2020-07-21T17:02:58,569 Created temporary directory: /tmp/pip-ephem-wheel-cache-sjfl4vpu
2020-07-21T17:02:58,573 Created temporary directory: /tmp/pip-req-tracker-86ujbbok
2020-07-21T17:02:58,574 Initialized build tracking at /tmp/pip-req-tracker-86ujbbok
2020-07-21T17:02:58,575 Created build tracker: /tmp/pip-req-tracker-86ujbbok
2020-07-21T17:02:58,575 Entered build tracker: /tmp/pip-req-tracker-86ujbbok
2020-07-21T17:02:58,577 Created temporary directory: /tmp/pip-wheel-0d6xjdxc
2020-07-21T17:02:58,594 1 location(s) to search for versions of single-cell-portal:
2020-07-21T17:02:58,594 * https://pypi.org/simple/single-cell-portal/
2020-07-21T17:02:58,595 Fetching project page and analyzing links: https://pypi.org/simple/single-cell-portal/
2020-07-21T17:02:58,596 Getting page https://pypi.org/simple/single-cell-portal/
2020-07-21T17:02:58,598 Found index url https://pypi.org/simple
2020-07-21T17:02:58,802   Found link https://files.pythonhosted.org/packages/ee/4f/950d61fb08a24ddea2bedfd7923e10a7e3fa09c51496285e9196625a2b0e/single-cell-portal-0.1.tar.gz#sha256=1876f005daaff8f0a4c63e6f1542f5f1fcd98cb8fddc66a7c68c9986972941f2 (from https://pypi.org/simple/single-cell-portal/) (requires-python:>=3.7), version: 0.1
2020-07-21T17:02:58,803   Skipping link: No binaries permitted for single-cell-portal: https://files.pythonhosted.org/packages/6d/b2/eb578693343a685cc3896d6cf666fad2ea16e18199883dc173baca0b5a17/single_cell_portal-0.1-py3-none-any.whl#sha256=032ffeb440cc244913f93033406fe7b819adff12b38c3e713cd890e1f0de4240 (from https://pypi.org/simple/single-cell-portal/) (requires-python:>=3.7)
2020-07-21T17:02:58,804   Found link https://files.pythonhosted.org/packages/33/d8/c92c823bddbb2b68695fcdff7a5bf4ee6b6807b587ccc097212f37d986ba/single-cell-portal-0.1.1.tar.gz#sha256=2979759d46ea835cfea1ae77d43469a4acea9a8971a2b88fc83150a439aa4b89 (from https://pypi.org/simple/single-cell-portal/) (requires-python:>=3.7), version: 0.1.1
2020-07-21T17:02:58,805   Skipping link: No binaries permitted for single-cell-portal: https://files.pythonhosted.org/packages/af/3e/457e54040285054993fb97a1c584ad1a59f51c2ada5d7a3d25b120de961f/single_cell_portal-0.1.1-py3-none-any.whl#sha256=7253d25ddaaa2ed0f5ee8c4d05274f6752b88af0fb8bc188e2dbc880e0fa5e7c (from https://pypi.org/simple/single-cell-portal/) (requires-python:>=3.7)
2020-07-21T17:02:58,812 Given no hashes to check 1 links for project 'single-cell-portal': discarding no candidates
2020-07-21T17:02:58,813 Using version 0.1.1 (newest of versions: 0.1.1)
2020-07-21T17:02:58,819 Collecting single-cell-portal==0.1.1
2020-07-21T17:02:58,822   Created temporary directory: /tmp/pip-unpack-zskqy0cb
2020-07-21T17:02:59,030   Downloading single-cell-portal-0.1.1.tar.gz (46 kB)
2020-07-21T17:02:59,248   Added single-cell-portal==0.1.1 from https://files.pythonhosted.org/packages/33/d8/c92c823bddbb2b68695fcdff7a5bf4ee6b6807b587ccc097212f37d986ba/single-cell-portal-0.1.1.tar.gz#sha256=2979759d46ea835cfea1ae77d43469a4acea9a8971a2b88fc83150a439aa4b89 to build tracker '/tmp/pip-req-tracker-86ujbbok'
2020-07-21T17:02:59,250     Running setup.py (path:/tmp/pip-wheel-0d6xjdxc/single-cell-portal/setup.py) egg_info for package single-cell-portal
