2020-07-18T07:27:42,967 Created temporary directory: /tmp/pip-ephem-wheel-cache-f4wqxyie
2020-07-18T07:27:42,971 Created temporary directory: /tmp/pip-req-tracker-zo7oaf8c
2020-07-18T07:27:42,972 Initialized build tracking at /tmp/pip-req-tracker-zo7oaf8c
2020-07-18T07:27:42,972 Created build tracker: /tmp/pip-req-tracker-zo7oaf8c
2020-07-18T07:27:42,973 Entered build tracker: /tmp/pip-req-tracker-zo7oaf8c
2020-07-18T07:27:42,974 Created temporary directory: /tmp/pip-wheel-cft09785
2020-07-18T07:27:42,991 1 location(s) to search for versions of gtdbtk:
2020-07-18T07:27:42,991 * https://pypi.org/simple/gtdbtk/
2020-07-18T07:27:42,991 Fetching project page and analyzing links: https://pypi.org/simple/gtdbtk/
2020-07-18T07:27:42,992 Getting page https://pypi.org/simple/gtdbtk/
2020-07-18T07:27:42,995 Found index url https://pypi.org/simple
2020-07-18T07:27:43,225   Found link https://files.pythonhosted.org/packages/77/1d/a47e727062761ea6108b1be340d24c711131df11415d82cdb30bcb51738b/gtdbtk-0.0.1.tar.gz#sha256=3f9a367bf64dc907226c2ac5f39204080fa5f305a995dcfa183ec0da6f4187a8 (from https://pypi.org/simple/gtdbtk/), version: 0.0.1
2020-07-18T07:27:43,226   Found link https://files.pythonhosted.org/packages/78/fc/021b3e4fc9fc1a8d8596ccf703ee4f5abd97b496bc714a9bfc69332e913e/gtdbtk-0.0.2.tar.gz#sha256=b350aa8766a772509197a361646104b17dd106cf834fb9ea517c1924f5a8d345 (from https://pypi.org/simple/gtdbtk/), version: 0.0.2
2020-07-18T07:27:43,227   Found link https://files.pythonhosted.org/packages/b8/55/a62d05d6a2d35a6e9f2247586a77f8033eaeeffb8e8d4db6511252c8a59b/gtdbtk-0.0.3.tar.gz#sha256=55d6be274b732fa9bda5682892900ad0edc06a32f44db1fd5990910c206692b8 (from https://pypi.org/simple/gtdbtk/), version: 0.0.3
2020-07-18T07:27:43,227   Found link https://files.pythonhosted.org/packages/88/3d/2dedbfdce682d2c73aebb1182835889222aecefac4072e205e885b601be5/gtdbtk-0.0.4b0.tar.gz#sha256=39e82b23287c42e89b097b7aa163425a46b8616f2ec356d6b9fa5b1dccd85984 (from https://pypi.org/simple/gtdbtk/), version: 0.0.4b0
2020-07-18T07:27:43,228   Found link https://files.pythonhosted.org/packages/e7/21/7b30d68267c9ed81610a37c8fdac4b53f7090f9511d963a54754ec49d521/gtdbtk-0.0.4b1.tar.gz#sha256=eb4de226ccd8f266cc31fe11f2df8d8582cfd7164d7b3b4bf08cf97e0acf5004 (from https://pypi.org/simple/gtdbtk/), version: 0.0.4b1
2020-07-18T07:27:43,229   Found link https://files.pythonhosted.org/packages/d1/f0/970559d46438a2004ccaa4199491188afc1bb13304fb899b26a3530ed841/gtdbtk-0.0.4b2.tar.gz#sha256=a92edcfd6f7e15b3aad5154d10f08798417d49df4634b7e9165c0e0fe55f35f0 (from https://pypi.org/simple/gtdbtk/), version: 0.0.4b2
2020-07-18T07:27:43,229   Found link https://files.pythonhosted.org/packages/e0/47/a9610df19e2bcf2782fc1ee29e5f85452b20a22d6f80581a23e3c0111c52/gtdbtk-0.0.4b3.tar.gz#sha256=c98f0847a434e9f88cfaaa33b11b99f97123e6982a59d90a7291370f3cc2cc46 (from https://pypi.org/simple/gtdbtk/), version: 0.0.4b3
2020-07-18T07:27:43,230   Found link https://files.pythonhosted.org/packages/bf/f1/ebd7ba5d9ac68fc00ec0f7a69b52111d945a70f836dd4ba975600b088a98/gtdbtk-0.0.5.tar.gz#sha256=116c8aff980e2af0d18cf79a5ce452cb78cee11c226425554c9b6f2b2969ec27 (from https://pypi.org/simple/gtdbtk/), version: 0.0.5
2020-07-18T07:27:43,231   Found link https://files.pythonhosted.org/packages/ca/7c/fc51570da6722bd31e310bb1ac218cb9d839dfae5d5e94d0ea3666402812/gtdbtk-0.0.6.tar.gz#sha256=e83a8ec329637753a4f7fc4672ae89442aa464a7daba55067cbf05ff195ae8c9 (from https://pypi.org/simple/gtdbtk/), version: 0.0.6
2020-07-18T07:27:43,231   Found link https://files.pythonhosted.org/packages/68/72/fdfc81336d6a94e8f286f562bc265e5d215f653f5d08d91689b6cb69a6cb/gtdbtk-0.0.7.tar.gz#sha256=6fa59cd7cb19aee52b82b179bb6efa7ba00a22b9c2317f9d01837e1e35d4a1e0 (from https://pypi.org/simple/gtdbtk/), version: 0.0.7
2020-07-18T07:27:43,232   Found link https://files.pythonhosted.org/packages/00/bb/2c2c4a00d4ca637be0daa7ac6bca99011afa8c42de7148c4e5dd6fc28141/gtdbtk-0.0.8b1.tar.gz#sha256=09183582b140dd0f40bda9db70e1f49347934c61cc2deab7214a183b915a0057 (from https://pypi.org/simple/gtdbtk/), version: 0.0.8b1
2020-07-18T07:27:43,232   Found link https://files.pythonhosted.org/packages/c0/3e/4a7f207340198fb69fe0764236f9cfb562840796cca457317024f1bcfb65/gtdbtk-0.1.0.tar.gz#sha256=4970c3a740f9d40142b81104ededd65cf109b57b11ab6ca66b6b21ed0ea40307 (from https://pypi.org/simple/gtdbtk/), version: 0.1.0
