2020-07-21T21:47:31,141 Created temporary directory: /tmp/pip-ephem-wheel-cache-22xbdv56 2020-07-21T21:47:31,145 Created temporary directory: /tmp/pip-req-tracker-qdhk0uwk 2020-07-21T21:47:31,146 Initialized build tracking at /tmp/pip-req-tracker-qdhk0uwk 2020-07-21T21:47:31,147 Created build tracker: /tmp/pip-req-tracker-qdhk0uwk 2020-07-21T21:47:31,147 Entered build tracker: /tmp/pip-req-tracker-qdhk0uwk 2020-07-21T21:47:31,148 Created temporary directory: /tmp/pip-wheel-bb6871xn 2020-07-21T21:47:31,165 1 location(s) to search for versions of metawibele: 2020-07-21T21:47:31,165 * https://pypi.org/simple/metawibele/ 2020-07-21T21:47:31,166 Fetching project page and analyzing links: https://pypi.org/simple/metawibele/ 2020-07-21T21:47:31,167 Getting page https://pypi.org/simple/metawibele/ 2020-07-21T21:47:31,169 Found index url https://pypi.org/simple 2020-07-21T21:47:31,371 Found link https://files.pythonhosted.org/packages/63/dd/f7fdaebfa37a66521ba36f5cba08d441ef0517891897cbaedd4dc65c23c5/metawibele-0.3.5.tar.gz#sha256=4b6c0bc3a001d849ec3fc5231b0a2af5dd718897b70f839e6435e6f1b6809c62 (from https://pypi.org/simple/metawibele/), version: 0.3.5 2020-07-21T21:47:31,379 Given no hashes to check 1 links for project 'metawibele': discarding no candidates 2020-07-21T21:47:31,380 Using version 0.3.5 (newest of versions: 0.3.5) 2020-07-21T21:47:31,385 Collecting metawibele==0.3.5 2020-07-21T21:47:31,389 Created temporary directory: /tmp/pip-unpack-2fvdw10w 2020-07-21T21:47:31,471 Downloading metawibele-0.3.5.tar.gz (76.9 MB) 2020-07-21T21:47:58,831 Added metawibele==0.3.5 from https://files.pythonhosted.org/packages/63/dd/f7fdaebfa37a66521ba36f5cba08d441ef0517891897cbaedd4dc65c23c5/metawibele-0.3.5.tar.gz#sha256=4b6c0bc3a001d849ec3fc5231b0a2af5dd718897b70f839e6435e6f1b6809c62 to build tracker '/tmp/pip-req-tracker-qdhk0uwk' 2020-07-21T21:47:58,834 Running setup.py (path:/tmp/pip-wheel-bb6871xn/metawibele/setup.py) egg_info for package metawibele 2020-07-21T21:47:58,836 Created temporary directory: /tmp/pip-pip-egg-info-hfzeoodh 2020-07-21T21:47:58,836 Running command python setup.py egg_info 2020-07-21T21:48:00,853 running egg_info 2020-07-21T21:48:00,857 creating /tmp/pip-pip-egg-info-hfzeoodh/metawibele.egg-info 2020-07-21T21:48:00,874 writing /tmp/pip-pip-egg-info-hfzeoodh/metawibele.egg-info/PKG-INFO 2020-07-21T21:48:00,879 writing dependency_links to /tmp/pip-pip-egg-info-hfzeoodh/metawibele.egg-info/dependency_links.txt 2020-07-21T21:48:00,888 writing entry points to /tmp/pip-pip-egg-info-hfzeoodh/metawibele.egg-info/entry_points.txt 2020-07-21T21:48:00,892 writing top-level names to /tmp/pip-pip-egg-info-hfzeoodh/metawibele.egg-info/top_level.txt 2020-07-21T21:48:00,896 writing manifest file '/tmp/pip-pip-egg-info-hfzeoodh/metawibele.egg-info/SOURCES.txt' 2020-07-21T21:48:01,225 reading manifest file '/tmp/pip-pip-egg-info-hfzeoodh/metawibele.egg-info/SOURCES.txt' 2020-07-21T21:48:01,228 reading manifest template 'MANIFEST.in' 2020-07-21T21:48:01,232 warning: no files found matching 'readme.md' 2020-07-21T21:48:01,257 writing manifest file '/tmp/pip-pip-egg-info-hfzeoodh/metawibele.egg-info/SOURCES.txt' 2020-07-21T21:48:01,402 Source in /tmp/pip-wheel-bb6871xn/metawibele has version 0.3.5, which satisfies requirement metawibele==0.3.5 from https://files.pythonhosted.org/packages/63/dd/f7fdaebfa37a66521ba36f5cba08d441ef0517891897cbaedd4dc65c23c5/metawibele-0.3.5.tar.gz#sha256=4b6c0bc3a001d849ec3fc5231b0a2af5dd718897b70f839e6435e6f1b6809c62 2020-07-21T21:48:01,404 Removed metawibele==0.3.5 from https://files.pythonhosted.org/packages/63/dd/f7fdaebfa37a66521ba36f5cba08d441ef0517891897cbaedd4dc65c23c5/metawibele-0.3.5.tar.gz#sha256=4b6c0bc3a001d849ec3fc5231b0a2af5dd718897b70f839e6435e6f1b6809c62 from build tracker '/tmp/pip-req-tracker-qdhk0uwk' 2020-07-21T21:48:01,407 Building wheels for collected packages: metawibele 2020-07-21T21:48:01,417 Created temporary directory: /tmp/pip-wheel-7pdg_u85 2020-07-21T21:48:01,418 Building wheel for metawibele (setup.py): started 2020-07-21T21:48:01,419 Destination directory: /tmp/pip-wheel-7pdg_u85 2020-07-21T21:48:01,419 Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-bb6871xn/metawibele/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-bb6871xn/metawibele/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-7pdg_u85 2020-07-21T21:48:03,490 running bdist_wheel 2020-07-21T21:48:03,499 running build 2020-07-21T21:48:03,500 running build_py 2020-07-21T21:48:03,771 creating build 2020-07-21T21:48:03,772 creating build/lib 2020-07-21T21:48:03,774 creating build/lib/metawibele 2020-07-21T21:48:03,776 copying metawibele/utilities.py -> build/lib/metawibele 2020-07-21T21:48:03,784 copying metawibele/metawibele.py -> build/lib/metawibele 2020-07-21T21:48:03,788 copying metawibele/config.py -> build/lib/metawibele 2020-07-21T21:48:03,794 copying metawibele/__init__.py -> build/lib/metawibele 2020-07-21T21:48:03,797 copying metawibele/check.py -> build/lib/metawibele 2020-07-21T21:48:03,804 creating build/lib/metawibele/tasks 2020-07-21T21:48:03,806 copying metawibele/tasks/prioritization.py -> build/lib/metawibele/tasks 2020-07-21T21:48:03,813 copying metawibele/tasks/__init__.py -> build/lib/metawibele/tasks 2020-07-21T21:48:03,817 copying metawibele/tasks/characterization.py -> build/lib/metawibele/tasks 2020-07-21T21:48:03,832 creating build/lib/metawibele/characterize 2020-07-21T21:48:03,834 copying metawibele/characterize/ddi_DOMINE_SIFTS.py -> build/lib/metawibele/characterize 2020-07-21T21:48:03,840 copying metawibele/characterize/psortb_annotator.py -> build/lib/metawibele/characterize 2020-07-21T21:48:03,845 copying metawibele/characterize/ddi_DOMINE_protein_family.py -> build/lib/metawibele/characterize 2020-07-21T21:48:03,850 copying metawibele/characterize/mspminer_protein_family_taxonomy.py -> build/lib/metawibele/characterize 2020-07-21T21:48:03,856 copying metawibele/characterize/maaslin2_summary.py -> build/lib/metawibele/characterize 2020-07-21T21:48:03,863 copying metawibele/characterize/msp_protein_family.py -> build/lib/metawibele/characterize 2020-07-21T21:48:03,869 copying metawibele/characterize/finalize_annotation.py -> build/lib/metawibele/characterize 2020-07-21T21:48:03,876 copying metawibele/characterize/uniref_protein.py -> build/lib/metawibele/characterize 2020-07-21T21:48:03,882 copying metawibele/characterize/mspminer_msp_taxonomy_annotation.py -> build/lib/metawibele/characterize 2020-07-21T21:48:03,887 copying metawibele/characterize/interproscan_tmhmm_protein_family.py -> build/lib/metawibele/characterize 2020-07-21T21:48:03,892 copying metawibele/characterize/interproscan_signalp_protein_family.py -> build/lib/metawibele/characterize 2020-07-21T21:48:03,897 copying metawibele/characterize/ddi_DOMINE_ann.py -> build/lib/metawibele/characterize 2020-07-21T21:48:03,903 copying metawibele/characterize/metadata_format.py -> build/lib/metawibele/characterize 2020-07-21T21:48:03,908 copying metawibele/characterize/interproscan_annotator.py -> build/lib/metawibele/characterize 2020-07-21T21:48:03,913 copying metawibele/characterize/mspminer_protein.py -> build/lib/metawibele/characterize 2020-07-21T21:48:03,920 copying metawibele/characterize/psortb_protein.py -> build/lib/metawibele/characterize 2020-07-21T21:48:03,925 copying metawibele/characterize/interproscan_protein.py -> build/lib/metawibele/characterize 2020-07-21T21:48:03,930 copying metawibele/characterize/interproscan_phobius_protein_family.py -> build/lib/metawibele/characterize 2020-07-21T21:48:03,935 copying metawibele/characterize/interproscan_protein_family.py -> build/lib/metawibele/characterize 2020-07-21T21:48:03,940 copying metawibele/characterize/mspminer_protein_family.py -> build/lib/metawibele/characterize 2020-07-21T21:48:03,948 copying metawibele/characterize/sum_to_protein_family_abundance.py -> build/lib/metawibele/characterize 2020-07-21T21:48:03,954 copying metawibele/characterize/ddi_DOMINE_protein.py -> build/lib/metawibele/characterize 2020-07-21T21:48:03,960 copying metawibele/characterize/maaslin2_collection.py -> build/lib/metawibele/characterize 2020-07-21T21:48:03,967 copying metawibele/characterize/mspminer_msp.py -> build/lib/metawibele/characterize 2020-07-21T21:48:03,971 copying metawibele/characterize/interproscan_pfam_protein_family.py -> build/lib/metawibele/characterize 2020-07-21T21:48:03,976 copying metawibele/characterize/abundance_annotator.py -> build/lib/metawibele/characterize 2020-07-21T21:48:03,981 copying metawibele/characterize/mspminer_msp_uniref_annotation.py -> build/lib/metawibele/characterize 2020-07-21T21:48:03,988 copying metawibele/characterize/summary_protein_family_uniref_annotation.py -> build/lib/metawibele/characterize 2020-07-21T21:48:03,995 copying metawibele/characterize/summary_function_annotation.py -> build/lib/metawibele/characterize 2020-07-21T21:48:04,002 copying metawibele/characterize/ddi_DOMINE_ExpAtlas.py -> build/lib/metawibele/characterize 2020-07-21T21:48:04,007 copying metawibele/characterize/maaslin2_annotator.py -> build/lib/metawibele/characterize 2020-07-21T21:48:04,011 copying metawibele/characterize/pfam2go.py -> build/lib/metawibele/characterize 2020-07-21T21:48:04,016 copying metawibele/characterize/denovo_TM_SP.py -> build/lib/metawibele/characterize 