2020-07-21T17:02:59,251     Created temporary directory: /tmp/pip-pip-egg-info-t7nrlexf
2020-07-21T17:02:59,252     Running command python setup.py egg_info
2020-07-21T17:03:01,175     running egg_info
2020-07-21T17:03:01,181     creating /tmp/pip-pip-egg-info-t7nrlexf/single_cell_portal.egg-info
2020-07-21T17:03:01,203     writing /tmp/pip-pip-egg-info-t7nrlexf/single_cell_portal.egg-info/PKG-INFO
2020-07-21T17:03:01,208     writing dependency_links to /tmp/pip-pip-egg-info-t7nrlexf/single_cell_portal.egg-info/dependency_links.txt
2020-07-21T17:03:01,212     writing entry points to /tmp/pip-pip-egg-info-t7nrlexf/single_cell_portal.egg-info/entry_points.txt
2020-07-21T17:03:01,215     writing requirements to /tmp/pip-pip-egg-info-t7nrlexf/single_cell_portal.egg-info/requires.txt
2020-07-21T17:03:01,217     writing top-level names to /tmp/pip-pip-egg-info-t7nrlexf/single_cell_portal.egg-info/top_level.txt
2020-07-21T17:03:01,221     writing manifest file '/tmp/pip-pip-egg-info-t7nrlexf/single_cell_portal.egg-info/SOURCES.txt'
2020-07-21T17:03:01,556     reading manifest file '/tmp/pip-pip-egg-info-t7nrlexf/single_cell_portal.egg-info/SOURCES.txt'
2020-07-21T17:03:01,565     writing manifest file '/tmp/pip-pip-egg-info-t7nrlexf/single_cell_portal.egg-info/SOURCES.txt'
2020-07-21T17:03:01,702   Source in /tmp/pip-wheel-0d6xjdxc/single-cell-portal has version 0.1.1, which satisfies requirement single-cell-portal==0.1.1 from https://files.pythonhosted.org/packages/33/d8/c92c823bddbb2b68695fcdff7a5bf4ee6b6807b587ccc097212f37d986ba/single-cell-portal-0.1.1.tar.gz#sha256=2979759d46ea835cfea1ae77d43469a4acea9a8971a2b88fc83150a439aa4b89
2020-07-21T17:03:01,704   Removed single-cell-portal==0.1.1 from https://files.pythonhosted.org/packages/33/d8/c92c823bddbb2b68695fcdff7a5bf4ee6b6807b587ccc097212f37d986ba/single-cell-portal-0.1.1.tar.gz#sha256=2979759d46ea835cfea1ae77d43469a4acea9a8971a2b88fc83150a439aa4b89 from build tracker '/tmp/pip-req-tracker-86ujbbok'
2020-07-21T17:03:01,708 Building wheels for collected packages: single-cell-portal
2020-07-21T17:03:01,719   Created temporary directory: /tmp/pip-wheel-7ot1bcs_
2020-07-21T17:03:01,720   Building wheel for single-cell-portal (setup.py): started
2020-07-21T17:03:01,721   Destination directory: /tmp/pip-wheel-7ot1bcs_
2020-07-21T17:03:01,721   Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-0d6xjdxc/single-cell-portal/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-0d6xjdxc/single-cell-portal/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-7ot1bcs_
2020-07-21T17:03:03,574   running bdist_wheel
2020-07-21T17:03:03,589   running build
2020-07-21T17:03:03,590   running build_py
2020-07-21T17:03:03,866   creating build
2020-07-21T17:03:03,868   creating build/lib
2020-07-21T17:03:03,870   creating build/lib/scripts
2020-07-21T17:03:03,874   copying scripts/scp_api.py -> build/lib/scripts
2020-07-21T17:03:03,882   copying scripts/__init__.py -> build/lib/scripts
2020-07-21T17:03:03,887   copying scripts/scan_study_descriptions_species.py -> build/lib/scripts
2020-07-21T17:03:03,892   copying scripts/authenticate.py -> build/lib/scripts