2020-07-18T07:27:43,233   Found link https://files.pythonhosted.org/packages/5f/c1/f028b36863e2b27d0a4191f4033eec25cfff898abceb97b0ccfa1352e1f0/gtdbtk-0.1.1.tar.gz#sha256=acfaed6f97b88b5a4cc327f956d408f6a0f8b49c0088f6222f992e179c1a8b89 (from https://pypi.org/simple/gtdbtk/), version: 0.1.1
2020-07-18T07:27:43,234   Found link https://files.pythonhosted.org/packages/1f/40/6a7cae5b58902ff5add1db17bf0dd24857bfedacd73f47096e3ef5789899/gtdbtk-0.1.2.tar.gz#sha256=2702d6b289e93ef725d01b6fe13d55abbe00711cb6704de8b2ad20604d8d2267 (from https://pypi.org/simple/gtdbtk/), version: 0.1.2
2020-07-18T07:27:43,235   Found link https://files.pythonhosted.org/packages/e4/e7/481464381afdf57da5e920a1713a73627373583c57d292ad7155e8b4f32c/gtdbtk-0.1.3.tar.gz#sha256=1063a8cdb0f72164fbba0f41e3df12ab23e944b0b15fc9e264bb0a2903b8978e (from https://pypi.org/simple/gtdbtk/), version: 0.1.3
2020-07-18T07:27:43,235   Found link https://files.pythonhosted.org/packages/29/6d/e9dc39898e8cc79fe54b5109ca7ed03842bcab51368cc6dbf05c2b2c6f39/gtdbtk-0.1.6.tar.gz#sha256=d30abfb59a1d9180bdbdb6d07d26b0baaa6fdf70f5ef08576bf284854cf3b262 (from https://pypi.org/simple/gtdbtk/), version: 0.1.6
2020-07-18T07:27:43,236   Found link https://files.pythonhosted.org/packages/db/c8/b052434152065efc0d209401041a7f7ba51c153832f4fe0a424fe0990cfa/gtdbtk-0.2.1.tar.gz#sha256=043118d31a94902eed5d623cc94ed3eb941c397411084d3909e3b504e0d1c4ca (from https://pypi.org/simple/gtdbtk/), version: 0.2.1
2020-07-18T07:27:43,237   Found link https://files.pythonhosted.org/packages/0a/74/8cbe8afea3aa0f7d6b948210b8937f3edcf541b3212cae2ce6aa560276a9/gtdbtk-0.2.2.tar.gz#sha256=23f6dd77e0102cfbc88d0e1c1cc4ba61a1df64ec71848a160ac4d9b5d2e81d1d (from https://pypi.org/simple/gtdbtk/), version: 0.2.2
2020-07-18T07:27:43,237   Found link https://files.pythonhosted.org/packages/45/de/019db6634299b4086a49646891c9e99347e2908713baa14641e15687e4af/gtdbtk-0.3.0.tar.gz#sha256=1048113616b37e30201b6b85cb80bdd952644c6c42240f4f876f6249cff9c41c (from https://pypi.org/simple/gtdbtk/), version: 0.3.0
2020-07-18T07:27:43,238   Found link https://files.pythonhosted.org/packages/6e/46/14181ed7f443fd8f70353250d09c94d2a2d867e68cc687167a8546ef4926/gtdbtk-0.3.1.tar.gz#sha256=ac6329774211953e431b449788ac0bfbf16a6485eb33b4d4559e84a7cc080bda (from https://pypi.org/simple/gtdbtk/), version: 0.3.1
2020-07-18T07:27:43,239   Found link https://files.pythonhosted.org/packages/91/64/06be7ada30b1895a1205feac310a92929a5e135b5821036632aa36d1354c/gtdbtk-0.3.2.tar.gz#sha256=8df3b941df5aa1a4bd0e0344da179d73f756a20b5f28610f3837efacbb019f4a (from https://pypi.org/simple/gtdbtk/), version: 0.3.2
2020-07-18T07:27:43,239   Found link https://files.pythonhosted.org/packages/7d/90/a62620e2c5c5799d0271f097a83c356dd7d458bf85651da24a353e93d669/gtdbtk-0.3.3.tar.gz#sha256=32283b128e438fa7924b302d8189c61656ac5cefcfa49269d0eade997034015a (from https://pypi.org/simple/gtdbtk/), version: 0.3.3
2020-07-18T07:27:43,240   Found link https://files.pythonhosted.org/packages/48/b3/ce025d246df8196fbb18ac4ef9b3f09b430d8a71627b3b49dd7f33647b95/gtdbtk-1.0.0.tar.gz#sha256=e6e13437d76d6e3ac48b5860790f74a3394b13392c099b98c05fa1b2473697d6 (from https://pypi.org/simple/gtdbtk/) (requires-python:>=3.6), version: 1.0.0
2020-07-18T07:27:43,241   Found link https://files.pythonhosted.org/packages/87/bc/dcfb65d65adda7952adf9251cb7e86c2cc3143804932d2a6cbdc04f4249e/gtdbtk-1.0.1.tar.gz#sha256=5f849a4f53db03fcffe832ee82b3816c3aca0c69e2dc16733608bdd1ca1781f0 (from https://pypi.org/simple/gtdbtk/) (requires-python:>=3.6), version: 1.0.1
2020-07-18T07:27:43,242   Found link https://files.pythonhosted.org/packages/cd/3b/c70443baef1058d1955bfe476d521a4ad423958bf349527cf75cb3e892a5/gtdbtk-1.0.2.tar.gz#sha256=b8fb65555d86301c55bef0f4722f6ae0d0bd974d2a04cbb71973b51dc0013655 (from https://pypi.org/simple/gtdbtk/) (requires-python:>=3.6), version: 1.0.2
2020-07-18T07:27:43,243   Found link https://files.pythonhosted.org/packages/f0/28/78411977ec02799a3a16a08ba9ea036851fd23d26126a583d7a4dbd7e129/gtdbtk-1.1.0.tar.gz#sha256=ffee0895b016c173ad043853a7d5111154f7e04194d2a2bc05a150acf9669f8a (from https://pypi.org/simple/gtdbtk/) (requires-python:>=3.6), version: 1.1.0
2020-07-18T07:27:43,244   Found link https://files.pythonhosted.org/packages/68/d0/bcdb38880ed7e0d0ae563c62b1f192b1d77a35a0d00b193f9e5a01817454/gtdbtk-1.1.1.tar.gz#sha256=b1ee2e8c0a75132b8061b454676f9dd68acfeaf6ee71fab48db005b6eed57263 (from https://pypi.org/simple/gtdbtk/) (requires-python:>=3.6), version: 1.1.1
