2020-07-04T11:40:24,386 Created temporary directory: /tmp/pip-ephem-wheel-cache-3bzfkxde
2020-07-04T11:40:24,390 Created temporary directory: /tmp/pip-req-tracker-r9f6ufqr
2020-07-04T11:40:24,391 Initialized build tracking at /tmp/pip-req-tracker-r9f6ufqr
2020-07-04T11:40:24,393 Created build tracker: /tmp/pip-req-tracker-r9f6ufqr
2020-07-04T11:40:24,393 Entered build tracker: /tmp/pip-req-tracker-r9f6ufqr
2020-07-04T11:40:24,395 Created temporary directory: /tmp/pip-wheel-w27tbbf3
2020-07-04T11:40:24,415 1 location(s) to search for versions of scipion-em-relion:
2020-07-04T11:40:24,415 * https://pypi.org/simple/scipion-em-relion/
2020-07-04T11:40:24,415 Fetching project page and analyzing links: https://pypi.org/simple/scipion-em-relion/
2020-07-04T11:40:24,417 Getting page https://pypi.org/simple/scipion-em-relion/
2020-07-04T11:40:24,422 Found index url https://pypi.org/simple
2020-07-04T11:40:24,750   Found link https://files.pythonhosted.org/packages/05/a2/d5f1ffa8537f36f40b34263047919ae34baccbe64147bc68cc6c3f8777d9/scipion-em-relion-1.0.0.tar.gz#sha256=b12f8f634114a7e3cb0b33d7f6204bc47b8b5bb3815d3855feedbada752368fb (from https://pypi.org/simple/scipion-em-relion/), version: 1.0.0
2020-07-04T11:40:24,751   Found link https://files.pythonhosted.org/packages/48/4b/02aa5c517d8e6db7aa85d26b76f016841c9e34d58e21e04fa23423a9ef06/scipion-em-relion-1.0.1.tar.gz#sha256=6d7d065852276760640e5c6cb90a35fa93e7096556cdd591d015085c4b3a2792 (from https://pypi.org/simple/scipion-em-relion/), version: 1.0.1
2020-07-04T11:40:24,752   Found link https://files.pythonhosted.org/packages/55/7b/90403e2f937a52301e27955b49665b462df0c4ab02da6444c01f3543ae42/scipion-em-relion-1.0.2.tar.gz#sha256=e53dc640184f6e78f8449bd9bf03524820495b8e2eaf219cc558a87da89dbf22 (from https://pypi.org/simple/scipion-em-relion/), version: 1.0.2
2020-07-04T11:40:24,753   Found link https://files.pythonhosted.org/packages/57/e2/3c6741b62688a1b20b159f7efa0139a9573eb17d72d745b3023f2e8a51fd/scipion-em-relion-1.0.3.tar.gz#sha256=5084bfc2edf75de02f0577fe57e3f63de3e20fff862a40525971c5c3682d072a (from https://pypi.org/simple/scipion-em-relion/), version: 1.0.3
2020-07-04T11:40:24,754   Found link https://files.pythonhosted.org/packages/dd/92/ea6e7092b04a7b25c526d2c0e4243183e4146b3cbd85a6950875083a3abb/scipion-em-relion-1.0.4.tar.gz#sha256=d7adc3cc5c1f4f631cd298cea58e8c3ec035902362ba1f875059f2f9b4b58c1b (from https://pypi.org/simple/scipion-em-relion/), version: 1.0.4
2020-07-04T11:40:24,755   Found link https://files.pythonhosted.org/packages/fb/c0/9945e6d60f050b3493b46e980c1feaab668dee0cd15ba2b5030c2875bbf0/scipion-em-relion-1.0.5.tar.gz#sha256=2eeaed3eef32e0a16656bd36e4648aa68d6f3b45e8caa9e9a7af36e3a72b6449 (from https://pypi.org/simple/scipion-em-relion/), version: 1.0.5
2020-07-04T11:40:24,755   Found link https://files.pythonhosted.org/packages/86/87/bfc3ea75b9f88d116bc644ef38d709bc3a1e8cde59fc7af1cd944596713b/scipion-em-relion-1.0.6.tar.gz#sha256=326a1814aa725f2ce3bb40d7cc535d3057f17eac6a8e36232483070d2ac19d26 (from https://pypi.org/simple/scipion-em-relion/), version: 1.0.6
2020-07-04T11:40:24,756   Found link https://files.pythonhosted.org/packages/70/c1/24483e734ce2077d9fb9b1bb370ddf6ec2430e962fc1349e7ab1ac736137/scipion-em-relion-1.0.7.tar.gz#sha256=06becee63db18acc16ae2d22bac5f5c55e495922246f5aea10ffe4f47d40d9f7 (from https://pypi.org/simple/scipion-em-relion/), version: 1.0.7