2020-07-21T17:03:03,897   copying scripts/scan_study_descriptions.py -> build/lib/scripts
2020-07-21T17:03:03,904   copying scripts/Commandline.py -> build/lib/scripts
2020-07-21T17:03:03,911   copying scripts/swap_column_values.py -> build/lib/scripts
2020-07-21T17:03:03,918   copying scripts/PortalFiles.py -> build/lib/scripts
2020-07-21T17:03:03,926   copying scripts/orchestra_methods.py -> build/lib/scripts
2020-07-21T17:03:03,933   copying scripts/Tester.py -> build/lib/scripts
2020-07-21T17:03:03,938   copying scripts/scan_study_descriptions_lpp.py -> build/lib/scripts
2020-07-21T17:03:03,944   copying scripts/manage_study.py -> build/lib/scripts
2020-07-21T17:03:03,952   copying scripts/cell_ranger_to_scp.py -> build/lib/scripts
2020-07-21T17:03:03,959   copying scripts/extract_public_study_metadata.py -> build/lib/scripts
2020-07-21T17:03:03,964   copying scripts/SortSparseMatrix.py -> build/lib/scripts
2020-07-21T17:03:03,970   copying scripts/scan_study_descriptions_lpp_accessionOnly.py -> build/lib/scripts
2020-07-21T17:03:03,976   copying scripts/scp_to_infercnv.py -> build/lib/scripts
2020-07-21T17:03:03,982   copying scripts/verify_portal_file.py -> build/lib/scripts
2020-07-21T17:03:03,989   copying scripts/extract_study_descriptions.py -> build/lib/scripts
2020-07-21T17:03:03,995   copying scripts/print_study_descriptions_species.py -> build/lib/scripts
2020-07-21T17:03:04,000   copying scripts/PortalFilesTester.py -> build/lib/scripts
2020-07-21T17:03:04,010   copying scripts/cli_parser.py -> build/lib/scripts
2020-07-21T17:03:04,016   copying scripts/print_study_descriptions_lpp.py -> build/lib/scripts
2020-07-21T17:03:04,022   creating build/lib/scripts/ideogram
2020-07-21T17:03:04,024   copying scripts/ideogram/__init__.py -> build/lib/scripts/ideogram
2020-07-21T17:03:04,030   copying scripts/ideogram/cluster_groups.py -> build/lib/scripts/ideogram
2020-07-21T17:03:04,035   copying scripts/ideogram/matrix_to_ideogram_annots.py -> build/lib/scripts/ideogram
2020-07-21T17:03:04,051   installing to build/bdist.linux-armv7l/wheel
2020-07-21T17:03:04,052   running install
2020-07-21T17:03:04,053   running install_lib
2020-07-21T17:03:04,061   creating build/bdist.linux-armv7l
2020-07-21T17:03:04,061   creating build/bdist.linux-armv7l/wheel
2020-07-21T17:03:04,066   creating build/bdist.linux-armv7l/wheel/scripts
2020-07-21T17:03:04,068   copying build/lib/scripts/scp_api.py -> build/bdist.linux-armv7l/wheel/scripts
2020-07-21T17:03:04,076   copying build/lib/scripts/__init__.py -> build/bdist.linux-armv7l/wheel/scripts
2020-07-21T17:03:04,079   copying build/lib/scripts/scan_study_descriptions_species.py -> build/bdist.linux-armv7l/wheel/scripts
2020-07-21T17:03:04,085   copying build/lib/scripts/authenticate.py -> build/bdist.linux-armv7l/wheel/scripts
2020-07-21T17:03:04,092   creating build/bdist.linux-armv7l/wheel/scripts/ideogram
2020-07-21T17:03:04,094   copying build/lib/scripts/ideogram/__init__.py -> build/bdist.linux-armv7l/wheel/scripts/ideogram
2020-07-21T17:03:04,099   copying build/lib/scripts/ideogram/cluster_groups.py -> build/bdist.linux-armv7l/wheel/scripts/ideogram