2020-07-18T07:27:43,245   Skipping link: No binaries permitted for gtdbtk: https://files.pythonhosted.org/packages/f3/56/60ff2a296580b4e5741592ad17ca874ba024f7f5c9c225d7cadfb9cfd54f/gtdbtk-1.2.0-py3-none-any.whl#sha256=ab384e5e12dd2a8abe3882778963d6eabc09964a254c57730df308091e7953f3 (from https://pypi.org/simple/gtdbtk/) (requires-python:>=3.6)
2020-07-18T07:27:43,246   Found link https://files.pythonhosted.org/packages/fd/9d/2060d8cdefde94050a969360e8b1343d6c441b35f57ca3000ec2b8c0c950/gtdbtk-1.2.0.tar.gz#sha256=1eda0b342b090f7c03ddcacee0ef249fcaa0a05e664b06a88fcf57b65d990cb5 (from https://pypi.org/simple/gtdbtk/) (requires-python:>=3.6), version: 1.2.0
2020-07-18T07:27:43,247   Skipping link: No binaries permitted for gtdbtk: https://files.pythonhosted.org/packages/ef/47/293fd1fa9548d876d0da7f2a99a3784614850d84f9667dc08c1d28a50737/gtdbtk-1.3.0-py3-none-any.whl#sha256=ea9202aa300c40a71a82b9b005938d02d29b40908cfcac625ad4c178477a6c3b (from https://pypi.org/simple/gtdbtk/) (requires-python:>=3.6)
2020-07-18T07:27:43,248   Found link https://files.pythonhosted.org/packages/f0/bf/775eb9ba5e42ab33977228a3121db7f66c8b8ac422e0c8df7a51e14410b3/gtdbtk-1.3.0.tar.gz#sha256=50f83378ae4d1116f9f98fc75088a851f39904772b91f41dab782c2d97dba00f (from https://pypi.org/simple/gtdbtk/) (requires-python:>=3.6), version: 1.3.0
2020-07-18T07:27:43,263 Given no hashes to check 1 links for project 'gtdbtk': discarding no candidates
2020-07-18T07:27:43,265 Using version 1.3.0 (newest of versions: 1.3.0)
2020-07-18T07:27:43,271 Collecting gtdbtk==1.3.0
2020-07-18T07:27:43,274   Created temporary directory: /tmp/pip-unpack-z5r3r6lo
2020-07-18T07:27:43,530   Downloading gtdbtk-1.3.0.tar.gz (1.7 MB)
2020-07-18T07:27:45,108   Added gtdbtk==1.3.0 from https://files.pythonhosted.org/packages/f0/bf/775eb9ba5e42ab33977228a3121db7f66c8b8ac422e0c8df7a51e14410b3/gtdbtk-1.3.0.tar.gz#sha256=50f83378ae4d1116f9f98fc75088a851f39904772b91f41dab782c2d97dba00f to build tracker '/tmp/pip-req-tracker-zo7oaf8c'
2020-07-18T07:27:45,111     Running setup.py (path:/tmp/pip-wheel-cft09785/gtdbtk/setup.py) egg_info for package gtdbtk
2020-07-18T07:27:45,113     Created temporary directory: /tmp/pip-pip-egg-info-b8l7n0ce
2020-07-18T07:27:45,114     Running command python setup.py egg_info
2020-07-18T07:27:47,123     running egg_info
2020-07-18T07:27:47,128     creating /tmp/pip-pip-egg-info-b8l7n0ce/gtdbtk.egg-info
2020-07-18T07:27:47,147     writing /tmp/pip-pip-egg-info-b8l7n0ce/gtdbtk.egg-info/PKG-INFO
2020-07-18T07:27:47,153     writing dependency_links to /tmp/pip-pip-egg-info-b8l7n0ce/gtdbtk.egg-info/dependency_links.txt
2020-07-18T07:27:47,157     writing entry points to /tmp/pip-pip-egg-info-b8l7n0ce/gtdbtk.egg-info/entry_points.txt
2020-07-18T07:27:47,159     writing requirements to /tmp/pip-pip-egg-info-b8l7n0ce/gtdbtk.egg-info/requires.txt
2020-07-18T07:27:47,161     writing top-level names to /tmp/pip-pip-egg-info-b8l7n0ce/gtdbtk.egg-info/top_level.txt
2020-07-18T07:27:47,165     writing manifest file '/tmp/pip-pip-egg-info-b8l7n0ce/gtdbtk.egg-info/SOURCES.txt'
2020-07-18T07:27:47,461     package init file 'gtdbtk/tests/__init__.py' not found (or not a regular file)
2020-07-18T07:27:47,482     reading manifest file '/tmp/pip-pip-egg-info-b8l7n0ce/gtdbtk.egg-info/SOURCES.txt'
2020-07-18T07:27:47,485     reading manifest template 'MANIFEST.in'
2020-07-18T07:27:47,487     warning: no files found matching 'genome_1.fna'
2020-07-18T07:27:47,488     warning: no files found matching 'genome_2.fna'
2020-07-18T07:27:47,488     warning: no files found matching 'genome_3.fna'
2020-07-18T07:27:47,490     warning: no previously-included files matching 'genome_*_protein.fna' found anywhere in distribution
2020-07-18T07:27:47,498     writing manifest file '/tmp/pip-pip-egg-info-b8l7n0ce/gtdbtk.egg-info/SOURCES.txt'
2020-07-18T07:27:47,619   Source in /tmp/pip-wheel-cft09785/gtdbtk has version 1.3.0, which satisfies requirement gtdbtk==1.3.0 from https://files.pythonhosted.org/packages/f0/bf/775eb9ba5e42ab33977228a3121db7f66c8b8ac422e0c8df7a51e14410b3/gtdbtk-1.3.0.tar.gz#sha256=50f83378ae4d1116f9f98fc75088a851f39904772b91f41dab782c2d97dba00f
2020-07-18T07:27:47,621   Removed gtdbtk==1.3.0 from https://files.pythonhosted.org/packages/f0/bf/775eb9ba5e42ab33977228a3121db7f66c8b8ac422e0c8df7a51e14410b3/gtdbtk-1.3.0.tar.gz#sha256=50f83378ae4d1116f9f98fc75088a851f39904772b91f41dab782c2d97dba00f from build tracker '/tmp/pip-req-tracker-zo7oaf8c'
2020-07-18T07:27:47,625 Building wheels for collected packages: gtdbtk
2020-07-18T07:27:47,634   Created temporary directory: /tmp/pip-wheel-aflv_2z5