2020-07-04T11:40:24,757   Found link https://files.pythonhosted.org/packages/1f/82/9f8eb2869092529d10d9d3fbdf685a232eb70971678ee502858c7c4c7e64/scipion-em-relion-1.0.8.tar.gz#sha256=88105eba3688fb98a76d3e9e5343f4688ee191a6e45343b24344e2b9ddb1b754 (from https://pypi.org/simple/scipion-em-relion/), version: 1.0.8
2020-07-04T11:40:24,758   Found link https://files.pythonhosted.org/packages/f2/3f/211e14befe51bb9447e4d024f3e01c48e96049dd00e6ca402e0b2c1e2ac6/scipion-em-relion-1.0.9.tar.gz#sha256=4fc9a904a99fbd81617b29fd9e5f6e15b67c0da5a1ed5519c548985fb0954af4 (from https://pypi.org/simple/scipion-em-relion/), version: 1.0.9
2020-07-04T11:40:24,759   Found link https://files.pythonhosted.org/packages/52/35/ffacafc5bfeeaa67e4f41bb7cff72d0a62924866ebfd565d44ec97f57b7e/scipion-em-relion-3.0.0a1.tar.gz#sha256=ceefcb9d9fe9dec42a2838ae004efc858f589aa0df5c2fd3dd561754a07d9969 (from https://pypi.org/simple/scipion-em-relion/), version: 3.0.0a1
2020-07-04T11:40:24,760   Found link https://files.pythonhosted.org/packages/64/b6/c4d9a3c1c2aa67344f07b6228f53e9e0ebab0fe70fc7516f55eaa0460d68/scipion-em-relion-3.0.0a3.tar.gz#sha256=8accb26c90bfd2965210da73a519217124a0e43bf97e046aca0431f9545e81f4 (from https://pypi.org/simple/scipion-em-relion/), version: 3.0.0a3
2020-07-04T11:40:24,761   Found link https://files.pythonhosted.org/packages/13/d4/100456e9fa33dc38a0b1b5227e351f37c088e576cb3ea18107fb046b2615/scipion-em-relion-3.0.0a4.tar.gz#sha256=6c3166a3000da47d9a72149e9bb67a8e702ae5e03a98b161b3eb104bcffec701 (from https://pypi.org/simple/scipion-em-relion/), version: 3.0.0a4
2020-07-04T11:40:24,762   Found link https://files.pythonhosted.org/packages/19/64/82b66e24e5915acf91cc9d42addb90fd8d6248afaf1c5726e086db0a9700/scipion-em-relion-3.0.0a5.tar.gz#sha256=3505e13ec6415d74268a84fd5140d996bc02970682ad3f3d5dab8ee355ac93c5 (from https://pypi.org/simple/scipion-em-relion/), version: 3.0.0a5
2020-07-04T11:40:24,777 Given no hashes to check 1 links for project 'scipion-em-relion': discarding no candidates
2020-07-04T11:40:24,779 Using version 3.0.0a5 (newest of versions: 3.0.0a5)
2020-07-04T11:40:24,786 Collecting scipion-em-relion==3.0.0a5
2020-07-04T11:40:24,790   Created temporary directory: /tmp/pip-unpack-ma4y_yzp
2020-07-04T11:40:25,067   Downloading scipion-em-relion-3.0.0a5.tar.gz (194 kB)
2020-07-04T11:40:25,648   Added scipion-em-relion==3.0.0a5 from https://files.pythonhosted.org/packages/19/64/82b66e24e5915acf91cc9d42addb90fd8d6248afaf1c5726e086db0a9700/scipion-em-relion-3.0.0a5.tar.gz#sha256=3505e13ec6415d74268a84fd5140d996bc02970682ad3f3d5dab8ee355ac93c5 to build tracker '/tmp/pip-req-tracker-r9f6ufqr'
2020-07-04T11:40:25,650     Running setup.py (path:/tmp/pip-wheel-w27tbbf3/scipion-em-relion/setup.py) egg_info for package scipion-em-relion
2020-07-04T11:40:25,652     Created temporary directory: /tmp/pip-pip-egg-info-d_7xdr5h
2020-07-04T11:40:25,652     Running command python setup.py egg_info
2020-07-04T11:40:27,698     running egg_info
2020-07-04T11:40:27,704     creating /tmp/pip-pip-egg-info-d_7xdr5h/scipion_em_relion.egg-info
2020-07-04T11:40:27,708     writing top-level names to /tmp/pip-pip-egg-info-d_7xdr5h/scipion_em_relion.egg-info/top_level.txt
