2020-07-03T03:58:36,950 Created temporary directory: /tmp/pip-ephem-wheel-cache-rr7_wayq
2020-07-03T03:58:36,954 Created temporary directory: /tmp/pip-req-tracker-p776ou3l
2020-07-03T03:58:36,955 Initialized build tracking at /tmp/pip-req-tracker-p776ou3l
2020-07-03T03:58:36,957 Created build tracker: /tmp/pip-req-tracker-p776ou3l
2020-07-03T03:58:36,958 Entered build tracker: /tmp/pip-req-tracker-p776ou3l
2020-07-03T03:58:36,959 Created temporary directory: /tmp/pip-wheel-v55u0n6y
2020-07-03T03:58:36,978 1 location(s) to search for versions of mgatk:
2020-07-03T03:58:36,978 * https://pypi.org/simple/mgatk/
2020-07-03T03:58:36,978 Fetching project page and analyzing links: https://pypi.org/simple/mgatk/
2020-07-03T03:58:36,980 Getting page https://pypi.org/simple/mgatk/
2020-07-03T03:58:36,984 Found index url https://pypi.org/simple
2020-07-03T03:58:37,301   Found link https://files.pythonhosted.org/packages/8f/0c/47da433403828d2e53de436d7689af32d8ee5130dc1c748ce0175d0f2eb1/mgatk-0.0.1.tar.gz#sha256=f0a66229c6057d0cc66db65b33141cd22a3ebc0a4ede501e4887014b5a56643b (from https://pypi.org/simple/mgatk/), version: 0.0.1
2020-07-03T03:58:37,302   Found link https://files.pythonhosted.org/packages/f7/7f/f09842055b19e670fbc309415123b423d30cc0fd1a8c430785bd1754827f/mgatk-0.1.0.tar.gz#sha256=bcfea43a3fb2d22b7c5cbecf59fd3989ef03250f87378b33e889b4054e275166 (from https://pypi.org/simple/mgatk/), version: 0.1.0
2020-07-03T03:58:37,303   Found link https://files.pythonhosted.org/packages/b7/8e/ac9ab509199f852d88097608e3fb60fc85232c87a36a062a041043ea869d/mgatk-0.2.5.tar.gz#sha256=b16329f84786ef87490379db121816b103fe5339ed90fb395e0a9c4ef5028d6e (from https://pypi.org/simple/mgatk/), version: 0.2.5
2020-07-03T03:58:37,304   Found link https://files.pythonhosted.org/packages/74/28/da183d0b56f401dec7f3bded24c50a02396e56c4f995fd50a3cf21c4381d/mgatk-0.5.0.tar.gz#sha256=61ee4d3c18cf696ecfbea6ab5dd9bfebf9791c368a04cfc2d1afcdfe16a6d3ca (from https://pypi.org/simple/mgatk/), version: 0.5.0
2020-07-03T03:58:37,304   Found link https://files.pythonhosted.org/packages/96/e8/e35c039eac8d418ca9213b1db69c4176b59783ca43638a75e824b475197d/mgatk-0.5.1.tar.gz#sha256=518ef6a1d25d9f889a306514eaf1ade02146fce28a43866a60dc6f1dad81b54c (from https://pypi.org/simple/mgatk/), version: 0.5.1
2020-07-03T03:58:37,305   Found link https://files.pythonhosted.org/packages/b6/16/d11afe05a803f23995d04af8fd832473fa1d21f73f242340f6086eb97183/mgatk-0.5.3.tar.gz#sha256=d9b78751af0fe8c31d22508a24ef061d7478c8a2c6283eded971f8802f060f79 (from https://pypi.org/simple/mgatk/), version: 0.5.3
2020-07-03T03:58:37,306   Found link https://files.pythonhosted.org/packages/be/5f/896adc0419fad47b3434866dd68deb7b93a1328916be0eb1f0827393633e/mgatk-0.5.5.tar.gz#sha256=bcc0470b4d01e5cd5d5e67f87720101fc4db889a0c5a4ef35c7d7224989d60a7 (from https://pypi.org/simple/mgatk/), version: 0.5.5
