2020-07-16T15:28:50,070 Created temporary directory: /tmp/pip-ephem-wheel-cache-xzri9xwv 2020-07-16T15:28:50,074 Created temporary directory: /tmp/pip-req-tracker-4wj38oq7 2020-07-16T15:28:50,075 Initialized build tracking at /tmp/pip-req-tracker-4wj38oq7 2020-07-16T15:28:50,075 Created build tracker: /tmp/pip-req-tracker-4wj38oq7 2020-07-16T15:28:50,076 Entered build tracker: /tmp/pip-req-tracker-4wj38oq7 2020-07-16T15:28:50,077 Created temporary directory: /tmp/pip-wheel-ywym4589 2020-07-16T15:28:50,094 1 location(s) to search for versions of pybiopax: 2020-07-16T15:28:50,094 * https://pypi.org/simple/pybiopax/ 2020-07-16T15:28:50,095 Fetching project page and analyzing links: https://pypi.org/simple/pybiopax/ 2020-07-16T15:28:50,095 Getting page https://pypi.org/simple/pybiopax/ 2020-07-16T15:28:50,098 Found index url https://pypi.org/simple 2020-07-16T15:28:50,305 Skipping link: No binaries permitted for pybiopax: https://files.pythonhosted.org/packages/c7/88/02957c31f6e5a3eec52931572d0d8a1a8b79ccba35528ac1d833b67903ed/pybiopax-0.0.1-py3-none-any.whl#sha256=8a2bf2a324a782e0ab5adc5c841746d918d023ba07761260e1208e30af645ca4 (from https://pypi.org/simple/pybiopax/) 2020-07-16T15:28:50,306 Found link https://files.pythonhosted.org/packages/f9/ce/534092d6719b240fa618bd7f109330476855e0a87579c0629fe65cfc2aa6/pybiopax-0.0.1.tar.gz#sha256=fc555ecb9fe4d94340ba66355704d57b618efed91419d93d79fc65a04dc07103 (from https://pypi.org/simple/pybiopax/), version: 0.0.1 2020-07-16T15:28:50,307 Skipping link: No binaries permitted for pybiopax: https://files.pythonhosted.org/packages/c9/3f/2fb307100ca7aff02d37593ce39d8020c019d7e4181a7af7677e7c8aa1aa/pybiopax-0.0.2-py3-none-any.whl#sha256=4dbcd1fbf6e4a4924245116039015556a3097d20e355f8a1c9850f20b38c06f0 (from https://pypi.org/simple/pybiopax/) 2020-07-16T15:28:50,307 Found link https://files.pythonhosted.org/packages/44/0c/377ce9e04018c10bad47ab8d4f08ef903004f5a129861371ad2e953de022/pybiopax-0.0.2.tar.gz#sha256=344c400c88e00cb09289aeeb3333083772cf7650501ac572f2cf9222b95cf872 (from https://pypi.org/simple/pybiopax/), version: 0.0.2 2020-07-16T15:28:50,308 Skipping link: No binaries permitted for pybiopax: https://files.pythonhosted.org/packages/e7/d6/85ba100b73150157b9615d373100af76633e7ef0dc1c10069421c959bb42/pybiopax-0.0.3-py3-none-any.whl#sha256=c14fb48e23558e3b38263250295618e7110dd6361c7f87b1f24ab31a406ef094 (from https://pypi.org/simple/pybiopax/) 2020-07-16T15:28:50,308 Found link https://files.pythonhosted.org/packages/d4/d4/d87f2377d8eb1ce4e3c84c426e3a19cd85c94c2425c5c04184f7baab2e7a/pybiopax-0.0.3.tar.gz#sha256=850d0ddf689eab3f5463cabfc3335e0d3178eb687c998b85b9b0ceeacd93bb65 (from https://pypi.org/simple/pybiopax/), version: 0.0.3 2020-07-16T15:28:50,309 Skipping link: No binaries permitted for pybiopax: https://files.pythonhosted.org/packages/8e/03/6f61cf56f432ccda9265c3b92a6161789c3ca589f551d08fec566a949c1b/pybiopax-0.0.4-py3-none-any.whl#sha256=10696dea703d4572d80423aed60fd0ba8cfdd993fb68a6135324210b21010765 (from https://pypi.org/simple/pybiopax/) 2020-07-16T15:28:50,309 Found link