2020-07-04T11:40:27,710     writing dependency_links to /tmp/pip-pip-egg-info-d_7xdr5h/scipion_em_relion.egg-info/dependency_links.txt
2020-07-04T11:40:27,712     writing /tmp/pip-pip-egg-info-d_7xdr5h/scipion_em_relion.egg-info/PKG-INFO
2020-07-04T11:40:27,717     writing entry points to /tmp/pip-pip-egg-info-d_7xdr5h/scipion_em_relion.egg-info/entry_points.txt
2020-07-04T11:40:27,719     writing requirements to /tmp/pip-pip-egg-info-d_7xdr5h/scipion_em_relion.egg-info/requires.txt
2020-07-04T11:40:27,725     writing manifest file '/tmp/pip-pip-egg-info-d_7xdr5h/scipion_em_relion.egg-info/SOURCES.txt'
2020-07-04T11:40:28,103     reading manifest file '/tmp/pip-pip-egg-info-d_7xdr5h/scipion_em_relion.egg-info/SOURCES.txt'
2020-07-04T11:40:28,106     reading manifest template 'MANIFEST.in'
2020-07-04T11:40:28,122     writing manifest file '/tmp/pip-pip-egg-info-d_7xdr5h/scipion_em_relion.egg-info/SOURCES.txt'
2020-07-04T11:40:28,260   Source in /tmp/pip-wheel-w27tbbf3/scipion-em-relion has version 3.0.0a5, which satisfies requirement scipion-em-relion==3.0.0a5 from https://files.pythonhosted.org/packages/19/64/82b66e24e5915acf91cc9d42addb90fd8d6248afaf1c5726e086db0a9700/scipion-em-relion-3.0.0a5.tar.gz#sha256=3505e13ec6415d74268a84fd5140d996bc02970682ad3f3d5dab8ee355ac93c5
2020-07-04T11:40:28,261   Removed scipion-em-relion==3.0.0a5 from https://files.pythonhosted.org/packages/19/64/82b66e24e5915acf91cc9d42addb90fd8d6248afaf1c5726e086db0a9700/scipion-em-relion-3.0.0a5.tar.gz#sha256=3505e13ec6415d74268a84fd5140d996bc02970682ad3f3d5dab8ee355ac93c5 from build tracker '/tmp/pip-req-tracker-r9f6ufqr'
2020-07-04T11:40:28,267 Building wheels for collected packages: scipion-em-relion
2020-07-04T11:40:28,276   Created temporary directory: /tmp/pip-wheel-hix_o194
2020-07-04T11:40:28,277   Building wheel for scipion-em-relion (setup.py): started
2020-07-04T11:40:28,278   Destination directory: /tmp/pip-wheel-hix_o194
2020-07-04T11:40:28,278   Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-w27tbbf3/scipion-em-relion/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-w27tbbf3/scipion-em-relion/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-hix_o194
2020-07-04T11:40:30,328   running bdist_wheel
2020-07-04T11:40:30,343   running build
2020-07-04T11:40:30,344   running build_py
2020-07-04T11:40:30,684   creating build
2020-07-04T11:40:30,685   creating build/lib
2020-07-04T11:40:30,686   creating build/lib/relion
2020-07-04T11:40:30,689   copying relion/bibtex.py -> build/lib/relion
2020-07-04T11:40:30,695   copying relion/objects.py -> build/lib/relion
2020-07-04T11:40:30,699   copying relion/__init__.py -> build/lib/relion
2020-07-04T11:40:30,704   copying relion/wizards.py -> build/lib/relion
2020-07-04T11:40:30,710   copying relion/constants.py -> build/lib/relion
2020-07-04T11:40:30,719   creating build/lib/relion/convert
2020-07-04T11:40:30,721   copying relion/convert/convert30.py -> build/lib/relion/convert
2020-07-04T11:40:30,729   copying relion/convert/convert_utils.py -> build/lib/relion/convert
2020-07-04T11:40:30,735   copying relion/convert/convert_deprecated.py -> build/lib/relion/convert
2020-07-04T11:40:30,743   copying relion/convert/__init__.py -> build/lib/relion/convert