2020-07-21T17:03:04,105   copying build/lib/scripts/ideogram/matrix_to_ideogram_annots.py -> build/bdist.linux-armv7l/wheel/scripts/ideogram
2020-07-21T17:03:04,112   copying build/lib/scripts/scan_study_descriptions.py -> build/bdist.linux-armv7l/wheel/scripts
2020-07-21T17:03:04,117   copying build/lib/scripts/Commandline.py -> build/bdist.linux-armv7l/wheel/scripts
2020-07-21T17:03:04,123   copying build/lib/scripts/swap_column_values.py -> build/bdist.linux-armv7l/wheel/scripts
2020-07-21T17:03:04,128   copying build/lib/scripts/PortalFiles.py -> build/bdist.linux-armv7l/wheel/scripts
2020-07-21T17:03:04,138   copying build/lib/scripts/orchestra_methods.py -> build/bdist.linux-armv7l/wheel/scripts
2020-07-21T17:03:04,145   copying build/lib/scripts/Tester.py -> build/bdist.linux-armv7l/wheel/scripts
2020-07-21T17:03:04,150   copying build/lib/scripts/scan_study_descriptions_lpp.py -> build/bdist.linux-armv7l/wheel/scripts
2020-07-21T17:03:04,156   copying build/lib/scripts/manage_study.py -> build/bdist.linux-armv7l/wheel/scripts
2020-07-21T17:03:04,163   copying build/lib/scripts/cell_ranger_to_scp.py -> build/bdist.linux-armv7l/wheel/scripts
2020-07-21T17:03:04,170   copying build/lib/scripts/extract_public_study_metadata.py -> build/bdist.linux-armv7l/wheel/scripts
2020-07-21T17:03:04,175   copying build/lib/scripts/SortSparseMatrix.py -> build/bdist.linux-armv7l/wheel/scripts
2020-07-21T17:03:04,181   copying build/lib/scripts/scan_study_descriptions_lpp_accessionOnly.py -> build/bdist.linux-armv7l/wheel/scripts
2020-07-21T17:03:04,186   copying build/lib/scripts/scp_to_infercnv.py -> build/bdist.linux-armv7l/wheel/scripts
2020-07-21T17:03:04,192   copying build/lib/scripts/verify_portal_file.py -> build/bdist.linux-armv7l/wheel/scripts
2020-07-21T17:03:04,200   copying build/lib/scripts/extract_study_descriptions.py -> build/bdist.linux-armv7l/wheel/scripts
2020-07-21T17:03:04,205   copying build/lib/scripts/print_study_descriptions_species.py -> build/bdist.linux-armv7l/wheel/scripts
2020-07-21T17:03:04,210   copying build/lib/scripts/PortalFilesTester.py -> build/bdist.linux-armv7l/wheel/scripts
2020-07-21T17:03:04,222   copying build/lib/scripts/cli_parser.py -> build/bdist.linux-armv7l/wheel/scripts
2020-07-21T17:03:04,229   copying build/lib/scripts/print_study_descriptions_lpp.py -> build/bdist.linux-armv7l/wheel/scripts
2020-07-21T17:03:04,234   running install_egg_info
2020-07-21T17:03:04,275   running egg_info
2020-07-21T17:03:04,288   writing single_cell_portal.egg-info/PKG-INFO
2020-07-21T17:03:04,292   writing dependency_links to single_cell_portal.egg-info/dependency_links.txt
2020-07-21T17:03:04,295   writing entry points to single_cell_portal.egg-info/entry_points.txt
2020-07-21T17:03:04,298   writing requirements to single_cell_portal.egg-info/requires.txt
2020-07-21T17:03:04,300   writing top-level names to single_cell_portal.egg-info/top_level.txt
2020-07-21T17:03:04,312   reading manifest file 'single_cell_portal.egg-info/SOURCES.txt'
2020-07-21T17:03:04,323   writing manifest file 'single_cell_portal.egg-info/SOURCES.txt'