2020-07-03T03:58:37,307   Found link https://files.pythonhosted.org/packages/d0/3d/4a67edbf2648ab25ee6b2361e454638ecd5de6753a0c5f3de21975a7c5bd/mgatk-0.5.6.tar.gz#sha256=9a5f51c87b26221644ab12b675f4334efc1d3339b32065cd5c5ac2b512350ee6 (from https://pypi.org/simple/mgatk/), version: 0.5.6
2020-07-03T03:58:37,319 Given no hashes to check 1 links for project 'mgatk': discarding no candidates
2020-07-03T03:58:37,320 Using version 0.5.6 (newest of versions: 0.5.6)
2020-07-03T03:58:37,327 Collecting mgatk==0.5.6
2020-07-03T03:58:37,332   Created temporary directory: /tmp/pip-unpack-kwf8r2ci
2020-07-03T03:58:37,997   Downloading mgatk-0.5.6.tar.gz (14.3 MB)
2020-07-03T03:58:43,612   Added mgatk==0.5.6 from https://files.pythonhosted.org/packages/d0/3d/4a67edbf2648ab25ee6b2361e454638ecd5de6753a0c5f3de21975a7c5bd/mgatk-0.5.6.tar.gz#sha256=9a5f51c87b26221644ab12b675f4334efc1d3339b32065cd5c5ac2b512350ee6 to build tracker '/tmp/pip-req-tracker-p776ou3l'
2020-07-03T03:58:43,614     Running setup.py (path:/tmp/pip-wheel-v55u0n6y/mgatk/setup.py) egg_info for package mgatk
2020-07-03T03:58:43,616     Created temporary directory: /tmp/pip-pip-egg-info-vp0cemwn
2020-07-03T03:58:43,616     Running command python setup.py egg_info
2020-07-03T03:58:45,705     running egg_info
2020-07-03T03:58:45,712     creating /tmp/pip-pip-egg-info-vp0cemwn/mgatk.egg-info
2020-07-03T03:58:45,715     writing /tmp/pip-pip-egg-info-vp0cemwn/mgatk.egg-info/PKG-INFO
2020-07-03T03:58:45,722     writing requirements to /tmp/pip-pip-egg-info-vp0cemwn/mgatk.egg-info/requires.txt
2020-07-03T03:58:45,726     writing entry points to /tmp/pip-pip-egg-info-vp0cemwn/mgatk.egg-info/entry_points.txt
2020-07-03T03:58:45,729     writing dependency_links to /tmp/pip-pip-egg-info-vp0cemwn/mgatk.egg-info/dependency_links.txt
2020-07-03T03:58:45,732     writing top-level names to /tmp/pip-pip-egg-info-vp0cemwn/mgatk.egg-info/top_level.txt
2020-07-03T03:58:45,737     writing manifest file '/tmp/pip-pip-egg-info-vp0cemwn/mgatk.egg-info/SOURCES.txt'
2020-07-03T03:58:46,091     reading manifest file '/tmp/pip-pip-egg-info-vp0cemwn/mgatk.egg-info/SOURCES.txt'
2020-07-03T03:58:46,095     reading manifest template 'MANIFEST.in'
2020-07-03T03:58:46,099     no previously-included directories found matching 'mgatk.egg-info/'
2020-07-03T03:58:46,101     no previously-included directories found matching 'tests/'
2020-07-03T03:58:46,103     no previously-included directories found matching '*.DS_Store'
2020-07-03T03:58:46,185     writing manifest file '/tmp/pip-pip-egg-info-vp0cemwn/mgatk.egg-info/SOURCES.txt'
2020-07-03T03:58:46,322   Source in /tmp/pip-wheel-v55u0n6y/mgatk has version 0.5.6, which satisfies requirement mgatk==0.5.6 from https://files.pythonhosted.org/packages/d0/3d/4a67edbf2648ab25ee6b2361e454638ecd5de6753a0c5f3de21975a7c5bd/mgatk-0.5.6.tar.gz#sha256=9a5f51c87b26221644ab12b675f4334efc1d3339b32065cd5c5ac2b512350ee6