2020-07-04T11:40:30,748   copying relion/convert/convert_base.py -> build/lib/relion/convert
2020-07-04T11:40:30,753   copying relion/convert/convert31.py -> build/lib/relion/convert
2020-07-04T11:40:30,762   copying relion/convert/dataimport.py -> build/lib/relion/convert
2020-07-04T11:40:30,777   creating build/lib/relion/protocols
2020-07-04T11:40:30,780   copying relion/protocols/protocol_autopick.py -> build/lib/relion/protocols
2020-07-04T11:40:30,786   copying relion/protocols/protocol_initialmodel.py -> build/lib/relion/protocols
2020-07-04T11:40:30,792   copying relion/protocols/protocol_multibody.py -> build/lib/relion/protocols
2020-07-04T11:40:30,799   copying relion/protocols/protocol_motioncor.py -> build/lib/relion/protocols
2020-07-04T11:40:30,808   copying relion/protocols/protocol_extract_particles.py -> build/lib/relion/protocols
2020-07-04T11:40:30,816   copying relion/protocols/protocol_export_ctf.py -> build/lib/relion/protocols
2020-07-04T11:40:30,823   copying relion/protocols/protocol_refine3d.py -> build/lib/relion/protocols
2020-07-04T11:40:30,830   copying relion/protocols/protocol_center_averages.py -> build/lib/relion/protocols
2020-07-04T11:40:30,836   copying relion/protocols/protocol_compress_movies.py -> build/lib/relion/protocols
2020-07-04T11:40:30,843   copying relion/protocols/protocol_export_particles.py -> build/lib/relion/protocols
2020-07-04T11:40:30,850   copying relion/protocols/protocol_reconstruct.py -> build/lib/relion/protocols
2020-07-04T11:40:30,856   copying relion/protocols/protocol_sort.py -> build/lib/relion/protocols
2020-07-04T11:40:30,864   copying relion/protocols/protocol_classify2d.py -> build/lib/relion/protocols
2020-07-04T11:40:30,871   copying relion/protocols/protocol_postprocess.py -> build/lib/relion/protocols
2020-07-04T11:40:30,879   copying relion/protocols/protocol_autopick_log.py -> build/lib/relion/protocols
2020-07-04T11:40:30,886   copying relion/protocols/protocol_ctf_refinement.py -> build/lib/relion/protocols
2020-07-04T11:40:30,894   copying relion/protocols/protocol_base.py -> build/lib/relion/protocols
2020-07-04T11:40:30,907   copying relion/protocols/protocol_bayesian_polishing.py -> build/lib/relion/protocols
2020-07-04T11:40:30,915   copying relion/protocols/protocol_export_coords.py -> build/lib/relion/protocols
2020-07-04T11:40:30,921   copying relion/protocols/protocol_classify3d.py -> build/lib/relion/protocols
2020-07-04T11:40:30,928   copying relion/protocols/protocol_assign_optic_groups.py -> build/lib/relion/protocols
2020-07-04T11:40:30,935   copying relion/protocols/protocol_subtract.py -> build/lib/relion/protocols
2020-07-04T11:40:30,943   copying relion/protocols/protocol_expand_symmetry.py -> build/lib/relion/protocols
2020-07-04T11:40:30,949   copying relion/protocols/protocol_create_mask3d.py -> build/lib/relion/protocols
2020-07-04T11:40:30,956   copying relion/protocols/protocol_localres.py -> build/lib/relion/protocols
2020-07-04T11:40:30,963   copying relion/protocols/__init__.py -> build/lib/relion/protocols
2020-07-04T11:40:30,969   copying relion/protocols/protocol_preprocess.py -> build/lib/relion/protocols