2020-07-21T21:48:04,021 copying metawibele/characterize/uniref_annotator_stat.py -> build/lib/metawibele/characterize 2020-07-21T21:48:04,027 copying metawibele/characterize/psortb_protein_family.py -> build/lib/metawibele/characterize 2020-07-21T21:48:04,034 copying metawibele/characterize/__init__.py -> build/lib/metawibele/characterize 2020-07-21T21:48:04,038 copying metawibele/characterize/summary_all_annotation.py -> build/lib/metawibele/characterize 2020-07-21T21:48:04,044 copying metawibele/characterize/utils.py -> build/lib/metawibele/characterize 2020-07-21T21:48:04,049 copying metawibele/characterize/uniref_protein_family.py -> build/lib/metawibele/characterize 2020-07-21T21:48:04,055 copying metawibele/characterize/uniref_annotator.py -> build/lib/metawibele/characterize 2020-07-21T21:48:04,060 copying metawibele/characterize/maaslin2.py -> build/lib/metawibele/characterize 2020-07-21T21:48:04,065 copying metawibele/characterize/summary_protein_uniref_annotation.py -> build/lib/metawibele/characterize 2020-07-21T21:48:04,073 creating build/lib/metawibele/tools 2020-07-21T21:48:04,075 copying metawibele/tools/gene_abundance_indexRef.py -> build/lib/metawibele/tools 2020-07-21T21:48:04,080 copying metawibele/tools/extract_complete_ORF_seq.py -> build/lib/metawibele/tools 2020-07-21T21:48:04,085 copying metawibele/tools/format_protein_sequences.py -> build/lib/metawibele/tools 2020-07-21T21:48:04,090 copying metawibele/tools/extract_protein_coding_genes.py -> build/lib/metawibele/tools 2020-07-21T21:48:04,095 copying metawibele/tools/extract_non_redundance_seq.py -> build/lib/metawibele/tools 2020-07-21T21:48:04,099 copying metawibele/tools/format_contig_sequences.py -> build/lib/metawibele/tools 2020-07-21T21:48:04,104 copying metawibele/tools/gene_abundance.py -> build/lib/metawibele/tools 2020-07-21T21:48:04,110 copying metawibele/tools/combine_gene_sequences.py -> build/lib/metawibele/tools 2020-07-21T21:48:04,117 copying metawibele/tools/preprocessing_tasks.py -> build/lib/metawibele/tools 2020-07-21T21:48:04,125 copying metawibele/tools/extract_cluster_CD_hit.py -> build/lib/metawibele/tools 2020-07-21T21:48:04,130 copying metawibele/tools/gene_catalog_abundance.py -> build/lib/metawibele/tools 2020-07-21T21:48:04,135 copying metawibele/tools/__init__.py -> build/lib/metawibele/tools 2020-07-21T21:48:04,140 creating build/lib/metawibele/prioritize 2020-07-21T21:48:04,141 copying metawibele/prioritize/quantify_prioritization.py -> build/lib/metawibele/prioritize 2020-07-21T21:48:04,149 copying metawibele/prioritize/finalize_prioritization.py -> build/lib/metawibele/prioritize 2020-07-21T21:48:04,155 copying metawibele/prioritize/filter_prioritization.py -> build/lib/metawibele/prioritize 2020-07-21T21:48:04,162 copying metawibele/prioritize/__init__.py -> build/lib/metawibele/prioritize 2020-07-21T21:48:04,169 creating build/lib/metawibele/common 2020-07-21T21:48:04,171 copying metawibele/common/transpose.py -> build/lib/metawibele/common 2020-07-21T21:48:04,175 copying metawibele/common/extract_abundance_feature_subset.py -> build/lib/metawibele/common 2020-07-21T21:48:04,179 copying metawibele/common/join_family_abundance.py -> build/lib/metawibele/common 2020-07-21T21:48:04,183 copying metawibele/common/filter_clusters.py -> build/lib/metawibele/common 2020-07-21T21:48:04,187 copying metawibele/common/filter_prevalence.py -> build/lib/metawibele/common 2020-07-21T21:48:04,191 copying metawibele/common/abundance_normalization.py -> build/lib/metawibele/common 2020-07-21T21:48:04,196 copying metawibele/common/abundance_smoothing.py -> build/lib/metawibele/common 2020-07-21T21:48:04,201 copying metawibele/common/split_fasta_file.py -> build/lib/metawibele/common 2020-07-21T21:48:04,205 copying metawibele/common/prepare_uniprot_taxonomy.py -> build/lib/metawibele/common 2020-07-21T21:48:04,211 copying metawibele/common/prepare_uniprot_annotation.py -> build/lib/metawibele/common 2020-07-21T21:48:04,218 copying metawibele/common/prepare_domain_databases.py -> build/lib/metawibele/common 2020-07-21T21:48:04,224 copying metawibele/common/split_family_abundance.py -> build/lib/metawibele/common 2020-07-21T21:48:04,229 copying metawibele/common/extract_uniprot_pfam.py -> build/lib/metawibele/common 2020-07-21T21:48:04,234 copying metawibele/common/abundance_RPK.py -> build/lib/metawibele/common 2020-07-21T21:48:04,239 copying metawibele/common/__init__.py -> build/lib/metawibele/common 2020-07-21T21:48:04,242 copying metawibele/common/download_config_file.py -> build/lib/metawibele/common 2020-07-21T21:48:04,246 copying metawibele/common/prepare_uniref_annotation.py -> build/lib/metawibele/common 2020-07-21T21:48:04,252 copying metawibele/common/utils.py -> build/lib/metawibele/common 2020-07-21T21:48:04,259 copying metawibele/common/extract_abundance_sample_subset.py -> build/lib/metawibele/common 2020-07-21T21:48:04,264 copying metawibele/common/abundance_filtering.py -> build/lib/metawibele/common 2020-07-21T21:48:04,269 copying metawibele/common/combine_abundance_annotation.py -> build/lib/metawibele/common 2020-07-21T21:48:04,289 creating build/lib/metawibele/workflows 2020-07-21T21:48:04,290 copying metawibele/workflows/preprocess.py -> build/lib/metawibele/workflows 2020-07-21T21:48:04,297 copying metawibele/workflows/characterize.py -> build/lib/metawibele/workflows 2020-07-21T21:48:04,303 copying metawibele/workflows/prioritize.py -> build/lib/metawibele/workflows 2020-07-21T21:48:04,309 creating build/lib/metawibele/configs 2020-07-21T21:48:04,311 copying metawibele/configs/MSPminer_setting.cfg -> build/lib/metawibele/configs 2020-07-21T21:48:04,318 copying metawibele/configs/metawibele.cfg -> build/lib/metawibele/configs 2020-07-21T21:48:04,325 copying metawibele/configs/characterization.cfg -> build/lib/metawibele/configs 2020-07-21T21:48:04,332 copying metawibele/configs/prioritization.cfg -> build/lib/metawibele/configs 2020-07-21T21:48:04,338 creating build/lib/metawibele/data 2020-07-21T21:48:04,339 creating build/lib/metawibele/data/domain 2020-07-21T21:48:04,342 copying metawibele/data/domain/pfam_descriptions.txt.gz -> build/lib/metawibele/data/domain 2020-07-21T21:48:04,369 copying metawibele/data/domain/Human_protein_Atlas_colon_rectum.txt.gz -> build/lib/metawibele/data/domain 2020-07-21T21:48:04,380 copying metawibele/data/domain/32_Uhlen_Lab_colon_rectum.txt.gz -> build/lib/metawibele/data/domain 2020-07-21T21:48:04,404 copying metawibele/data/domain/Encode_sigmoid_colon.txt.gz -> build/lib/metawibele/data/domain 2020-07-21T21:48:04,424 copying metawibele/data/domain/gene_ontology.txt.gz -> build/lib/metawibele/data/domain 2020-07-21T21:48:04,441 copying metawibele/data/domain/pdb_chain_taxonomy.tsv.gz -> build/lib/metawibele/data/domain 2020-07-21T21:48:06,993 copying metawibele/data/domain/GTEx_sigmoid_transverse_colon.txt.gz -> build/lib/metawibele/data/domain 2020-07-21T21:48:07,015 copying metawibele/data/domain/FANTOM5_colon_rectum.txt.gz -> build/lib/metawibele/data/domain 2020-07-21T21:48:07,035 copying metawibele/data/domain/pdb_chain_pfam.tsv.gz -> build/lib/metawibele/data/domain 2020-07-21T21:48:07,259 copying metawibele/data/domain/README.txt -> build/lib/metawibele/data/domain 2020-07-21T21:48:07,266 copying metawibele/data/domain/Human_proteome_map_colon_rectum.txt.gz -> build/lib/metawibele/data/domain 2020-07-21T21:48:07,282 copying metawibele/data/domain/INTERACTION.txt.gz -> build/lib/metawibele/data/domain 2020-07-21T21:48:07,303 copying metawibele/data/domain/Illumina_Body_Map_colon.txt.gz -> build/lib/metawibele/data/domain 2020-07-21T21:48:07,322 creating build/lib/metawibele/data/uniref 2020-07-21T21:48:07,325 copying metawibele/data/uniref/uniprot_taxaID_microbiome.txt.gz -> build/lib/metawibele/data/uniref 2020-07-21T21:48:07,520 copying metawibele/data/uniref/uniprot_taxonomy.tsv.gz -> build/lib/metawibele/data/uniref 2020-07-21T21:48:11,596 copying metawibele/data/uniref/uniprot_human_pfam.tsv.gz -> build/lib/metawibele/data/uniref 2020-07-21T21:48:11,806 copying metawibele/data/uniref/uniprot_taxaID_mammalia.txt.gz -> build/lib/metawibele/data/uniref 2020-07-21T21:48:11,816 copying metawibele/data/uniref/README.txt -> build/lib/metawibele/data/uniref 2020-07-21T21:48:11,822 creating build/lib/metawibele/data/misc 2020-07-21T21:48:11,824 copying metawibele/data/misc/vignette_function.tsv -> build/lib/metawibele/data/misc 2020-07-21T21:48:11,832 creating build/lib/metawibele/Rscripts 2020-07-21T21:48:11,835 copying metawibele/Rscripts/pcl_utils.R -> build/lib/metawibele/Rscripts 2020-07-21T21:48:11,847 copying metawibele/Rscripts/maaslin2_utils.R -> build/lib/metawibele/Rscripts 2020-07-21T21:48:11,879 running build_scripts 2020-07-21T21:48:11,880 creating build/scripts-3.7 2020-07-21T21:48:11,883 copying and adjusting metawibele/workflows/preprocess.py -> build/scripts-3.7 2020-07-21T21:48:11,888 copying and adjusting metawibele/workflows/characterize.py -> build/scripts-3.7 2020-07-21T21:48:11,894 copying and adjusting metawibele/workflows/prioritize.py -> build/scripts-3.7 2020-07-21T21:48:11,897 changing mode of build/scripts-3.7/preprocess.py from 644 to 755 2020-07-21T21:48:11,898 changing mode of build/scripts-3.7/characterize.py from 644 to 755 2020-07-21T21:48:11,899 