2020-07-03T03:58:46,324   Removed mgatk==0.5.6 from https://files.pythonhosted.org/packages/d0/3d/4a67edbf2648ab25ee6b2361e454638ecd5de6753a0c5f3de21975a7c5bd/mgatk-0.5.6.tar.gz#sha256=9a5f51c87b26221644ab12b675f4334efc1d3339b32065cd5c5ac2b512350ee6 from build tracker '/tmp/pip-req-tracker-p776ou3l'
2020-07-03T03:58:46,328 Building wheels for collected packages: mgatk
2020-07-03T03:58:46,337   Created temporary directory: /tmp/pip-wheel-f318gr_q
2020-07-03T03:58:46,338   Building wheel for mgatk (setup.py): started
2020-07-03T03:58:46,339   Destination directory: /tmp/pip-wheel-f318gr_q
2020-07-03T03:58:46,339   Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-v55u0n6y/mgatk/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-v55u0n6y/mgatk/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-f318gr_q
2020-07-03T03:58:48,583   running bdist_wheel
2020-07-03T03:58:48,599   running build
2020-07-03T03:58:48,600   running build_py
2020-07-03T03:58:48,938   creating build
2020-07-03T03:58:48,939   creating build/lib
2020-07-03T03:58:48,942   creating build/lib/mgatk
2020-07-03T03:58:48,945   copying mgatk/cli.py -> build/lib/mgatk
2020-07-03T03:58:48,952   copying mgatk/__init__.py -> build/lib/mgatk
2020-07-03T03:58:48,957   copying mgatk/mgatkHelp.py -> build/lib/mgatk
2020-07-03T03:58:48,962   running egg_info
2020-07-03T03:58:48,992   writing entry points to mgatk.egg-info/entry_points.txt
2020-07-03T03:58:48,995   writing top-level names to mgatk.egg-info/top_level.txt
2020-07-03T03:58:48,997   writing mgatk.egg-info/PKG-INFO
2020-07-03T03:58:49,003   writing requirements to mgatk.egg-info/requires.txt
2020-07-03T03:58:49,006   writing dependency_links to mgatk.egg-info/dependency_links.txt
2020-07-03T03:58:49,016   reading manifest file 'mgatk.egg-info/SOURCES.txt'
2020-07-03T03:58:49,023   reading manifest template 'MANIFEST.in'
2020-07-03T03:58:49,027   no previously-included directories found matching 'tests/'
2020-07-03T03:58:49,029   no previously-included directories found matching '*.DS_Store'
2020-07-03T03:58:49,108   writing manifest file 'mgatk.egg-info/SOURCES.txt'
2020-07-03T03:58:49,122   copying mgatk/.DS_Store -> build/lib/mgatk
2020-07-03T03:58:49,129   copying mgatk/devnotes.md -> build/lib/mgatk
2020-07-03T03:58:49,135   creating build/lib/mgatk/__pycache__
2020-07-03T03:58:49,137   copying mgatk/__pycache__/__init__.cpython-36.pyc -> build/lib/mgatk/__pycache__
2020-07-03T03:58:49,144   copying mgatk/__pycache__/cli.cpython-36.pyc -> build/lib/mgatk/__pycache__
2020-07-03T03:58:49,153   copying mgatk/__pycache__/mgatkHelp.cpython-36.pyc -> build/lib/mgatk/__pycache__
2020-07-03T03:58:49,162   creating build/lib/mgatk/bin
