2020-07-21T16:14:38,998 Created temporary directory: /tmp/pip-ephem-wheel-cache-57sa7lda 2020-07-21T16:14:39,003 Created temporary directory: /tmp/pip-req-tracker-zg32th1o 2020-07-21T16:14:39,004 Initialized build tracking at /tmp/pip-req-tracker-zg32th1o 2020-07-21T16:14:39,006 Created build tracker: /tmp/pip-req-tracker-zg32th1o 2020-07-21T16:14:39,006 Entered build tracker: /tmp/pip-req-tracker-zg32th1o 2020-07-21T16:14:39,008 Created temporary directory: /tmp/pip-wheel-p2le5nc3 2020-07-21T16:14:39,027 1 location(s) to search for versions of gillespy2: 2020-07-21T16:14:39,027 * https://pypi.org/simple/gillespy2/ 2020-07-21T16:14:39,028 Fetching project page and analyzing links: https://pypi.org/simple/gillespy2/ 2020-07-21T16:14:39,030 Getting page https://pypi.org/simple/gillespy2/ 2020-07-21T16:14:39,035 Found index url https://pypi.org/simple 2020-07-21T16:14:39,404 Skipping link: No binaries permitted for gillespy2: https://files.pythonhosted.org/packages/4f/7c/cf969b647190a481b0fe6d4dec8038b50aac1dca54d60568183169fd0dfc/gillespy2-1.0.1-py3-none-any.whl#sha256=44c3e5e38946e17f1ac4bc5db19547982a9a3760db0c70351e2e254d2202137a (from https://pypi.org/simple/gillespy2/) 2020-07-21T16:14:39,404 Skipping link: No binaries permitted for gillespy2: https://files.pythonhosted.org/packages/14/d2/153f864b374c1ba9a75365a8b12cab0d5cf1c9abb205d1671dc236dc35c2/gillespy2-1.0.2-py3-none-any.whl#sha256=0ed5d23d62ff0b6f432e4e616297b7cf0dfdcbe339964716e2f405ef575e9686 (from https://pypi.org/simple/gillespy2/) 2020-07-21T16:14:39,405 Skipping link: No binaries permitted for gillespy2: https://files.pythonhosted.org/packages/30/b2/20ac91683f66e836f1f70aeb87a4806edb0be18a6c7b6c879769013e1836/gillespy2-1.0.3-py3-none-any.whl#sha256=76e254a53144d9269612cae09dd7c9c7b5a72d519a72d177d030731356e40c25 (from https://pypi.org/simple/gillespy2/) 2020-07-21T16:14:39,406 Skipping link: No binaries permitted for gillespy2: https://files.pythonhosted.org/packages/6f/00/5ea431a005d8bd53d51eee7adae9a053a1c720880a7f8dab4698d15cea5a/gillespy2-1.0.4-py3-none-any.whl#sha256=b2156897fee1a1937880f9b9dac646de9a6b8912dfabd3d1ba7be676a53c3474 (from https://pypi.org/simple/gillespy2/) 2020-07-21T16:14:39,406 Skipping link: No binaries permitted for gillespy2: https://files.pythonhosted.org/packages/77/3d/7abb603ea023914052b17df17f0146cb2c9a61c026474e7d640a561ba23c/gillespy2-1.0.5-py3-none-any.whl#sha256=1eb3ff76ac79b216a72ba1299981b321735fb7514325bf2c9148c259ed4b2dae (from https://pypi.org/simple/gillespy2/) 2020-07-21T16:14:39,407 Skipping link: No binaries permitted for gillespy2: https://files.pythonhosted.org/packages/ca/2f/c07c6acd5044488be8178935103c38eb4075b34fdd2f1b1eff14f25e07c2/gillespy2-1.1.0-py3-none-any.whl#sha256=9dbc5bd93d132cf612a3c19b177f55f8d42520693a2d65c1e3181f5dafd8f4e4 (from https://pypi.org/simple/gillespy2/) 2020-07-21T16:14:39,408 Found link https://files.pythonhosted.org/packages/f9/95/387af07191b0d2bf4280fbb8144b46416d62dbf6c9210f926b570c8482ec/gillespy2-1.1.0.tar.gz#sha256=109f440a29d4cf076973192e5419d0874b0582ac351f2ba8689f01bfb3e4437a (from https://pypi.org/simple/gillespy2/), version: 1.1.0 2020-07-21T16:14:39,409 Skipping link: No binaries permitted for gillespy2: https://files.pythonhosted.org/packages/46/ef/6063a70fe94af0e71744940bcacd08a9b9be749947442982eddc72fb410d/gillespy2-1.1.1-py3-none-any.whl#sha256=5099c3463c652f1c08e76db9ef752928ca3ed8411130053116c73ee73414feed (from https://pypi.org/simple/gillespy2/) 2020-07-21T16:14:39,409 Found link https://files.pythonhosted.org/packages/5f/88/da1e3e73e93f992ba9460bfc801aa48e9d6e7ea224f2e1d214b90e9dc1ee/gillespy2-1.1.1.tar.gz#sha256=36828a4c306c267d44bdd8b538cd78cd79b140267aae0cf7c1b1fa60d6500dd8 (from https://pypi.org/simple/gillespy2/), version: 1.1.1 2020-07-21T16:14:39,410 Skipping link: No binaries permitted for gillespy2: