a9b5fb/refgenie-0.7.0.tar.gz#sha256=75cb7a9412d4e93b933989602939f79fff5c8910bec2651ad0f7f97dc7d57de5 (from https://pypi.org/simple/refgenie/), version: 0.7.0 2020-07-01T15:45:13,442 Found link https://files.pythonhosted.org/packages/a6/ea/cd1485a9f10db3b79601088efaf3929858813f46c906548ba47f0dcab9a6/refgenie-0.7.1.tar.gz#sha256=1d391357b82f9e05a71b945666c33c013e6ef2207a0e794ee33f602f433916ad (from https://pypi.org/simple/refgenie/), version: 0.7.1 2020-07-01T15:45:13,443 Found link https://files.pythonhosted.org/packages/b2/19/d8233d168bc5f5dfb189bca53165dcb3120e1ca120a18a3f8f89727a5106/refgenie-0.7.2.tar.gz#sha256=5f2a57c41bbb9eba549757df57c533b9b98c7c3cc7feb0cc04a670a15291405b (from https://pypi.org/simple/refgenie/), version: 0.7.2 2020-07-01T15:45:13,444 Found link https://files.pythonhosted.org/packages/03/46/91c1cf4d4cee5d4caaf83337c4d1246b283e7abf389fdb2486109acb7b03/refgenie-0.8.0.tar.gz#sha256=70fbaad444149f10f1153588399a67254d1f3f39b1505d48b5f77e3457aa9c24 (from https://pypi.org/simple/refgenie/), version: 0.8.0 2020-07-01T15:45:13,445 Found link https://files.pythonhosted.org/packages/c3/65/11c4c959aa5cfeb06b90023bd09da1d2ea22b07f8c311bb560da8ac5306f/refgenie-0.8.1.tar.gz#sha256=4f507780c08809fbfd64554f76fa17e6bc83b76f0612767a487a62e8b827aa38 (from https://pypi.org/simple/refgenie/), version: 0.8.1 2020-07-01T15:45:13,446 Found link https://files.pythonhosted.org/packages/83/66/1d9fc71cbbb381300081d3a050e9c16bdc719c19dd6964d46c58555f8b9e/refgenie-0.8.2.tar.gz#sha256=dca32279f3021fe7a5318b834cb9e5c36eda12a6d86f99f01ee174ebe79de60c (from https://pypi.org/simple/refgenie/), version: 0.8.2 2020-07-01T15:45:13,447 Found link https://files.pythonhosted.org/packages/96/5a/918928e5e45c2b98065ab2019406ef16dc592099c01f5ff64effc6cf0f3b/refgenie-0.9.0.tar.gz#sha256=160e275f5f30026b74ec87732d012215426df09d183cd77a761813ec0b4ff549 (from https://pypi.org/simple/refgenie/), version: 0.9.0 2020-07-01T15:45:13,448 Found link https://files.pythonhosted.org/packages/de/0d/49c66c81875cd70d2dd98c26bfa5be7e12ae324929e8f1be6ce3015e653a/refgenie-0.9.1.tar.gz#sha256=e5e669c7d158659163073fa9c4140fc2aff3c7d7d681c0a26e5358a977412593 (from https://pypi.org/simple/refgenie/), version: 0.9.1 2020-07-01T15:45:13,448 Skipping link: No binaries permitted for refgenie: https://files.pythonhosted.org/packages/7b/40/a537d12b74e73cef6e6d723575180f751d67c9b8eea5bd47f037730f1a32/refgenie-0.9.2-py3-none-any.whl#sha256=102542a368e33ea6b38ee617cf18c2350d86a19cabd77198f049b437822370d5 (from https://pypi.org/simple/refgenie/) 2020-07-01T15:45:13,449 Found link https://files.pythonhosted.org/packages/ce/b3/769fb039c3cd2a5c5f8d0b7f44c5a5ae9b85e3ed69989ff850c114eb1da8/refgenie-0.9.2.tar.gz#sha256=bd1e4d7723c57288311d1afe9898542943303378095cf2bc9c2ba80f090f2dd9 (from https://pypi.org/simple/refgenie/), version: 0.9.2 2020-07-01T15:45:13,467 Given no hashes to check 1 links for project 'refgenie': discarding no candidates 2020-07-01T15:45:13,469 