2020-07-09T19:57:06,862 Created temporary directory: /tmp/pip-ephem-wheel-cache-dgi35apu 2020-07-09T19:57:06,867 Created temporary directory: /tmp/pip-req-tracker-gkwwve9f 2020-07-09T19:57:06,867 Initialized build tracking at /tmp/pip-req-tracker-gkwwve9f 2020-07-09T19:57:06,870 Created build tracker: /tmp/pip-req-tracker-gkwwve9f 2020-07-09T19:57:06,871 Entered build tracker: /tmp/pip-req-tracker-gkwwve9f 2020-07-09T19:57:06,872 Created temporary directory: /tmp/pip-wheel-wjihqy5e 2020-07-09T19:57:06,893 1 location(s) to search for versions of trtools: 2020-07-09T19:57:06,893 * https://pypi.org/simple/trtools/ 2020-07-09T19:57:06,894 Fetching project page and analyzing links: https://pypi.org/simple/trtools/ 2020-07-09T19:57:06,897 Getting page https://pypi.org/simple/trtools/ 2020-07-09T19:57:06,902 Found index url https://pypi.org/simple 2020-07-09T19:57:07,309 Found link https://files.pythonhosted.org/packages/d6/c2/0c1a331961356af54cd9f8356596bc68b3e2d2538abb5356a6b2725d0ff4/trtools-2.0.0.tar.gz#sha256=fb25ec669ba3f8f2ef9ef2ade31992840e4c57b428c016c8d7176b6ad9ec1a18 (from https://pypi.org/simple/trtools/), version: 2.0.0 2020-07-09T19:57:07,310 Found link https://files.pythonhosted.org/packages/13/9e/74698b4d88dd53e5473fe16e9aec25fcf0ee21f41ee080fd856f87114744/trtools-2.0.1.tar.gz#sha256=e37314f9b405629cc7e22079ccea28f8fc98a277ba5270f5c3cb83bdfd49008a (from https://pypi.org/simple/trtools/), version: 2.0.1 2020-07-09T19:57:07,311 Found link https://files.pythonhosted.org/packages/4f/9c/67295087fa44843c078ddeca9a474ced1f37e5dc4e7fb868049dc0b4e55b/trtools-2.0.2.tar.gz#sha256=2d3d068e732420af6b6f7c79b7bed7e2e27c1167fa0727bbbb4470d455a49478 (from https://pypi.org/simple/trtools/), version: 2.0.2 2020-07-09T19:57:07,313 Skipping link: No binaries permitted for trtools: https://files.pythonhosted.org/packages/90/2e/ad9f798558846f3785a06d71ba784755742964adfdc37ccb0995b47fc5e4/trtools-2.0.4-py3-none-any.whl#sha256=88fc5d8a75f8dd6efaa14ad51b0480bf17279de08c8f289a7f2f7c9b36d0da2f (from https://pypi.org/simple/trtools/) 2020-07-09T19:57:07,314 Found link https://files.pythonhosted.org/packages/1c/43/ffa868b6fd05bcd3b81339d68ba6d806e26d9b5ebe6e3421474b2f1f9f61/trtools-2.0.4.tar.gz#sha256=93722d2f6b5a937e024fa718b74ae3182ad07ba9bc492c65a6a87346425c085b (from https://pypi.org/simple/trtools/), version: 2.0.4 2020-07-09T19:57:07,315 Skipping link: No binaries permitted for trtools: https://files.pythonhosted.org/packages/89/0a/4e3136520f7d079f0182b18e38a5c47e987e2687186e6a182ba0f24f4482/trtools-2.0.5a0-py3-none-any.whl#sha256=b3210fac7b838ac616da0874fd35c813c12ef363490e2935a99a268e3214db5c (from https://pypi.org/simple/trtools/) 2020-07-09T19:57:07,316 Found link https://files.pythonhosted.org/packages/d2/5a/1a7a5f28f3cb29a7444bdf3013f6f3ae86a1f35f13a79072d4df90354956/trtools-2.0.5a0.tar.gz#sha256=4e413344e2c5dd7000b81017055325675c046e0e86114fc386caf5a8798b42ec (from https://pypi.org/simple/trtools/), version: 2.0.5a0 2020-07-09T19:57:07,317 Skipping link: No binaries permitted for trtools: https://files.pythonhosted.org/packages/8b/ec/71b2e7c2e44681ae7e3d6b177ef5e62eb9776a444a8a48b09b9c0d37df09/trtools-2.0.5-py3-none-any.whl#sha256=f89df9883ccd4292d6205487056b0780ccf940c3ec91b5fbbb3a471e6ea66447 (from https://pypi.org/simple/trtools/) 2020-07-09T19:57:07,318 Found link https://files.pythonhosted.org/packages/ce/31/29d3d50bd01711693b7b309084df47107aa87c075022f1bef1f8e642c25c/trtools-2.0.5.tar.gz#sha256=4eb312d963157ecfd12d7ec84426e92908dea9d8b0d57679d17f66f1937ffdcf (from https://pypi.org/simple/trtools/), version: 2.0.5 2020-07-09T19:57:07,320 Skipping link: No binaries permitted for trtools: https://files.pythonhosted.org/packages/1c/c4/84c7e1dec17cfe2a6634a3be9b911813ab4c20590b2778c5e1d9490dcb9c/trtools-2.0.10-py3-none-any.whl#sha256=42db7ee1ba827aa674157cfdcf83d616ae24c1dabdb120ce78752452627753c5 (from https://pypi.org/simple/trtools/) 2020-07-09T19:57:07,321 Found link https://files.pythonhosted.org/packages/7b/22/7156a9ad5f840fd4ba158010e0082a9fbb7acfaaac31d73f62040cac6ac2/trtools-2.0.10.tar.gz#sha256=a92a37cc4e654d0c13be78b88850090bfb83c1a58761e9de6c5b51a4f35f6ca2 (from https://pypi.org/simple/trtools/), version: 2.0.10 2020-07-09T19:57:07,322 Skipping link: No binaries permitted for trtools: https://files.pythonhosted.org/packages/2e/ff/0e9f11f41350c6b9e64c9fac03460eb584484cdbd0ae0b1d9391a4f766a7/trtools-2.0.11-py3-none-any.whl#sha256=620cfc07ca346c6ca8d8e5dfd7b2d4560293de8ce49908482732b75d5f6fab48 (from https://pypi.org/simple/trtools/) 2020-07-09T19:57:07,323 Found link https://files.pythonhosted.org/packages/ce/62/3e5bd5bd35241e92d2100aa2089903d06ed3b3e29f3ad7d3413ec4d2c14e/trtools-2.0.11.tar.gz#sha256=81ba6b3e9ae26f2cb995f9b71102ac930984b38d4048c107fbc6cb6649aef32b (from https://pypi.org/simple/trtools/), version: 2.0.11 2020-07-09T19:57:07,324 Skipping link: No binaries permitted for trtools: https://files.pythonhosted.org/packages/53/15/7b4bd38ca30f86cf25f7394295787778c6eca02f5fa22310c98a7ab3e341/trtools-2.0.12-py3-none-any.whl#sha256=f706850fb174af55d1b1897fddd2ac1de60b0ad3c0484c3b489a7b5e199367f1 (from https://pypi.org/simple/trtools/) (requires-python:>=3.5) 2020-07-09T19:57:07,327 Found link https://files.pythonhosted.org/packages/6e/02/20ed6c89904ae91e10635d4aaa5c37aca43c46f878d0271103b0836637b4/trtools-2.0.12.tar.gz#sha256=aa417800c5cf1eed788ab4a4468c4fdc49976c31ab507ba164a78b7debd728ae (from https://pypi.org/simple/trtools/) (requires-python:>=3.5), version: 2.0.12 2020-07-09T19:57:07,328 Skipping link: No binaries permitted for trtools: https://files.pythonhosted.org/packages/8c/0e/12849b83ec628b4bc113babe57409e6be1da304ffdcd63e654bd0e4a4b2e/trtools-2.0.13-py3-none-any.whl#sha256=5fade8dda90eac1a149e1fde68a89a064ad6eafa6147e478745a1ab375eb3a9a (from https://pypi.org/simple/trtools/) (requires-python:>=3.5) 2020-07-09T19:57:07,330 Found link https://files.pythonhosted.org/packages/6e/61/26a4efbc30c6b0b512094a15ddea66e00aec2906ca441e674fcb33a476a6/trtools-2.0.13.tar.gz#sha256=9c53a32fdc412cb4010696d426fe5bc6ce3b34ac26f36e6c66b7a46af095be51 (from https://pypi.org/simple/trtools/) (requires-python:>=3.5), version: 2.0.13 2020-07-09T19:57:07,331 Skipping link: No binaries permitted for trtools: https://files.pythonhosted.org/packages/2f/cc/2e8242f489b0e95c14b37f6ded9c5623cef4254d537b8ef75c9e393d0704/trtools-2.0.14-py3-none-any.whl#sha256=cc6ba1a97f107507c8566155a7bb9891d0b2e3d4ae32a707f946ea5a01e34fa1 (from https://pypi.org/simple/trtools/) (requires-python:>=3.5) 2020-07-09T19:57:07,333 Found link https://files.pythonhosted.org/packages/7f/b7/20d754a2b03ff641ab1353ca7392e4eac54e86683ceaea1eec634a4e1d58/trtools-2.0.14.tar.gz#sha256=65198a4f3c22185fadcb88db3760cc67c20f8c2ef3bf8de3c8f7127bef126038 (from https://pypi.org/simple/trtools/) (requires-python:>=3.5), version: 2.0.14 2020-07-09T19:57:07,334 Skipping link: No binaries permitted