https://files.pythonhosted.org/packages/01/23/ab030bba90d3eb02cd367192ee1cbb05d7b1fc3a2c3f7290fee440ccf50f/gillespy2-1.1.2-py3-none-any.whl#sha256=e45f9ed6127abdabf3c2bfe84be74d596418aaff60864bdd69adb1185b169ff1 (from https://pypi.org/simple/gillespy2/) 2020-07-21T16:14:39,411 Found link https://files.pythonhosted.org/packages/82/87/afb79c170cda93d7cd75dc20982875d5df2d9afc85eaf67bde0a1ff445fc/gillespy2-1.1.2.tar.gz#sha256=c65525dc0efa036b149ca75ab114bcc4cc1cba5e2dbcaff79ccefd977a7d44ae (from https://pypi.org/simple/gillespy2/), version: 1.1.2 2020-07-21T16:14:39,412 Skipping link: No binaries permitted for gillespy2: https://files.pythonhosted.org/packages/f2/37/2eec4c51d3f03f2a66e2ac30424d906790aeecc2343eababc8a68c6c46d5/gillespy2-1.2-py3-none-any.whl#sha256=c073782d0ea9c774b994bee32321a4ba7d301f241645da5451db98e631bd6c76 (from https://pypi.org/simple/gillespy2/) 2020-07-21T16:14:39,412 Found link https://files.pythonhosted.org/packages/00/d8/a1355dc562c2d71633bcd8ecab697a258773e91f0d0ac91624badd44b78d/gillespy2-1.2.tar.gz#sha256=cc218dcee9f3624a04ed801e3e5f1b5e72988c0a27341a53ece8f6eec6b9eb9b (from https://pypi.org/simple/gillespy2/), version: 1.2 2020-07-21T16:14:39,413 Skipping link: No binaries permitted for gillespy2: https://files.pythonhosted.org/packages/21/1c/f25bcfee885f836a1be8012ac58255569c02b1c65408642f2df06b072290/gillespy2-1.2.1-py3-none-any.whl#sha256=8d9f72d4df55eb45594255eee02d31c6a68d52c5ca8c558547beebdda39ef15f (from https://pypi.org/simple/gillespy2/) 2020-07-21T16:14:39,414 Found link https://files.pythonhosted.org/packages/bf/00/e21636643dd788919c30b50fd7bca684b7ddfab92e75c2c7aee763e113c9/gillespy2-1.2.1.tar.gz#sha256=b54f08f3e7184ca5d414408cf4808a6ecade95b114ab68730a83e7b9855f7ce9 (from https://pypi.org/simple/gillespy2/), version: 1.2.1 2020-07-21T16:14:39,415 Skipping link: No binaries permitted for gillespy2: https://files.pythonhosted.org/packages/a2/db/0006159e7f1937d4ea9a562de8ea32fbdb46f7c9259cb419c12da2da530d/gillespy2-1.2.2-py3-none-any.whl#sha256=36bf4dd93711d48d39a5e209716c7ec1c8084de865ebf13a53daf7ac7e030f90 (from https://pypi.org/simple/gillespy2/) 2020-07-21T16:14:39,415 Found link https://files.pythonhosted.org/packages/e1/4a/be1b6120606307089a9f751a9b16ff9673984ebaeb7b0171dddd98d7f9be/gillespy2-1.2.2.tar.gz#sha256=f73f182d67b412d7fa3115ca91c0fb711eba96948349139b3a003caa12567c94 (from https://pypi.org/simple/gillespy2/), version: 1.2.2 2020-07-21T16:14:39,416 Skipping link: No binaries permitted for gillespy2: https://files.pythonhosted.org/packages/b5/f9/5607f0e1df75cc680ab90ad95e769720b40281ae584e0e0815ffac89c11d/gillespy2-1.2.3-py3-none-any.whl#sha256=96a3d1f9808d959cd45ac808aff72d0d1fbc4a85f752b2fd30746f1cad430561 (from https://pypi.org/simple/gillespy2/) 2020-07-21T16:14:39,417 Found link https://files.pythonhosted.org/packages/e8/8e/3f54414dd9e9c28c7d56eaccefcb73ea2bf53806f5be3f20d6475879ced0/gillespy2-1.2.3.tar.gz#sha256=0e3518e5f34b19905bb994a0e8d3a83da35d186a2019b83238ebda0776bfdedd (from https://pypi.org/simple/gillespy2/), version: 1.2.3 2020-07-21T16:14:39,418 Skipping link: No binaries permitted for gillespy2: https://files.pythonhosted.org/packages/7f/d4/6c8047fbc003516fa406820fb1ed4f05107a70a13ac895c4b7335ecd6323/gillespy2-1.3.0-py3-none-any.whl#sha256=e3f240283c07cdcc7038b2237786e214d09930a1ace4b1fea371099c8f1f9232 (from https://pypi.org/simple/gillespy2/) 2020-07-21T16:14:39,418 Found link https://files.pythonhosted.org/packages/79/63/a807a7e7f924ffa9dbca7acd9ae334ad0746586fac65b70ff104d2fcf54c/gillespy2-1.3.0.tar.gz#sha256=cb09f699056408ceebb9e74ef2806a74301badcf76c6a7cdb20b95b1d49ee708 (from https://pypi.org/simple/gillespy2/), version: 1.3.0 2020-07-21T16:14:39,419 Skipping link: No binaries permitted for gillespy2: https://files.pythonhosted.org/packages/4c/3f/2bc9762967f53b577ac00c9f56404984454cc053381a1991ae9f44718854/gillespy2-1.3.1-py3-none-any.whl#sha256=42d8ac29fa0718f86d123ffe7b365a24746921cabea12e776448f83170fc6dfa (from https://pypi.org/simple/gillespy2/) 