2020-07-18T07:27:47,635   Building wheel for gtdbtk (setup.py): started
2020-07-18T07:27:47,636   Destination directory: /tmp/pip-wheel-aflv_2z5
2020-07-18T07:27:47,636   Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-cft09785/gtdbtk/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-cft09785/gtdbtk/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-aflv_2z5
2020-07-18T07:27:49,647   running bdist_wheel
2020-07-18T07:27:49,662   running build
2020-07-18T07:27:49,662   running build_py
2020-07-18T07:27:49,940   creating build
2020-07-18T07:27:49,940   creating build/lib
2020-07-18T07:27:49,942   creating build/lib/gtdbtk
2020-07-18T07:27:49,945   copying gtdbtk/reroot_tree.py -> build/lib/gtdbtk
2020-07-18T07:27:49,950   copying gtdbtk/__init__.py -> build/lib/gtdbtk
2020-07-18T07:27:49,953   copying gtdbtk/decorate.py -> build/lib/gtdbtk
2020-07-18T07:27:49,959   copying gtdbtk/classify.py -> build/lib/gtdbtk
2020-07-18T07:27:49,972   copying gtdbtk/tools.py -> build/lib/gtdbtk
2020-07-18T07:27:49,976   copying gtdbtk/__main__.py -> build/lib/gtdbtk
2020-07-18T07:27:49,985   copying gtdbtk/markers.py -> build/lib/gtdbtk
2020-07-18T07:27:49,993   copying gtdbtk/trim_msa.py -> build/lib/gtdbtk
2020-07-18T07:27:49,999   copying gtdbtk/exceptions.py -> build/lib/gtdbtk
2020-07-18T07:27:50,004   copying gtdbtk/main.py -> build/lib/gtdbtk
2020-07-18T07:27:50,011   copying gtdbtk/ani_rep.py -> build/lib/gtdbtk
2020-07-18T07:27:50,015   copying gtdbtk/relative_distance.py -> build/lib/gtdbtk
2020-07-18T07:27:50,022   copying gtdbtk/infer_ranks.py -> build/lib/gtdbtk
2020-07-18T07:27:50,028   copying gtdbtk/misc.py -> build/lib/gtdbtk
2020-07-18T07:27:50,038   creating build/lib/gtdbtk/biolib_lite
2020-07-18T07:27:50,040   copying gtdbtk/biolib_lite/parallel.py -> build/lib/gtdbtk/biolib_lite
2020-07-18T07:27:50,045   copying gtdbtk/biolib_lite/__init__.py -> build/lib/gtdbtk/biolib_lite
2020-07-18T07:27:50,048   copying gtdbtk/biolib_lite/logger.py -> build/lib/gtdbtk/biolib_lite
2020-07-18T07:27:50,053   copying gtdbtk/biolib_lite/prodigal_biolib.py -> build/lib/gtdbtk/biolib_lite
2020-07-18T07:27:50,058   copying gtdbtk/biolib_lite/custom_help_formatter.py -> build/lib/gtdbtk/biolib_lite
2020-07-18T07:27:50,063   copying gtdbtk/biolib_lite/seq_io.py -> build/lib/gtdbtk/biolib_lite
2020-07-18T07:27:50,067   copying gtdbtk/biolib_lite/exceptions.py -> build/lib/gtdbtk/biolib_lite
2020-07-18T07:27:50,071   copying gtdbtk/biolib_lite/common.py -> build/lib/gtdbtk/biolib_lite
2020-07-18T07:27:50,076   copying gtdbtk/biolib_lite/execute.py -> build/lib/gtdbtk/biolib_lite
2020-07-18T07:27:50,081   copying gtdbtk/biolib_lite/newick.py -> build/lib/gtdbtk/biolib_lite
2020-07-18T07:27:50,086   copying gtdbtk/biolib_lite/taxonomy.py -> build/lib/gtdbtk/biolib_lite
2020-07-18T07:27:50,096   creating build/lib/gtdbtk/config
2020-07-18T07:27:50,099   copying gtdbtk/config/__init__.py -> build/lib/gtdbtk/config
2020-07-18T07:27:50,103   copying gtdbtk/config/output.py -> build/lib/gtdbtk/config
2020-07-18T07:27:50,107   copying gtdbtk/config/config_template.py -> build/lib/gtdbtk/config
2020-07-18T07:27:50,112   copying gtdbtk/config/config.py -> build/lib/gtdbtk/config
2020-07-18T07:27:50,119   creating build/lib/gtdbtk/external
2020-07-18T07:27:50,121   copying gtdbtk/external/hmm_aligner.py -> build/lib/gtdbtk/external
2020-07-18T07:27:50,127   copying gtdbtk/external/prodigal.py -> build/lib/gtdbtk/external
2020-07-18T07:27:50,132   copying gtdbtk/external/mash.py -> build/lib/gtdbtk/external
2020-07-18T07:27:50,136   copying gtdbtk/external/__init__.py -> build/lib/gtdbtk/external
2020-07-18T07:27:50,139   copying gtdbtk/external/tigrfam_search.py -> build/lib/gtdbtk/external
2020-07-18T07:27:50,146   copying gtdbtk/external/fasttree.py -> build/lib/gtdbtk/external
2020-07-18T07:27:50,152   copying gtdbtk/external/pfam_search.py -> build/lib/gtdbtk/external
2020-07-18T07:27:50,158   copying gtdbtk/external/pplacer.py -> build/lib/gtdbtk/external
2020-07-18T07:27:50,164   copying gtdbtk/external/fastani.py -> build/lib/gtdbtk/external
2020-07-18T07:27:50,168   package init file 'gtdbtk/tests/__init__.py' not found (or not a regular file)
2020-07-18T07:27:50,171   creating build/lib/gtdbtk/external/pypfam
2020-07-18T07:27:50,173   copying gtdbtk/external/pypfam/__init__.py -> build/lib/gtdbtk/external/pypfam
2020-07-18T07:27:50,178   creating build/lib/gtdbtk/external/pypfam/HMM