for trtools: https://files.pythonhosted.org/packages/70/71/b62113da362afc026f8ca5124a7fae85d2eb7ebe7f0c6d5a93521cd7dbb2/trtools-2.0.15-py3-none-any.whl#sha256=ede051ffccf6fd979eaeb52a428f18b5d7cee7c866ea3692eb6bbcea3977aa0d (from https://pypi.org/simple/trtools/) (requires-python:>=3.5) 2020-07-09T19:57:07,336 Found link https://files.pythonhosted.org/packages/f6/ae/a38a88622b173b2d7f6c2210e99ec8c63e0a49e41bbe01fe46bdb9e99f98/trtools-2.0.15.tar.gz#sha256=1df239228f9568146344c7d4be60cd83cd49500fc7e56b9a954b55affcd3a68a (from https://pypi.org/simple/trtools/) (requires-python:>=3.5), version: 2.0.15 2020-07-09T19:57:07,337 Skipping link: No binaries permitted for trtools: https://files.pythonhosted.org/packages/b0/40/64641843d19bd9e9b8617403a8cf022381422bd55af4b04694e5118657aa/trtools-2.0.16a0-py3-none-any.whl#sha256=68213701c06c2aaf172081d2d31838140f9e68bd065ed0bc436680bb7ba660ab (from https://pypi.org/simple/trtools/) (requires-python:>=3.5) 2020-07-09T19:57:07,339 Found link https://files.pythonhosted.org/packages/65/dc/d359ba078b9bd90289f1ad1d8b230dcba0134a6b0e33aabc79224703cc69/trtools-2.0.16a0.tar.gz#sha256=cb5bb6b794a608ace3f4b006b7a81483b87a714ca7cac3e7e870ca8395ebb357 (from https://pypi.org/simple/trtools/) (requires-python:>=3.5), version: 2.0.16a0 2020-07-09T19:57:07,341 Skipping link: No binaries permitted for trtools: https://files.pythonhosted.org/packages/94/e3/979fb8d7b397d750f3b7bc52377f2e84a7dddad882995b0c77e2f219baa3/trtools-2.0.16-py3-none-any.whl#sha256=a01ce9e9d89b759ac5e2a71a5e0f82354bbde8e12b4374f2ab0eed3b542abe58 (from https://pypi.org/simple/trtools/) (requires-python:>=3.5) 2020-07-09T19:57:07,342 Found link https://files.pythonhosted.org/packages/0e/56/9792e66952a364a91f3f3c9c0f0b52ede693e32143b996bce7478a89b5b3/trtools-2.0.16.tar.gz#sha256=c7ad71cc445d05c3c9588d94fb215dd4d4fdb8acd6347c9a1f48c2af4d9af60e (from https://pypi.org/simple/trtools/) (requires-python:>=3.5), version: 2.0.16 2020-07-09T19:57:07,344 Skipping link: No binaries permitted for trtools: https://files.pythonhosted.org/packages/7e/ac/810ee9cce3b454037db1819b7ec23f3d6146fa2aee66906ff0bba83dd685/trtools-2.0.17-py3-none-any.whl#sha256=039c62aaf6e238d67fd8e3a50cbfa21d1461cea4120782e4fa56874acc7e35b2 (from https://pypi.org/simple/trtools/) (requires-python:>=3.5) 2020-07-09T19:57:07,345 Found link https://files.pythonhosted.org/packages/33/fc/c78d3e8859784270109cb718532df72b721f902ddf8d87fb1e596beaa447/trtools-2.0.17.tar.gz#sha256=b69e696331719222509ea462559ebb1a31d65c3d7706a6538858d82a87190bad (from https://pypi.org/simple/trtools/) (requires-python:>=3.5), version: 2.0.17 2020-07-09T19:57:07,347 Skipping link: No binaries permitted for trtools: https://files.pythonhosted.org/packages/ac/9b/faa2a206ab0560bb67f6945b662bd90dee470ba04cffdf46341a93efcd94/trtools-2.0.18-py3-none-any.whl#sha256=06d0176666ef34ba766796464d9d762ffc3c6d026d78146ab05a6cc89be1b0ad (from https://pypi.org/simple/trtools/) (requires-python:>=3.5) 2020-07-09T19:57:07,348 Found link https://files.pythonhosted.org/packages/46/26/4b674d19383287bb04d37ccf172954f8178566b9454d88f7651987082d21/trtools-2.0.18.tar.gz#sha256=0af912ffb09cb7fa8c0d78f4adcbb84d13bf7282b50d9776941a037bddb9754d (from https://pypi.org/simple/trtools/) (requires-python:>=3.5), version: 2.0.18 2020-07-09T19:57:07,350 Skipping link: No binaries permitted for trtools: https://files.pythonhosted.org/packages/40/6e/e6d63adbffbc1e4da0b1f2a3461c044e6d94295fce812b0f77abd7a1f04e/trtools-3.0.0-py3-none-any.whl#sha256=745650fefc9b76f6885e0ed3a99c695d2b04e32ea8f3afb6ac296d99e2399d7a (from https://pypi.org/simple/trtools/) (requires-python:>=3.5) 2020-07-09T19:57:07,352 Found link https://files.pythonhosted.org/packages/79/57/a253e5b40ea3432448cb37bd5bcfad1848e3c8dfe33cfa1c3e4465e63849/trtools-3.0.0.tar.gz#sha256=cce02fa0c6d779cd56980ec8edce2ffeb83a51c051c972b0f4e84cd4ee1f2bf0 (from https://pypi.org/simple/trtools/) (requires-python:>=3.5), version: 3.0.0 2020-07-09T19:57:07,369 Given no hashes to check 1 links for project 'trtools': discarding no candidates 2020-07-09T19:57:07,371 Using version 3.0.0 (newest of versions: 3.0.0) 2020-07-09T19:57:07,379 Collecting trtools==3.0.0 2020-07-09T19:57:07,384 Created temporary directory: /tmp/pip-unpack-llau_cd8 2020-07-09T19:57:07,618 Downloading trtools-3.0.0.tar.gz (66 kB) 2020-07-09T19:57:07,978 Added trtools==3.0.0 from https://files.pythonhosted.org/packages/79/57/a253e5b40ea3432448cb37bd5bcfad1848e3c8dfe33cfa1c3e4465e63849/trtools-3.0.0.tar.gz#sha256=cce02fa0c6d779cd56980ec8edce2ffeb83a51c051c972b0f4e84cd4ee1f2bf0 to build tracker '/tmp/pip-req-tracker-gkwwve9f' 2020-07-09T19:57:07,981 Running setup.py (path:/tmp/pip-wheel-wjihqy5e/trtools/setup.py) egg_info for package trtools 2020-07-09T19:57:07,983 Created temporary directory: /tmp/pip-pip-egg-info-ase21qce 2020-07-09T19:57:07,983 Running command python setup.py egg_info 2020-07-09T19:57:10,967 running egg_info 2020-07-09T19:57:10,976 creating /tmp/pip-pip-egg-info-ase21qce/trtools.egg-info 2020-07-09T19:57:10,980 writing dependency_links to /tmp/pip-pip-egg-info-ase21qce/trtools.egg-info/dependency_links.txt 2020-07-09T19:57:10,983 writing top-level names to /tmp/pip-pip-egg-info-ase21qce/trtools.egg-info/top_level.txt 2020-07-09T19:57:10,986 writing requirements to /tmp/pip-pip-egg-info-ase21qce/trtools.egg-info/requires.txt 2020-07-09T19:57:10,989 writing entry points to /tmp/pip-pip-egg-info-ase21qce/trtools.egg-info/entry_points.txt 2020-07-09T19:57:10,991 writing /tmp/pip-pip-egg-info-ase21qce/trtools.egg-info/PKG-INFO 2020-07-09T19:57:10,998 writing manifest file '/tmp/pip-pip-egg-info-ase21qce/trtools.egg-info/SOURCES.txt' 2020-07-09T19:57:11,481 reading manifest file '/tmp/pip-pip-egg-info-ase21qce/trtools.egg-info/SOURCES.txt' 2020-07-09T19:57:11,486 reading manifest template 'MANIFEST.in' 2020-07-09T19:57:11,490 /usr/lib/python3.5/distutils/dist.py:261: UserWarning: Unknown distribution option: 'license_file' 2020-07-09T19:57:11,491 warnings.warn(msg) 2020-07-09T19:57:11,492 warning: no previously-included files found matching 'trtools/testsupport/sample_vcfs' 2020-07-09T19:57:11,495 warning: no previously-included files found matching 'trtools/testsupport/sample_regions' 2020-07-09T19:57:11,506 writing manifest file '/tmp/pip-pip-egg-info-ase21qce/trtools.egg-info/SOURCES.txt' 2020-07-09T19:57:11,673 Source in /tmp/pip-wheel-wjihqy5e/trtools has version 3.0.0, which satisfies requirement trtools==3.0.0 from https://files.pythonhosted.org/packages/79/57/a253e5b40ea3432448cb37bd5bcfad1848e3c8dfe33cfa1c3e4465e63849/trtools-3.0.0.tar.gz#sha256=cce02fa0c6d779cd56980ec8edce2ffeb83a51c051c972b0f4e84cd4ee1f2bf0 2020-07-09T19:57:11,675 Removed trtools==3.0.0 from https://files.pythonhosted.org/packages/79/57/a253e5b40ea3432448cb37bd5bcfad1848e3c8dfe33cfa1c3e4465e63849/trtools-3.0.0.tar.gz#sha256=cce02fa0c6d779cd56980ec8edce2ffeb83a51c051c972b0f4e84cd4ee1f2bf0 