2020-07-06T05:54:26,606 Created temporary directory: /tmp/pip-ephem-wheel-cache-i1br9z_a 2020-07-06T05:54:26,610 Created temporary directory: /tmp/pip-req-tracker-rc28yqrx 2020-07-06T05:54:26,611 Initialized build tracking at /tmp/pip-req-tracker-rc28yqrx 2020-07-06T05:54:26,613 Created build tracker: /tmp/pip-req-tracker-rc28yqrx 2020-07-06T05:54:26,613 Entered build tracker: /tmp/pip-req-tracker-rc28yqrx 2020-07-06T05:54:26,615 Created temporary directory: /tmp/pip-wheel-p5rgetgj 2020-07-06T05:54:26,632 1 location(s) to search for versions of bpnet: 2020-07-06T05:54:26,632 * https://pypi.org/simple/bpnet/ 2020-07-06T05:54:26,633 Fetching project page and analyzing links: https://pypi.org/simple/bpnet/ 2020-07-06T05:54:26,635 Getting page https://pypi.org/simple/bpnet/ 2020-07-06T05:54:26,639 Found index url https://pypi.org/simple 2020-07-06T05:54:26,980 Found link https://files.pythonhosted.org/packages/ba/03/8adc2cff22e10c6e89ad545cf9d27f9e984ac5477b75ca9840003f4f185a/bpnet-0.0.1.tar.gz#sha256=a155a00c7cc99e45f40e83633b7ba5a3d35064cb9bab2c5bd3f2b658346333db (from https://pypi.org/simple/bpnet/), version: 0.0.1 2020-07-06T05:54:26,981 Found link https://files.pythonhosted.org/packages/f5/c6/d7abd1b4840ecb6128a0231deed1ff3f4fea58b508913f3ba7d2bfb31afe/bpnet-0.0.2.tar.gz#sha256=c19d525940aaa35d8f1128ee2bae840fc9b7adf19862164cd35fc14c0dde16cd (from https://pypi.org/simple/bpnet/), version: 0.0.2 2020-07-06T05:54:26,982 Found link https://files.pythonhosted.org/packages/d8/8f/d5e48991dd931828d7163067e39561935c88b7c6cb528ca7445bf1887848/bpnet-0.0.3.tar.gz#sha256=7e32018acca032773d5c5cc56e65e3ced241d00ab31b3eb6a8cb4c58718c7612 (from https://pypi.org/simple/bpnet/), version: 0.0.3 2020-07-06T05:54:26,983 Found link https://files.pythonhosted.org/packages/02/04/240d91c9ebde1232e723887c997761a3e00bfdaa457c5c3af21eaf952e8a/bpnet-0.0.4.tar.gz#sha256=2897c2e07140de8cbb5b2472caafda02968d55d61e9c60d17cd14cc54ce7efbf (from https://pypi.org/simple/bpnet/), version: 0.0.4 2020-07-06T05:54:26,984 Found link https://files.pythonhosted.org/packages/95/50/f6a4f5df5301f8b97bc4894d56ee753a053b0007a3950c2a7255da7c7462/bpnet-0.0.5.tar.gz#sha256=ba01ab9eb875d1d84bbdd7b7032620447d9e91dc0ed2d9dc68b7ceb915f0eb5f (from https://pypi.org/simple/bpnet/), version: 0.0.5 2020-07-06T05:54:26,985 Found link https://files.pythonhosted.org/packages/7d/79/4d521bdf41212588a28a23d75a5ca8ab1851a7bd094b75125e45259b3444/bpnet-0.0.6.tar.gz#sha256=2f610ddd09a288f48609bdf26acfa6434c2ae576bb000f56f2becf7c8f2a162f (from https://pypi.org/simple/bpnet/), version: 0.0.6 2020-07-06T05:54:26,986 Found link https://files.pythonhosted.org/packages/f8/8d/77c1880359c12905137cb33e2e108749368f746925cf5b0191968ce11f42/bpnet-0.0.7.tar.gz#sha256=145d80362f57e626fc6f7a49cf64f18fcbab4969efc0a506ae3c5d52ea9ccf56 (from https://pypi.org/simple/bpnet/), version: 0.0.7 2020-07-06T05:54:26,986 Found link https://files.pythonhosted.org/packages/46/ce/604ba9ac841d6f3fec1907ea91091a7b36805d6bdd9cfa43acc5fa161037/bpnet-0.0.8.tar.gz#sha256=155ce359b59ae5d781ee7f5e5ec0cb8eab561d47d7a6e4cba061b44166ea0371 (from https://pypi.org/simple/bpnet/), version: 0.0.8 2020-07-06T05:54:26,987 Found link https://files.pythonhosted.org/packages/45/8c/c6c3c549baa9f7168d36eb31f780373d6482f6140247c2ee24b0cd4723da/bpnet-0.0.9.tar.gz#sha256=a46dab31841aabeee05996aa801a492878b7ce6bacdcd807f6469b670b413057 (from https://pypi.org/simple/bpnet/), version: 0.0.9 2020-07-06T05:54:26,988 Found link https://files.pythonhosted.org/packages/1c/09/4d300f74a0ad594f1cbe3a63c8cea55e46cbd7730d4362e44eaba94e40a6/bpnet-0.0.10.tar.gz#sha256=a66510db862eeeb9620667192d90f10f42e0388545bc77b3f9b5ea3b561e4626 (from https://pypi.org/simple/bpnet/), version: 0.0.10 2020-07-06T05:54:26,989 Found link