2020-07-16T05:29:19,305 Created temporary directory: /tmp/pip-ephem-wheel-cache-ukq5afsw 2020-07-16T05:29:19,309 Created temporary directory: /tmp/pip-req-tracker-ipumilez 2020-07-16T05:29:19,310 Initialized build tracking at /tmp/pip-req-tracker-ipumilez 2020-07-16T05:29:19,312 Created build tracker: /tmp/pip-req-tracker-ipumilez 2020-07-16T05:29:19,312 Entered build tracker: /tmp/pip-req-tracker-ipumilez 2020-07-16T05:29:19,314 Created temporary directory: /tmp/pip-wheel-b5elhuhq 2020-07-16T05:29:19,330 1 location(s) to search for versions of pybiopax: 2020-07-16T05:29:19,330 * https://pypi.org/simple/pybiopax/ 2020-07-16T05:29:19,331 Fetching project page and analyzing links: https://pypi.org/simple/pybiopax/ 2020-07-16T05:29:19,333 Getting page https://pypi.org/simple/pybiopax/ 2020-07-16T05:29:19,337 Found index url https://pypi.org/simple 2020-07-16T05:29:19,654 Skipping link: No binaries permitted for pybiopax: https://files.pythonhosted.org/packages/c7/88/02957c31f6e5a3eec52931572d0d8a1a8b79ccba35528ac1d833b67903ed/pybiopax-0.0.1-py3-none-any.whl#sha256=8a2bf2a324a782e0ab5adc5c841746d918d023ba07761260e1208e30af645ca4 (from https://pypi.org/simple/pybiopax/) 2020-07-16T05:29:19,655 Found link https://files.pythonhosted.org/packages/f9/ce/534092d6719b240fa618bd7f109330476855e0a87579c0629fe65cfc2aa6/pybiopax-0.0.1.tar.gz#sha256=fc555ecb9fe4d94340ba66355704d57b618efed91419d93d79fc65a04dc07103 (from https://pypi.org/simple/pybiopax/), version: 0.0.1 2020-07-16T05:29:19,656 Skipping link: No binaries permitted for pybiopax: https://files.pythonhosted.org/packages/c9/3f/2fb307100ca7aff02d37593ce39d8020c019d7e4181a7af7677e7c8aa1aa/pybiopax-0.0.2-py3-none-any.whl#sha256=4dbcd1fbf6e4a4924245116039015556a3097d20e355f8a1c9850f20b38c06f0 (from https://pypi.org/simple/pybiopax/) 2020-07-16T05:29:19,657 Found link https://files.pythonhosted.org/packages/44/0c/377ce9e04018c10bad47ab8d4f08ef903004f5a129861371ad2e953de022/pybiopax-0.0.2.tar.gz#sha256=344c400c88e00cb09289aeeb3333083772cf7650501ac572f2cf9222b95cf872 (from https://pypi.org/simple/pybiopax/), version: 0.0.2 2020-07-16T05:29:19,658 Skipping link: No binaries permitted for pybiopax: https://files.pythonhosted.org/packages/e7/d6/85ba100b73150157b9615d373100af76633e7ef0dc1c10069421c959bb42/pybiopax-0.0.3-py3-none-any.whl#sha256=c14fb48e23558e3b38263250295618e7110dd6361c7f87b1f24ab31a406ef094 (from https://pypi.org/simple/pybiopax/) 2020-07-16T05:29:19,659 Found link https://files.pythonhosted.org/packages/d4/d4/d87f2377d8eb1ce4e3c84c426e3a19cd85c94c2425c5c04184f7baab2e7a/pybiopax-0.0.3.tar.gz#sha256=850d0ddf689eab3f5463cabfc3335e0d3178eb687c998b85b9b0ceeacd93bb65 (from https://pypi.org/simple/pybiopax/), version: 0.0.3 2020-07-16T05:29:19,668 Given no hashes to check 1 links for project 'pybiopax': discarding no candidates 2020-07-16T05:29:19,669 Using version 0.0.3 (newest of versions: 0.0.3) 2020-07-16T05:29:19,675 Collecting pybiopax==0.0.3 2020-07-16T05:29:19,679 Created temporary directory: /tmp/pip-unpack-3o8899th 2020-07-16T05:29:20,033 Downloading pybiopax-0.0.3.tar.gz (3.5 MB) 2020-07-16T05:29:23,264 Added pybiopax==0.0.3 from https://files.pythonhosted.org/packages/d4/d4/d87f2377d8eb1ce4e3c84c426e3a19cd85c94c2425c5c04184f7baab2e7a/pybiopax-0.0.3.tar.gz#sha256=850d0ddf689eab3f5463cabfc3335e0d3178eb687c998b85b9b0ceeacd93bb65 to build tracker '/tmp/pip-req-tracker-ipumilez' 2020-07-16T05:29:23,265 Running setup.py (path:/tmp/pip-wheel-b5elhuhq/pybiopax/setup.py) egg_info for package pybiopax 2020-07-16T05:29:23,267 Created temporary