2020-07-21T16:14:39,420 Found link https://files.pythonhosted.org/packages/c0/e3/93e318b7f96d12a874a4eacaf281b726dcd1e6e40a29bf72457f3fdcdfb3/gillespy2-1.3.1.tar.gz#sha256=0c4125e6077c31e3ac3f9d12ce3d178d2647cf2d157d1e4b989ea51264478f80 (from https://pypi.org/simple/gillespy2/), version: 1.3.1 2020-07-21T16:14:39,420 Skipping link: No binaries permitted for gillespy2: https://files.pythonhosted.org/packages/51/ce/c21bad66a087b04e4a58214499a3811978ef1478f6fe489aa19e9b0e22a2/gillespy2-1.3.2-py3-none-any.whl#sha256=cf22f36e04326f6f5324bdebc32be6ddb68d7238be04b298747a579ff2beefbf (from https://pypi.org/simple/gillespy2/) 2020-07-21T16:14:39,421 Found link https://files.pythonhosted.org/packages/08/2c/0f8a714a41462ac0451c4a36c702481d46c71291cf804ec6c2f0415a622e/gillespy2-1.3.2.tar.gz#sha256=95cd9763faccea7d6c1ac9b2571b80a602c211b24d27aa230de44e5fdb668c01 (from https://pypi.org/simple/gillespy2/), version: 1.3.2 2020-07-21T16:14:39,422 Skipping link: No binaries permitted for gillespy2: https://files.pythonhosted.org/packages/13/12/3cd26b0f849f77f45e46896b330321ecda3cac1b4cc7e24863ec0c4be6dc/gillespy2-1.3.3-py3-none-any.whl#sha256=3f490991e9b3b426d055aaf0b5cd7cf060bc6b945fbba31a472aafa4e4630b3d (from https://pypi.org/simple/gillespy2/) 2020-07-21T16:14:39,423 Found link https://files.pythonhosted.org/packages/72/bf/3f701a7317c718cdaaaec1e9cca9c22e6c5d2016336a9d2f93540be182e4/gillespy2-1.3.3.tar.gz#sha256=8e0eff83a8e29e0fe0c72252505fe216cd8cf95feb3d3714a9309d8c81e72656 (from https://pypi.org/simple/gillespy2/), version: 1.3.3 2020-07-21T16:14:39,423 Skipping link: No binaries permitted for gillespy2: https://files.pythonhosted.org/packages/78/a1/1bb5164cde1fc65173384b97ac99addd88718187f71b81053cce81d1806f/gillespy2-1.3.4-py3-none-any.whl#sha256=1a32ecfd3808f8872ac8a6efd74010fc8554569510dfae47fbc39de9840acba6 (from https://pypi.org/simple/gillespy2/) 2020-07-21T16:14:39,424 Found link https://files.pythonhosted.org/packages/c2/d5/769abe4221234e219d357628e4f7ee3c2793af91c4a14cfa257847a658b0/gillespy2-1.3.4.tar.gz#sha256=fb75fee14275a98eec83be7a8852c8f7b400dda4758769bb4243692f451c3739 (from https://pypi.org/simple/gillespy2/), version: 1.3.4 2020-07-21T16:14:39,425 Skipping link: No binaries permitted for gillespy2: https://files.pythonhosted.org/packages/c2/c8/f1a7932fd29f1469fe9a8aebaec6ab381776d7c2e2737f60498a172fdd39/gillespy2-1.4.0-py3-none-any.whl#sha256=0bdd52f30d98b8d004a2f671504c31ab8a3279489e7d13b5303a23250516fe76 (from https://pypi.org/simple/gillespy2/) 2020-07-21T16:14:39,426 Found link https://files.pythonhosted.org/packages/40/6f/049f33511b30f433f5cd3cb085826ff29efa43e6c640c1140406bebd5b81/gillespy2-1.4.0.tar.gz#sha256=3fe1bb1ae47ddcf430e0699d01e74a0da00f05eca726ef9a53d17e081ca715c9 (from https://pypi.org/simple/gillespy2/), version: 1.4.0 2020-07-21T16:14:39,426 Skipping link: No binaries permitted for gillespy2: https://files.pythonhosted.org/packages/26/82/4b147f4237352951887eac51b814d71427fc16b30a2c8e8ee6ff066b88ee/gillespy2-1.4.1-py3-none-any.whl#sha256=9d2fe52816390f592fabe3d1c91d6e71b29a68fe772c964d846b0aec949754c9 (from https://pypi.org/simple/gillespy2/) 2020-07-21T16:14:39,427 Found link https://files.pythonhosted.org/packages/94/5a/26d5c6177400b0f5a1d8e06ab2e5878923badab8dda4400159c5977f8a66/gillespy2-1.4.1.tar.gz#sha256=f8260fb8853b915c7b478280bc86182e38d7b1a2780ecd3576b7a20653bfa521 (from https://pypi.org/simple/gillespy2/), version: 1.4.1 2020-07-21T16:14:39,428 Skipping link: No binaries permitted for gillespy2: https://files.pythonhosted.org/packages/52/2b/6af2475c557bed34d45c14217e7ef04d6b3cb20aa992e31e32b9d301000c/gillespy2-1.4.2-py3-none-any.whl#sha256=da18449c88e63a6399250e6ea1e4b8bf595f807c23d664877fa6e8e63dc518fa (from https://pypi.org/simple/gillespy2/) 2020-07-21T16:14:39,429 Found link https://files.pythonhosted.org/packages/88/9e/8789afcd068a20867f789af5bc0c78b75417c5f7fbf09f3c6c26b4caf71e/gillespy2-1.4.2.tar.gz#sha256=98c25a15050585b972894c220e8fc52d33adce115ea6481112f11caa4c82559e (from https://pypi.org/simple/gillespy2/), version: 1.4.2 2020-07-21T16:14:39,429 Skipping link: No binaries permitted for gillespy2: https://files.pythonhosted.org/packages/58/3c/b4fea9c0017f36c8f45b5fd74a50f1d1acec39d134f3862ca26b4dea2619/gillespy2-1.5.0-py3-none-any.whl#sha256=4f3e22e6aa8d3244555461124dfffb4f15d47a955317cbc70c14976823062363 (from https://pypi.org/simple/gillespy2/) 2020-07-21T16:14:39,430 Found link https://files.pythonhosted.org/packages/9c/dc/4342508f38f059a91448d7857c35f44ed3ff8e447b1787fc01f407870383/gillespy2-1.5.0.tar.gz#sha256=56c6ba6480cc33cf6a4ad301015e6afdbc1017e06c21550871f04b790634735b (from https://pypi.org/simple/gillespy2/), version: 1.5.0 2020-07-21T16:14:39,431 Skipping link: No binaries permitted for gillespy2: https://files.pythonhosted.org/packages/50/3d/1dd9fbad5938b1e8e32bf7f2f7aa8ed3b1967857b9f09a93d5d1e68ca837/gillespy2-1.5.1-py3-none-any.whl#sha256=5aabd0cb7d498302c17d102bd3c72e4d094494ef7b136bd43ced9a684a8c4361 (from https://pypi.org/simple/gillespy2/) 2020-07-21T16:14:39,431 Found link https://files.pythonhosted.org/packages/5a/7c/fac8fc3a04ca1cb0be5496a45bd864a9191b9d26ab7e2e0d1abbf1f8e743/gillespy2-1.5.1.tar.gz#sha256=254bcffd66a26003d2866712d02b652954e8f467de66bb96355ab409bcb6cd04 (from https://pypi.org/simple/gillespy2/), version: 1.5.1 2020-07-21T16:14:39,432 Skipping link: No binaries permitted for gillespy2: https://files.pythonhosted.org/packages/9e/17/be51491dc3b17f0e913cdb11d03b319e4e6a717250fbcb64f4b4c9cfa11d/gillespy2-1.5.2-py3-none-any.whl#sha256=2949418c5248c982b0e65401bed23d38be9488834777cb289a042f9f2c35dbab (from https://pypi.org/simple/gillespy2/) 2020-07-21T16:14:39,433 Found link https://files.pythonhosted.org/packages/d3/25/d9c8ce4da5de4166ebfd3667c7f2bacc5a1098d34a90c40e9f2219eaf6e1/gillespy2-1.5.2.tar.gz#sha256=a79f18227edf128ef4521f71fb279869475b135d0b29c996afbaaf494039f426 (from https://pypi.org/simple/gillespy2/), version: 1.5.2 2020-07-21T16:14:39,450 Given no hashes to check 1 links for project 'gillespy2': discarding no candidates 2020-07-21T16:14:39,452 Using version 1.5.2 (newest of versions: 1.5.2) 2020-07-21T16:14:39,459 Collecting gillespy2==1.5.2 2020-07-21T16:14:39,464 Created temporary directory: /tmp/pip-unpack-hfsibvbi 2020-07-21T16:14:39,726 Downloading gillespy2-1.5.2.tar.gz (106 kB) 2020-07-21T16:14:40,218 Added gillespy2==1.5.2 from https://files.pythonhosted.org/packages/d3/25/d9c8ce4da5de4166ebfd3667c7f2bacc5a1098d34a90c40e9f2219eaf6e1/gillespy2-1.5.2.tar.gz#sha256=a79f18227edf128ef4521f71fb279869475b135d0b29c996afbaaf494039f426 to build tracker '/tmp/pip-req-tracker-zg32th1o' 2020-07-21T16:14:40,221 Running setup.py (path:/tmp/pip-wheel-p2le5nc3/gillespy2/setup.py) egg_info for package gillespy2 2020-07-21T16:14:40,224 Created temporary directory: /tmp/pip-pip-egg-info-ypc79_2f 2020-07-21T16:14:40,225 Running command python setup.py egg_info 2020-07-21T16:14:42,604 running egg_info 2020-07-21T16:14:42,610 creating /tmp/pip-pip-egg-info-ypc79_2f/gillespy2.egg-info 2020-07-21T16:14:42,612 writing top-level names to /tmp/pip-pip-egg-info-ypc79_2f/gillespy2.egg-info/top_level.txt 2020-07-21T16:14:42,616 writing dependency_links to /tmp/pip-pip-egg-info-ypc79_2f/gillespy2.egg-info/dependency_links.txt 2020-07-21T16:14:42,619 writing /tmp/pip-pip-egg-info-ypc79_2f/gillespy2.egg-info/PKG-INFO 2020-07-21T16:14:42,625 writing requirements to /tmp/pip-pip-egg-info-ypc79_2f/gillespy2.egg-info/requires.txt 2020-07-21T16:14:42,629 writing manifest file '/tmp/pip-pip-egg-info-ypc79_2f/gillespy2.egg-info/SOURCES.txt' 2020-07-21T16:14:42,996 reading manifest file '/tmp/pip-pip-egg-info-ypc79_2f/gillespy2.egg-info/SOURCES.txt' 2020-07-21T16:14:42,999 reading manifest template 'MANIFEST.in' 2020-07-21T16:14:43,006 warning: no files found matching 'gillespy2/solvers/cpp/c_base/MakeFile' 2020-07-21T16:14:43,019 writing