2020-07-18T07:27:50,180   copying gtdbtk/external/pypfam/HMM/__init__.py -> build/lib/gtdbtk/external/pypfam/HMM
2020-07-18T07:27:50,183   copying gtdbtk/external/pypfam/HMM/HMMUnit.py -> build/lib/gtdbtk/external/pypfam/HMM
2020-07-18T07:27:50,187   copying gtdbtk/external/pypfam/HMM/HMMResultsIO.py -> build/lib/gtdbtk/external/pypfam/HMM
2020-07-18T07:27:50,194   copying gtdbtk/external/pypfam/HMM/HMMSequence.py -> build/lib/gtdbtk/external/pypfam/HMM
2020-07-18T07:27:50,197   copying gtdbtk/external/pypfam/HMM/HMMMatch.py -> build/lib/gtdbtk/external/pypfam/HMM
2020-07-18T07:27:50,201   copying gtdbtk/external/pypfam/HMM/HMMResults.py -> build/lib/gtdbtk/external/pypfam/HMM
2020-07-18T07:27:50,207   creating build/lib/gtdbtk/external/pypfam/Scan
2020-07-18T07:27:50,209   copying gtdbtk/external/pypfam/Scan/PfamScan.py -> build/lib/gtdbtk/external/pypfam/Scan
2020-07-18T07:27:50,215   copying gtdbtk/external/pypfam/Scan/__init__.py -> build/lib/gtdbtk/external/pypfam/Scan
2020-07-18T07:27:50,220   creating build/lib/gtdbtk/io
2020-07-18T07:27:50,222   copying gtdbtk/io/__init__.py -> build/lib/gtdbtk/io
2020-07-18T07:27:50,225   copying gtdbtk/io/gtdb_radii.py -> build/lib/gtdbtk/io
2020-07-18T07:27:50,230   creating build/lib/gtdbtk/io/marker
2020-07-18T07:27:50,232   copying gtdbtk/io/marker/__init__.py -> build/lib/gtdbtk/io/marker
2020-07-18T07:27:50,236   copying gtdbtk/io/marker/tophit.py -> build/lib/gtdbtk/io/marker
2020-07-18T07:27:50,241   copying gtdbtk/io/marker/copy_number.py -> build/lib/gtdbtk/io/marker
2020-07-18T07:27:50,247   creating build/lib/gtdbtk/io/prodigal
2020-07-18T07:27:50,248   copying gtdbtk/io/prodigal/__init__.py -> build/lib/gtdbtk/io/prodigal
2020-07-18T07:27:50,252   copying gtdbtk/io/prodigal/tln_table_summary.py -> build/lib/gtdbtk/io/prodigal
2020-07-18T07:27:50,256   copying gtdbtk/io/prodigal/tln_table.py -> build/lib/gtdbtk/io/prodigal
2020-07-18T07:27:50,263   copying gtdbtk/VERSION -> build/lib/gtdbtk
2020-07-18T07:27:50,269   creating build/lib/gtdbtk/tests
2020-07-18T07:27:50,269   creating build/lib/gtdbtk/tests/data
2020-07-18T07:27:50,271   creating build/lib/gtdbtk/tests/data/genomes
2020-07-18T07:27:50,273   copying gtdbtk/tests/data/genomes/genome_1.fna -> build/lib/gtdbtk/tests/data/genomes
2020-07-18T07:27:50,552   copying gtdbtk/tests/data/genomes/genome_3.fna -> build/lib/gtdbtk/tests/data/genomes
2020-07-18T07:27:50,669   copying gtdbtk/tests/data/genomes/genome_2.fna -> build/lib/gtdbtk/tests/data/genomes
2020-07-18T07:27:50,825   installing to build/bdist.linux-armv7l/wheel
2020-07-18T07:27:50,826   running install
2020-07-18T07:27:50,828   running install_lib
2020-07-18T07:27:50,836   creating build/bdist.linux-armv7l
2020-07-18T07:27:50,837   creating build/bdist.linux-armv7l/wheel
2020-07-18T07:27:50,841   creating build/bdist.linux-armv7l/wheel/gtdbtk
2020-07-18T07:27:50,843   copying build/lib/gtdbtk/reroot_tree.py -> build/bdist.linux-armv7l/wheel/gtdbtk
2020-07-18T07:27:50,848   copying build/lib/gtdbtk/__init__.py -> build/bdist.linux-armv7l/wheel/gtdbtk
2020-07-18T07:27:50,852   copying build/lib/gtdbtk/decorate.py -> build/bdist.linux-armv7l/wheel/gtdbtk
2020-07-18T07:27:50,860   creating build/bdist.linux-armv7l/wheel/gtdbtk/biolib_lite
2020-07-18T07:27:50,863   copying build/lib/gtdbtk/biolib_lite/parallel.py -> build/bdist.linux-armv7l/wheel/gtdbtk/biolib_lite
2020-07-18T07:27:50,870   copying build/lib/gtdbtk/biolib_lite/__init__.py -> build/bdist.linux-armv7l/wheel/gtdbtk/biolib_lite
2020-07-18T07:27:50,874   copying build/lib/gtdbtk/biolib_lite/logger.py -> build/bdist.linux-armv7l/wheel/gtdbtk/biolib_lite
2020-07-18T07:27:50,880   copying build/lib/gtdbtk/biolib_lite/prodigal_biolib.py -> build/bdist.linux-armv7l/wheel/gtdbtk/biolib_lite
2020-07-18T07:27:50,887   copying build/lib/gtdbtk/biolib_lite/custom_help_formatter.py -> build/bdist.linux-armv7l/wheel/gtdbtk/biolib_lite
2020-07-18T07:27:50,893   copying build/lib/gtdbtk/biolib_lite/seq_io.py -> build/bdist.linux-armv7l/wheel/gtdbtk/biolib_lite
2020-07-18T07:27:50,900   copying build/lib/gtdbtk/biolib_lite/exceptions.py -> build/bdist.linux-armv7l/wheel/gtdbtk/biolib_lite
2020-07-18T07:27:50,905   copying build/lib/gtdbtk/biolib_lite/common.py -> build/bdist.linux-armv7l/wheel/gtdbtk/biolib_lite
2020-07-18T07:27:50,911   copying build/lib/gtdbtk/biolib_lite/execute.py -> build/bdist.linux-armv7l/wheel/gtdbtk/biolib_lite