from build tracker '/tmp/pip-req-tracker-gkwwve9f' 2020-07-09T19:57:11,680 Building wheels for collected packages: trtools 2020-07-09T19:57:11,690 Created temporary directory: /tmp/pip-wheel-ni8p8dc_ 2020-07-09T19:57:11,692 Building wheel for trtools (setup.py): started 2020-07-09T19:57:11,693 Destination directory: /tmp/pip-wheel-ni8p8dc_ 2020-07-09T19:57:11,694 Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-wjihqy5e/trtools/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-wjihqy5e/trtools/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-ni8p8dc_ 2020-07-09T19:57:14,210 /usr/lib/python3.5/distutils/dist.py:261: UserWarning: Unknown distribution option: 'license_file' 2020-07-09T19:57:14,211 warnings.warn(msg) 2020-07-09T19:57:14,696 running bdist_wheel 2020-07-09T19:57:14,716 running build 2020-07-09T19:57:14,717 running build_py 2020-07-09T19:57:15,163 creating build 2020-07-09T19:57:15,164 creating build/lib 2020-07-09T19:57:15,165 creating build/lib/trtools 2020-07-09T19:57:15,168 copying trtools/__init__.py -> build/lib/trtools 2020-07-09T19:57:15,173 copying trtools/version.py -> build/lib/trtools 2020-07-09T19:57:15,178 creating build/lib/trtools/testsupport 2020-07-09T19:57:15,181 copying trtools/testsupport/dataloader.py -> build/lib/trtools/testsupport 2020-07-09T19:57:15,185 copying trtools/testsupport/__init__.py -> build/lib/trtools/testsupport 2020-07-09T19:57:15,190 creating build/lib/trtools/mergeSTR 2020-07-09T19:57:15,192 copying trtools/mergeSTR/__init__.py -> build/lib/trtools/mergeSTR 2020-07-09T19:57:15,197 copying trtools/mergeSTR/mergeSTR.py -> build/lib/trtools/mergeSTR 2020-07-09T19:57:15,205 creating build/lib/trtools/compareSTR 2020-07-09T19:57:15,207 copying trtools/compareSTR/compareSTR.py -> build/lib/trtools/compareSTR 2020-07-09T19:57:15,215 copying trtools/compareSTR/__init__.py -> build/lib/trtools/compareSTR 2020-07-09T19:57:15,220 creating build/lib/trtools/dumpSTR 2020-07-09T19:57:15,223 copying trtools/dumpSTR/dumpSTR.py -> build/lib/trtools/dumpSTR 2020-07-09T19:57:15,233 copying trtools/dumpSTR/filters.py -> build/lib/trtools/dumpSTR 2020-07-09T19:57:15,240 copying trtools/dumpSTR/__init__.py -> build/lib/trtools/dumpSTR 2020-07-09T19:57:15,246 creating build/lib/trtools/statSTR 2020-07-09T19:57:15,248 copying trtools/statSTR/statSTR.py -> build/lib/trtools/statSTR 2020-07-09T19:57:15,255 copying trtools/statSTR/__init__.py -> build/lib/trtools/statSTR 2020-07-09T19:57:15,261 creating build/lib/trtools/utils 2020-07-09T19:57:15,263 copying trtools/utils/mergeutils.py -> build/lib/trtools/utils 2020-07-09T19:57:15,270 copying trtools/utils/tr_harmonizer.py -> build/lib/trtools/utils 2020-07-09T19:57:15,280 copying trtools/utils/utils.py -> build/lib/trtools/utils 2020-07-09T19:57:15,286 copying trtools/utils/common.py -> build/lib/trtools/utils 2020-07-09T19:57:15,291 copying trtools/utils/__init__.py -> build/lib/trtools/utils 2020-07-09T19:57:15,296 creating build/lib/trtools/qcSTR 2020-07-09T19:57:15,299 copying trtools/qcSTR/qcSTR.py -> build/lib/trtools/qcSTR 2020-07-09T19:57:15,307 copying trtools/qcSTR/__init__.py -> build/lib/trtools/qcSTR 2020-07-09T19:57:15,313 creating build/lib/trtools/mergeSTR/tests 2020-07-09T19:57:15,316 copying trtools/mergeSTR/tests/__init__.py -> build/lib/trtools/mergeSTR/tests 2020-07-09T19:57:15,321 copying trtools/mergeSTR/tests/test_mergeSTR.py -> build/lib/trtools/mergeSTR/tests 2020-07-09T19:57:15,328 creating build/lib/trtools/compareSTR/tests 2020-07-09T19:57:15,331 copying trtools/compareSTR/tests/__init__.py -> build/lib/trtools/compareSTR/tests 2020-07-09T19:57:15,337 copying trtools/compareSTR/tests/test_compareSTR.py -> build/lib/trtools/compareSTR/tests 2020-07-09T19:57:15,344 creating build/lib/trtools/dumpSTR/tests 2020-07-09T19:57:15,347 copying trtools/dumpSTR/tests/test_filters.py -> build/lib/trtools/dumpSTR/tests 2020-07-09T19:57:15,354 copying trtools/dumpSTR/tests/test_dumpSTR.py -> build/lib/trtools/dumpSTR/tests 2020-07-09T19:57:15,361 copying trtools/dumpSTR/tests/__init__.py -> build/lib/trtools/dumpSTR/tests 2020-07-09T19:57:15,367 creating build/lib/trtools/statSTR/tests 2020-07-09T19:57:15,371 copying trtools/statSTR/tests/test_statSTR.py -> build/lib/trtools/statSTR/tests 2020-07-09T19:57:15,380 copying trtools/statSTR/tests/__init__.py -> build/lib/trtools/statSTR/tests 2020-07-09T19:57:15,389 creating build/lib/trtools/utils/tests 2020-07-09T19:57:15,392 copying trtools/utils/tests/test_trharmonizer.py -> build/lib/trtools/utils/tests 2020-07-09T19:57:15,400 copying trtools/utils/tests/test_common.py -> build/lib/trtools/utils/tests 2020-07-09T19:57:15,405 copying trtools/utils/tests/test_utils.py -> build/lib/trtools/utils/tests 2020-07-09T19:57:15,411 copying trtools/utils/tests/__init__.py -> build/lib/trtools/utils/tests 2020-07-09T19:57:15,415 copying trtools/utils/tests/test_mergeutils.py -> build/lib/trtools/utils/tests 2020-07-09T19:57:15,421 creating build/lib/trtools/qcSTR/tests 2020-07-09T19:57:15,423 copying trtools/qcSTR/tests/test_qcSTR.py -> build/lib/trtools/qcSTR/tests 2020-07-09T19:57:15,430 copying trtools/qcSTR/tests/__init__.py -> build/lib/trtools/qcSTR/tests 2020-07-09T19:57:15,433 running egg_info 2020-07-09T19:57:15,471 writing requirements to trtools.egg-info/requires.txt 2020-07-09T19:57:15,474 writing top-level names to trtools.egg-info/top_level.txt 2020-07-09T19:57:15,477 writing dependency_links to trtools.egg-info/dependency_links.txt 2020-07-09T19:57:15,480 writing entry points to trtools.egg-info/entry_points.txt 2020-07-09T19:57:15,483 writing trtools.egg-info/PKG-INFO 2020-07-09T19:57:15,512 reading manifest file 'trtools.egg-info/SOURCES.txt' 2020-07-09T19:57:15,519 reading manifest template 'MANIFEST.in' 2020-07-09T19:57:15,523 warning: no previously-included files found matching 'trtools/testsupport/sample_vcfs' 2020-07-09T19:57:15,525 warning: no previously-included files found matching 'trtools/testsupport/sample_regions' 2020-07-09T19:57:15,538 writing manifest file 'trtools.egg-info/SOURCES.txt' 2020-07-09T19:57:15,547 copying trtools/testsupport/test_trtools.sh -> build/lib/trtools/testsupport 2020-07-09T19:57:15,570 running build_scripts 2020-07-09T19:57:15,571 creating build/scripts-3.5 2020-07-09T19:57:15,574 copying trtools/testsupport/test_trtools.sh -> build/scripts-3.5 2020-07-09T19:57:15,587 installing to build/bdist.linux-armv7l/wheel 2020-07-09T19:57:15,588 running install 2020-07-09T19:57:15,591 running install_lib 2020-07-09T19:57:15,600 creating build/bdist.linux-armv7l 2020-07-09T19:57:15,601 creating build/bdist.linux-armv7l/wheel 2020-07-09T19:57:15,605 creating build/bdist.linux-armv7l/wheel/trtools 2020-07-09T19:57:15,609 creating build/bdist.linux-armv7l/wheel/trtools/testsupport 2020-07-09T19:57:15,612 copying