2020-07-21T14:09:38,973 Created temporary directory: /tmp/pip-ephem-wheel-cache-mqxkbmpb
2020-07-21T14:09:38,978 Created temporary directory: /tmp/pip-req-tracker-_noj4k6a
2020-07-21T14:09:38,979 Initialized build tracking at /tmp/pip-req-tracker-_noj4k6a
2020-07-21T14:09:38,981 Created build tracker: /tmp/pip-req-tracker-_noj4k6a
2020-07-21T14:09:38,981 Entered build tracker: /tmp/pip-req-tracker-_noj4k6a
2020-07-21T14:09:38,982 Created temporary directory: /tmp/pip-wheel-uyugmhui
2020-07-21T14:09:39,002 1 location(s) to search for versions of python-bioformats:
2020-07-21T14:09:39,002 * https://pypi.org/simple/python-bioformats/
2020-07-21T14:09:39,002 Fetching project page and analyzing links: https://pypi.org/simple/python-bioformats/
2020-07-21T14:09:39,004 Getting page https://pypi.org/simple/python-bioformats/
2020-07-21T14:09:39,009 Found index url https://pypi.org/simple
2020-07-21T14:09:39,275   Found link https://files.pythonhosted.org/packages/e8/d2/3feffac7e5a219de826bc9e56c78b0e63f51dda1623a4a257faa19461d36/python-bioformats-1.0.0pr1.tar.gz#sha256=259117c18990f2c3d4b9c6ec5b3888942b6f9ca804932d27401272013a500ea9 (from https://pypi.org/simple/python-bioformats/), version: 1.0.0pr1
2020-07-21T14:09:39,277   Found link https://files.pythonhosted.org/packages/b9/f8/53a8a14fca7724b245a2bfcf69bd753e85c862f674b9c26b1cc75126eda7/python-bioformats-1.0.0pr2.tar.gz#sha256=9fabdd830c08f144511b4c32f26576106363c0cc993d30a098ecb64e7591631b (from https://pypi.org/simple/python-bioformats/), version: 1.0.0pr2
2020-07-21T14:09:39,278   Found link https://files.pythonhosted.org/packages/f0/c7/7fb50a03bd1a9bfb51a2743e710cd588940f59bdf9525fb6bf019a91dca0/python-bioformats-1.0.0pr3.tar.gz#sha256=f0a431d40ac9ae2573a73c938bb70e2bce256843b0c8bc9ce071f4af233d48d9 (from https://pypi.org/simple/python-bioformats/), version: 1.0.0pr3
2020-07-21T14:09:39,279   Found link https://files.pythonhosted.org/packages/38/77/c318682a2c6c8d500ec872958e87304b88af91658a8fdced9ae2785ad30c/python-bioformats-1.0.0pr7.tar.gz#sha256=3a07dc8327b98eb6acab076626b58e75123e1ed491be0a83cc6ac5adb1b1dd7f (from https://pypi.org/simple/python-bioformats/), version: 1.0.0pr7
2020-07-21T14:09:39,280   Found link https://files.pythonhosted.org/packages/48/cf/a953738d347bbe831228073b51f637a9c22e109950536e10b7181027a16d/python-bioformats-1.0.0pr8.tar.gz#sha256=9581ef8f10c98f63882169b3bad579d0143177fcf4826cc593e8d4378cad72bd (from https://pypi.org/simple/python-bioformats/), version: 1.0.0pr8
2020-07-21T14:09:39,281   Found link https://files.pythonhosted.org/packages/91/1b/4d977041003d61a7877114e1583c849e87abf35627cec20b05bb99bee961/python-bioformats-1.0.0.tar.gz#sha256=1004979909af391f0bbe1aa3c22739f9aae5f8205a56b2301586f480883d11c1 (from https://pypi.org/simple/python-bioformats/), version: 1.0.0
2020-07-21T14:09:39,281   Found link https://files.pythonhosted.org/packages/c6/e8/e429243d1a79bf7f713b7e92aac4bf61eac8c0c1fd3c45b423cb66adeaea/python-bioformats-1.0.1.tar.gz#sha256=2c1b2dac2c950cfebe61e6275d7f815302f55e0ec100c5e49605e792241104bc (from https://pypi.org/simple/python-bioformats/), version: 1.0.1