https://files.pythonhosted.org/packages/22/aa/3ed501611db9593f4cdd277f0041f1c50848b75a039650e532900b89e771/pybiopax-0.0.4.tar.gz#sha256=ccd373d522dabf465bf5a7cb110ca1140d899456696b48f7b28e7caa9c993229 (from https://pypi.org/simple/pybiopax/), version: 0.0.4 2020-07-16T15:28:50,318 Given no hashes to check 1 links for project 'pybiopax': discarding no candidates 2020-07-16T15:28:50,319 Using version 0.0.4 (newest of versions: 0.0.4) 2020-07-16T15:28:50,324 Collecting pybiopax==0.0.4 2020-07-16T15:28:50,328 Created temporary directory: /tmp/pip-unpack-_nde8fag 2020-07-16T15:28:50,665 Downloading pybiopax-0.0.4.tar.gz (3.5 MB) 2020-07-16T15:28:55,181 Added pybiopax==0.0.4 from https://files.pythonhosted.org/packages/22/aa/3ed501611db9593f4cdd277f0041f1c50848b75a039650e532900b89e771/pybiopax-0.0.4.tar.gz#sha256=ccd373d522dabf465bf5a7cb110ca1140d899456696b48f7b28e7caa9c993229 to build tracker '/tmp/pip-req-tracker-4wj38oq7' 2020-07-16T15:28:55,183 Running setup.py (path:/tmp/pip-wheel-ywym4589/pybiopax/setup.py) egg_info for package pybiopax 2020-07-16T15:28:55,185 Created temporary directory: /tmp/pip-pip-egg-info-49b10rb1 2020-07-16T15:28:55,186 Running command python setup.py egg_info 2020-07-16T15:28:57,221 running egg_info 2020-07-16T15:28:57,226 creating /tmp/pip-pip-egg-info-49b10rb1/pybiopax.egg-info 2020-07-16T15:28:57,244 writing /tmp/pip-pip-egg-info-49b10rb1/pybiopax.egg-info/PKG-INFO 2020-07-16T15:28:57,250 writing dependency_links to /tmp/pip-pip-egg-info-49b10rb1/pybiopax.egg-info/dependency_links.txt 2020-07-16T15:28:57,255 writing requirements to /tmp/pip-pip-egg-info-49b10rb1/pybiopax.egg-info/requires.txt 2020-07-16T15:28:57,258 writing top-level names to /tmp/pip-pip-egg-info-49b10rb1/pybiopax.egg-info/top_level.txt 2020-07-16T15:28:57,262 writing manifest file '/tmp/pip-pip-egg-info-49b10rb1/pybiopax.egg-info/SOURCES.txt' 2020-07-16T15:28:57,553 reading manifest file '/tmp/pip-pip-egg-info-49b10rb1/pybiopax.egg-info/SOURCES.txt' 2020-07-16T15:28:57,557 reading manifest template 'MANIFEST.in' 2020-07-16T15:28:57,563 warning: no files found matching 'pybiopax/tests/phosphorylation_test.owl' 2020-07-16T15:28:57,569 writing manifest file '/tmp/pip-pip-egg-info-49b10rb1/pybiopax.egg-info/SOURCES.txt' 2020-07-16T15:28:57,693 Source in /tmp/pip-wheel-ywym4589/pybiopax has version 0.0.4, which satisfies requirement pybiopax==0.0.4 from https://files.pythonhosted.org/packages/22/aa/3ed501611db9593f4cdd277f0041f1c50848b75a039650e532900b89e771/pybiopax-0.0.4.tar.gz#sha256=ccd373d522dabf465bf5a7cb110ca1140d899456696b48f7b28e7caa9c993229 2020-07-16T15:28:57,695 Removed pybiopax==0.0.4 from https://files.pythonhosted.org/packages/22/aa/3ed501611db9593f4cdd277f0041f1c50848b75a039650e532900b89e771/pybiopax-0.0.4.tar.gz#sha256=ccd373d522dabf465bf5a7cb110ca1140d899456696b48f7b28e7caa9c993229 from build tracker '/tmp/pip-req-tracker-4wj38oq7' 2020-07-16T15:28:57,699 Building wheels for collected packages: pybiopax 2020-07-16T15:28:57,708 Created temporary directory: /tmp/pip-wheel-pl4g7i5k 2020-07-16T15:28:57,708 Building wheel for pybiopax (setup.py): started 2020-07-16T15:28:57,709 Destination directory: /tmp/pip-wheel-pl4g7i5k 2020-07-16T15:28:57,709 Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-ywym4589/pybiopax/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-ywym4589/pybiopax/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-pl4g7i5k 2020-07-16T15:28:59,688 running bdist_wheel 2020-07-16T15:28:59,703 running build 2020-07-16T15:28:59,703 running build_py 2020-07-16T15:28:59,977 creating build 2020-07-16T15:28:59,978 creating build/lib 2020-07-16T15:28:59,979 creating build/lib/pybiopax 2020-07-16T15:28:59,982 copying pybiopax/__init__.py -> build/lib/pybiopax 2020-07-16T15:28:59,986 copying pybiopax/pc_client.py -> build/lib/pybiopax 2020-07-16T15:28:59,990 copying pybiopax/api.py -> build/lib/pybiopax 2020-07-16T15:28:59,994 copying pybiopax/xml_util.py -> build/lib/pybiopax 2020-07-16T15:28:59,999 creating build/lib/pybiopax/tests 2020-07-16T15:29:00,001 copying pybiopax/tests/__init__.py -> build/lib/pybiopax/tests 2020-07-16T15:29:00,005 copying pybiopax/tests/test_biopax.py -> build/lib/pybiopax/tests 2020-07-16T15:29:00,010 creating build/lib/pybiopax/biopax 2020-07-16T15:29:00,012 copying pybiopax/biopax/util.py -> build/lib/pybiopax/biopax 2020-07-16T15:29:00,020 copying pybiopax/biopax/__init__.py -> build/lib/pybiopax/biopax 2020-07-16T15:29:00,024 copying pybiopax/biopax/base.py -> build/lib/pybiopax/biopax 2020-07-16T15:29:00,030 copying pybiopax/biopax/model.py -> build/lib/pybiopax/biopax 2020-07-16T15:29:00,036 copying pybiopax/biopax/physical_entity.py -> build/lib/pybiopax/biopax 2020-07-16T15:29:00,041 copying pybiopax/biopax/interaction.py -> build/lib/pybiopax/biopax 2020-07-16T15:29:00,058 installing to build/bdist.linux-armv7l/wheel 2020-07-16T15:29:00,058 running install 2020-07-16T15:29:00,060 running install_lib 2020-07-16T15:29:00,068 creating build/bdist.linux-armv7l 2020-07-16T15:29:00,068 creating build/bdist.linux-armv7l/wheel 2020-07-16T15:29:00,072 creating build/bdist.linux-armv7l/wheel/pybiopax 2020-07-16T15:29:00,074 copying build/lib/pybiopax/__init__.py -> build/bdist.linux-armv7l/wheel/pybiopax 2020-07-16T15:29:00,078 copying build/lib/pybiopax/pc_client.py -> build/bdist.linux-armv7l/wheel/pybiopax 2020-07-16T15:29:00,084 creating build/bdist.linux-armv7l/wheel/pybiopax/tests 2020-07-16T15:29:00,085 copying build/lib/pybiopax/tests/__init__.py -> build/bdist.linux-armv7l/wheel/pybiopax/tests 2020-07-16T15:29:00,089 copying build/lib/pybiopax/tests/test_biopax.py -> build/bdist.linux-armv7l/wheel/pybiopax/tests 2020-07-16T15:29:00,094 copying build/lib/pybiopax/api.py -> build/bdist.linux-armv7l/wheel/pybiopax 2020-07-16T15:29:00,100 copying build/lib/pybiopax/xml_util.py -> build/bdist.linux-armv7l/wheel/pybiopax 2020-07-16T15:29:00,107 creating build/bdist.linux-armv7l/wheel/pybiopax/biopax 2020-07-16T15:29:00,109 copying build/lib/pybiopax/biopax/util.py -> build/bdist.linux-armv7l/wheel/pybiopax/biopax 2020-07-16T15:29:00,117 copying build/lib/pybiopax/biopax/__init__.py -> build/bdist.linux-armv7l/wheel/pybiopax/biopax 2020-07-16T15:29:00,122 copying build/lib/pybiopax/biopax/base.py -> build/bdist.linux-armv7l/wheel/pybiopax/biopax 2020-07-16T15:29:00,128 copying build/lib/pybiopax/biopax/model.py -> build/bdist.linux-armv7l/wheel/pybiopax/biopax 2020-07-16T15:29:00,134 copying build/lib/pybiopax/biopax/physical_entity.py -> build/bdist.linux-armv7l/wheel/pybiopax/biopax 2020-07-16T15:29:00,139 copying build/lib/pybiopax/biopax/interaction.py -> build/bdist.linux-armv7l/wheel/pybiopax/biopax 2020-07-16T15:29:00,144 running install_egg_info 2020-07-16T15:29:00,186 running egg_info 2020-07-16T15:29:00,199 writing pybiopax.egg-info/PKG-INFO 2020-07-16T15:29:00,204 writing dependency_links to pybiopax.egg-info/dependency_links.txt 2020-07-16T15:29:00,208 writing requirements to pybiopax.egg-info/requires.txt 2020-07-16T15:29:00,210 writing top-level names to pybiopax.egg-info/top_level.txt 2020-07-16T15:29:00,222 reading manifest file 'pybiopax.egg-info/SOURCES.txt' 2020-07-16T15:29:00,226 reading manifest template 'MANIFEST.in' 2020-07-16T15:29:00,230 warning: no files found matching 'pybiopax/tests/phosphorylation_test.owl' 2020-07-16T15:29:00,236 writing manifest file 'pybiopax.egg-info/SOURCES.txt' 2020-07-16T15:29:00,239 Copying pybiopax.egg-info to build/bdist.linux-armv7l/wheel/pybiopax-0.0.4-py3.7.egg-info 2020-07-16T15:29:00,266 running install_scripts 2020-07-16T15:29:00,414 adding license file "LICENSE" (matched pattern "LICEN[CS]E*") 2020-07-16T15:29:00,425 creating build/bdist.linux-armv7l/wheel/pybiopax-0.0.4.dist-info/WHEEL 2020-07-16T15:29:00,430 creating '/tmp/pip-wheel-pl4g7i5k/pybiopax-0.0.4-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2020-07-16T15:29:00,435 adding 'pybiopax/__init__.py' 2020-07-16T15:29:00,437 adding 'pybiopax/api.py' 2020-07-16T15:29:00,440 adding 'pybiopax/pc_client.py' 2020-07-16T15:29:00,443 adding 'pybiopax/xml_util.py' 2020-07-16T15:29:00,447 adding 'pybiopax/biopax/__init__.py' 2020-07-16T15:29:00,450 adding 'pybiopax/biopax/base.py' 2020-07-16T15:29:00,452 adding 'pybiopax/biopax/interaction.py' 2020-07-16T15:29:00,455 adding 'pybiopax/biopax/model.py' 2020-07-16T15:29:00,458 adding 'pybiopax/biopax/physical_entity.py' 2020-07-16T15:29:00,461 adding 'pybiopax/biopax/util.py' 2020-07-16T15:29:00,465 adding 'pybiopax/tests/__init__.py' 2020-07-16T15:29:00,467 adding 'pybiopax/tests/test_biopax.py' 2020-07-16T15:29:00,472 adding 'pybiopax-0.0.4.dist-info/LICENSE' 2020-07-16T15:29:00,475 adding 'pybiopax-0.0.4.dist-info/METADATA' 2020-07-16T15:29:00,477 adding 'pybiopax-0.0.4.dist-info/WHEEL' 2020-07-16T15:29:00,478 adding 'pybiopax-0.0.4.dist-info/top_level.txt' 2020-07-16T15:29:00,480 adding 'pybiopax-0.0.4.dist-info/RECORD' 2020-07-16T15:29:00,483 removing build/bdist.linux-armv7l/wheel 2020-07-16T15:29:00,630 Building wheel for pybiopax (setup.py): finished with status 'done' 2020-07-16T15:29:00,634 Created wheel for pybiopax: filename=pybiopax-0.0.4-py3-none-any.whl size=15682 sha256=006600ae929ce920fc585010e62904f512bab34379ca9a736742dd4987d00001 2020-07-16T15:29:00,635 Stored in directory: /tmp/pip-ephem-wheel-cache-xzri9xwv/wheels/8a/e1/ef/fe9cd95cca873a3502ad59003561aff3ec8e3144584c225cd6 2020-07-16T15:29:00,639 Successfully built pybiopax 2020-07-16T15:29:00,649 Removed build tracker: '/tmp/pip-req-tracker-4wj38oq7'