https://files.pythonhosted.org/packages/b7/d3/56f996500eb2808bdcf2ab5026d1e97fa33160643ed83292eb2c748d274a/bpnet-0.0.11.tar.gz#sha256=a5fb72e55dfec8e52439e3585f4d6a19102296f70d9f0e663c328d5fd75da901 (from https://pypi.org/simple/bpnet/), version: 0.0.11 2020-07-06T05:54:26,990 Found link https://files.pythonhosted.org/packages/38/16/4c0cfc7d99905436f1f90160620a214870d95cc1c150691243936db23986/bpnet-0.0.12.tar.gz#sha256=d64f9035d2ea6685ff3fe32dee1b7c7e5ae439df7c9aa00c117631014729bc3e (from https://pypi.org/simple/bpnet/), version: 0.0.12 2020-07-06T05:54:26,991 Found link https://files.pythonhosted.org/packages/f6/ca/cb3abb356c63f60ed2ce905dddefbfd9a4fde336be61319d5cd6c0304787/bpnet-0.0.13.tar.gz#sha256=3d4136edf0d27d90f0ed34f26b6f9c953c1c6a713d4cac8d30006f777955a682 (from https://pypi.org/simple/bpnet/), version: 0.0.13 2020-07-06T05:54:26,991 Found link https://files.pythonhosted.org/packages/c5/39/bf35f2a5636d47e026cd6048cd2a7c35c1af156124bf5695ca26ff2d0ef7/bpnet-0.0.14.tar.gz#sha256=1a15381890a2e3453ba0cae571e832f4e14e46654080770d259121e37d3bd35a (from https://pypi.org/simple/bpnet/), version: 0.0.14 2020-07-06T05:54:26,992 Found link https://files.pythonhosted.org/packages/81/dc/a1686d2293271afb975ec63ae575eba846a0e4c7337a4e8196b80de162d0/bpnet-0.0.15.tar.gz#sha256=e2a9872b5b6e8d27d3e7d73b7173acfd0467c2f7ba28136f3e330660fb04bc9d (from https://pypi.org/simple/bpnet/), version: 0.0.15 2020-07-06T05:54:26,993 Found link https://files.pythonhosted.org/packages/1b/b4/2e0b479186eed56589ed3664193452c12fd2cbb6b17c0740a68dbea9a0d2/bpnet-0.0.16.tar.gz#sha256=adac389aa180cb9ef437bec86c06d9e93a6ff8cc884f4fdc1f3e3fbdcf3899fe (from https://pypi.org/simple/bpnet/), version: 0.0.16 2020-07-06T05:54:26,994 Found link https://files.pythonhosted.org/packages/a2/81/32d1c0014100c893c8315bf4d2d30eaf1cc143a50f4ee5f0caac51c92cf6/bpnet-0.0.17.tar.gz#sha256=a9f53a17f278c7fce0bf62fac101aa3f4e2809a081f63002760f424068609f68 (from https://pypi.org/simple/bpnet/), version: 0.0.17 2020-07-06T05:54:26,995 Found link https://files.pythonhosted.org/packages/0f/14/ef7bc4e2639913afe83230a23577bb558ed8c990420849be042fabaebe9b/bpnet-0.0.18.tar.gz#sha256=06cda7f6564d667a0d6d4287e24135222f944e75db0562ad4d666f071d7a2908 (from https://pypi.org/simple/bpnet/), version: 0.0.18 2020-07-06T05:54:26,995 Found link https://files.pythonhosted.org/packages/99/d8/add0f43d98b1952922ffb47ee14174962997e76d768ab1922c3734d41a2c/bpnet-0.0.19.tar.gz#sha256=24bec03cab7e8bc071f5d71767f250bdc4efa7e376a72ad2e80135420928e355 (from https://pypi.org/simple/bpnet/), version: 0.0.19 2020-07-06T05:54:26,996 Found link https://files.pythonhosted.org/packages/b7/2d/4803c0bb3c0539085eb9e3841c8a53d2b19fba383bbf6375081842353bae/bpnet-0.0.20.tar.gz#sha256=1e94bc73c0c991f4fab0b26758935b1662af7423ae0fc24487fa77fc1c0c708c (from https://pypi.org/simple/bpnet/), version: 0.0.20 2020-07-06T05:54:26,997 Found link https://files.pythonhosted.org/packages/9b/fb/a6f86ecc39d45dbe6b8bab824d1d4e893cc28fec125485c066fa2eba6304/bpnet-0.0.21.tar.gz#sha256=63a3d2e6c7b16cd069de5a46bb12163f307ffcdcea2c82d49cf6df6daa26d48d (from https://pypi.org/simple/bpnet/), version: 0.0.21 2020-07-06T05:54:26,998 Skipping link: No binaries permitted for bpnet: https://files.pythonhosted.org/packages/40/d0/8c96ee34d8316ca850d0a6713a7e0bcf18efc827e1872735cb2c889393e3/bpnet-0.0.22-py3-none-any.whl#sha256=fa69eaa4283b9f4fa5fe8a005fa2bd72e6588cdcb6c2fab553c1ead5732f022b (from https://pypi.org/simple/bpnet/) 2020-07-06T05:54:26,999 Found link https://files.pythonhosted.org/packages/0b/e4/e7820ec990cba133cd807939d173871ccac21c9a7811897985ee54296bf0/bpnet-0.0.22.tar.gz#sha256=488f53266345e9344ca1e7e225a94b99e57ae2d2cdaad8c272fcc824c5d4a11a (from https://pypi.org/simple/bpnet/), version: 0.0.22 