2020-07-21T14:09:39,282   Found link https://files.pythonhosted.org/packages/d9/bc/4a6e02faf0aed2a913014ea7130ecf8b0c7216e9d706dd3c2853920d87cf/python-bioformats-1.0.1.zip#sha256=f372d8d10a7016a13689a27dd3de68c4978f5f6b05bf7f75602c600fe5000252 (from https://pypi.org/simple/python-bioformats/), version: 1.0.1
2020-07-21T14:09:39,283   Found link https://files.pythonhosted.org/packages/09/76/46e4aa01d4e6dd99647c2b57f280d8509bda7e56985177ca866a7001e486/python-bioformats-1.0.3.zip#sha256=9efc3ac8a7894b64d6eef9de989329cdf8a410e2febf2b1443ecc795da5fec25 (from https://pypi.org/simple/python-bioformats/), version: 1.0.3
2020-07-21T14:09:39,284   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/ee/7e/2bada0201909b6fcb64978b680f1bf84bff4ccf2707e325314773e2a6244/python_bioformats-1.0.3-py2.7.egg#sha256=d1617eb43618c1d7d3d7a1368b4e1d08f49e33e90674982562ca072092eef971 (from https://pypi.org/simple/python-bioformats/)
2020-07-21T14:09:39,285   Found link https://files.pythonhosted.org/packages/3e/71/4abf71368cec92d430db126e9da23cf931cf8f9477db31593c192083b81c/python-bioformats-1.0.4.tar.gz#sha256=fc3fb57ca9b59254017a306c9f292d7179e5d1e997ad01f71185ddd5ddc6239e (from https://pypi.org/simple/python-bioformats/), version: 1.0.4
2020-07-21T14:09:39,286   Found link https://files.pythonhosted.org/packages/d1/a4/e1ba8a46bc0510c789943c3684c44a9ea6d33734e376cefa91706a2b476d/python-bioformats-1.0.5.tar.gz#sha256=aadd3cf4de68b0f7888989275db72c165c5e3794ae2dc06b435fb8ab31f60bd0 (from https://pypi.org/simple/python-bioformats/), version: 1.0.5
2020-07-21T14:09:39,287   Found link https://files.pythonhosted.org/packages/d2/89/c35015fd8adb084141b76850e91610839f14073481c1457062d12f32a66b/python-bioformats-1.0.7.tar.gz#sha256=760b817436b572a3771cb3f3a3e1f63494e25a87854745491e92fae6a38fa82e (from https://pypi.org/simple/python-bioformats/), version: 1.0.7
2020-07-21T14:09:39,288   Found link https://files.pythonhosted.org/packages/2a/a5/358fa76d6fdfe5be08a7d277ec60ac704545cdb35ef0f30b1a2b8a6a56aa/python-bioformats-1.0.8.tar.gz#sha256=70928af3af4784881a7720c516460da752106b17ba7a047aedeb8502a34c0dc8 (from https://pypi.org/simple/python-bioformats/), version: 1.0.8
2020-07-21T14:09:39,289   Found link https://files.pythonhosted.org/packages/4c/77/b7558279579799331fb986661bbcac8e48d72a0acf49edc713a858121add/python-bioformats-1.0.8.zip#sha256=1ada90ca2be2d50386826e7192e5f8123b1274e4fa765c309b6168527f15b558 (from https://pypi.org/simple/python-bioformats/), version: 1.0.8
2020-07-21T14:09:39,290   Found link https://files.pythonhosted.org/packages/4f/f1/2caf66c96fbae1a7b0b00a4399ed0d108f4a2026e069f27be22bfd96653d/python-bioformats-1.0.9.tar.gz#sha256=3af67be17c1e9ce70e08c48d7485a88d79f8809d4094cf21bcab7f442004cf4d (from https://pypi.org/simple/python-bioformats/), version: 1.0.9
2020-07-21T14:09:39,291   Found link https://files.pythonhosted.org/packages/82/06/565966feb9aabf0f26015d1a5c6fa00b7f52e6dcc0a41869e30711acf11f/python-bioformats-1.1.0.tar.gz#sha256=6811ac8b7a0e1c62750fb8c3c5600b5c401079280632d4cadd78847f9c377e5f (from https://pypi.org/simple/python-bioformats/), version: 1.1.0