2020-07-03T03:58:49,165   copying mgatk/bin/.DS_Store -> build/lib/mgatk/bin
2020-07-03T03:58:49,173   copying mgatk/bin/picard.jar -> build/lib/mgatk/bin
2020-07-03T03:58:50,576   creating build/lib/mgatk/bin/R
2020-07-03T03:58:50,579   copying mgatk/bin/R/toRDS.R -> build/lib/mgatk/bin/R
2020-07-03T03:58:50,586   creating build/lib/mgatk/bin/anno
2020-07-03T03:58:50,588   creating build/lib/mgatk/bin/anno/fasta
2020-07-03T03:58:50,591   copying mgatk/bin/anno/fasta/GRCh37.fasta -> build/lib/mgatk/bin/anno/fasta
2020-07-03T03:58:50,599   copying mgatk/bin/anno/fasta/GRCh38.fasta -> build/lib/mgatk/bin/anno/fasta
2020-07-03T03:58:50,606   copying mgatk/bin/anno/fasta/GRCh38.fasta.fai -> build/lib/mgatk/bin/anno/fasta
2020-07-03T03:58:50,612   copying mgatk/bin/anno/fasta/GRCm38.fasta -> build/lib/mgatk/bin/anno/fasta
2020-07-03T03:58:50,620   copying mgatk/bin/anno/fasta/GRCz10.fasta -> build/lib/mgatk/bin/anno/fasta
2020-07-03T03:58:50,630   copying mgatk/bin/anno/fasta/NC_012920.fasta -> build/lib/mgatk/bin/anno/fasta
2020-07-03T03:58:50,639   copying mgatk/bin/anno/fasta/hg19.fasta -> build/lib/mgatk/bin/anno/fasta
2020-07-03T03:58:50,646   copying mgatk/bin/anno/fasta/hg19_chrM.fasta -> build/lib/mgatk/bin/anno/fasta
2020-07-03T03:58:50,654   copying mgatk/bin/anno/fasta/hg38.fasta -> build/lib/mgatk/bin/anno/fasta
2020-07-03T03:58:50,663   copying mgatk/bin/anno/fasta/mm10.fasta -> build/lib/mgatk/bin/anno/fasta
2020-07-03T03:58:50,673   copying mgatk/bin/anno/fasta/mm9.fasta -> build/lib/mgatk/bin/anno/fasta
2020-07-03T03:58:50,681   copying mgatk/bin/anno/fasta/rCRS.fasta -> build/lib/mgatk/bin/anno/fasta
2020-07-03T03:58:50,688   creating build/lib/mgatk/bin/python
2020-07-03T03:58:50,691   copying mgatk/bin/python/chunk_barcoded_bam.py -> build/lib/mgatk/bin/python
2020-07-03T03:58:50,698   copying mgatk/bin/python/filterClipBam.py -> build/lib/mgatk/bin/python
2020-07-03T03:58:50,706   copying mgatk/bin/python/find_barcodes.py -> build/lib/mgatk/bin/python
2020-07-03T03:58:50,713   copying mgatk/bin/python/oneSample.py -> build/lib/mgatk/bin/python
2020-07-03T03:58:50,720   copying mgatk/bin/python/split_barcoded_bam.py -> build/lib/mgatk/bin/python
2020-07-03T03:58:50,726   copying mgatk/bin/python/sumstatsBP.py -> build/lib/mgatk/bin/python
2020-07-03T03:58:50,732   copying mgatk/bin/python/sumstatsBPtenx.py -> build/lib/mgatk/bin/python
2020-07-03T03:58:50,738   creating build/lib/mgatk/bin/snake
2020-07-03T03:58:50,741   copying mgatk/bin/snake/Snakefile.Gather -> build/lib/mgatk/bin/snake
2020-07-03T03:58:50,750   copying mgatk/bin/snake/Snakefile.Scatter -> build/lib/mgatk/bin/snake
2020-07-03T03:58:50,758   copying mgatk/bin/snake/Snakefile.tenx -> build/lib/mgatk/bin/snake
2020-07-03T03:58:50,765   creating build/lib/mgatk/del
2020-07-03T03:58:50,768   copying mgatk/del/.DS_Store -> build/lib/mgatk/del