2020-07-04T11:40:30,977   copying relion/protocols/protocol_remove_views.py -> build/lib/relion/protocols
2020-07-04T11:40:30,984   copying relion/protocols/protocol_symmetrize_volume.py -> build/lib/relion/protocols
2020-07-04T11:40:30,990   copying relion/protocols/protocol_autopick_ref.py -> build/lib/relion/protocols
2020-07-04T11:40:30,999   copying relion/protocols/protocol_compress_estimate_gain.py -> build/lib/relion/protocols
2020-07-04T11:40:31,008   creating build/lib/relion/tests
2020-07-04T11:40:31,011   copying relion/tests/test_workflow_relion3.py -> build/lib/relion/tests
2020-07-04T11:40:31,018   copying relion/tests/test_protocols_relion.py -> build/lib/relion/tests
2020-07-04T11:40:31,029   copying relion/tests/__init__.py -> build/lib/relion/tests
2020-07-04T11:40:31,033   copying relion/tests/test_convert_relion.py -> build/lib/relion/tests
2020-07-04T11:40:31,041   copying relion/tests/test_protocols_relion3.py -> build/lib/relion/tests
2020-07-04T11:40:31,052   creating build/lib/relion/viewers
2020-07-04T11:40:31,055   copying relion/viewers/viewer_base.py -> build/lib/relion/viewers
2020-07-04T11:40:31,065   copying relion/viewers/viewer_polishing.py -> build/lib/relion/viewers
2020-07-04T11:40:31,072   copying relion/viewers/viewer_motioncor.py -> build/lib/relion/viewers
2020-07-04T11:40:31,079   copying relion/viewers/viewer_sort.py -> build/lib/relion/viewers
2020-07-04T11:40:31,085   copying relion/viewers/viewer_locres.py -> build/lib/relion/viewers
2020-07-04T11:40:31,092   copying relion/viewers/viewer_ctfrefine.py -> build/lib/relion/viewers
2020-07-04T11:40:31,098   copying relion/viewers/__init__.py -> build/lib/relion/viewers
2020-07-04T11:40:31,104   copying relion/viewers/viewer_postprocess.py -> build/lib/relion/viewers
2020-07-04T11:40:31,122   copying relion/relion_logo.png -> build/lib/relion
2020-07-04T11:40:31,128   copying relion/protocols.conf -> build/lib/relion
2020-07-04T11:40:31,133   creating build/lib/relion/convert/mtfs
2020-07-04T11:40:31,135   copying relion/convert/mtfs/mtf_k2_300_ec.star -> build/lib/relion/convert/mtfs
2020-07-04T11:40:31,142   copying relion/convert/mtfs/mtf_f3_200_ec.star -> build/lib/relion/convert/mtfs
2020-07-04T11:40:31,148   copying relion/convert/mtfs/mtf_de20_300.star -> build/lib/relion/convert/mtfs
2020-07-04T11:40:31,156   copying relion/convert/mtfs/mtf_f3_300_ec.star -> build/lib/relion/convert/mtfs
2020-07-04T11:40:31,162   copying relion/convert/mtfs/mtf_f2_300.star -> build/lib/relion/convert/mtfs
2020-07-04T11:40:31,193   installing to build/bdist.linux-armv7l/wheel
2020-07-04T11:40:31,194   running install
2020-07-04T11:40:31,196   running install_lib
2020-07-04T11:40:31,204   creating build/bdist.linux-armv7l
2020-07-04T11:40:31,205   creating build/bdist.linux-armv7l/wheel
2020-07-04T11:40:31,209   creating build/bdist.linux-armv7l/wheel/relion
2020-07-04T11:40:31,212   creating build/bdist.linux-armv7l/wheel/relion/convert
2020-07-04T11:40:31,214   copying build/lib/relion/convert/convert30.py -> build/bdist.linux-armv7l/wheel/relion/convert
2020-07-04T11:40:31,220   copying build/lib/relion/convert/convert_utils.py -> build/bdist.linux-armv7l/wheel/relion/convert
2020-07-04T11:40:31,228   creating build/bdist.linux-armv7l/wheel/relion/convert/mtfs