2020-07-21T14:09:39,291   Found link https://files.pythonhosted.org/packages/b0/e2/f1bc5e83a09941bd98b37f5d403ff010dcdaf0a2132dd89b633659c559ae/python-bioformats-1.2.0.tar.gz#sha256=1a19b4deff971d7ba6144c136fda419f20b8d08ba3540aae74be164fe71580eb (from https://pypi.org/simple/python-bioformats/), version: 1.2.0
2020-07-21T14:09:39,292   Found link https://files.pythonhosted.org/packages/5b/42/ce1bf4f977028079e8f339c8fbd4a79c6edd866153b28c0f11cf0a7815e2/python-bioformats-1.3.0.tar.gz#sha256=c34d29cea01a91303d234031774238ac240b2265c38d78598d0376358e07577c (from https://pypi.org/simple/python-bioformats/), version: 1.3.0
2020-07-21T14:09:39,293   Found link https://files.pythonhosted.org/packages/9a/7e/5cc97f7a2bcb454dc9e67034c0d1946ba86254d6afbf2973317511db29e0/python-bioformats-1.3.1.tar.gz#sha256=88172d343f7dbba6cbca92bd25fdf439d3d1f6ea6746727dcb2169b56d0d2467 (from https://pypi.org/simple/python-bioformats/), version: 1.3.1
2020-07-21T14:09:39,294   Found link https://files.pythonhosted.org/packages/5b/dc/9ed11c7f8f15b7da671c3a0d49649277bf66201f43b4f27f3f0e477a06b0/python-bioformats-1.3.2.tar.gz#sha256=aec73e9edebe564d012ac2e4551a2d0ea0bc1146d00d7802650bc2d820de803b (from https://pypi.org/simple/python-bioformats/), version: 1.3.2
2020-07-21T14:09:39,295   Found link https://files.pythonhosted.org/packages/d2/5f/b74207cc249d730aba8de64a9a8786e457e5ce64416a5b3b1ccad8d9bd73/python-bioformats-1.4.0.tar.gz#sha256=cb843f18261979bd10ed2e0e595d92c9e6d4564d5a8cee31d7569e7d2d1ebd03 (from https://pypi.org/simple/python-bioformats/), version: 1.4.0
2020-07-21T14:09:39,296   Found link https://files.pythonhosted.org/packages/6a/82/5dd3403118d94976852004ee836f3af9635dcdb503131b0da4acff0c1341/python-bioformats-1.5.0.tar.gz#sha256=8af5adeaff467281a51ef8eface2b79bc5d60cc5b989943768da0ea17ebf7daf (from https://pypi.org/simple/python-bioformats/), version: 1.5.0
2020-07-21T14:09:39,297   Skipping link: No binaries permitted for python-bioformats: https://files.pythonhosted.org/packages/12/77/5bed80fa8e9841616b733ff6073446c4378741f0a1d856d673347d87a345/python_bioformats-1.5.0-py3-none-any.whl#sha256=fa557a717647d860068478fadf1c9fb2c41c05f18f46cca433cc97835cf32f3d (from https://pypi.org/simple/python-bioformats/)
2020-07-21T14:09:39,297   Found link https://files.pythonhosted.org/packages/53/d3/7e45a8e0e512b42e006cefaa199ea29e1b2c90124c2d2bf1e3aaf337919d/python-bioformats-1.5.1.tar.gz#sha256=d29e5058e9b746ba070cb5ac1cb7af9f0eb150d2e48b105c844d5b10f5361056 (from https://pypi.org/simple/python-bioformats/), version: 1.5.1
2020-07-21T14:09:39,298   Found link https://files.pythonhosted.org/packages/dd/e8/b4a3648207ea897b810a595098c314ad6666ef66c49a20281fc0fa0b2a91/python-bioformats-1.5.2.tar.gz#sha256=2fe03c2aa9ea59326a81f6e582944046cad77ee0797c9b691d39ee0b29de68ee (from https://pypi.org/simple/python-bioformats/), version: 1.5.2
2020-07-21T14:09:39,299   Skipping link: No binaries permitted for python-bioformats: https://files.pythonhosted.org/packages/85/81/a6abd3e367cbbcd9419ebe476557766bc4e4aa662b2ea2def79f508c8b61/python_bioformats-1.5.2-py2-none-any.whl#sha256=4cf9f36a32e34e53c50c2baba1892fba0356300d4fd2f50fa3385b7d133b662e (from https://pypi.org/simple/python-bioformats/)