2020-07-03T03:58:50,775   copying mgatk/del/clidel.py -> build/lib/mgatk/del
2020-07-03T03:58:50,781   copying mgatk/del/clifind.py -> build/lib/mgatk/del
2020-07-03T03:58:50,787   creating build/lib/mgatk/del/__pycache__
2020-07-03T03:58:50,790   copying mgatk/del/__pycache__/clidel.cpython-36.pyc -> build/lib/mgatk/del/__pycache__
2020-07-03T03:58:50,797   copying mgatk/del/__pycache__/clifind.cpython-36.pyc -> build/lib/mgatk/del/__pycache__
2020-07-03T03:58:50,803   creating build/lib/mgatk/del/bulk_del
2020-07-03T03:58:50,805   copying mgatk/del/bulk_del/plot_deletion_breaks_bulk.R -> build/lib/mgatk/del/bulk_del
2020-07-03T03:58:50,811   creating build/lib/mgatk/del/singles_del
2020-07-03T03:58:50,814   copying mgatk/del/singles_del/01_process_cell_reads.py -> build/lib/mgatk/del/singles_del
2020-07-03T03:58:50,820   copying mgatk/del/singles_del/02_heteroplasmy_del_singles.R -> build/lib/mgatk/del/singles_del
2020-07-03T03:58:50,828   copying mgatk/del/singles_del/Snakefile.delSingles -> build/lib/mgatk/del/singles_del
2020-07-03T03:58:50,846   installing to build/bdist.linux-armv7l/wheel
2020-07-03T03:58:50,847   running install
2020-07-03T03:58:50,850   running install_lib
2020-07-03T03:58:50,858   creating build/bdist.linux-armv7l
2020-07-03T03:58:50,860   creating build/bdist.linux-armv7l/wheel
2020-07-03T03:58:50,865   creating build/bdist.linux-armv7l/wheel/mgatk
2020-07-03T03:58:50,869   creating build/bdist.linux-armv7l/wheel/mgatk/__pycache__
2020-07-03T03:58:50,872   copying build/lib/mgatk/__pycache__/mgatkHelp.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/mgatk/__pycache__
2020-07-03T03:58:50,878   copying build/lib/mgatk/__pycache__/cli.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/mgatk/__pycache__
2020-07-03T03:58:50,886   copying build/lib/mgatk/__pycache__/__init__.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/mgatk/__pycache__
2020-07-03T03:58:50,893   copying build/lib/mgatk/devnotes.md -> build/bdist.linux-armv7l/wheel/mgatk
2020-07-03T03:58:50,900   copying build/lib/mgatk/.DS_Store -> build/bdist.linux-armv7l/wheel/mgatk
2020-07-03T03:58:50,908   creating build/bdist.linux-armv7l/wheel/mgatk/bin
2020-07-03T03:58:50,912   creating build/bdist.linux-armv7l/wheel/mgatk/bin/R
2020-07-03T03:58:50,915   copying build/lib/mgatk/bin/R/toRDS.R -> build/bdist.linux-armv7l/wheel/mgatk/bin/R
2020-07-03T03:58:50,923   creating build/bdist.linux-armv7l/wheel/mgatk/bin/anno
2020-07-03T03:58:50,929   creating build/bdist.linux-armv7l/wheel/mgatk/bin/anno/fasta
2020-07-03T03:58:50,933   copying build/lib/mgatk/bin/anno/fasta/hg38.fasta -> build/bdist.linux-armv7l/wheel/mgatk/bin/anno/fasta
2020-07-03T03:58:50,943   copying build/lib/mgatk/bin/anno/fasta/GRCh37.fasta -> build/bdist.linux-armv7l/wheel/mgatk/bin/anno/fasta