2020-07-06T05:54:26,999 Skipping link: No binaries permitted for bpnet: https://files.pythonhosted.org/packages/6d/0f/6d2a97d10ebe0c67c5cc887d5abef3b62409adb1355ae872357baba41765/bpnet-0.0.23-py3-none-any.whl#sha256=e7f24f87102d70268cff04bebf5a443bc3388f871aca53a01777d8938b8664c0 (from https://pypi.org/simple/bpnet/) 2020-07-06T05:54:27,000 Found link https://files.pythonhosted.org/packages/5b/3b/5a611fbd7aa3460b95c43ceb002a12803dfd0770faf5c078cc333d2fae85/bpnet-0.0.23.tar.gz#sha256=86962127b4c364a51d948d86fc96e41180359989d152e53d8ef222cc2655d2c7 (from https://pypi.org/simple/bpnet/), version: 0.0.23 2020-07-06T05:54:27,020 Given no hashes to check 1 links for project 'bpnet': discarding no candidates 2020-07-06T05:54:27,022 Using version 0.0.23 (newest of versions: 0.0.23) 2020-07-06T05:54:27,029 Collecting bpnet==0.0.23 2020-07-06T05:54:27,033 Created temporary directory: /tmp/pip-unpack-jwiwleou 2020-07-06T05:54:27,316 Downloading bpnet-0.0.23.tar.gz (3.7 MB) 2020-07-06T05:54:29,432 Added bpnet==0.0.23 from https://files.pythonhosted.org/packages/5b/3b/5a611fbd7aa3460b95c43ceb002a12803dfd0770faf5c078cc333d2fae85/bpnet-0.0.23.tar.gz#sha256=86962127b4c364a51d948d86fc96e41180359989d152e53d8ef222cc2655d2c7 to build tracker '/tmp/pip-req-tracker-rc28yqrx' 2020-07-06T05:54:29,435 Running setup.py (path:/tmp/pip-wheel-p5rgetgj/bpnet/setup.py) egg_info for package bpnet 2020-07-06T05:54:29,438 Created temporary directory: /tmp/pip-pip-egg-info-zgc8gbir 2020-07-06T05:54:29,439 Running command python setup.py egg_info 2020-07-06T05:54:31,852 running egg_info 2020-07-06T05:54:31,857 creating /tmp/pip-pip-egg-info-zgc8gbir/bpnet.egg-info 2020-07-06T05:54:31,859 writing /tmp/pip-pip-egg-info-zgc8gbir/bpnet.egg-info/PKG-INFO 2020-07-06T05:54:31,866 writing entry points to /tmp/pip-pip-egg-info-zgc8gbir/bpnet.egg-info/entry_points.txt 2020-07-06T05:54:31,870 writing requirements to /tmp/pip-pip-egg-info-zgc8gbir/bpnet.egg-info/requires.txt 2020-07-06T05:54:31,873 writing top-level names to /tmp/pip-pip-egg-info-zgc8gbir/bpnet.egg-info/top_level.txt 2020-07-06T05:54:31,875 writing dependency_links to /tmp/pip-pip-egg-info-zgc8gbir/bpnet.egg-info/dependency_links.txt 2020-07-06T05:54:31,882 writing manifest file '/tmp/pip-pip-egg-info-zgc8gbir/bpnet.egg-info/SOURCES.txt' 2020-07-06T05:54:32,248 reading manifest file '/tmp/pip-pip-egg-info-zgc8gbir/bpnet.egg-info/SOURCES.txt' 2020-07-06T05:54:32,251 reading manifest template 'MANIFEST.in' 2020-07-06T05:54:32,255 warning: no previously-included files matching '__pycache__' found under directory '*' 2020-07-06T05:54:32,257 warning: no previously-included files matching '*.py[co]' found under directory '*' 2020-07-06T05:54:32,280 warning: no files found matching '*.rst' under directory 'docs' 2020-07-06T05:54:32,288 warning: no files found matching 'conf.py' under directory 'docs' 2020-07-06T05:54:32,306 warning: no files found matching 'make.bat' under directory 'docs' 2020-07-06T05:54:32,320 warning: no files found matching '*.jpg' under directory 'docs' 2020-07-06T05:54:32,346 warning: no files found matching '*.gif' under directory 'docs' 2020-07-06T05:54:32,369 writing manifest file '/tmp/pip-pip-egg-info-zgc8gbir/bpnet.egg-info/SOURCES.txt' 2020-07-06T05:54:32,508 Source in /tmp/pip-wheel-p5rgetgj/bpnet has version 0.0.23, which satisfies requirement bpnet==0.0.23 from https://files.pythonhosted.org/packages/5b/3b/5a611fbd7aa3460b95c43ceb002a12803dfd0770faf5c078cc333d2fae85/bpnet-0.0.23.tar.gz#sha256=86962127b4c364a51d948d86fc96e41180359989d152e53d8ef222cc2655d2c7 2020-07-06T05:54:32,510 Removed bpnet==0.0.23 from https://files.pythonhosted.org/packages/5b/3b/5a611fbd7aa3460b95c43ceb002a12803dfd0770faf5c078cc333d2fae85/bpnet-0.0.23.tar.gz#sha256=86962127b4c364a51d948d86fc96e41180359989d152e53d8ef222cc2655d2c7 