2020-07-21T14:09:39,300   Found link https://files.pythonhosted.org/packages/52/cf/b95d5952d3f00b6d3ad240fd5031a9c086468c50667d3c1c7a80bf02b541/python-bioformats-4.0.0rc3.tar.gz#sha256=6ac139866863659ff7375c43b52a314e8a413e49248bbcb1f82585f6858b598d (from https://pypi.org/simple/python-bioformats/), version: 4.0.0rc3
2020-07-21T14:09:39,301   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/30/ae/3d65f9a37d00fbcd163a69fc0d008842e65efdb505facd497cbc3f9d41e9/python_bioformats-4.0.0rc3-py3.8.egg#sha256=51de94f7b74b8fd203314ef46480faf99a8a592a6c3803e8ad75cb5fb91bbbe0 (from https://pypi.org/simple/python-bioformats/)
2020-07-21T14:09:39,301   Found link https://files.pythonhosted.org/packages/51/1b/dfcc50a914489f3ac29b0d88b329fa84a2df2f4c2ae2cefa9f9a332f10d0/python-bioformats-4.0.0rc4.tar.gz#sha256=8fd48e10fb55bf293649ce0582a890d7ea2aad02a39b7a5899d8a51004789be9 (from https://pypi.org/simple/python-bioformats/), version: 4.0.0rc4
2020-07-21T14:09:39,302   Skipping link: No binaries permitted for python-bioformats: https://files.pythonhosted.org/packages/c4/10/772e58a4da51ea1c58ac1ee840d364d36d85f8552ab573847b3a6eece2a3/python_bioformats-4.0.0rc4-py2-none-any.whl#sha256=0012d647286a01b0d6a0b9d94f40e331cc77e2c946ca353d1b4812c3cd22bfdd (from https://pypi.org/simple/python-bioformats/)
2020-07-21T14:09:39,322 Given no hashes to check 1 links for project 'python-bioformats': discarding no candidates
2020-07-21T14:09:39,324 Using version 4.0.0rc3 (newest of versions: 4.0.0rc3)
2020-07-21T14:09:39,331 Collecting python-bioformats==4.0.0rc3
2020-07-21T14:09:39,336   Created temporary directory: /tmp/pip-unpack-l1b_vjfd
2020-07-21T14:09:40,982   Downloading python-bioformats-4.0.0rc3.tar.gz (30.8 MB)
2020-07-21T14:09:52,487   Added python-bioformats==4.0.0rc3 from https://files.pythonhosted.org/packages/52/cf/b95d5952d3f00b6d3ad240fd5031a9c086468c50667d3c1c7a80bf02b541/python-bioformats-4.0.0rc3.tar.gz#sha256=6ac139866863659ff7375c43b52a314e8a413e49248bbcb1f82585f6858b598d to build tracker '/tmp/pip-req-tracker-_noj4k6a'
2020-07-21T14:09:52,491     Running setup.py (path:/tmp/pip-wheel-uyugmhui/python-bioformats/setup.py) egg_info for package python-bioformats
2020-07-21T14:09:52,492     Created temporary directory: /tmp/pip-pip-egg-info-u88wm4nj
2020-07-21T14:09:52,493     Running command python setup.py egg_info
2020-07-21T14:10:00,723     running egg_info
2020-07-21T14:10:00,729     creating /tmp/pip-pip-egg-info-u88wm4nj/python_bioformats.egg-info
2020-07-21T14:10:00,732     writing top-level names to /tmp/pip-pip-egg-info-u88wm4nj/python_bioformats.egg-info/top_level.txt
2020-07-21T14:10:00,735     writing requirements to /tmp/pip-pip-egg-info-u88wm4nj/python_bioformats.egg-info/requires.txt
2020-07-21T14:10:00,737     writing /tmp/pip-pip-egg-info-u88wm4nj/python_bioformats.egg-info/PKG-INFO
2020-07-21T14:10:00,741     writing dependency_links to /tmp/pip-pip-egg-info-u88wm4nj/python_bioformats.egg-info/dependency_links.txt
2020-07-21T14:10:00,746     writing manifest file '/tmp/pip-pip-egg-info-u88wm4nj/python_bioformats.egg-info/SOURCES.txt'