manifest file '/tmp/pip-pip-egg-info-ypc79_2f/gillespy2.egg-info/SOURCES.txt' 2020-07-21T16:14:43,181 Source in /tmp/pip-wheel-p2le5nc3/gillespy2 has version 1.5.2, which satisfies requirement gillespy2==1.5.2 from https://files.pythonhosted.org/packages/d3/25/d9c8ce4da5de4166ebfd3667c7f2bacc5a1098d34a90c40e9f2219eaf6e1/gillespy2-1.5.2.tar.gz#sha256=a79f18227edf128ef4521f71fb279869475b135d0b29c996afbaaf494039f426 2020-07-21T16:14:43,183 Removed gillespy2==1.5.2 from https://files.pythonhosted.org/packages/d3/25/d9c8ce4da5de4166ebfd3667c7f2bacc5a1098d34a90c40e9f2219eaf6e1/gillespy2-1.5.2.tar.gz#sha256=a79f18227edf128ef4521f71fb279869475b135d0b29c996afbaaf494039f426 from build tracker '/tmp/pip-req-tracker-zg32th1o' 2020-07-21T16:14:43,191 Building wheels for collected packages: gillespy2 2020-07-21T16:14:43,200 Created temporary directory: /tmp/pip-wheel-xbfq548q 2020-07-21T16:14:43,201 Building wheel for gillespy2 (setup.py): started 2020-07-21T16:14:43,202 Destination directory: /tmp/pip-wheel-xbfq548q 2020-07-21T16:14:43,202 Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-p2le5nc3/gillespy2/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-p2le5nc3/gillespy2/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-xbfq548q 2020-07-21T16:14:45,553 running bdist_wheel 2020-07-21T16:14:45,560 running build 2020-07-21T16:14:45,561 running build_py 2020-07-21T16:14:45,875 creating build 2020-07-21T16:14:45,875 creating build/lib 2020-07-21T16:14:45,877 creating build/lib/gillespy2 2020-07-21T16:14:45,880 copying gillespy2/__init__.py -> build/lib/gillespy2 2020-07-21T16:14:45,884 copying gillespy2/__version__.py -> build/lib/gillespy2 2020-07-21T16:14:45,890 creating build/lib/gillespy2/core 2020-07-21T16:14:45,892 copying gillespy2/core/functiondefinition.py -> build/lib/gillespy2/core 2020-07-21T16:14:45,897 copying gillespy2/core/gillespyError.py -> build/lib/gillespy2/core 2020-07-21T16:14:45,902 copying gillespy2/core/assignmentrule.py -> build/lib/gillespy2/core 2020-07-21T16:14:45,908 copying gillespy2/core/raterule.py -> build/lib/gillespy2/core 2020-07-21T16:14:45,913 copying gillespy2/core/species.py -> build/lib/gillespy2/core 2020-07-21T16:14:45,920 copying gillespy2/core/parameter.py -> build/lib/gillespy2/core 2020-07-21T16:14:45,926 copying gillespy2/core/liveGraphing.py -> build/lib/gillespy2/core 2020-07-21T16:14:45,932 copying gillespy2/core/__init__.py -> build/lib/gillespy2/core 2020-07-21T16:14:45,938 copying gillespy2/core/results.py -> build/lib/gillespy2/core 2020-07-21T16:14:45,947 copying gillespy2/core/sortableobject.py -> build/lib/gillespy2/core 2020-07-21T16:14:45,951 copying gillespy2/core/model.py -> build/lib/gillespy2/core 2020-07-21T16:14:45,961 copying gillespy2/core/gillespySolver.py -> build/lib/gillespy2/core 2020-07-21T16:14:45,969 copying gillespy2/core/reaction.py -> build/lib/gillespy2/core 2020-07-21T16:14:45,978 copying gillespy2/core/events.py -> build/lib/gillespy2/core 2020-07-21T16:14:45,986 creating build/lib/gillespy2/sbml 2020-07-21T16:14:45,989 copying gillespy2/sbml/__init__.py -> build/lib/gillespy2/sbml 2020-07-21T16:14:45,993 copying gillespy2/sbml/SBMLimport.py -> build/lib/gillespy2/sbml 2020-07-21T16:14:46,001 creating build/lib/gillespy2/solvers 2020-07-21T16:14:46,005 copying gillespy2/solvers/__init__.py -> build/lib/gillespy2/solvers 2020-07-21T16:14:46,014 creating build/lib/gillespy2/solvers/stochkit 2020-07-21T16:14:46,018 copying gillespy2/solvers/stochkit/__init__.py -> build/lib/gillespy2/solvers/stochkit 2020-07-21T16:14:46,024 copying gillespy2/solvers/stochkit/stochkit_solvers.py -> build/lib/gillespy2/solvers/stochkit 2020-07-21T16:14:46,032 creating build/lib/gillespy2/solvers/cython 2020-07-21T16:14:46,035 copying gillespy2/solvers/cython/__init__.py -> build/lib/gillespy2/solvers/cython 2020-07-21T16:14:46,042 creating build/lib/gillespy2/solvers/numpy 2020-07-21T16:14:46,046 