2020-07-04T11:40:31,230   copying build/lib/relion/convert/mtfs/mtf_k2_300_ec.star -> build/bdist.linux-armv7l/wheel/relion/convert/mtfs
2020-07-04T11:40:31,238   copying build/lib/relion/convert/mtfs/mtf_f3_200_ec.star -> build/bdist.linux-armv7l/wheel/relion/convert/mtfs
2020-07-04T11:40:31,244   copying build/lib/relion/convert/mtfs/mtf_de20_300.star -> build/bdist.linux-armv7l/wheel/relion/convert/mtfs
2020-07-04T11:40:31,251   copying build/lib/relion/convert/mtfs/mtf_f3_300_ec.star -> build/bdist.linux-armv7l/wheel/relion/convert/mtfs
2020-07-04T11:40:31,256   copying build/lib/relion/convert/mtfs/mtf_f2_300.star -> build/bdist.linux-armv7l/wheel/relion/convert/mtfs
2020-07-04T11:40:31,264   copying build/lib/relion/convert/convert_deprecated.py -> build/bdist.linux-armv7l/wheel/relion/convert
2020-07-04T11:40:31,272   copying build/lib/relion/convert/__init__.py -> build/bdist.linux-armv7l/wheel/relion/convert
2020-07-04T11:40:31,279   copying build/lib/relion/convert/convert_base.py -> build/bdist.linux-armv7l/wheel/relion/convert
2020-07-04T11:40:31,285   copying build/lib/relion/convert/convert31.py -> build/bdist.linux-armv7l/wheel/relion/convert
2020-07-04T11:40:31,292   copying build/lib/relion/convert/dataimport.py -> build/bdist.linux-armv7l/wheel/relion/convert
2020-07-04T11:40:31,297   copying build/lib/relion/bibtex.py -> build/bdist.linux-armv7l/wheel/relion
2020-07-04T11:40:31,302   copying build/lib/relion/objects.py -> build/bdist.linux-armv7l/wheel/relion
2020-07-04T11:40:31,307   copying build/lib/relion/relion_logo.png -> build/bdist.linux-armv7l/wheel/relion
2020-07-04T11:40:31,313   copying build/lib/relion/__init__.py -> build/bdist.linux-armv7l/wheel/relion
2020-07-04T11:40:31,322   creating build/bdist.linux-armv7l/wheel/relion/protocols
2020-07-04T11:40:31,324   copying build/lib/relion/protocols/protocol_autopick.py -> build/bdist.linux-armv7l/wheel/relion/protocols
2020-07-04T11:40:31,331   copying build/lib/relion/protocols/protocol_initialmodel.py -> build/bdist.linux-armv7l/wheel/relion/protocols
2020-07-04T11:40:31,339   copying build/lib/relion/protocols/protocol_multibody.py -> build/bdist.linux-armv7l/wheel/relion/protocols
2020-07-04T11:40:31,346   copying build/lib/relion/protocols/protocol_motioncor.py -> build/bdist.linux-armv7l/wheel/relion/protocols
2020-07-04T11:40:31,354   copying build/lib/relion/protocols/protocol_extract_particles.py -> build/bdist.linux-armv7l/wheel/relion/protocols
2020-07-04T11:40:31,362   copying build/lib/relion/protocols/protocol_export_ctf.py -> build/bdist.linux-armv7l/wheel/relion/protocols
2020-07-04T11:40:31,368   copying build/lib/relion/protocols/protocol_refine3d.py -> build/bdist.linux-armv7l/wheel/relion/protocols
2020-07-04T11:40:31,375   copying build/lib/relion/protocols/protocol_center_averages.py -> build/bdist.linux-armv7l/wheel/relion/protocols
2020-07-04T11:40:31,381   copying build/lib/relion/protocols/protocol_compress_movies.py -> build/bdist.linux-armv7l/wheel/relion/protocols
2020-07-04T11:40:31,387   copying build/lib/relion/protocols/protocol_export_particles.py -> build/bdist.linux-armv7l/wheel/relion/protocols
2020-07-04T11:40:31,393   copying build/lib/relion/protocols/protocol_reconstruct.py -> build/bdist.linux-armv7l/wheel/relion/protocols