2020-07-21T14:10:01,143     reading manifest file '/tmp/pip-pip-egg-info-u88wm4nj/python_bioformats.egg-info/SOURCES.txt'
2020-07-21T14:10:01,147     reading manifest template 'MANIFEST.in'
2020-07-21T14:10:01,149     warning: no files found matching '*.py' under directory 'bioformats/tests'
2020-07-21T14:10:01,150     warning: no files found matching '*.tif' under directory 'bioformats/tests'
2020-07-21T14:10:01,150     warning: no files found matching '*.xml' under directory 'bioformats/tests'
2020-07-21T14:10:01,156     writing manifest file '/tmp/pip-pip-egg-info-u88wm4nj/python_bioformats.egg-info/SOURCES.txt'
2020-07-21T14:10:01,322   Source in /tmp/pip-wheel-uyugmhui/python-bioformats has version 4.0.0rc3, which satisfies requirement python-bioformats==4.0.0rc3 from https://files.pythonhosted.org/packages/52/cf/b95d5952d3f00b6d3ad240fd5031a9c086468c50667d3c1c7a80bf02b541/python-bioformats-4.0.0rc3.tar.gz#sha256=6ac139866863659ff7375c43b52a314e8a413e49248bbcb1f82585f6858b598d
2020-07-21T14:10:01,324   Removed python-bioformats==4.0.0rc3 from https://files.pythonhosted.org/packages/52/cf/b95d5952d3f00b6d3ad240fd5031a9c086468c50667d3c1c7a80bf02b541/python-bioformats-4.0.0rc3.tar.gz#sha256=6ac139866863659ff7375c43b52a314e8a413e49248bbcb1f82585f6858b598d from build tracker '/tmp/pip-req-tracker-_noj4k6a'
2020-07-21T14:10:01,327 Building wheels for collected packages: python-bioformats
2020-07-21T14:10:01,337   Created temporary directory: /tmp/pip-wheel-ud1jd87v
2020-07-21T14:10:01,338   Building wheel for python-bioformats (setup.py): started
2020-07-21T14:10:01,339   Destination directory: /tmp/pip-wheel-ud1jd87v
2020-07-21T14:10:01,339   Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-uyugmhui/python-bioformats/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-uyugmhui/python-bioformats/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-ud1jd87v
2020-07-21T14:10:04,428   running bdist_wheel
2020-07-21T14:10:04,436   running build
2020-07-21T14:10:04,437   running build_py
2020-07-21T14:10:04,754   creating build
2020-07-21T14:10:04,755   creating build/lib
2020-07-21T14:10:04,756   creating build/lib/bioformats
2020-07-21T14:10:04,759   copying bioformats/formatwriter.py -> build/lib/bioformats
2020-07-21T14:10:04,766   copying bioformats/omexml.py -> build/lib/bioformats
2020-07-21T14:10:04,777   copying bioformats/metadatatools.py -> build/lib/bioformats
2020-07-21T14:10:04,783   copying bioformats/log4j.py -> build/lib/bioformats
2020-07-21T14:10:04,788   copying bioformats/__init__.py -> build/lib/bioformats
2020-07-21T14:10:04,794   copying bioformats/noseplugin.py -> build/lib/bioformats
2020-07-21T14:10:04,799   copying bioformats/formatreader.py -> build/lib/bioformats
2020-07-21T14:10:04,809   copying bioformats/_version.py -> build/lib/bioformats
2020-07-21T14:10:04,817   creating build/lib/bioformats/jars
2020-07-21T14:10:04,820   copying bioformats/jars/loci_tools.jar -> build/lib/bioformats/jars
2020-07-21T14:10:07,759   installing to build/bdist.linux-armv7l/wheel
2020-07-21T14:10:07,760   running install
2020-07-21T14:10:07,761   running install_lib
2020-07-21T14:10:07,769   creating build/bdist.linux-armv7l