changing mode of build/scripts-3.7/prioritize.py from 644 to 755 2020-07-21T21:48:11,902 installing to build/bdist.linux-armv7l/wheel 2020-07-21T21:48:11,903 running install 2020-07-21T21:48:11,906 running install_lib 2020-07-21T21:48:11,917 creating build/bdist.linux-armv7l 2020-07-21T21:48:11,918 creating build/bdist.linux-armv7l/wheel 2020-07-21T21:48:11,922 creating build/bdist.linux-armv7l/wheel/metawibele 2020-07-21T21:48:11,925 creating build/bdist.linux-armv7l/wheel/metawibele/Rscripts 2020-07-21T21:48:11,927 copying build/lib/metawibele/Rscripts/pcl_utils.R -> build/bdist.linux-armv7l/wheel/metawibele/Rscripts 2020-07-21T21:48:11,937 copying build/lib/metawibele/Rscripts/maaslin2_utils.R -> build/bdist.linux-armv7l/wheel/metawibele/Rscripts 2020-07-21T21:48:11,943 copying build/lib/metawibele/utilities.py -> build/bdist.linux-armv7l/wheel/metawibele 2020-07-21T21:48:11,953 creating build/bdist.linux-armv7l/wheel/metawibele/configs 2020-07-21T21:48:11,956 copying build/lib/metawibele/configs/MSPminer_setting.cfg -> build/bdist.linux-armv7l/wheel/metawibele/configs 2020-07-21T21:48:11,961 copying build/lib/metawibele/configs/metawibele.cfg -> build/bdist.linux-armv7l/wheel/metawibele/configs 2020-07-21T21:48:11,967 copying build/lib/metawibele/configs/characterization.cfg -> build/bdist.linux-armv7l/wheel/metawibele/configs 2020-07-21T21:48:11,973 copying build/lib/metawibele/configs/prioritization.cfg -> build/bdist.linux-armv7l/wheel/metawibele/configs 2020-07-21T21:48:11,980 creating build/bdist.linux-armv7l/wheel/metawibele/tasks 2020-07-21T21:48:11,982 copying build/lib/metawibele/tasks/prioritization.py -> build/bdist.linux-armv7l/wheel/metawibele/tasks 2020-07-21T21:48:11,989 copying build/lib/metawibele/tasks/__init__.py -> build/bdist.linux-armv7l/wheel/metawibele/tasks 2020-07-21T21:48:11,993 copying build/lib/metawibele/tasks/characterization.py -> build/bdist.linux-armv7l/wheel/metawibele/tasks 2020-07-21T21:48:12,006 creating build/bdist.linux-armv7l/wheel/metawibele/data 2020-07-21T21:48:12,010 creating build/bdist.linux-armv7l/wheel/metawibele/data/domain 2020-07-21T21:48:12,012 copying build/lib/metawibele/data/domain/pfam_descriptions.txt.gz -> build/bdist.linux-armv7l/wheel/metawibele/data/domain 2020-07-21T21:48:12,038 copying build/lib/metawibele/data/domain/Human_protein_Atlas_colon_rectum.txt.gz -> build/bdist.linux-armv7l/wheel/metawibele/data/domain 2020-07-21T21:48:12,047 copying build/lib/metawibele/data/domain/32_Uhlen_Lab_colon_rectum.txt.gz -> build/bdist.linux-armv7l/wheel/metawibele/data/domain 2020-07-21T21:48:12,070 copying build/lib/metawibele/data/domain/Encode_sigmoid_colon.txt.gz -> build/bdist.linux-armv7l/wheel/metawibele/data/domain 2020-07-21T21:48:12,087 copying build/lib/metawibele/data/domain/gene_ontology.txt.gz -> build/bdist.linux-armv7l/wheel/metawibele/data/domain 2020-07-21T21:48:12,102 copying build/lib/metawibele/data/domain/pdb_chain_taxonomy.tsv.gz -> build/bdist.linux-armv7l/wheel/metawibele/data/domain 2020-07-21T21:48:14,877 copying build/lib/metawibele/data/domain/GTEx_sigmoid_transverse_colon.txt.gz -> build/bdist.linux-armv7l/wheel/metawibele/data/domain 2020-07-21T21:48:14,900 copying build/lib/metawibele/data/domain/FANTOM5_colon_rectum.txt.gz -> build/bdist.linux-armv7l/wheel/metawibele/data/domain 2020-07-21T21:48:14,922 copying build/lib/metawibele/data/domain/pdb_chain_pfam.tsv.gz -> build/bdist.linux-armv7l/wheel/metawibele/data/domain 2020-07-21T21:48:15,143 copying build/lib/metawibele/data/domain/README.txt -> build/bdist.linux-armv7l/wheel/metawibele/data/domain 2020-07-21T21:48:15,150 copying build/lib/metawibele/data/domain/Human_proteome_map_colon_rectum.txt.gz -> build/bdist.linux-armv7l/wheel/metawibele/data/domain 2020-07-21T21:48:15,166 copying build/lib/metawibele/data/domain/INTERACTION.txt.gz -> build/bdist.linux-armv7l/wheel/metawibele/data/domain 2020-07-21T21:48:15,185 copying build/lib/metawibele/data/domain/Illumina_Body_Map_colon.txt.gz -> build/bdist.linux-armv7l/wheel/metawibele/data/domain 2020-07-21T21:48:15,205 creating build/bdist.linux-armv7l/wheel/metawibele/data/uniref 2020-07-21T21:48:15,208 copying build/lib/metawibele/data/uniref/uniprot_taxaID_microbiome.txt.gz -> build/bdist.linux-armv7l/wheel/metawibele/data/uniref 2020-07-21T21:48:15,403 copying build/lib/metawibele/data/uniref/uniprot_taxonomy.tsv.gz -> build/bdist.linux-armv7l/wheel/metawibele/data/uniref 2020-07-21T21:48:19,475 copying build/lib/metawibele/data/uniref/uniprot_human_pfam.tsv.gz -> build/bdist.linux-armv7l/wheel/metawibele/data/uniref 2020-07-21T21:48:19,683 copying