directory: /tmp/pip-pip-egg-info-qlzld3ts 2020-07-16T05:29:23,267 Running command python setup.py egg_info 2020-07-16T05:29:25,315 running egg_info 2020-07-16T05:29:25,323 creating /tmp/pip-pip-egg-info-qlzld3ts/pybiopax.egg-info 2020-07-16T05:29:25,326 writing requirements to /tmp/pip-pip-egg-info-qlzld3ts/pybiopax.egg-info/requires.txt 2020-07-16T05:29:25,328 writing top-level names to /tmp/pip-pip-egg-info-qlzld3ts/pybiopax.egg-info/top_level.txt 2020-07-16T05:29:25,330 writing dependency_links to /tmp/pip-pip-egg-info-qlzld3ts/pybiopax.egg-info/dependency_links.txt 2020-07-16T05:29:25,332 writing /tmp/pip-pip-egg-info-qlzld3ts/pybiopax.egg-info/PKG-INFO 2020-07-16T05:29:25,337 writing manifest file '/tmp/pip-pip-egg-info-qlzld3ts/pybiopax.egg-info/SOURCES.txt' 2020-07-16T05:29:25,659 reading manifest file '/tmp/pip-pip-egg-info-qlzld3ts/pybiopax.egg-info/SOURCES.txt' 2020-07-16T05:29:25,662 reading manifest template 'MANIFEST.in' 2020-07-16T05:29:25,666 warning: no files found matching 'pybiopax/tests/phosphorylation_test.owl' 2020-07-16T05:29:25,672 writing manifest file '/tmp/pip-pip-egg-info-qlzld3ts/pybiopax.egg-info/SOURCES.txt' 2020-07-16T05:29:25,811 Source in /tmp/pip-wheel-b5elhuhq/pybiopax has version 0.0.3, which satisfies requirement pybiopax==0.0.3 from https://files.pythonhosted.org/packages/d4/d4/d87f2377d8eb1ce4e3c84c426e3a19cd85c94c2425c5c04184f7baab2e7a/pybiopax-0.0.3.tar.gz#sha256=850d0ddf689eab3f5463cabfc3335e0d3178eb687c998b85b9b0ceeacd93bb65 2020-07-16T05:29:25,813 Removed pybiopax==0.0.3 from https://files.pythonhosted.org/packages/d4/d4/d87f2377d8eb1ce4e3c84c426e3a19cd85c94c2425c5c04184f7baab2e7a/pybiopax-0.0.3.tar.gz#sha256=850d0ddf689eab3f5463cabfc3335e0d3178eb687c998b85b9b0ceeacd93bb65 from build tracker '/tmp/pip-req-tracker-ipumilez' 2020-07-16T05:29:25,818 Building wheels for collected packages: pybiopax 2020-07-16T05:29:25,825 Created temporary directory: /tmp/pip-wheel-o1h39btw 2020-07-16T05:29:25,825 Building wheel for pybiopax (setup.py): started 2020-07-16T05:29:25,826 Destination directory: /tmp/pip-wheel-o1h39btw 2020-07-16T05:29:25,827 Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-b5elhuhq/pybiopax/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-b5elhuhq/pybiopax/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-o1h39btw 2020-07-16T05:29:27,868 running bdist_wheel 2020-07-16T05:29:27,881 running build 2020-07-16T05:29:27,882 running build_py 2020-07-16T05:29:28,189 creating build 2020-07-16T05:29:28,190 creating build/lib 2020-07-16T05:29:28,191 creating build/lib/pybiopax 2020-07-16T05:29:28,193 copying pybiopax/api.py -> build/lib/pybiopax 2020-07-16T05:29:28,196 copying pybiopax/pc_client.py -> build/lib/pybiopax 2020-07-16T05:29:28,199 copying pybiopax/__init__.py -> build/lib/pybiopax 2020-07-16T05:29:28,202 copying pybiopax/xml_util.py -> build/lib/pybiopax 2020-07-16T05:29:28,206 creating build/lib/pybiopax/tests 2020-07-16T05:29:28,207 copying pybiopax/tests/__init__.py -> build/lib/pybiopax/tests 2020-07-16T05:29:28,210 copying pybiopax/tests/test_biopax.py -> build/lib/pybiopax/tests 2020-07-16T05:29:28,214 creating build/lib/pybiopax/biopax 2020-07-16T05:29:28,215 copying pybiopax/biopax/base.py -> build/lib/pybiopax/biopax 2020-07-16T05:29:28,219 copying pybiopax/biopax/interaction.py -> build/lib/pybiopax/biopax 2020-07-16T05:29:28,222 copying pybiopax/biopax/util.py -> build/lib/pybiopax/biopax 2020-07-16T05:29:28,226 copying pybiopax/biopax/__init__.py -> build/lib/pybiopax/biopax 2020-07-16T05:29:28,228 copying