2020-07-21T14:10:07,770   creating build/bdist.linux-armv7l/wheel
2020-07-21T14:10:07,774   creating build/bdist.linux-armv7l/wheel/bioformats
2020-07-21T14:10:07,776   copying build/lib/bioformats/formatwriter.py -> build/bdist.linux-armv7l/wheel/bioformats
2020-07-21T14:10:07,783   copying build/lib/bioformats/omexml.py -> build/bdist.linux-armv7l/wheel/bioformats
2020-07-21T14:10:07,794   copying build/lib/bioformats/metadatatools.py -> build/bdist.linux-armv7l/wheel/bioformats
2020-07-21T14:10:07,801   copying build/lib/bioformats/log4j.py -> build/bdist.linux-armv7l/wheel/bioformats
2020-07-21T14:10:07,807   copying build/lib/bioformats/__init__.py -> build/bdist.linux-armv7l/wheel/bioformats
2020-07-21T14:10:07,814   copying build/lib/bioformats/noseplugin.py -> build/bdist.linux-armv7l/wheel/bioformats
2020-07-21T14:10:07,820   copying build/lib/bioformats/formatreader.py -> build/bdist.linux-armv7l/wheel/bioformats
2020-07-21T14:10:07,829   copying build/lib/bioformats/_version.py -> build/bdist.linux-armv7l/wheel/bioformats
2020-07-21T14:10:07,835   creating build/bdist.linux-armv7l/wheel/bioformats/jars
2020-07-21T14:10:07,838   copying build/lib/bioformats/jars/loci_tools.jar -> build/bdist.linux-armv7l/wheel/bioformats/jars
2020-07-21T14:10:10,790   running install_egg_info
2020-07-21T14:10:10,803   running egg_info
2020-07-21T14:10:10,807   writing dependency_links to python_bioformats.egg-info/dependency_links.txt
2020-07-21T14:10:10,811   writing top-level names to python_bioformats.egg-info/top_level.txt
2020-07-21T14:10:10,814   writing python_bioformats.egg-info/PKG-INFO
2020-07-21T14:10:10,819   writing requirements to python_bioformats.egg-info/requires.txt
2020-07-21T14:10:10,869   reading manifest file 'python_bioformats.egg-info/SOURCES.txt'
2020-07-21T14:10:10,882   reading manifest template 'MANIFEST.in'
2020-07-21T14:10:10,884   warning: no files found matching '*.py' under directory 'bioformats/tests'
2020-07-21T14:10:10,886   warning: no files found matching '*.tif' under directory 'bioformats/tests'
2020-07-21T14:10:10,887   warning: no files found matching '*.xml' under directory 'bioformats/tests'
2020-07-21T14:10:10,896   writing manifest file 'python_bioformats.egg-info/SOURCES.txt'
2020-07-21T14:10:10,900   Copying python_bioformats.egg-info to build/bdist.linux-armv7l/wheel/python_bioformats-4.0.0rc3-py3.5.egg-info
2020-07-21T14:10:10,926   running install_scripts
2020-07-21T14:10:10,987   creating build/bdist.linux-armv7l/wheel/python_bioformats-4.0.0rc3.dist-info/WHEEL
2020-07-21T14:10:20,342   Building wheel for python-bioformats (setup.py): finished with status 'done'
2020-07-21T14:10:20,836   Created wheel for python-bioformats: filename=python_bioformats-4.0.0rc3-py3-none-any.whl size=30552909 sha256=b16d91e79a03e8e4d3a9c504a441b859803374aeebaffd67a67ab3bf332a2793
2020-07-21T14:10:20,837   Stored in directory: /tmp/pip-ephem-wheel-cache-mqxkbmpb/wheels/80/dd/88/f300196b5ab13719e0c57727f76aab4f09d2c42e9620686a21
2020-07-21T14:10:20,841 Successfully built python-bioformats
2020-07-21T14:10:26,143 Removed build tracker: '/tmp/pip-req-tracker-_noj4k6a'