from build tracker '/tmp/pip-req-tracker-rc28yqrx' 2020-07-06T05:54:32,513 Building wheels for collected packages: bpnet 2020-07-06T05:54:32,523 Created temporary directory: /tmp/pip-wheel-8smoml_n 2020-07-06T05:54:32,524 Building wheel for bpnet (setup.py): started 2020-07-06T05:54:32,525 Destination directory: /tmp/pip-wheel-8smoml_n 2020-07-06T05:54:32,525 Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-p5rgetgj/bpnet/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-p5rgetgj/bpnet/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-8smoml_n 2020-07-06T05:54:35,032 running bdist_wheel 2020-07-06T05:54:35,048 running build 2020-07-06T05:54:35,049 running build_py 2020-07-06T05:54:35,407 creating build 2020-07-06T05:54:35,409 creating build/lib 2020-07-06T05:54:35,411 creating build/lib/bpnet 2020-07-06T05:54:35,415 copying bpnet/models.py -> build/lib/bpnet 2020-07-06T05:54:35,422 copying bpnet/samplers.py -> build/lib/bpnet 2020-07-06T05:54:35,427 copying bpnet/__main__.py -> build/lib/bpnet 2020-07-06T05:54:35,432 copying bpnet/simulate.py -> build/lib/bpnet 2020-07-06T05:54:35,439 copying bpnet/stats.py -> build/lib/bpnet 2020-07-06T05:54:35,445 copying bpnet/heads.py -> build/lib/bpnet 2020-07-06T05:54:35,452 copying bpnet/losses.py -> build/lib/bpnet 2020-07-06T05:54:35,457 copying bpnet/utils.py -> build/lib/bpnet 2020-07-06T05:54:35,464 copying bpnet/BPNet.py -> build/lib/bpnet 2020-07-06T05:54:35,471 copying bpnet/seqmodel.py -> build/lib/bpnet 2020-07-06T05:54:35,478 copying bpnet/extractors.py -> build/lib/bpnet 2020-07-06T05:54:35,484 copying bpnet/preproc.py -> build/lib/bpnet 2020-07-06T05:54:35,490 copying bpnet/layers.py -> build/lib/bpnet 2020-07-06T05:54:35,496 copying bpnet/__init__.py -> build/lib/bpnet 2020-07-06T05:54:35,502 copying bpnet/metrics.py -> build/lib/bpnet 2020-07-06T05:54:35,509 copying bpnet/configurables.py -> build/lib/bpnet 2020-07-06T05:54:35,514 copying bpnet/data.py -> build/lib/bpnet 2020-07-06T05:54:35,520 copying bpnet/dataspecs.py -> build/lib/bpnet 2020-07-06T05:54:35,526 copying bpnet/datasets.py -> build/lib/bpnet 2020-07-06T05:54:35,535 copying bpnet/functions.py -> build/lib/bpnet 2020-07-06T05:54:35,540 copying bpnet/trainers.py -> build/lib/bpnet 2020-07-06T05:54:35,546 copying bpnet/activations.py -> build/lib/bpnet 2020-07-06T05:54:35,553 creating build/lib/tests 2020-07-06T05:54:35,556 copying tests/test_train.py -> build/lib/tests 2020-07-06T05:54:35,561 copying tests/conftest.py -> build/lib/tests 2020-07-06T05:54:35,567 copying tests/test_seqmodel.py -> build/lib/tests 2020-07-06T05:54:35,572 copying tests/__init__.py -> build/lib/tests 2020-07-06T05:54:35,577 copying tests/configurables.py -> build/lib/tests 2020-07-06T05:54:35,582 copying tests/test_gin_parse.py -> build/lib/tests 2020-07-06T05:54:35,588 copying tests/test_contrib.py -> build/lib/tests 2020-07-06T05:54:35,594 creating build/lib/bpnet/modisco 2020-07-06T05:54:35,597 copying bpnet/modisco/utils.py -> build/lib/bpnet/modisco 2020-07-06T05:54:35,603 copying bpnet/modisco/periodicity.py -> build/lib/bpnet/modisco 2020-07-06T05:54:35,609 copying bpnet/modisco/motif_clustering.py -> build/lib/bpnet/modisco 2020-07-06T05:54:35,616 copying bpnet/modisco/files.py -> build/lib/bpnet/modisco 2020-07-06T05:54:35,624 copying bpnet/modisco/core.py -> build/lib/bpnet/modisco 2020-07-06T05:54:35,635 copying bpnet/modisco/profile.py -> build/lib/bpnet/modisco 2020-07-06T05:54:35,639 copying bpnet/modisco/__init__.py -> build/lib/bpnet/modisco 2020-07-06T05:54:35,645 copying bpnet/modisco/pattern_instances.py -> build/lib/bpnet/modisco 2020-07-06T05:54:35,652 copying bpnet/modisco/sliding_similarities.py -> build/lib/bpnet/modisco 2020-07-06T05:54:35,658 copying bpnet/modisco/table.py -> build/lib/bpnet/modisco 2020-07-06T05:54:35,666 creating build/lib/bpnet/plot 2020-07-06T05:54:35,669 copying bpnet/plot/tracks.py -> build/lib/bpnet/plot 2020-07-06T05:54:35,676 copying bpnet/plot/utils.py -> build/lib/bpnet/plot 2020-07-06T05:54:35,682 copying bpnet/plot/profiles.py -> build/lib/bpnet/plot 2020-07-06T05:54:35,689 copying bpnet/plot/vdom.py -> build/lib/bpnet/plot 2020-07-06T05:54:35,696 copying bpnet/plot/__init__.py -> build/lib/bpnet/plot 2020-07-06T05:54:35,700 copying bpnet/plot/evaluate.py -> build/lib/bpnet/plot 2020-07-06T05:54:35,705 copying bpnet/plot/heatmaps.py -> build/lib/bpnet/plot 2020-07-06T05:54:35,713 creating build/lib/bpnet/cli 2020-07-06T05:54:35,716 copying bpnet/cli/export_bw.py -> build/lib/bpnet/cli 2020-07-06T05:54:35,722 copying bpnet/cli/train.py -> build/lib/bpnet/cli 2020-07-06T05:54:35,730 copying bpnet/cli/modisco.py -> build/lib/bpnet/cli 2020-07-06T05:54:35,738 copying bpnet/cli/__init__.py -> build/lib/bpnet/cli 2020-07-06T05:54:35,743 copying bpnet/cli/contrib.py -> build/lib/bpnet/cli 2020-07-06T05:54:35,751 creating build/lib/bpnet/external 2020-07-06T05:54:35,754 copying bpnet/external/__init__.py -> build/lib/bpnet/external 2020-07-06T05:54:35,759 creating build/lib/bpnet/external/deeplift 2020-07-06T05:54:35,762 copying bpnet/external/deeplift/dinuc_shuffle.py -> build/lib/bpnet/external/deeplift 2020-07-06T05:54:35,768 copying bpnet/external/deeplift/__init__.py -> build/lib/bpnet/external/deeplift 2020-07-06T05:54:35,773 creating build/lib/tests/modisco 2020-07-06T05:54:35,776 copying tests/modisco/test_core.py -> build/lib/tests/modisco 2020-07-06T05:54:35,782 copying tests/modisco/__init__.py -> build/lib/tests/modisco 2020-07-06T05:54:35,786 copying tests/modisco/test_modisco_file.py -> build/lib/tests/modisco 2020-07-06T05:54:35,791 copying tests/modisco/test_pattern_instances.py -> build/lib/tests/modisco 2020-07-06T05:54:35,797 creating build/lib/tests/plot 2020-07-06T05:54:35,800 copying tests/plot/__init__.py -> build/lib/tests/plot 2020-07-06T05:54:35,805 copying tests/plot/test_tracks.py -> build/lib/tests/plot 2020-07-06T05:54:35,811 creating build/lib/tests/cli 2020-07-06T05:54:35,814 copying tests/cli/test_train.py -> build/lib/tests/cli 2020-07-06T05:54:35,820 copying tests/cli/test_export_bw.py -> build/lib/tests/cli 2020-07-06T05:54:35,824 copying tests/cli/__init__.py -> build/lib/tests/cli 2020-07-06T05:54:35,829 copying tests/cli/test_contrib.py -> build/lib/tests/cli 2020-07-06T05:54:35,834 copying tests/cli/test_modisco.py -> build/lib/tests/cli 2020-07-06T05:54:35,839 running egg_info 2020-07-06T05:54:35,868 writing entry points to bpnet.egg-info/entry_points.txt 2020-07-06T05:54:35,871 writing dependency_links to bpnet.egg-info/dependency_links.txt 2020-07-06T05:54:35,875 writing top-level names to bpnet.egg-info/top_level.txt 2020-07-06T05:54:35,878 writing requirements to bpnet.egg-info/requires.txt 2020-07-06T05:54:35,882 writing bpnet.egg-info/PKG-INFO 2020-07-06T05:54:35,909 reading manifest file 'bpnet.egg-info/SOURCES.txt' 2020-07-06T05:54:35,922 reading manifest template 'MANIFEST.in' 2020-07-06T05:54:35,928 warning: no previously-included files matching '__pycache__' found under directory '*' 2020-07-06T05:54:35,933 warning: no previously-included files matching '*.py[co]' found under directory '*' 2020-07-06T05:54:35,957 warning: no files found matching '*.rst' under directory 'docs' 2020-07-06T05:54:35,963 warning: no files found matching 'conf.py' under directory 'docs' 2020-07-06T05:54:35,975 warning: no files found matching 'make.bat' under directory 'docs' 2020-07-06T05:54:35,986 warning: no files found matching '*.jpg' under directory 'docs' 2020-07-06T05:54:36,007 warning: no files found matching '*.gif' under directory 'docs' 2020-07-06T05:54:36,045 writing manifest file 'bpnet.egg-info/SOURCES.txt' 2020-07-06T05:54:36,055 copying bpnet/logging.conf -> build/lib/bpnet 2020-07-06T05:54:36,060 creating build/lib/bpnet/premade 2020-07-06T05:54:36,063 copying bpnet/premade/bpnet9-chipseq.gin -> build/lib/bpnet/premade 2020-07-06T05:54:36,069 copying bpnet/premade/bpnet9-ginspec.gin -> build/lib/bpnet/premade 2020-07-06T05:54:36,076 copying bpnet/premade/bpnet9-pyspec.gin -> build/lib/bpnet/premade 2020-07-06T05:54:36,082 copying bpnet/premade/bpnet9.gin -> build/lib/bpnet/premade 2020-07-06T05:54:36,088 copying bpnet/premade/modisco-50k.gin -> build/lib/bpnet/premade 2020-07-06T05:54:36,093 creating build/lib/bpnet/templates 2020-07-06T05:54:36,096 copying bpnet/templates/evaluate.ipynb -> build/lib/bpnet/templates 2020-07-06T05:54:36,111 copying bpnet/templates/modisco-chip.ipynb -> build/lib/bpnet/templates 2020-07-06T05:54:36,253 copying bpnet/templates/modisco.ipynb -> build/lib/bpnet/templates 2020-07-06T05:54:36,505 installing to build/bdist.linux-armv7l/wheel 2020-07-06T05:54:36,506 running install 2020-07-06T05:54:36,510 running install_lib 2020-07-06T05:54:36,518 creating build/bdist.linux-armv7l 2020-07-06T05:54:36,519 creating build/bdist.linux-armv7l/wheel 2020-07-06T05:54:36,525 creating build/bdist.linux-armv7l/wheel/bpnet 2020-07-06T05:54:36,528 copying build/lib/bpnet/models.py -> build/bdist.linux-armv7l/wheel/bpnet 2020-07-06T05:54:36,537 creating build/bdist.linux-armv7l/wheel/bpnet/modisco 2020-07-06T05:54:36,539 copying build/lib/bpnet/modisco/utils.py -> build/bdist.linux-armv7l/wheel/bpnet/modisco 2020-07-06T05:54:36,545 copying build/lib/bpnet/modisco/periodicity.py -> build/bdist.linux-armv7l/wheel/bpnet/modisco 2020-07-06T05:54:36,551 copying build/lib/bpnet/modisco/motif_clustering.py -> build/bdist.linux-armv7l/wheel/bpnet/modisco 2020-07-06T05:54:36,558 copying build/lib/bpnet/modisco/files.py -> build/bdist.linux-armv7l/wheel/bpnet/modisco 2020-07-06T05:54:36,566 copying build/lib/bpnet/modisco/core.py -> build/bdist.linux-armv7l/wheel/bpnet/modisco 2020-07-06T05:54:36,576 copying build/lib/bpnet/modisco/profile.py -> build/bdist.linux-armv7l/wheel/bpnet/modisco 2020-07-06T05:54:36,582 copying build/lib/bpnet/modisco/__init__.py -> build/bdist.linux-armv7l/wheel/bpnet/modisco 2020-07-06T05:54:36,587 copying build/lib/bpnet/modisco/pattern_instances.py -> build/bdist.linux-armv7l/wheel/bpnet/modisco 2020-07-06T05:54:36,594 copying build/lib/bpnet/modisco/sliding_similarities.py -> build/bdist.linux-armv7l/wheel/bpnet/modisco 2020-07-06T05:54:36,600 copying build/lib/bpnet/modisco/table.py -> build/bdist.linux-armv7l/wheel/bpnet/modisco 2020-07-06T05:54:36,607 copying build/lib/bpnet/samplers.py -> build/bdist.linux-armv7l/wheel/bpnet 2020-07-06T05:54:36,612 copying build/lib/bpnet/__main__.py -> build/bdist.linux-armv7l/wheel/bpnet 2020-07-06T05:54:36,617 copying build/lib/bpnet/simulate.py -> build/bdist.linux-armv7l/wheel/bpnet 2020-07-06T05:54:36,624 copying build/lib/bpnet/stats.py -> build/bdist.linux-armv7l/wheel/bpnet 2020-07-06T05:54:36,629 copying build/lib/bpnet/heads.py -> build/bdist.linux-armv7l/wheel/bpnet 2020-07-06T05:54:36,636 copying build/lib/bpnet/losses.py -> build/bdist.linux-armv7l/wheel/bpnet 2020-07-06T05:54:36,642 creating build/bdist.linux-armv7l/wheel/bpnet/templates 2020-07-06T05:54:36,644 copying build/lib/bpnet/templates/modisco-chip.ipynb -> build/bdist.linux-armv7l/wheel/bpnet/templates 2020-07-06T05:54:36,784 copying build/lib/bpnet/templates/modisco.ipynb -> build/bdist.linux-armv7l/wheel/bpnet/templates 2020-07-06T05:54:37,016 