2020-07-04T11:40:31,398   copying build/lib/relion/protocols/protocol_sort.py -> build/bdist.linux-armv7l/wheel/relion/protocols
2020-07-04T11:40:31,404   copying build/lib/relion/protocols/protocol_classify2d.py -> build/bdist.linux-armv7l/wheel/relion/protocols
2020-07-04T11:40:31,409   copying build/lib/relion/protocols/protocol_postprocess.py -> build/bdist.linux-armv7l/wheel/relion/protocols
2020-07-04T11:40:31,416   copying build/lib/relion/protocols/protocol_autopick_log.py -> build/bdist.linux-armv7l/wheel/relion/protocols
2020-07-04T11:40:31,422   copying build/lib/relion/protocols/protocol_ctf_refinement.py -> build/bdist.linux-armv7l/wheel/relion/protocols
2020-07-04T11:40:31,429   copying build/lib/relion/protocols/protocol_base.py -> build/bdist.linux-armv7l/wheel/relion/protocols
2020-07-04T11:40:31,442   copying build/lib/relion/protocols/protocol_bayesian_polishing.py -> build/bdist.linux-armv7l/wheel/relion/protocols
2020-07-04T11:40:31,449   copying build/lib/relion/protocols/protocol_export_coords.py -> build/bdist.linux-armv7l/wheel/relion/protocols
2020-07-04T11:40:31,455   copying build/lib/relion/protocols/protocol_classify3d.py -> build/bdist.linux-armv7l/wheel/relion/protocols
2020-07-04T11:40:31,462   copying build/lib/relion/protocols/protocol_assign_optic_groups.py -> build/bdist.linux-armv7l/wheel/relion/protocols
2020-07-04T11:40:31,468   copying build/lib/relion/protocols/protocol_subtract.py -> build/bdist.linux-armv7l/wheel/relion/protocols
2020-07-04T11:40:31,474   copying build/lib/relion/protocols/protocol_expand_symmetry.py -> build/bdist.linux-armv7l/wheel/relion/protocols
2020-07-04T11:40:31,479   copying build/lib/relion/protocols/protocol_create_mask3d.py -> build/bdist.linux-armv7l/wheel/relion/protocols
2020-07-04T11:40:31,484   copying build/lib/relion/protocols/protocol_localres.py -> build/bdist.linux-armv7l/wheel/relion/protocols
2020-07-04T11:40:31,489   copying build/lib/relion/protocols/__init__.py -> build/bdist.linux-armv7l/wheel/relion/protocols
2020-07-04T11:40:31,495   copying build/lib/relion/protocols/protocol_preprocess.py -> build/bdist.linux-armv7l/wheel/relion/protocols
2020-07-04T11:40:31,502   copying build/lib/relion/protocols/protocol_remove_views.py -> build/bdist.linux-armv7l/wheel/relion/protocols
2020-07-04T11:40:31,509   copying build/lib/relion/protocols/protocol_symmetrize_volume.py -> build/bdist.linux-armv7l/wheel/relion/protocols
2020-07-04T11:40:31,514   copying build/lib/relion/protocols/protocol_autopick_ref.py -> build/bdist.linux-armv7l/wheel/relion/protocols
2020-07-04T11:40:31,524   copying build/lib/relion/protocols/protocol_compress_estimate_gain.py -> build/bdist.linux-armv7l/wheel/relion/protocols
2020-07-04T11:40:31,532   creating build/bdist.linux-armv7l/wheel/relion/tests
2020-07-04T11:40:31,534   copying build/lib/relion/tests/test_workflow_relion3.py -> build/bdist.linux-armv7l/wheel/relion/tests
2020-07-04T11:40:31,541   copying build/lib/relion/tests/test_protocols_relion.py -> build/bdist.linux-armv7l/wheel/relion/tests
2020-07-04T11:40:31,553   copying build/lib/relion/tests/__init__.py -> build/bdist.linux-armv7l/wheel/relion/tests