build/lib/metawibele/data/uniref/uniprot_taxaID_mammalia.txt.gz -> build/bdist.linux-armv7l/wheel/metawibele/data/uniref 2020-07-21T21:48:19,692 copying build/lib/metawibele/data/uniref/README.txt -> build/bdist.linux-armv7l/wheel/metawibele/data/uniref 2020-07-21T21:48:19,699 creating build/bdist.linux-armv7l/wheel/metawibele/data/misc 2020-07-21T21:48:19,702 copying build/lib/metawibele/data/misc/vignette_function.tsv -> build/bdist.linux-armv7l/wheel/metawibele/data/misc 2020-07-21T21:48:19,709 copying build/lib/metawibele/metawibele.py -> build/bdist.linux-armv7l/wheel/metawibele 2020-07-21T21:48:19,714 copying build/lib/metawibele/config.py -> build/bdist.linux-armv7l/wheel/metawibele 2020-07-21T21:48:19,723 creating build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-07-21T21:48:19,725 copying build/lib/metawibele/characterize/ddi_DOMINE_SIFTS.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-07-21T21:48:19,731 copying build/lib/metawibele/characterize/psortb_annotator.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-07-21T21:48:19,737 copying build/lib/metawibele/characterize/ddi_DOMINE_protein_family.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-07-21T21:48:19,744 copying build/lib/metawibele/characterize/mspminer_protein_family_taxonomy.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-07-21T21:48:19,751 copying build/lib/metawibele/characterize/maaslin2_summary.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-07-21T21:48:19,758 copying build/lib/metawibele/characterize/msp_protein_family.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-07-21T21:48:19,763 copying build/lib/metawibele/characterize/finalize_annotation.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-07-21T21:48:19,769 copying build/lib/metawibele/characterize/uniref_protein.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-07-21T21:48:19,776 copying build/lib/metawibele/characterize/mspminer_msp_taxonomy_annotation.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-07-21T21:48:19,783 copying build/lib/metawibele/characterize/interproscan_tmhmm_protein_family.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-07-21T21:48:19,789 copying build/lib/metawibele/characterize/interproscan_signalp_protein_family.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-07-21T21:48:19,795 copying build/lib/metawibele/characterize/ddi_DOMINE_ann.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-07-21T21:48:19,800 copying build/lib/metawibele/characterize/metadata_format.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-07-21T21:48:19,804 copying build/lib/metawibele/characterize/interproscan_annotator.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-07-21T21:48:19,808 copying build/lib/metawibele/characterize/mspminer_protein.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-07-21T21:48:19,815 copying build/lib/metawibele/characterize/psortb_protein.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-07-21T21:48:19,822 copying build/lib/metawibele/characterize/interproscan_protein.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-07-21T21:48:19,829 copying build/lib/metawibele/characterize/interproscan_phobius_protein_family.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-07-21T21:48:19,835 copying build/lib/metawibele/characterize/interproscan_protein_family.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-07-21T21:48:19,841 copying build/lib/metawibele/characterize/mspminer_protein_family.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-07-21T21:48:19,847 copying build/lib/metawibele/characterize/sum_to_protein_family_abundance.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-07-21T21:48:19,852 copying build/lib/metawibele/characterize/ddi_DOMINE_protein.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-07-21T21:48:19,859 copying build/lib/metawibele/characterize/maaslin2_collection.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-07-21T21:48:19,867 copying build/lib/metawibele/characterize/mspminer_msp.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-07-21T21:48:19,873 copying build/lib/metawibele/characterize/interproscan_pfam_protein_family.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-07-21T21:48:19,879 copying build/lib/metawibele/characterize/abundance_annotator.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-07-21T21:48:19,884 copying build/lib/metawibele/characterize/mspminer_msp_uniref_annotation.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-07-21T21:48:19,889 copying build/lib/metawibele/characterize/summary_protein_family_uniref_annotation.