2020-07-21T17:03:04,326   Copying single_cell_portal.egg-info to build/bdist.linux-armv7l/wheel/single_cell_portal-0.1.1-py3.7.egg-info
2020-07-21T17:03:04,355   running install_scripts
2020-07-21T17:03:04,506   creating build/bdist.linux-armv7l/wheel/single_cell_portal-0.1.1.dist-info/WHEEL
2020-07-21T17:03:04,511   creating '/tmp/pip-wheel-7ot1bcs_/single_cell_portal-0.1.1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2020-07-21T17:03:04,517   adding 'scripts/Commandline.py'
2020-07-21T17:03:04,524   adding 'scripts/PortalFiles.py'
2020-07-21T17:03:04,531   adding 'scripts/PortalFilesTester.py'
2020-07-21T17:03:04,534   adding 'scripts/SortSparseMatrix.py'
2020-07-21T17:03:04,536   adding 'scripts/Tester.py'
2020-07-21T17:03:04,538   adding 'scripts/__init__.py'
2020-07-21T17:03:04,541   adding 'scripts/authenticate.py'
2020-07-21T17:03:04,544   adding 'scripts/cell_ranger_to_scp.py'
2020-07-21T17:03:04,547   adding 'scripts/cli_parser.py'
2020-07-21T17:03:04,550   adding 'scripts/extract_public_study_metadata.py'
2020-07-21T17:03:04,552   adding 'scripts/extract_study_descriptions.py'
2020-07-21T17:03:04,556   adding 'scripts/manage_study.py'
2020-07-21T17:03:04,561   adding 'scripts/orchestra_methods.py'
2020-07-21T17:03:04,564   adding 'scripts/print_study_descriptions_lpp.py'
2020-07-21T17:03:04,566   adding 'scripts/print_study_descriptions_species.py'
2020-07-21T17:03:04,569   adding 'scripts/scan_study_descriptions.py'
2020-07-21T17:03:04,571   adding 'scripts/scan_study_descriptions_lpp.py'
2020-07-21T17:03:04,574   adding 'scripts/scan_study_descriptions_lpp_accessionOnly.py'
2020-07-21T17:03:04,576   adding 'scripts/scan_study_descriptions_species.py'
2020-07-21T17:03:04,583   adding 'scripts/scp_api.py'
2020-07-21T17:03:04,587   adding 'scripts/scp_to_infercnv.py'
2020-07-21T17:03:04,589   adding 'scripts/swap_column_values.py'
2020-07-21T17:03:04,593   adding 'scripts/verify_portal_file.py'
2020-07-21T17:03:04,596   adding 'scripts/ideogram/__init__.py'
2020-07-21T17:03:04,599   adding 'scripts/ideogram/cluster_groups.py'
2020-07-21T17:03:04,603   adding 'scripts/ideogram/matrix_to_ideogram_annots.py'
2020-07-21T17:03:04,608   adding 'single_cell_portal-0.1.1.dist-info/METADATA'
2020-07-21T17:03:04,610   adding 'single_cell_portal-0.1.1.dist-info/WHEEL'
2020-07-21T17:03:04,611   adding 'single_cell_portal-0.1.1.dist-info/entry_points.txt'
2020-07-21T17:03:04,613   adding 'single_cell_portal-0.1.1.dist-info/top_level.txt'
2020-07-21T17:03:04,615   adding 'single_cell_portal-0.1.1.dist-info/RECORD'
2020-07-21T17:03:04,622   removing build/bdist.linux-armv7l/wheel
2020-07-21T17:03:04,785   Building wheel for single-cell-portal (setup.py): finished with status 'done'
2020-07-21T17:03:04,790   Created wheel for single-cell-portal: filename=single_cell_portal-0.1.1-py3-none-any.whl size=57231 sha256=ba764e84c33d0b992132fd0912795d40436aa2937775afb9e7fae233e4fc6d3b
2020-07-21T17:03:04,791   Stored in directory: /tmp/pip-ephem-wheel-cache-sjfl4vpu/wheels/38/00/fd/bd0d03c3cb983944a99c8b50d279df42871ebf32cb53ca5b7f
2020-07-21T17:03:04,794 Successfully built single-cell-portal
2020-07-21T17:03:04,811 Removed build tracker: '/tmp/pip-req-tracker-86ujbbok'