2020-07-18T07:27:50,917   copying build/lib/gtdbtk/biolib_lite/newick.py -> build/bdist.linux-armv7l/wheel/gtdbtk/biolib_lite
2020-07-18T07:27:50,923   copying build/lib/gtdbtk/biolib_lite/taxonomy.py -> build/bdist.linux-armv7l/wheel/gtdbtk/biolib_lite
2020-07-18T07:27:50,931   copying build/lib/gtdbtk/classify.py -> build/bdist.linux-armv7l/wheel/gtdbtk
2020-07-18T07:27:50,946   copying build/lib/gtdbtk/VERSION -> build/bdist.linux-armv7l/wheel/gtdbtk
2020-07-18T07:27:50,953   creating build/bdist.linux-armv7l/wheel/gtdbtk/tests
2020-07-18T07:27:50,957   creating build/bdist.linux-armv7l/wheel/gtdbtk/tests/data
2020-07-18T07:27:50,962   creating build/bdist.linux-armv7l/wheel/gtdbtk/tests/data/genomes
2020-07-18T07:27:50,964   copying build/lib/gtdbtk/tests/data/genomes/genome_1.fna -> build/bdist.linux-armv7l/wheel/gtdbtk/tests/data/genomes
2020-07-18T07:27:51,249   copying build/lib/gtdbtk/tests/data/genomes/genome_3.fna -> build/bdist.linux-armv7l/wheel/gtdbtk/tests/data/genomes
2020-07-18T07:27:51,370   copying build/lib/gtdbtk/tests/data/genomes/genome_2.fna -> build/bdist.linux-armv7l/wheel/gtdbtk/tests/data/genomes
2020-07-18T07:27:51,499   copying build/lib/gtdbtk/tools.py -> build/bdist.linux-armv7l/wheel/gtdbtk
2020-07-18T07:27:51,506   copying build/lib/gtdbtk/__main__.py -> build/bdist.linux-armv7l/wheel/gtdbtk
2020-07-18T07:27:51,516   creating build/bdist.linux-armv7l/wheel/gtdbtk/config
2020-07-18T07:27:51,518   copying build/lib/gtdbtk/config/__init__.py -> build/bdist.linux-armv7l/wheel/gtdbtk/config
2020-07-18T07:27:51,523   copying build/lib/gtdbtk/config/output.py -> build/bdist.linux-armv7l/wheel/gtdbtk/config
2020-07-18T07:27:51,529   copying build/lib/gtdbtk/config/config_template.py -> build/bdist.linux-armv7l/wheel/gtdbtk/config
2020-07-18T07:27:51,536   copying build/lib/gtdbtk/config/config.py -> build/bdist.linux-armv7l/wheel/gtdbtk/config
2020-07-18T07:27:51,543   copying build/lib/gtdbtk/markers.py -> build/bdist.linux-armv7l/wheel/gtdbtk
2020-07-18T07:27:51,553   creating build/bdist.linux-armv7l/wheel/gtdbtk/io
2020-07-18T07:27:51,557   creating build/bdist.linux-armv7l/wheel/gtdbtk/io/prodigal
2020-07-18T07:27:51,560   copying build/lib/gtdbtk/io/prodigal/__init__.py -> build/bdist.linux-armv7l/wheel/gtdbtk/io/prodigal
2020-07-18T07:27:51,565   copying build/lib/gtdbtk/io/prodigal/tln_table_summary.py -> build/bdist.linux-armv7l/wheel/gtdbtk/io/prodigal
2020-07-18T07:27:51,571   copying build/lib/gtdbtk/io/prodigal/tln_table.py -> build/bdist.linux-armv7l/wheel/gtdbtk/io/prodigal
2020-07-18T07:27:51,576   copying build/lib/gtdbtk/io/__init__.py -> build/bdist.linux-armv7l/wheel/gtdbtk/io
2020-07-18T07:27:51,581   copying build/lib/gtdbtk/io/gtdb_radii.py -> build/bdist.linux-armv7l/wheel/gtdbtk/io
2020-07-18T07:27:51,588   creating build/bdist.linux-armv7l/wheel/gtdbtk/io/marker
2020-07-18T07:27:51,590   copying build/lib/gtdbtk/io/marker/__init__.py -> build/bdist.linux-armv7l/wheel/gtdbtk/io/marker
2020-07-18T07:27:51,595   copying build/lib/gtdbtk/io/marker/tophit.py -> build/bdist.linux-armv7l/wheel/gtdbtk/io/marker
2020-07-18T07:27:51,601   copying build/lib/gtdbtk/io/marker/copy_number.py -> build/bdist.linux-armv7l/wheel/gtdbtk/io/marker
2020-07-18T07:27:51,608   copying build/lib/gtdbtk/trim_msa.py -> build/bdist.linux-armv7l/wheel/gtdbtk
2020-07-18T07:27:51,615   copying build/lib/gtdbtk/exceptions.py -> build/bdist.linux-armv7l/wheel/gtdbtk
2020-07-18T07:27:51,621   copying build/lib/gtdbtk/main.py -> build/bdist.linux-armv7l/wheel/gtdbtk
2020-07-18T07:27:51,630   copying build/lib/gtdbtk/ani_rep.py -> build/bdist.linux-armv7l/wheel/gtdbtk
2020-07-18T07:27:51,636   copying build/lib/gtdbtk/relative_distance.py -> build/bdist.linux-armv7l/wheel/gtdbtk
2020-07-18T07:27:51,646   creating build/bdist.linux-armv7l/wheel/gtdbtk/external
2020-07-18T07:27:51,648   copying build/lib/gtdbtk/external/hmm_aligner.py -> build/bdist.linux-armv7l/wheel/gtdbtk/external
2020-07-18T07:27:51,655   copying build/lib/gtdbtk/external/prodigal.py -> build/bdist.linux-armv7l/wheel/gtdbtk/external
2020-07-18T07:27:51,662   copying build/lib/gtdbtk/external/mash.py -> build/bdist.linux-armv7l/wheel/gtdbtk/external
2020-07-18T07:27:51,669   copying build/lib/gtdbtk/external/__init__.py -> build/bdist.linux-armv7l/wheel/gtdbtk/external
2020-07-18T07:27:51,673   copying build/lib/gtdbtk/external/tigrfam_search.py -> build/bdist.linux-armv7l/wheel/gtdbtk/external