Using version 0.9.2 (newest of versions: 0.9.2) 2020-07-01T15:45:13,476 Collecting refgenie==0.9.2 2020-07-01T15:45:13,480 Created temporary directory: /tmp/pip-unpack-pmb3cazw 2020-07-01T15:45:13,712 Downloading refgenie-0.9.2.tar.gz (29 kB) 2020-07-01T15:45:13,902 Added refgenie==0.9.2 from https://files.pythonhosted.org/packages/ce/b3/769fb039c3cd2a5c5f8d0b7f44c5a5ae9b85e3ed69989ff850c114eb1da8/refgenie-0.9.2.tar.gz#sha256=bd1e4d7723c57288311d1afe9898542943303378095cf2bc9c2ba80f090f2dd9 to build tracker '/tmp/pip-req-tracker-6me4_yhd' 2020-07-01T15:45:13,905 Running setup.py (path:/tmp/pip-wheel-cr_2iguf/refgenie/setup.py) egg_info for package refgenie 2020-07-01T15:45:13,907 Created temporary directory: /tmp/pip-pip-egg-info-wqx1dv6r 2020-07-01T15:45:13,908 Running command python setup.py egg_info 2020-07-01T15:45:16,376 running egg_info 2020-07-01T15:45:16,383 creating /tmp/pip-pip-egg-info-wqx1dv6r/refgenie.egg-info 2020-07-01T15:45:16,385 writing /tmp/pip-pip-egg-info-wqx1dv6r/refgenie.egg-info/PKG-INFO 2020-07-01T15:45:16,390 writing entry points to /tmp/pip-pip-egg-info-wqx1dv6r/refgenie.egg-info/entry_points.txt 2020-07-01T15:45:16,393 writing requirements to /tmp/pip-pip-egg-info-wqx1dv6r/refgenie.egg-info/requires.txt 2020-07-01T15:45:16,395 writing dependency_links to /tmp/pip-pip-egg-info-wqx1dv6r/refgenie.egg-info/dependency_links.txt 2020-07-01T15:45:16,399 writing top-level names to /tmp/pip-pip-egg-info-wqx1dv6r/refgenie.egg-info/top_level.txt 2020-07-01T15:45:16,402 writing manifest file '/tmp/pip-pip-egg-info-wqx1dv6r/refgenie.egg-info/SOURCES.txt' 2020-07-01T15:45:16,760 reading manifest file '/tmp/pip-pip-egg-info-wqx1dv6r/refgenie.egg-info/SOURCES.txt' 2020-07-01T15:45:16,764 reading manifest template 'MANIFEST.in' 2020-07-01T15:45:16,774 writing manifest file '/tmp/pip-pip-egg-info-wqx1dv6r/refgenie.egg-info/SOURCES.txt' 2020-07-01T15:45:16,776 Pandoc conversion succeeded. 2020-07-01T15:45:16,924 Source in /tmp/pip-wheel-cr_2iguf/refgenie has version 0.9.2, which satisfies requirement refgenie==0.9.2 from https://files.pythonhosted.org/packages/ce/b3/769fb039c3cd2a5c5f8d0b7f44c5a5ae9b85e3ed69989ff850c114eb1da8/refgenie-0.9.2.tar.gz#sha256=bd1e4d7723c57288311d1afe9898542943303378095cf2bc9c2ba80f090f2dd9 2020-07-01T15:45:16,926 Removed refgenie==0.9.2 from https://files.pythonhosted.org/packages/ce/b3/769fb039c3cd2a5c5f8d0b7f44c5a5ae9b85e3ed69989ff850c114eb1da8/refgenie-0.9.2.tar.gz#sha256=bd1e4d7723c57288311d1afe9898542943303378095cf2bc9c2ba80f090f2dd9 from build tracker '/tmp/pip-req-tracker-6me4_yhd' 2020-07-01T15:45:16,929 Building wheels for collected packages: refgenie 2020-07-01T15:45:16,939 Created temporary directory: /tmp/pip-wheel-8cv2cjsk 2020-07-01T15:45:16,940 Building wheel for refgenie (setup.py): started 2020-07-01T15:45:16,940 Destination directory: /tmp/pip-wheel-8cv2cjsk 2020-07-01T15:45:16,941 Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-cr_2iguf/refgenie/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-cr_2iguf/refgenie/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-8cv2cjsk 2020-07-01T15:45:19,461 running bdist_wheel 2020-07-01T15:45:19,476 running build 2020-07-01T15:45:19,477 running build_py 2020-07-01T15:45:19,829 creating build 2020-07-01T15:45:19,831 creating build/lib 2020-07-01T15:45:19,833 creating build/lib/refgenie 2020-07-01T15:45:19,836 copying refgenie/_version.py -> build/lib/refgenie 2020-07-01T15:45:19,841 copying refgenie/add_assets_igenome.py -> build/lib/refgenie 2020-07-01T15:45:19,848 copying refgenie/build_all_genome.py -> build/lib/refgenie 2020-07-01T15:45:19,853 copying refgenie/asset_build_packages.py -> build/lib/refgenie 2020-07-01T15:45:19,862 copying refgenie/refget.py -> build/lib/refgenie 2020-07-01T15:45:19,870 copying refgenie/exceptions.py -> build/lib/refgenie 2020-07-01T15:45:19,875 copying refgenie/__init__.py -> build/lib/refgenie 2020-07-01T15:45:19,880 copying refgenie/refgenie.py -> build/lib/refgenie 2020-07-01T15:45:19,890 copying refgenie/const.py -> build/lib/refgenie 2020-07-01T15:45:19,895 copying refgenie/__main__.py -> build/lib/refgenie 2020-07-01T15:45:19,898 running egg_info 2020-07-01T15:45:19,930 writing dependency_links to refgenie.egg-info/dependency_links.txt 2020-07-01T15:45:19,933 writing entry points to refgenie.egg-info/entry_points.txt 2020-07-01T15:45:19,936 writing refgenie.egg-info/PKG-INFO 2020-07-01T15:45:19,940 writing requirements to refgenie.egg-info/requires.txt 2020-07-01T15:45:19,942 writing top-level names to refgenie.egg-info/top_level.txt 2020-07-01T15:45:19,953 reading manifest file 'refgenie.egg-info/SOURCES.txt' 2020-07-01T15:45:19,960 reading manifest template 'MANIFEST.in' 2020-07-01T15:45:19,974 writing manifest file 'refgenie.egg-info/SOURCES.txt' 2020-07-01T15:45:19,980 copying refgenie/refgenie.yaml -> build/lib/refgenie 2020-07-01T15:45:19,985 /usr/local/lib/python3.5/dist-packages/setuptools/lib2to3_ex.py:44: SetuptoolsDeprecationWarning: 2to3 support is deprecated. If the project still requires Python 2 support, please migrate to a single-codebase solution or employ an independent conversion process. 2020-07-01T15:45:19,986 SetuptoolsDeprecationWarning) 2020-07-01T15:45:19,987 Fixing build/lib/refgenie/_version.py build/lib/refgenie/add_assets_igenome.py build/lib/refgenie/build_all_genome.py build/lib/refgenie/asset_build_packages.py build/lib/refgenie/refget.py build/lib/refgenie/exceptions.py build/lib/refgenie/__init__.py build/lib/refgenie/refgenie.py build/lib/refgenie/const.py build/lib/refgenie/__main__.py 2020-07-01T15:45:20,115 Skipping optional fixer: buffer 2020-07-01T15:45:20,543 Skipping optional fixer: idioms 2020-07-01T15:45:21,524 Skipping optional fixer: set_literal 2020-07-01T15:45:22,051 Skipping optional fixer: ws_comma 2020-07-01T15:45:28,329 Fixing build/lib/refgenie/_version.py build/lib/refgenie/add_assets_igenome.py