pybiopax/biopax/model.py -> build/lib/pybiopax/biopax 2020-07-16T05:29:28,231 copying pybiopax/biopax/physical_entity.py -> build/lib/pybiopax/biopax 2020-07-16T05:29:28,243 installing to build/bdist.linux-armv7l/wheel 2020-07-16T05:29:28,244 running install 2020-07-16T05:29:28,246 running install_lib 2020-07-16T05:29:28,252 creating build/bdist.linux-armv7l 2020-07-16T05:29:28,253 creating build/bdist.linux-armv7l/wheel 2020-07-16T05:29:28,256 creating build/bdist.linux-armv7l/wheel/pybiopax 2020-07-16T05:29:28,257 copying build/lib/pybiopax/api.py -> build/bdist.linux-armv7l/wheel/pybiopax 2020-07-16T05:29:28,261 creating build/bdist.linux-armv7l/wheel/pybiopax/tests 2020-07-16T05:29:28,263 copying build/lib/pybiopax/tests/__init__.py -> build/bdist.linux-armv7l/wheel/pybiopax/tests 2020-07-16T05:29:28,266 copying build/lib/pybiopax/tests/test_biopax.py -> build/bdist.linux-armv7l/wheel/pybiopax/tests 2020-07-16T05:29:28,268 copying build/lib/pybiopax/pc_client.py -> build/bdist.linux-armv7l/wheel/pybiopax 2020-07-16T05:29:28,272 copying build/lib/pybiopax/__init__.py -> build/bdist.linux-armv7l/wheel/pybiopax 2020-07-16T05:29:28,275 copying build/lib/pybiopax/xml_util.py -> build/bdist.linux-armv7l/wheel/pybiopax 2020-07-16T05:29:28,279 creating build/bdist.linux-armv7l/wheel/pybiopax/biopax 2020-07-16T05:29:28,280 copying build/lib/pybiopax/biopax/base.py -> build/bdist.linux-armv7l/wheel/pybiopax/biopax 2020-07-16T05:29:28,284 copying build/lib/pybiopax/biopax/interaction.py -> build/bdist.linux-armv7l/wheel/pybiopax/biopax 2020-07-16T05:29:28,288 copying build/lib/pybiopax/biopax/util.py -> build/bdist.linux-armv7l/wheel/pybiopax/biopax 2020-07-16T05:29:28,299 copying build/lib/pybiopax/biopax/__init__.py -> build/bdist.linux-armv7l/wheel/pybiopax/biopax 2020-07-16T05:29:28,301 copying build/lib/pybiopax/biopax/model.py -> build/bdist.linux-armv7l/wheel/pybiopax/biopax 2020-07-16T05:29:28,305 copying build/lib/pybiopax/biopax/physical_entity.py -> build/bdist.linux-armv7l/wheel/pybiopax/biopax 2020-07-16T05:29:28,308 running install_egg_info 2020-07-16T05:29:28,349 running egg_info 2020-07-16T05:29:28,351 writing requirements to pybiopax.egg-info/requires.txt 2020-07-16T05:29:28,353 writing dependency_links to pybiopax.egg-info/dependency_links.txt 2020-07-16T05:29:28,355 writing pybiopax.egg-info/PKG-INFO 2020-07-16T05:29:28,359 writing top-level names to pybiopax.egg-info/top_level.txt 2020-07-16T05:29:28,367 reading manifest file 'pybiopax.egg-info/SOURCES.txt' 2020-07-16T05:29:28,371 reading manifest template 'MANIFEST.in' 2020-07-16T05:29:28,375 warning: no files found matching 'pybiopax/tests/phosphorylation_test.owl' 2020-07-16T05:29:28,382 writing manifest file 'pybiopax.egg-info/SOURCES.txt' 2020-07-16T05:29:28,384 Copying pybiopax.egg-info to build/bdist.linux-armv7l/wheel/pybiopax-0.0.3-py3.5.egg-info 2020-07-16T05:29:28,401 running install_scripts 2020-07-16T05:29:28,562 creating build/bdist.linux-armv7l/wheel/pybiopax-0.0.3.dist-info/WHEEL 2020-07-16T05:29:28,790 Building wheel for pybiopax (setup.py): finished with status 'done' 2020-07-16T05:29:28,794 Created wheel for pybiopax: filename=pybiopax-0.0.3-py3-none-any.whl size=16809 sha256=e1a1121b91ba8e68c0a7492a1826eeab89766043c9f98ad1891fcde36b33d241 2020-07-16T05:29:28,794 Stored in directory: /tmp/pip-ephem-wheel-cache-ukq5afsw/wheels/03/69/19/6d84036c7a2e353283e4c5e2f640a8279ce87de9a69bc83e31 2020-07-16T05:29:28,798 Successfully built pybiopax 2020-07-16T05:29:28,804 Removed build tracker: '/tmp/pip-req-tracker-ipumilez'