build/lib/trtools/testsupport/test_trtools.sh -> build/bdist.linux-armv7l/wheel/trtools/testsupport 2020-07-09T19:57:15,617 copying build/lib/trtools/testsupport/dataloader.py -> build/bdist.linux-armv7l/wheel/trtools/testsupport 2020-07-09T19:57:15,621 copying build/lib/trtools/testsupport/__init__.py -> build/bdist.linux-armv7l/wheel/trtools/testsupport 2020-07-09T19:57:15,626 creating build/bdist.linux-armv7l/wheel/trtools/mergeSTR 2020-07-09T19:57:15,628 copying build/lib/trtools/mergeSTR/__init__.py -> build/bdist.linux-armv7l/wheel/trtools/mergeSTR 2020-07-09T19:57:15,635 creating build/bdist.linux-armv7l/wheel/trtools/mergeSTR/tests 2020-07-09T19:57:15,637 copying build/lib/trtools/mergeSTR/tests/__init__.py -> build/bdist.linux-armv7l/wheel/trtools/mergeSTR/tests 2020-07-09T19:57:15,642 copying build/lib/trtools/mergeSTR/tests/test_mergeSTR.py -> build/bdist.linux-armv7l/wheel/trtools/mergeSTR/tests 2020-07-09T19:57:15,648 copying build/lib/trtools/mergeSTR/mergeSTR.py -> build/bdist.linux-armv7l/wheel/trtools/mergeSTR 2020-07-09T19:57:15,656 creating build/bdist.linux-armv7l/wheel/trtools/compareSTR 2020-07-09T19:57:15,658 copying build/lib/trtools/compareSTR/compareSTR.py -> build/bdist.linux-armv7l/wheel/trtools/compareSTR 2020-07-09T19:57:15,665 copying build/lib/trtools/compareSTR/__init__.py -> build/bdist.linux-armv7l/wheel/trtools/compareSTR 2020-07-09T19:57:15,671 creating build/bdist.linux-armv7l/wheel/trtools/compareSTR/tests 2020-07-09T19:57:15,673 copying build/lib/trtools/compareSTR/tests/__init__.py -> build/bdist.linux-armv7l/wheel/trtools/compareSTR/tests 2020-07-09T19:57:15,677 copying build/lib/trtools/compareSTR/tests/test_compareSTR.py -> build/bdist.linux-armv7l/wheel/trtools/compareSTR/tests 2020-07-09T19:57:15,684 creating build/bdist.linux-armv7l/wheel/trtools/dumpSTR 2020-07-09T19:57:15,686 copying build/lib/trtools/dumpSTR/dumpSTR.py -> build/bdist.linux-armv7l/wheel/trtools/dumpSTR 2020-07-09T19:57:15,695 copying build/lib/trtools/dumpSTR/filters.py -> build/bdist.linux-armv7l/wheel/trtools/dumpSTR 2020-07-09T19:57:15,702 copying build/lib/trtools/dumpSTR/__init__.py -> build/bdist.linux-armv7l/wheel/trtools/dumpSTR 2020-07-09T19:57:15,708 creating build/bdist.linux-armv7l/wheel/trtools/dumpSTR/tests 2020-07-09T19:57:15,710 copying build/lib/trtools/dumpSTR/tests/test_filters.py -> build/bdist.linux-armv7l/wheel/trtools/dumpSTR/tests 2020-07-09T19:57:15,717 copying build/lib/trtools/dumpSTR/tests/test_dumpSTR.py -> build/bdist.linux-armv7l/wheel/trtools/dumpSTR/tests 2020-07-09T19:57:15,723 copying build/lib/trtools/dumpSTR/tests/__init__.py -> build/bdist.linux-armv7l/wheel/trtools/dumpSTR/tests 2020-07-09T19:57:15,728 creating build/bdist.linux-armv7l/wheel/trtools/statSTR 2020-07-09T19:57:15,730 copying build/lib/trtools/statSTR/statSTR.py -> build/bdist.linux-armv7l/wheel/trtools/statSTR 2020-07-09T19:57:15,737 copying build/lib/trtools/statSTR/__init__.py -> build/bdist.linux-armv7l/wheel/trtools/statSTR 2020-07-09T19:57:15,743 creating build/bdist.linux-armv7l/wheel/trtools/statSTR/tests 2020-07-09T19:57:15,745 copying build/lib/trtools/statSTR/tests/test_statSTR.py -> build/bdist.linux-armv7l/wheel/trtools/statSTR/tests 2020-07-09T19:57:15,750 copying build/lib/trtools/statSTR/tests/__init__.py -> build/bdist.linux-armv7l/wheel/trtools/statSTR/tests 2020-07-09T19:57:15,754 copying build/lib/trtools/__init__.py -> build/bdist.linux-armv7l/wheel/trtools 