2020-07-18T07:27:51,681   creating build/bdist.linux-armv7l/wheel/gtdbtk/external/pypfam
2020-07-18T07:27:51,683   copying build/lib/gtdbtk/external/pypfam/__init__.py -> build/bdist.linux-armv7l/wheel/gtdbtk/external/pypfam
2020-07-18T07:27:51,690   creating build/bdist.linux-armv7l/wheel/gtdbtk/external/pypfam/HMM
2020-07-18T07:27:51,692   copying build/lib/gtdbtk/external/pypfam/HMM/__init__.py -> build/bdist.linux-armv7l/wheel/gtdbtk/external/pypfam/HMM
2020-07-18T07:27:51,697   copying build/lib/gtdbtk/external/pypfam/HMM/HMMUnit.py -> build/bdist.linux-armv7l/wheel/gtdbtk/external/pypfam/HMM
2020-07-18T07:27:51,702   copying build/lib/gtdbtk/external/pypfam/HMM/HMMResultsIO.py -> build/bdist.linux-armv7l/wheel/gtdbtk/external/pypfam/HMM
2020-07-18T07:27:51,710   copying build/lib/gtdbtk/external/pypfam/HMM/HMMSequence.py -> build/bdist.linux-armv7l/wheel/gtdbtk/external/pypfam/HMM
2020-07-18T07:27:51,715   copying build/lib/gtdbtk/external/pypfam/HMM/HMMMatch.py -> build/bdist.linux-armv7l/wheel/gtdbtk/external/pypfam/HMM
2020-07-18T07:27:51,721   copying build/lib/gtdbtk/external/pypfam/HMM/HMMResults.py -> build/bdist.linux-armv7l/wheel/gtdbtk/external/pypfam/HMM
2020-07-18T07:27:51,729   creating build/bdist.linux-armv7l/wheel/gtdbtk/external/pypfam/Scan
2020-07-18T07:27:51,731   copying build/lib/gtdbtk/external/pypfam/Scan/PfamScan.py -> build/bdist.linux-armv7l/wheel/gtdbtk/external/pypfam/Scan
2020-07-18T07:27:51,739   copying build/lib/gtdbtk/external/pypfam/Scan/__init__.py -> build/bdist.linux-armv7l/wheel/gtdbtk/external/pypfam/Scan
2020-07-18T07:27:51,743   copying build/lib/gtdbtk/external/fasttree.py -> build/bdist.linux-armv7l/wheel/gtdbtk/external
2020-07-18T07:27:51,750   copying build/lib/gtdbtk/external/pfam_search.py -> build/bdist.linux-armv7l/wheel/gtdbtk/external
2020-07-18T07:27:51,756   copying build/lib/gtdbtk/external/pplacer.py -> build/bdist.linux-armv7l/wheel/gtdbtk/external
2020-07-18T07:27:51,762   copying build/lib/gtdbtk/external/fastani.py -> build/bdist.linux-armv7l/wheel/gtdbtk/external
2020-07-18T07:27:51,769   copying build/lib/gtdbtk/infer_ranks.py -> build/bdist.linux-armv7l/wheel/gtdbtk
2020-07-18T07:27:51,776   copying build/lib/gtdbtk/misc.py -> build/bdist.linux-armv7l/wheel/gtdbtk
2020-07-18T07:27:51,781   running install_data
2020-07-18T07:27:51,789   creating build/bdist.linux-armv7l/wheel/gtdbtk-1.3.0.data
2020-07-18T07:27:51,790   creating build/bdist.linux-armv7l/wheel/gtdbtk-1.3.0.data/data
2020-07-18T07:27:51,793   copying LICENSE -> build/bdist.linux-armv7l/wheel/gtdbtk-1.3.0.data/data/
2020-07-18T07:27:51,800   running install_egg_info
2020-07-18T07:27:51,837   running egg_info
2020-07-18T07:27:51,849   writing gtdbtk.egg-info/PKG-INFO
2020-07-18T07:27:51,854   writing dependency_links to gtdbtk.egg-info/dependency_links.txt
2020-07-18T07:27:51,857   writing entry points to gtdbtk.egg-info/entry_points.txt
2020-07-18T07:27:51,860   writing requirements to gtdbtk.egg-info/requires.txt
2020-07-18T07:27:51,862   writing top-level names to gtdbtk.egg-info/top_level.txt
2020-07-18T07:27:51,884   reading manifest file 'gtdbtk.egg-info/SOURCES.txt'
2020-07-18T07:27:51,891   reading manifest template 'MANIFEST.in'
2020-07-18T07:27:51,892   warning: no files found matching 'genome_1.fna'
2020-07-18T07:27:51,892   warning: no files found matching 'genome_2.fna'
2020-07-18T07:27:51,893   warning: no files found matching 'genome_3.fna'
2020-07-18T07:27:51,894   warning: no previously-included files matching 'genome_*_protein.fna' found anywhere in distribution
2020-07-18T07:27:51,904   writing manifest file 'gtdbtk.egg-info/SOURCES.txt'
2020-07-18T07:27:51,907   Copying gtdbtk.egg-info to build/bdist.linux-armv7l/wheel/gtdbtk-1.3.0-py3.7.egg-info
2020-07-18T07:27:51,940   running install_scripts
2020-07-18T07:27:52,090   adding license file "LICENSE" (matched pattern "LICEN[CS]E*")
2020-07-18T07:27:52,105   creating build/bdist.linux-armv7l/wheel/gtdbtk-1.3.0.dist-info/WHEEL
2020-07-18T07:27:52,110   creating '/tmp/pip-wheel-aflv_2z5/gtdbtk-1.3.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2020-07-18T07:27:52,116   adding 'gtdbtk/VERSION'
2020-07-18T07:27:52,118   adding 'gtdbtk/__init__.py'
2020-07-18T07:27:52,124   adding 'gtdbtk/__main__.py'
2020-07-18T07:27:52,128   adding 'gtdbtk/ani_rep.py'
2020-07-18T07:27:52,143   adding 'gtdbtk/classify.py'
2020-07-18T07:27:52,148   adding 'gtdbtk/decorate.py'
2020-07-18T07:27:52,151   adding 'gtdbtk/exceptions.py'