2020-07-03T03:58:50,950   copying build/lib/mgatk/bin/anno/fasta/GRCh38.fasta -> build/bdist.linux-armv7l/wheel/mgatk/bin/anno/fasta
2020-07-03T03:58:50,957   copying build/lib/mgatk/bin/anno/fasta/GRCm38.fasta -> build/bdist.linux-armv7l/wheel/mgatk/bin/anno/fasta
2020-07-03T03:58:50,964   copying build/lib/mgatk/bin/anno/fasta/hg19_chrM.fasta -> build/bdist.linux-armv7l/wheel/mgatk/bin/anno/fasta
2020-07-03T03:58:50,973   copying build/lib/mgatk/bin/anno/fasta/rCRS.fasta -> build/bdist.linux-armv7l/wheel/mgatk/bin/anno/fasta
2020-07-03T03:58:50,982   copying build/lib/mgatk/bin/anno/fasta/GRCh38.fasta.fai -> build/bdist.linux-armv7l/wheel/mgatk/bin/anno/fasta
2020-07-03T03:58:50,988   copying build/lib/mgatk/bin/anno/fasta/NC_012920.fasta -> build/bdist.linux-armv7l/wheel/mgatk/bin/anno/fasta
2020-07-03T03:58:50,995   copying build/lib/mgatk/bin/anno/fasta/hg19.fasta -> build/bdist.linux-armv7l/wheel/mgatk/bin/anno/fasta
2020-07-03T03:58:51,002   copying build/lib/mgatk/bin/anno/fasta/GRCz10.fasta -> build/bdist.linux-armv7l/wheel/mgatk/bin/anno/fasta
2020-07-03T03:58:51,010   copying build/lib/mgatk/bin/anno/fasta/mm10.fasta -> build/bdist.linux-armv7l/wheel/mgatk/bin/anno/fasta
2020-07-03T03:58:51,018   copying build/lib/mgatk/bin/anno/fasta/mm9.fasta -> build/bdist.linux-armv7l/wheel/mgatk/bin/anno/fasta
2020-07-03T03:58:51,026   copying build/lib/mgatk/bin/picard.jar -> build/bdist.linux-armv7l/wheel/mgatk/bin
2020-07-03T03:58:52,438   copying build/lib/mgatk/bin/.DS_Store -> build/bdist.linux-armv7l/wheel/mgatk/bin
2020-07-03T03:58:52,445   creating build/bdist.linux-armv7l/wheel/mgatk/bin/python
2020-07-03T03:58:52,447   copying build/lib/mgatk/bin/python/sumstatsBP.py -> build/bdist.linux-armv7l/wheel/mgatk/bin/python
2020-07-03T03:58:52,452   copying build/lib/mgatk/bin/python/oneSample.py -> build/bdist.linux-armv7l/wheel/mgatk/bin/python
2020-07-03T03:58:52,456   copying build/lib/mgatk/bin/python/chunk_barcoded_bam.py -> build/bdist.linux-armv7l/wheel/mgatk/bin/python
2020-07-03T03:58:52,461   copying build/lib/mgatk/bin/python/split_barcoded_bam.py -> build/bdist.linux-armv7l/wheel/mgatk/bin/python
2020-07-03T03:58:52,466   copying build/lib/mgatk/bin/python/filterClipBam.py -> build/bdist.linux-armv7l/wheel/mgatk/bin/python
2020-07-03T03:58:52,472   copying build/lib/mgatk/bin/python/find_barcodes.py -> build/bdist.linux-armv7l/wheel/mgatk/bin/python
2020-07-03T03:58:52,477   copying build/lib/mgatk/bin/python/sumstatsBPtenx.py -> build/bdist.linux-armv7l/wheel/mgatk/bin/python
2020-07-03T03:58:52,484   creating build/bdist.linux-armv7l/wheel/mgatk/bin/snake
2020-07-03T03:58:52,486   copying build/lib/mgatk/bin/snake/Snakefile.Scatter -> build/bdist.linux-armv7l/wheel/mgatk/bin/snake
2020-07-03T03:58:52,492   copying build/lib/mgatk/bin/snake/Snakefile.tenx -> build/bdist.linux-armv7l/wheel/mgatk/bin/snake