2020-07-09T19:57:15,758 copying build/lib/trtools/version.py -> build/bdist.linux-armv7l/wheel/trtools 2020-07-09T19:57:15,764 creating build/bdist.linux-armv7l/wheel/trtools/utils 2020-07-09T19:57:15,766 copying build/lib/trtools/utils/mergeutils.py -> build/bdist.linux-armv7l/wheel/trtools/utils 2020-07-09T19:57:15,772 copying build/lib/trtools/utils/tr_harmonizer.py -> build/bdist.linux-armv7l/wheel/trtools/utils 2020-07-09T19:57:15,782 copying build/lib/trtools/utils/utils.py -> build/bdist.linux-armv7l/wheel/trtools/utils 2020-07-09T19:57:15,788 copying build/lib/trtools/utils/common.py -> build/bdist.linux-armv7l/wheel/trtools/utils 2020-07-09T19:57:15,793 copying build/lib/trtools/utils/__init__.py -> build/bdist.linux-armv7l/wheel/trtools/utils 2020-07-09T19:57:15,798 creating build/bdist.linux-armv7l/wheel/trtools/utils/tests 2020-07-09T19:57:15,800 copying build/lib/trtools/utils/tests/test_trharmonizer.py -> build/bdist.linux-armv7l/wheel/trtools/utils/tests 2020-07-09T19:57:15,808 copying build/lib/trtools/utils/tests/test_common.py -> build/bdist.linux-armv7l/wheel/trtools/utils/tests 2020-07-09T19:57:15,813 copying build/lib/trtools/utils/tests/test_utils.py -> build/bdist.linux-armv7l/wheel/trtools/utils/tests 2020-07-09T19:57:15,818 copying build/lib/trtools/utils/tests/__init__.py -> build/bdist.linux-armv7l/wheel/trtools/utils/tests 2020-07-09T19:57:15,822 copying build/lib/trtools/utils/tests/test_mergeutils.py -> build/bdist.linux-armv7l/wheel/trtools/utils/tests 2020-07-09T19:57:15,828 creating build/bdist.linux-armv7l/wheel/trtools/qcSTR 2020-07-09T19:57:15,830 copying build/lib/trtools/qcSTR/qcSTR.py -> build/bdist.linux-armv7l/wheel/trtools/qcSTR 2020-07-09T19:57:15,838 copying build/lib/trtools/qcSTR/__init__.py -> build/bdist.linux-armv7l/wheel/trtools/qcSTR 2020-07-09T19:57:15,843 creating build/bdist.linux-armv7l/wheel/trtools/qcSTR/tests 2020-07-09T19:57:15,845 copying build/lib/trtools/qcSTR/tests/test_qcSTR.py -> build/bdist.linux-armv7l/wheel/trtools/qcSTR/tests 2020-07-09T19:57:15,852 copying build/lib/trtools/qcSTR/tests/__init__.py -> build/bdist.linux-armv7l/wheel/trtools/qcSTR/tests 2020-07-09T19:57:15,855 running install_egg_info 2020-07-09T19:57:15,877 Copying trtools.egg-info to build/bdist.linux-armv7l/wheel/trtools-3.0.0-py3.5.egg-info 2020-07-09T19:57:15,911 running install_scripts 2020-07-09T19:57:16,074 creating build/bdist.linux-armv7l/wheel/trtools-3.0.0.data 2020-07-09T19:57:16,075 creating build/bdist.linux-armv7l/wheel/trtools-3.0.0.data/scripts 2020-07-09T19:57:16,078 copying build/scripts-3.5/test_trtools.sh -> build/bdist.linux-armv7l/wheel/trtools-3.0.0.data/scripts 2020-07-09T19:57:16,082 changing mode of build/bdist.linux-armv7l/wheel/trtools-3.0.0.data/scripts/test_trtools.sh to 755 2020-07-09T19:57:16,172 creating build/bdist.linux-armv7l/wheel/trtools-3.0.0.dist-info/WHEEL 2020-07-09T19:57:16,694 Building wheel for trtools (setup.py): finished with status 'done' 2020-07-09T19:57:16,699 Created wheel for trtools: filename=trtools-3.0.0-py3-none-any.whl size=77626 sha256=73f567a0aecbce433c7760ffd11d10a5858dab55980683a806745080ce581871 2020-07-09T19:57:16,700 Stored in directory: /tmp/pip-ephem-wheel-cache-dgi35apu/wheels/3d/18/31/e6e4f09dcdff30a4aea29671862ebf1be777a4b8f007cbb5f5 2020-07-09T19:57:16,705 Successfully built trtools 2020-07-09T19:57:16,725 Removed build tracker: '/tmp/pip-req-tracker-gkwwve9f'