2020-07-18T07:27:52,155   adding 'gtdbtk/infer_ranks.py'
2020-07-18T07:27:52,160   adding 'gtdbtk/main.py'
2020-07-18T07:27:52,167   adding 'gtdbtk/markers.py'
2020-07-18T07:27:52,170   adding 'gtdbtk/misc.py'
2020-07-18T07:27:52,174   adding 'gtdbtk/relative_distance.py'
2020-07-18T07:27:52,177   adding 'gtdbtk/reroot_tree.py'
2020-07-18T07:27:52,180   adding 'gtdbtk/tools.py'
2020-07-18T07:27:52,184   adding 'gtdbtk/trim_msa.py'
2020-07-18T07:27:52,188   adding 'gtdbtk/biolib_lite/__init__.py'
2020-07-18T07:27:52,191   adding 'gtdbtk/biolib_lite/common.py'
2020-07-18T07:27:52,194   adding 'gtdbtk/biolib_lite/custom_help_formatter.py'
2020-07-18T07:27:52,197   adding 'gtdbtk/biolib_lite/exceptions.py'
2020-07-18T07:27:52,200   adding 'gtdbtk/biolib_lite/execute.py'
2020-07-18T07:27:52,203   adding 'gtdbtk/biolib_lite/logger.py'
2020-07-18T07:27:52,206   adding 'gtdbtk/biolib_lite/newick.py'
2020-07-18T07:27:52,209   adding 'gtdbtk/biolib_lite/parallel.py'
2020-07-18T07:27:52,213   adding 'gtdbtk/biolib_lite/prodigal_biolib.py'
2020-07-18T07:27:52,217   adding 'gtdbtk/biolib_lite/seq_io.py'
2020-07-18T07:27:52,223   adding 'gtdbtk/biolib_lite/taxonomy.py'
2020-07-18T07:27:52,227   adding 'gtdbtk/config/__init__.py'
2020-07-18T07:27:52,230   adding 'gtdbtk/config/config.py'
2020-07-18T07:27:52,234   adding 'gtdbtk/config/config_template.py'
2020-07-18T07:27:52,236   adding 'gtdbtk/config/output.py'
2020-07-18T07:27:52,240   adding 'gtdbtk/external/__init__.py'
2020-07-18T07:27:52,244   adding 'gtdbtk/external/fastani.py'
2020-07-18T07:27:52,247   adding 'gtdbtk/external/fasttree.py'
2020-07-18T07:27:52,251   adding 'gtdbtk/external/hmm_aligner.py'
2020-07-18T07:27:52,255   adding 'gtdbtk/external/mash.py'
2020-07-18T07:27:52,258   adding 'gtdbtk/external/pfam_search.py'
2020-07-18T07:27:52,262   adding 'gtdbtk/external/pplacer.py'
2020-07-18T07:27:52,265   adding 'gtdbtk/external/prodigal.py'
2020-07-18T07:27:52,269   adding 'gtdbtk/external/tigrfam_search.py'
2020-07-18T07:27:52,272   adding 'gtdbtk/external/pypfam/__init__.py'
2020-07-18T07:27:52,276   adding 'gtdbtk/external/pypfam/HMM/HMMMatch.py'
2020-07-18T07:27:52,279   adding 'gtdbtk/external/pypfam/HMM/HMMResults.py'
2020-07-18T07:27:52,283   adding 'gtdbtk/external/pypfam/HMM/HMMResultsIO.py'
2020-07-18T07:27:52,286   adding 'gtdbtk/external/pypfam/HMM/HMMSequence.py'
2020-07-18T07:27:52,289   adding 'gtdbtk/external/pypfam/HMM/HMMUnit.py'
2020-07-18T07:27:52,291   adding 'gtdbtk/external/pypfam/HMM/__init__.py'
2020-07-18T07:27:52,297   adding 'gtdbtk/external/pypfam/Scan/PfamScan.py'
2020-07-18T07:27:52,300   adding 'gtdbtk/external/pypfam/Scan/__init__.py'
2020-07-18T07:27:52,304   adding 'gtdbtk/io/__init__.py'
2020-07-18T07:27:52,306   adding 'gtdbtk/io/gtdb_radii.py'
2020-07-18T07:27:52,310   adding 'gtdbtk/io/marker/__init__.py'
2020-07-18T07:27:52,313   adding 'gtdbtk/io/marker/copy_number.py'
2020-07-18T07:27:52,316   adding 'gtdbtk/io/marker/tophit.py'
2020-07-18T07:27:52,320   adding 'gtdbtk/io/prodigal/__init__.py'
2020-07-18T07:27:52,322   adding 'gtdbtk/io/prodigal/tln_table.py'
2020-07-18T07:27:52,325   adding 'gtdbtk/io/prodigal/tln_table_summary.py'
2020-07-18T07:27:54,499   adding 'gtdbtk/tests/data/genomes/genome_1.fna'
2020-07-18T07:27:55,485   adding 'gtdbtk/tests/data/genomes/genome_2.fna'
2020-07-18T07:27:56,382   adding 'gtdbtk/tests/data/genomes/genome_3.fna'
2020-07-18T07:27:56,409   adding 'gtdbtk-1.3.0.data/data/LICENSE'
2020-07-18T07:27:56,422   adding 'gtdbtk-1.3.0.dist-info/LICENSE'
2020-07-18T07:27:56,425   adding 'gtdbtk-1.3.0.dist-info/METADATA'
2020-07-18T07:27:56,427   adding 'gtdbtk-1.3.0.dist-info/WHEEL'
2020-07-18T07:27:56,429   adding 'gtdbtk-1.3.0.dist-info/entry_points.txt'
2020-07-18T07:27:56,431   adding 'gtdbtk-1.3.0.dist-info/top_level.txt'
2020-07-18T07:27:56,432   adding 'gtdbtk-1.3.0.dist-info/RECORD'
2020-07-18T07:27:56,590   removing build/bdist.linux-armv7l/wheel
2020-07-18T07:27:56,793   Building wheel for gtdbtk (setup.py): finished with status 'done'
2020-07-18T07:27:56,822   Created wheel for gtdbtk: filename=gtdbtk-1.3.0-py3-none-any.whl size=1765939 sha256=d7e3fccd83e155a4c737695d252e66a9076b236bed81fc4c193646bd2888ea79
2020-07-18T07:27:56,822   Stored in directory: /tmp/pip-ephem-wheel-cache-f4wqxyie/wheels/20/7e/20/484aff6d80b9d0f21ecef18b31044297d613f13d448a3ad970
2020-07-18T07:27:56,826 Successfully built gtdbtk
2020-07-18T07:27:57,139 Removed build tracker: '/tmp/pip-req-tracker-zo7oaf8c'