build/lib/refgenie/build_all_genome.py build/lib/refgenie/asset_build_packages.py build/lib/refgenie/refget.py build/lib/refgenie/exceptions.py build/lib/refgenie/__init__.py build/lib/refgenie/refgenie.py build/lib/refgenie/const.py build/lib/refgenie/__main__.py 2020-07-01T15:45:28,430 Skipping optional fixer: buffer 2020-07-01T15:45:28,807 Skipping optional fixer: idioms 2020-07-01T15:45:29,863 Skipping optional fixer: set_literal 2020-07-01T15:45:30,313 Skipping optional fixer: ws_comma 2020-07-01T15:45:31,002 installing to build/bdist.linux-armv7l/wheel 2020-07-01T15:45:31,003 running install 2020-07-01T15:45:31,005 running install_lib 2020-07-01T15:45:31,018 creating build/bdist.linux-armv7l 2020-07-01T15:45:31,019 creating build/bdist.linux-armv7l/wheel 2020-07-01T15:45:31,024 creating build/bdist.linux-armv7l/wheel/refgenie 2020-07-01T15:45:31,026 copying build/lib/refgenie/_version.py -> build/bdist.linux-armv7l/wheel/refgenie 2020-07-01T15:45:31,030 copying build/lib/refgenie/add_assets_igenome.py -> build/bdist.linux-armv7l/wheel/refgenie 2020-07-01T15:45:31,040 copying build/lib/refgenie/build_all_genome.py -> build/bdist.linux-armv7l/wheel/refgenie 2020-07-01T15:45:31,041 copying build/lib/refgenie/asset_build_packages.py -> build/bdist.linux-armv7l/wheel/refgenie 2020-07-01T15:45:31,045 copying build/lib/refgenie/refget.py -> build/bdist.linux-armv7l/wheel/refgenie 2020-07-01T15:45:31,049 copying build/lib/refgenie/exceptions.py -> build/bdist.linux-armv7l/wheel/refgenie 2020-07-01T15:45:31,053 copying build/lib/refgenie/__init__.py -> build/bdist.linux-armv7l/wheel/refgenie 2020-07-01T15:45:31,056 copying build/lib/refgenie/refgenie.yaml -> build/bdist.linux-armv7l/wheel/refgenie 2020-07-01T15:45:31,060 copying build/lib/refgenie/refgenie.py -> build/bdist.linux-armv7l/wheel/refgenie 2020-07-01T15:45:31,069 copying build/lib/refgenie/const.py -> build/bdist.linux-armv7l/wheel/refgenie 2020-07-01T15:45:31,073 copying build/lib/refgenie/__main__.py -> build/bdist.linux-armv7l/wheel/refgenie 2020-07-01T15:45:31,076 running install_egg_info 2020-07-01T15:45:31,092 Copying refgenie.egg-info to build/bdist.linux-armv7l/wheel/refgenie-0.9.2-py3.5.egg-info 2020-07-01T15:45:31,126 running install_scripts 2020-07-01T15:45:31,284 creating build/bdist.linux-armv7l/wheel/refgenie-0.9.2.dist-info/WHEEL 2020-07-01T15:45:31,383 Pandoc conversion succeeded. 2020-07-01T15:45:31,674 Building wheel for refgenie (setup.py): finished with status 'done' 2020-07-01T15:45:31,678 Created wheel for refgenie: filename=refgenie-0.9.2-py3-none-any.whl size=26775 sha256=b89376a6fa922456e3db42eac12f2254902c80a65af9e9a4df7df6eb09c1edb4 2020-07-01T15:45:31,679 Stored in directory: /tmp/pip-ephem-wheel-cache-6cm2vqpp/wheels/9d/bc/24/ab6ea0a6d0ac0028f44a5452a8be4fe635c9a04605b6c01797 2020-07-01T15:45:31,684 Successfully built refgenie 2020-07-01T15:45:31,696 Removed build tracker: '/tmp/pip-req-tracker-6me4_yhd'