2020-07-04T11:40:31,557   copying build/lib/relion/tests/test_convert_relion.py -> build/bdist.linux-armv7l/wheel/relion/tests
2020-07-04T11:40:31,564   copying build/lib/relion/tests/test_protocols_relion3.py -> build/bdist.linux-armv7l/wheel/relion/tests
2020-07-04T11:40:31,570   copying build/lib/relion/wizards.py -> build/bdist.linux-armv7l/wheel/relion
2020-07-04T11:40:31,577   copying build/lib/relion/protocols.conf -> build/bdist.linux-armv7l/wheel/relion
2020-07-04T11:40:31,585   creating build/bdist.linux-armv7l/wheel/relion/viewers
2020-07-04T11:40:31,588   copying build/lib/relion/viewers/viewer_base.py -> build/bdist.linux-armv7l/wheel/relion/viewers
2020-07-04T11:40:31,598   copying build/lib/relion/viewers/viewer_polishing.py -> build/bdist.linux-armv7l/wheel/relion/viewers
2020-07-04T11:40:31,604   copying build/lib/relion/viewers/viewer_motioncor.py -> build/bdist.linux-armv7l/wheel/relion/viewers
2020-07-04T11:40:31,611   copying build/lib/relion/viewers/viewer_sort.py -> build/bdist.linux-armv7l/wheel/relion/viewers
2020-07-04T11:40:31,616   copying build/lib/relion/viewers/viewer_locres.py -> build/bdist.linux-armv7l/wheel/relion/viewers
2020-07-04T11:40:31,623   copying build/lib/relion/viewers/viewer_ctfrefine.py -> build/bdist.linux-armv7l/wheel/relion/viewers
2020-07-04T11:40:31,630   copying build/lib/relion/viewers/__init__.py -> build/bdist.linux-armv7l/wheel/relion/viewers
2020-07-04T11:40:31,636   copying build/lib/relion/viewers/viewer_postprocess.py -> build/bdist.linux-armv7l/wheel/relion/viewers
2020-07-04T11:40:31,642   copying build/lib/relion/constants.py -> build/bdist.linux-armv7l/wheel/relion
2020-07-04T11:40:31,648   running install_egg_info
2020-07-04T11:40:31,694   running egg_info
2020-07-04T11:40:31,695   writing entry points to scipion_em_relion.egg-info/entry_points.txt
2020-07-04T11:40:31,698   writing top-level names to scipion_em_relion.egg-info/top_level.txt
2020-07-04T11:40:31,701   writing scipion_em_relion.egg-info/PKG-INFO
2020-07-04T11:40:31,705   writing dependency_links to scipion_em_relion.egg-info/dependency_links.txt
2020-07-04T11:40:31,708   writing requirements to scipion_em_relion.egg-info/requires.txt
2020-07-04T11:40:31,738   reading manifest file 'scipion_em_relion.egg-info/SOURCES.txt'
2020-07-04T11:40:31,745   reading manifest template 'MANIFEST.in'
2020-07-04T11:40:31,764   writing manifest file 'scipion_em_relion.egg-info/SOURCES.txt'
2020-07-04T11:40:31,767   Copying scipion_em_relion.egg-info to build/bdist.linux-armv7l/wheel/scipion_em_relion-3.0.0a5-py3.5.egg-info
2020-07-04T11:40:31,800   running install_scripts
2020-07-04T11:40:31,992   creating build/bdist.linux-armv7l/wheel/scipion_em_relion-3.0.0a5.dist-info/WHEEL
2020-07-04T11:40:32,582   Building wheel for scipion-em-relion (setup.py): finished with status 'done'
2020-07-04T11:40:32,590   Created wheel for scipion-em-relion: filename=scipion_em_relion-3.0.0a5-py3-none-any.whl size=237590 sha256=1706a90ce5146dcb1b02020ec5aa4915c6d2f6f1b37afde5f356e550e4552589
2020-07-04T11:40:32,591   Stored in directory: /tmp/pip-ephem-wheel-cache-3bzfkxde/wheels/0d/f7/0d/dbe92ff7473febd710c62970d6673090d207965c169d10c7cd
2020-07-04T11:40:32,596 Successfully built scipion-em-relion
2020-07-04T11:40:32,647 Removed build tracker: '/tmp/pip-req-tracker-r9f6ufqr'