copying gillespy2/solvers/numpy/ssa_solver.py -> build/lib/gillespy2/solvers/numpy 2020-07-21T16:14:46,055 copying gillespy2/solvers/numpy/tau_hybrid_solver.py -> build/lib/gillespy2/solvers/numpy 2020-07-21T16:14:46,067 copying gillespy2/solvers/numpy/tau_leaping_solver.py -> build/lib/gillespy2/solvers/numpy 2020-07-21T16:14:46,076 copying gillespy2/solvers/numpy/__init__.py -> build/lib/gillespy2/solvers/numpy 2020-07-21T16:14:46,083 copying gillespy2/solvers/numpy/basic_tau_hybrid_solver.py -> build/lib/gillespy2/solvers/numpy 2020-07-21T16:14:46,090 copying gillespy2/solvers/numpy/basic_tau_leaping_solver.py -> build/lib/gillespy2/solvers/numpy 2020-07-21T16:14:46,097 copying gillespy2/solvers/numpy/basic_ode_solver.py -> build/lib/gillespy2/solvers/numpy 2020-07-21T16:14:46,104 copying gillespy2/solvers/numpy/ode_solver.py -> build/lib/gillespy2/solvers/numpy 2020-07-21T16:14:46,111 creating build/lib/gillespy2/solvers/cpp 2020-07-21T16:14:46,114 copying gillespy2/solvers/cpp/__init__.py -> build/lib/gillespy2/solvers/cpp 2020-07-21T16:14:46,120 copying gillespy2/solvers/cpp/example_models.py -> build/lib/gillespy2/solvers/cpp 2020-07-21T16:14:46,125 copying gillespy2/solvers/cpp/ssa_c_solver.py -> build/lib/gillespy2/solvers/cpp 2020-07-21T16:14:46,131 copying gillespy2/solvers/cpp/variable_ssa_c_solver.py -> build/lib/gillespy2/solvers/cpp 2020-07-21T16:14:46,139 creating build/lib/gillespy2/solvers/utilities 2020-07-21T16:14:46,143 copying gillespy2/solvers/utilities/cpp_support_test.py -> build/lib/gillespy2/solvers/utilities 2020-07-21T16:14:46,149 copying gillespy2/solvers/utilities/__init__.py -> build/lib/gillespy2/solvers/utilities 2020-07-21T16:14:46,155 copying gillespy2/solvers/utilities/solverutils.py -> build/lib/gillespy2/solvers/utilities 2020-07-21T16:14:46,165 copying gillespy2/solvers/utilities/Tau.py -> build/lib/gillespy2/solvers/utilities 2020-07-21T16:14:46,170 running egg_info 2020-07-21T16:14:46,177 writing top-level names to gillespy2.egg-info/top_level.txt 2020-07-21T16:14:46,180 writing requirements to gillespy2.egg-info/requires.txt 2020-07-21T16:14:46,185 writing dependency_links to gillespy2.egg-info/dependency_links.txt 2020-07-21T16:14:46,188 writing gillespy2.egg-info/PKG-INFO 2020-07-21T16:14:46,222 reading manifest file 'gillespy2.egg-info/SOURCES.txt' 2020-07-21T16:14:46,233 reading manifest template 'MANIFEST.in' 2020-07-21T16:14:46,240 warning: no files found matching 'gillespy2/solvers/cpp/c_base/MakeFile' 2020-07-21T16:14:46,257 writing manifest file 'gillespy2.egg-info/SOURCES.txt' 2020-07-21T16:14:46,268 copying gillespy2/solvers/cython/cython_ssa_solver.pyx -> build/lib/gillespy2/solvers/cython 2020-07-21T16:14:46,275 creating build/lib/gillespy2/solvers/cpp/c_base 2020-07-21T16:14:46,278 copying gillespy2/solvers/cpp/c_base/SimulationTemplate.cpp -> build/lib/gillespy2/solvers/cpp/c_base 2020-07-21T16:14:46,284 copying gillespy2/solvers/cpp/c_base/VariableSimulationTemplate.cpp -> build/lib/gillespy2/solvers/cpp/c_base 2020-07-21T16:14:46,290 copying gillespy2/solvers/cpp/c_base/makefile -> build/lib/gillespy2/solvers/cpp/c_base 2020-07-21T16:14:46,295 copying gillespy2/solvers/cpp/c_base/model.cpp -> build/lib/gillespy2/solvers/cpp/c_base 2020-07-21T16:14:46,302 copying gillespy2/solvers/cpp/c_base/model.h -> build/lib/gillespy2/solvers/cpp/c_base 2020-07-21T16:14:46,308 copying gillespy2/solvers/cpp/c_base/ssa.cpp -> build/lib/gillespy2/solvers/cpp/c_base 2020-07-21T16:14:46,314 copying gillespy2/solvers/cpp/c_base/ssa.h -> build/lib/gillespy2/solvers/cpp/c_base 2020-07-21T16:14:46,333 installing to build/bdist.linux-armv7l/wheel 2020-07-21T16:14:46,334 running install 2020-07-21T16:14:46,337 running install_lib 2020-07-21T16:14:46,346 creating build/bdist.linux-armv7l 2020-07-21T16:14:46,348 creating build/bdist.linux-armv7l/wheel 2020-07-21T16:14:46,352 creating build/bdist.linux-armv7l/wheel/gillespy2 