2020-07-03T03:58:52,498   copying build/lib/mgatk/bin/snake/Snakefile.Gather -> build/bdist.linux-armv7l/wheel/mgatk/bin/snake
2020-07-03T03:58:52,504   copying build/lib/mgatk/cli.py -> build/bdist.linux-armv7l/wheel/mgatk
2020-07-03T03:58:52,511   copying build/lib/mgatk/__init__.py -> build/bdist.linux-armv7l/wheel/mgatk
2020-07-03T03:58:52,516   copying build/lib/mgatk/mgatkHelp.py -> build/bdist.linux-armv7l/wheel/mgatk
2020-07-03T03:58:52,525   creating build/bdist.linux-armv7l/wheel/mgatk/del
2020-07-03T03:58:52,528   creating build/bdist.linux-armv7l/wheel/mgatk/del/__pycache__
2020-07-03T03:58:52,531   copying build/lib/mgatk/del/__pycache__/clifind.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/mgatk/del/__pycache__
2020-07-03T03:58:52,537   copying build/lib/mgatk/del/__pycache__/clidel.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/mgatk/del/__pycache__
2020-07-03T03:58:52,543   copying build/lib/mgatk/del/.DS_Store -> build/bdist.linux-armv7l/wheel/mgatk/del
2020-07-03T03:58:52,550   copying build/lib/mgatk/del/clifind.py -> build/bdist.linux-armv7l/wheel/mgatk/del
2020-07-03T03:58:52,555   copying build/lib/mgatk/del/clidel.py -> build/bdist.linux-armv7l/wheel/mgatk/del
2020-07-03T03:58:52,563   creating build/bdist.linux-armv7l/wheel/mgatk/del/singles_del
2020-07-03T03:58:52,566   copying build/lib/mgatk/del/singles_del/Snakefile.delSingles -> build/bdist.linux-armv7l/wheel/mgatk/del/singles_del
2020-07-03T03:58:52,572   copying build/lib/mgatk/del/singles_del/02_heteroplasmy_del_singles.R -> build/bdist.linux-armv7l/wheel/mgatk/del/singles_del
2020-07-03T03:58:52,577   copying build/lib/mgatk/del/singles_del/01_process_cell_reads.py -> build/bdist.linux-armv7l/wheel/mgatk/del/singles_del
2020-07-03T03:58:52,584   creating build/bdist.linux-armv7l/wheel/mgatk/del/bulk_del
2020-07-03T03:58:52,587   copying build/lib/mgatk/del/bulk_del/plot_deletion_breaks_bulk.R -> build/bdist.linux-armv7l/wheel/mgatk/del/bulk_del
2020-07-03T03:58:52,592   running install_egg_info
2020-07-03T03:58:52,612   Copying mgatk.egg-info to build/bdist.linux-armv7l/wheel/mgatk-0.5.6-py3.5.egg-info
2020-07-03T03:58:52,648   running install_scripts
2020-07-03T03:58:52,860   creating build/bdist.linux-armv7l/wheel/mgatk-0.5.6.dist-info/WHEEL
2020-07-03T03:58:57,692   Building wheel for mgatk (setup.py): finished with status 'done'
2020-07-03T03:58:57,925   Created wheel for mgatk: filename=mgatk-0.5.6-py2.py3-none-any.whl size=14319642 sha256=a199b8ec80e8f6581d33504f49229ef908c215936379d77f622394cf1ab2b558
2020-07-03T03:58:57,925   Stored in directory: /tmp/pip-ephem-wheel-cache-rr7_wayq/wheels/cf/ca/bc/a9149733a1b94f59fea589c2bd079cdbfd58cc6f736b77e7e1
2020-07-03T03:58:57,929 Successfully built mgatk
2020-07-03T03:59:00,411 Removed build tracker: '/tmp/pip-req-tracker-p776ou3l'