copying build/lib/bpnet/templates/evaluate.ipynb -> build/bdist.linux-armv7l/wheel/bpnet/templates 2020-07-06T05:54:37,031 creating build/bdist.linux-armv7l/wheel/bpnet/plot 2020-07-06T05:54:37,032 copying build/lib/bpnet/plot/tracks.py -> build/bdist.linux-armv7l/wheel/bpnet/plot 2020-07-06T05:54:37,038 copying build/lib/bpnet/plot/utils.py -> build/bdist.linux-armv7l/wheel/bpnet/plot 2020-07-06T05:54:37,044 copying build/lib/bpnet/plot/profiles.py -> build/bdist.linux-armv7l/wheel/bpnet/plot 2020-07-06T05:54:37,052 copying build/lib/bpnet/plot/vdom.py -> build/bdist.linux-armv7l/wheel/bpnet/plot 2020-07-06T05:54:37,059 copying build/lib/bpnet/plot/__init__.py -> build/bdist.linux-armv7l/wheel/bpnet/plot 2020-07-06T05:54:37,064 copying build/lib/bpnet/plot/evaluate.py -> build/bdist.linux-armv7l/wheel/bpnet/plot 2020-07-06T05:54:37,069 copying build/lib/bpnet/plot/heatmaps.py -> build/bdist.linux-armv7l/wheel/bpnet/plot 2020-07-06T05:54:37,076 copying build/lib/bpnet/utils.py -> build/bdist.linux-armv7l/wheel/bpnet 2020-07-06T05:54:37,084 creating build/bdist.linux-armv7l/wheel/bpnet/cli 2020-07-06T05:54:37,085 copying build/lib/bpnet/cli/export_bw.py -> build/bdist.linux-armv7l/wheel/bpnet/cli 2020-07-06T05:54:37,091 copying build/lib/bpnet/cli/train.py -> build/bdist.linux-armv7l/wheel/bpnet/cli 2020-07-06T05:54:37,098 copying build/lib/bpnet/cli/modisco.py -> build/bdist.linux-armv7l/wheel/bpnet/cli 2020-07-06T05:54:37,107 copying build/lib/bpnet/cli/__init__.py -> build/bdist.linux-armv7l/wheel/bpnet/cli 2020-07-06T05:54:37,112 copying build/lib/bpnet/cli/contrib.py -> build/bdist.linux-armv7l/wheel/bpnet/cli 2020-07-06T05:54:37,120 copying build/lib/bpnet/BPNet.py -> build/bdist.linux-armv7l/wheel/bpnet 2020-07-06T05:54:37,126 copying build/lib/bpnet/seqmodel.py -> build/bdist.linux-armv7l/wheel/bpnet 2020-07-06T05:54:37,131 copying build/lib/bpnet/extractors.py -> build/bdist.linux-armv7l/wheel/bpnet 2020-07-06T05:54:37,136 copying build/lib/bpnet/preproc.py -> build/bdist.linux-armv7l/wheel/bpnet 2020-07-06T05:54:37,143 creating build/bdist.linux-armv7l/wheel/bpnet/external 2020-07-06T05:54:37,148 creating build/bdist.linux-armv7l/wheel/bpnet/external/deeplift 2020-07-06T05:54:37,150 copying build/lib/bpnet/external/deeplift/dinuc_shuffle.py -> build/bdist.linux-armv7l/wheel/bpnet/external/deeplift 2020-07-06T05:54:37,156 copying build/lib/bpnet/external/deeplift/__init__.py -> build/bdist.linux-armv7l/wheel/bpnet/external/deeplift 2020-07-06T05:54:37,161 copying build/lib/bpnet/external/__init__.py -> build/bdist.linux-armv7l/wheel/bpnet/external 2020-07-06T05:54:37,164 copying build/lib/bpnet/layers.py -> build/bdist.linux-armv7l/wheel/bpnet 2020-07-06T05:54:37,170 copying build/lib/bpnet/__init__.py -> build/bdist.linux-armv7l/wheel/bpnet 2020-07-06T05:54:37,174 copying build/lib/bpnet/metrics.py -> build/bdist.linux-armv7l/wheel/bpnet 2020-07-06T05:54:37,180 copying build/lib/bpnet/configurables.py -> build/bdist.linux-armv7l/wheel/bpnet 2020-07-06T05:54:37,185 copying build/lib/bpnet/data.py -> build/bdist.linux-armv7l/wheel/bpnet 2020-07-06T05:54:37,192 copying build/lib/bpnet/dataspecs.py -> build/bdist.linux-armv7l/wheel/bpnet 2020-07-06T05:54:37,198 copying build/lib/bpnet/logging.conf -> build/bdist.linux-armv7l/wheel/bpnet 2020-07-06T05:54:37,204 copying build/lib/bpnet/datasets.py -> build/bdist.linux-armv7l/wheel/bpnet 2020-07-06T05:54:37,212 copying build/lib/bpnet/functions.py -> build/bdist.linux-armv7l/wheel/bpnet 2020-07-06T05:54:37,218 copying build/lib/bpnet/trainers.py -> build/bdist.linux-armv7l/wheel/bpnet 2020-07-06T05:54:37,225 creating build/bdist.linux-armv7l/wheel/bpnet/premade 2020-07-06T05:54:37,227 copying build/lib/bpnet/premade/modisco-50k.gin -> build/bdist.linux-armv7l/wheel/bpnet/premade 2020-07-06T05:54:37,232 copying build/lib/bpnet/premade/bpnet9.gin -> build/bdist.linux-armv7l/wheel/bpnet/premade 2020-07-06T05:54:37,237 copying build/lib/bpnet/premade/bpnet9-chipseq.gin -> build/bdist.linux-armv7l/wheel/bpnet/premade 2020-07-06T05:54:37,242 copying build/lib/bpnet/premade/bpnet9-ginspec.gin -> build/bdist.linux-armv7l/wheel/bpnet/premade 2020-07-06T05:54:37,248 copying build/lib/bpnet/premade/bpnet9-pyspec.gin -> build/bdist.linux-armv7l/wheel/bpnet/premade 2020-07-06T05:54:37,253 copying build/lib/bpnet/activations.py -> build/bdist.linux-armv7l/wheel/bpnet 2020-07-06T05:54:37,261 creating build/bdist.linux-armv7l/wheel/tests 2020-07-06T05:54:37,265 creating build/bdist.linux-armv7l/wheel/tests/modisco 2020-07-06T05:54:37,268 copying build/lib/tests/modisco/test_core.py -> build/bdist.linux-armv7l/wheel/tests/modisco 2020-07-06T05:54:37,274 copying build/lib/tests/modisco/__init__.py -> build/bdist.linux-armv7l/wheel/tests/modisco 2020-07-06T05:54:37,278 copying build/lib/tests/modisco/test_modisco_file.py -> build/bdist.linux-armv7l/wheel/tests/modisco 2020-07-06T05:54:37,284 copying build/lib/tests/modisco/test_pattern_instances.py -> build/bdist.linux-armv7l/wheel/tests/modisco 2020-07-06T05:54:37,291 creating build/bdist.linux-armv7l/wheel/tests/plot 2020-07-06T05:54:37,293 copying build/lib/tests/plot/__init__.py -> build/bdist.linux-armv7l/wheel/tests/plot 2020-07-06T05:54:37,298 copying build/lib/tests/plot/test_tracks.py -> build/bdist.linux-armv7l/wheel/tests/plot 2020-07-06T05:54:37,304 copying build/lib/tests/test_train.py -> build/bdist.linux-armv7l/wheel/tests 2020-07-06T05:54:37,311 creating build/bdist.linux-armv7l/wheel/tests/cli 2020-07-06T05:54:37,313 copying build/lib/tests/cli/test_train.py -> build/bdist.linux-armv7l/wheel/tests/cli 2020-07-06T05:54:37,320 copying build/lib/tests/cli/test_export_bw.py -> build/bdist.linux-armv7l/wheel/tests/cli 2020-07-06T05:54:37,325 copying build/lib/tests/cli/__init__.py -> build/bdist.linux-armv7l/wheel/tests/cli 2020-07-06T05:54:37,330 copying build/lib/tests/cli/test_contrib.py -> build/bdist.linux-armv7l/wheel/tests/cli 2020-07-06T05:54:37,335 copying build/lib/tests/cli/test_modisco.py -> build/bdist.linux-armv7l/wheel/tests/cli 2020-07-06T05:54:37,341 copying build/lib/tests/conftest.py -> build/bdist.linux-armv7l/wheel/tests 2020-07-06T05:54:37,347 copying build/lib/tests/test_seqmodel.py -> build/bdist.linux-armv7l/wheel/tests 2020-07-06T05:54:37,353 copying build/lib/tests/__init__.py -> build/bdist.linux-armv7l/wheel/tests 2020-07-06T05:54:37,357 copying build/lib/tests/configurables.py -> build/bdist.linux-armv7l/wheel/tests 2020-07-06T05:54:37,363 copying build/lib/tests/test_gin_parse.py -> build/bdist.linux-armv7l/wheel/tests 2020-07-06T05:54:37,368 copying build/lib/tests/test_contrib.py -> build/bdist.linux-armv7l/wheel/tests 2020-07-06T05:54:37,372 running install_egg_info 2020-07-06T05:54:37,394 Copying bpnet.egg-info to build/bdist.linux-armv7l/wheel/bpnet-0.0.23-py3.5.egg-info 2020-07-06T05:54:37,426 running install_scripts 2020-07-06T05:54:37,747 creating build/bdist.linux-armv7l/wheel/bpnet-0.0.23.dist-info/WHEEL 2020-07-06T05:54:39,503 Building wheel for bpnet (setup.py): finished with status 'done' 2020-07-06T05:54:39,552 Created wheel for bpnet: filename=bpnet-0.0.23-py3-none-any.whl size=2775015 sha256=16a3c686145c41939381f13558d11f6967f7530a14d44a97b001af257bcaaf8f 2020-07-06T05:54:39,553 Stored in directory: /tmp/pip-ephem-wheel-cache-i1br9z_a/wheels/91/69/60/0ef66fe8ac7e5a5943000a7dff3da6ab7f1408ee9298ae0b8f 2020-07-06T05:54:39,557 Successfully built bpnet 2020-07-06T05:54:40,044 Removed build tracker: '/tmp/pip-req-tracker-rc28yqrx'