2020-07-21T16:14:46,357 creating build/bdist.linux-armv7l/wheel/gillespy2/core 2020-07-21T16:14:46,360 copying build/lib/gillespy2/core/functiondefinition.py -> build/bdist.linux-armv7l/wheel/gillespy2/core 2020-07-21T16:14:46,365 copying build/lib/gillespy2/core/gillespyError.py -> build/bdist.linux-armv7l/wheel/gillespy2/core 2020-07-21T16:14:46,370 copying build/lib/gillespy2/core/assignmentrule.py -> build/bdist.linux-armv7l/wheel/gillespy2/core 2020-07-21T16:14:46,375 copying build/lib/gillespy2/core/raterule.py -> build/bdist.linux-armv7l/wheel/gillespy2/core 2020-07-21T16:14:46,380 copying build/lib/gillespy2/core/species.py -> build/bdist.linux-armv7l/wheel/gillespy2/core 2020-07-21T16:14:46,385 copying build/lib/gillespy2/core/parameter.py -> build/bdist.linux-armv7l/wheel/gillespy2/core 2020-07-21T16:14:46,390 copying build/lib/gillespy2/core/liveGraphing.py -> build/bdist.linux-armv7l/wheel/gillespy2/core 2020-07-21T16:14:46,396 copying build/lib/gillespy2/core/__init__.py -> build/bdist.linux-armv7l/wheel/gillespy2/core 2020-07-21T16:14:46,401 copying build/lib/gillespy2/core/results.py -> build/bdist.linux-armv7l/wheel/gillespy2/core 2020-07-21T16:14:46,409 copying build/lib/gillespy2/core/sortableobject.py -> build/bdist.linux-armv7l/wheel/gillespy2/core 2020-07-21T16:14:46,414 copying build/lib/gillespy2/core/model.py -> build/bdist.linux-armv7l/wheel/gillespy2/core 2020-07-21T16:14:46,424 copying build/lib/gillespy2/core/gillespySolver.py -> build/bdist.linux-armv7l/wheel/gillespy2/core 2020-07-21T16:14:46,429 copying build/lib/gillespy2/core/reaction.py -> build/bdist.linux-armv7l/wheel/gillespy2/core 2020-07-21T16:14:46,435 copying build/lib/gillespy2/core/events.py -> build/bdist.linux-armv7l/wheel/gillespy2/core 2020-07-21T16:14:46,441 copying build/lib/gillespy2/__init__.py -> build/bdist.linux-armv7l/wheel/gillespy2 2020-07-21T16:14:46,447 creating build/bdist.linux-armv7l/wheel/gillespy2/sbml 2020-07-21T16:14:46,450 copying build/lib/gillespy2/sbml/__init__.py -> build/bdist.linux-armv7l/wheel/gillespy2/sbml 2020-07-21T16:14:46,455 copying build/lib/gillespy2/sbml/SBMLimport.py -> build/bdist.linux-armv7l/wheel/gillespy2/sbml 2020-07-21T16:14:46,464 creating build/bdist.linux-armv7l/wheel/gillespy2/solvers 2020-07-21T16:14:46,468 creating build/bdist.linux-armv7l/wheel/gillespy2/solvers/stochkit 2020-07-21T16:14:46,471 copying build/lib/gillespy2/solvers/stochkit/__init__.py -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/stochkit 2020-07-21T16:14:46,476 copying build/lib/gillespy2/solvers/stochkit/stochkit_solvers.py -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/stochkit 2020-07-21T16:14:46,483 copying build/lib/gillespy2/solvers/__init__.py -> build/bdist.linux-armv7l/wheel/gillespy2/solvers 2020-07-21T16:14:46,489 creating build/bdist.linux-armv7l/wheel/gillespy2/solvers/cython 2020-07-21T16:14:46,492 copying build/lib/gillespy2/solvers/cython/__init__.py -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cython 2020-07-21T16:14:46,497 copying build/lib/gillespy2/solvers/cython/cython_ssa_solver.pyx -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cython 2020-07-21T16:14:46,504 creating build/bdist.linux-armv7l/wheel/gillespy2/solvers/numpy 2020-07-21T16:14:46,507 copying build/lib/gillespy2/solvers/numpy/ssa_solver.py -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/numpy 2020-07-21T16:14:46,514 copying build/lib/gillespy2/solvers/numpy/tau_hybrid_solver.py -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/numpy 2020-07-21T16:14:46,524 copying build/lib/gillespy2/solvers/numpy/tau_leaping_solver.py -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/numpy 2020-07-21T16:14:46,531 copying build/lib/gillespy2/solvers/numpy/__init__.py -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/numpy 2020-07-21T16:14:46,536 copying build/lib/gillespy2/solvers/numpy/basic_tau_hybrid_solver.py -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/numpy 2020-07-21T16:14:46,541 copying build/lib/gillespy2/solvers/numpy/basic_tau_leaping_solver.py -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/numpy 2020-07-21T16:14:46,546 copying build/lib/gillespy2/solvers/numpy/basic_ode_solver.py -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/numpy 2020-07-21T16:14:46,551 copying build/lib/gillespy2/solvers/numpy/ode_solver.py -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/numpy 2020-07-21T16:14:46,560 creating build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp 2020-07-21T16:14:46,565 creating build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base 2020-07-21T16:14:46,570 copying build/lib/gillespy2/solvers/cpp/c_base/VariableSimulationTemplate.cpp -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base 2020-07-21T16:14:46,577 copying build/lib/gillespy2/solvers/cpp/c_base/ssa.cpp -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base 2020-07-21T16:14:46,582 copying build/lib/gillespy2/solvers/cpp/c_base/ssa.h -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base 2020-07-21T16:14:46,587 copying build/lib/gillespy2/solvers/cpp/c_base/makefile -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base 2020-07-21T16:14:46,592 copying build/lib/gillespy2/solvers/cpp/c_base/model.cpp -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base 2020-07-21T16:14:46,598 copying build/lib/gillespy2/solvers/cpp/c_base/model.h -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base 2020-07-21T16:14:46,605 copying build/lib/gillespy2/solvers/cpp/c_base/SimulationTemplate.cpp -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp/c_base 2020-07-21T16:14:46,613 copying build/lib/gillespy2/solvers/cpp/__init__.py -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp 2020-07-21T16:14:46,619 copying build/lib/gillespy2/solvers/cpp/example_models.py -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp 2020-07-21T16:14:46,624 copying build/lib/gillespy2/solvers/cpp/ssa_c_solver.py -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp 2020-07-21T16:14:46,630 copying build/lib/gillespy2/solvers/cpp/variable_ssa_c_solver.py -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/cpp 2020-07-21T16:14:46,639 creating build/bdist.linux-armv7l/wheel/gillespy2/solvers/utilities 2020-07-21T16:14:46,643 copying build/lib/gillespy2/solvers/utilities/cpp_support_test.py -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/utilities 2020-07-21T16:14:46,651 copying build/lib/gillespy2/solvers/utilities/__init__.py -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/utilities 2020-07-21T16:14:46,657 copying build/lib/gillespy2/solvers/utilities/solverutils.py -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/utilities 2020-07-21T16:14:46,664 copying build/lib/gillespy2/solvers/utilities/Tau.py -> build/bdist.linux-armv7l/wheel/gillespy2/solvers/utilities 2020-07-21T16:14:46,670 copying build/lib/gillespy2/__version__.py -> build/bdist.linux-armv7l/wheel/gillespy2 2020-07-21T16:14:46,674 running install_egg_info 2020-07-21T16:14:46,682 Copying gillespy2.egg-info to build/bdist.linux-armv7l/wheel/gillespy2-1.5.2-py3.5.egg-info 2020-07-21T16:14:46,712 running install_scripts 2020-07-21T16:14:46,791 creating build/bdist.linux-armv7l/wheel/gillespy2-1.5.2.dist-info/WHEEL 2020-07-21T16:14:47,260 Building wheel for gillespy2 (setup.py): finished with status 'done' 2020-07-21T16:14:47,266 Created wheel for gillespy2: filename=gillespy2-1.5.2-py3-none-any.whl size=103884 sha256=5f3208d677e7906dcee43f8291e950b4c42ab36fe03e2b25ed4216164d014222 2020-07-21T16:14:47,267 Stored in directory: /tmp/pip-ephem-wheel-cache-57sa7lda/wheels/88/39/6f/eaf0ebe222a542b52fe2fbc0bd13b251ad3559026d45a49cc5 2020-07-21T16:14:47,271 Successfully built gillespy2 2020-07-21T16:14:47,296 Removed build tracker: '/tmp/pip-req-tracker-zg32th1o'