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-07-21T21:48:19,897 copying build/lib/metawibele/characterize/summary_function_annotation.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-07-21T21:48:19,904 copying build/lib/metawibele/characterize/ddi_DOMINE_ExpAtlas.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-07-21T21:48:19,911 copying build/lib/metawibele/characterize/maaslin2_annotator.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-07-21T21:48:19,916 copying build/lib/metawibele/characterize/pfam2go.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-07-21T21:48:19,921 copying build/lib/metawibele/characterize/denovo_TM_SP.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-07-21T21:48:19,926 copying build/lib/metawibele/characterize/uniref_annotator_stat.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-07-21T21:48:19,932 copying build/lib/metawibele/characterize/psortb_protein_family.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-07-21T21:48:19,938 copying build/lib/metawibele/characterize/__init__.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-07-21T21:48:19,943 copying build/lib/metawibele/characterize/summary_all_annotation.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-07-21T21:48:19,950 copying build/lib/metawibele/characterize/utils.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-07-21T21:48:19,956 copying build/lib/metawibele/characterize/uniref_protein_family.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-07-21T21:48:19,963 copying build/lib/metawibele/characterize/uniref_annotator.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-07-21T21:48:19,968 copying build/lib/metawibele/characterize/maaslin2.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-07-21T21:48:19,973 copying build/lib/metawibele/characterize/summary_protein_uniref_annotation.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-07-21T21:48:19,983 creating build/bdist.linux-armv7l/wheel/metawibele/tools 2020-07-21T21:48:19,985 copying build/lib/metawibele/tools/gene_abundance_indexRef.py -> build/bdist.linux-armv7l/wheel/metawibele/tools 2020-07-21T21:48:19,991 copying build/lib/metawibele/tools/extract_complete_ORF_seq.py -> build/bdist.linux-armv7l/wheel/metawibele/tools 2020-07-21T21:48:19,997 copying build/lib/metawibele/tools/format_protein_sequences.py -> build/bdist.linux-armv7l/wheel/metawibele/tools 2020-07-21T21:48:20,002 copying build/lib/metawibele/tools/extract_protein_coding_genes.py -> build/bdist.linux-armv7l/wheel/metawibele/tools 2020-07-21T21:48:20,007 copying build/lib/metawibele/tools/extract_non_redundance_seq.py -> build/bdist.linux-armv7l/wheel/metawibele/tools 2020-07-21T21:48:20,011 copying build/lib/metawibele/tools/format_contig_sequences.py -> build/bdist.linux-armv7l/wheel/metawibele/tools 2020-07-21T21:48:20,015 copying build/lib/metawibele/tools/gene_abundance.py -> build/bdist.linux-armv7l/wheel/metawibele/tools 2020-07-21T21:48:20,022 copying build/lib/metawibele/tools/combine_gene_sequences.py -> build/bdist.linux-armv7l/wheel/metawibele/tools 2020-07-21T21:48:20,028 copying build/lib/metawibele/tools/preprocessing_tasks.py -> build/bdist.linux-armv7l/wheel/metawibele/tools 2020-07-21T21:48:20,036 copying build/lib/metawibele/tools/extract_cluster_CD_hit.py -> build/bdist.linux-armv7l/wheel/metawibele/tools 2020-07-21T21:48:20,041 copying build/lib/metawibele/tools/gene_catalog_abundance.py -> build/bdist.linux-armv7l/wheel/metawibele/tools 2020-07-21T21:48:20,046 copying build/lib/metawibele/tools/__init__.py -> build/bdist.linux-armv7l/wheel/metawibele/tools 2020-07-21T21:48:20,051 creating build/bdist.linux-armv7l/wheel/metawibele/workflows 2020-07-21T21:48:20,053 copying build/lib/metawibele/workflows/preprocess.py -> build/bdist.linux-armv7l/wheel/metawibele/workflows 2020-07-21T21:48:20,059 copying build/lib/metawibele/workflows/characterize.py -> build/bdist.linux-armv7l/wheel/metawibele/workflows 2020-07-21T21:48:20,066 copying build/lib/metawibele/workflows/prioritize.py -> build/bdist.linux-armv7l/wheel/metawibele/workflows 2020-07-21T21:48:20,074 creating build/bdist.linux-armv7l/wheel/metawibele/prioritize 2020-07-21T21:48:20,077 copying build/lib/metawibele/prioritize/quantify_prioritization.py -> build/bdist.linux-armv7l/wheel/metawibele/prioritize 2020-07-21T21:48:20,084 copying build/lib/metawibele/prioritize/finalize_prioritization.py -> build/bdist.linux-armv7l/wheel/metawibele/prioritize 2020-07-21T21:48:20,089 copying build/lib/metawibele/prioritize/filter_prioritization.py -> build/bdist.linux-armv7l/wheel/metawibele/prioritize 2020-07-21T21:48:20,094 copying build/lib/metawibele/prioritize/__init__.py -> build/bdist.linux-armv7l/wheel/metawibele/prioritize 2020-07-21T21:48:20,099 copying build/lib/metawibele/__init__.py -> build/bdist.linux-armv7l/wheel/metawibele 2020-07-21T21:48:20,105 creating build/bdist.linux-armv7l/wheel/metawibele/common 2020-07-21T21:48:20,108 copying build/lib/metawibele/common/transpose.py -> build/bdist.linux-armv7l/wheel/metawibele/common 2020-07-21T21:48:20,114 copying build/lib/metawibele/common/extract_abundance_feature_subset.py -> build/bdist.linux-armv7l/wheel/metawibele/common 2020-07-21T21:48:20,119 copying build/lib/metawibele/common/join_family_abundance.py -> build/bdist.linux-armv7l/wheel/metawibele/common 2020-07-21T21:48:20,123 copying build/lib/metawibele/common/filter_clusters.py -> build/bdist.linux-armv7l/wheel/metawibele/common 2020-07-21T21:48:20,128 copying build/lib/metawibele/common/filter_prevalence.py -> build/bdist.linux-armv7l/wheel/metawibele/common 2020-07-21T21:48:20,132 copying build/lib/metawibele/common/abundance_normalization.py -> build/bdist.linux-armv7l/wheel/metawibele/common 2020-07-21T21:48:20,137 copying build/lib/metawibele/common/abundance_smoothing.py -> build/bdist.linux-armv7l/wheel/metawibele/common 2020-07-21T21:48:20,144 copying build/lib/metawibele/common/split_fasta_file.py -> build/bdist.linux-armv7l/wheel/metawibele/common 2020-07-21T21:48:20,150 copying build/lib/metawibele/common/prepare_uniprot_taxonomy.py -> build/bdist.linux-armv7l/wheel/metawibele/common 2020-07-21T21:48:20,157 copying build/lib/metawibele/common/prepare_uniprot_annotation.py -> build/bdist.linux-armv7l/wheel/metawibele/common 2020-07-21T21:48:20,162 copying build/lib/metawibele/common/prepare_domain_databases.py -> build/bdist.linux-armv7l/wheel/metawibele/common 2020-07-21T21:48:20,167 copying build/lib/metawibele/common/split_family_abundance.py -> build/bdist.linux-armv7l/wheel/metawibele/common 2020-07-21T21:48:20,172 copying build/lib/metawibele/common/extract_uniprot_pfam.py -> build/bdist.linux-armv7l/wheel/metawibele/common 2020-07-21T21:48:20,177 copying build/lib/metawibele/common/abundance_RPK.py -> build/bdist.linux-armv7l/wheel/metawibele/common 2020-07-21T21:48:20,183 copying build/lib/metawibele/common/__init__.py -> build/bdist.linux-armv7l/wheel/metawibele/common 2020-07-21T21:48:20,187 copying build/lib/metawibele/common/download_config_file.py -> build/bdist.linux-armv7l/wheel/metawibele/common 2020-07-21T21:48:20,193 copying build/lib/metawibele/common/prepare_uniref_annotation.py -> build/bdist.linux-armv7l/wheel/metawibele/common 2020-07-21T21:48:20,199 copying build/lib/metawibele/common/utils.py -> build/bdist.linux-armv7l/wheel/metawibele/common 2020-07-21T21:48:20,205 copying build/lib/metawibele/common/extract_abundance_sample_subset.py -> build/bdist.linux-armv7l/wheel/metawibele/common 2020-07-21T21:48:20,209 copying build/lib/metawibele/common/abundance_filtering.py -> build/bdist.linux-armv7l/wheel/metawibele/common 2020-07-21T21:48:20,214 copying build/lib/metawibele/common/combine_abundance_annotation.py -> build/bdist.linux-armv7l/wheel/metawibele/common 2020-07-21T21:48:20,220 copying build/lib/metawibele/check.py -> build/bdist.linux-armv7l/wheel/metawibele 2020-07-21T21:48:20,225 running install_egg_info 2020-07-21T21:48:20,261 running egg_info 2020-07-21T21:48:20,276 writing metawibele.egg-info/PKG-INFO 2020-07-21T21:48:20,279 writing dependency_links to metawibele.egg-info/dependency_links.txt 2020-07-21T21:48:20,288 writing entry points to metawibele.egg-info/entry_points.txt 2020-07-21T21:48:20,292 writing top-level names to metawibele.egg-info/top_level.txt 2020-07-21T21:48:20,365 reading manifest file 'metawibele.egg-info/SOURCES.txt' 2020-07-21T21:48:20,377 reading manifest template 'MANIFEST.in' 2020-07-21T21:48:20,378 warning: no files found matching 'readme.md' 2020-07-21T21:48:20,407 writing manifest file 'metawibele.egg-info/SOURCES.txt' 2020-07-21T21:48:20,411 Copying metawibele.egg-info to build/bdist.linux-armv7l/wheel/metawibele-0.3.5-py3.7.egg-info 2020-07-21T21:48:20,443 running install_scripts 2020-07-21T21:48:20,490 creating build/bdist.linux-armv7l/wheel/metawibele-0.3.5.data 2020-07-21T21:48:20,490 creating build/bdist.linux-armv7l/wheel/metawibele-0.3.5.data/scripts 2020-07-21T21:48:20,493 copying build/scripts-3.7/preprocess.py -> build/bdist.linux-armv7l/wheel/metawibele-0.3.5.data/scripts 2020-07-21T21:48:20,499 copying build/scripts-3.7/characterize.py -> build/bdist.linux-armv7l/wheel/metawibele-0.3.5.data/scripts 2020-07-21T21:48:20,504 copying build/scripts-3.7/prioritize.py -> build/bdist.linux-armv7l/wheel/metawibele-0.3.5.data/scripts 2020-07-21T21:48:20,509 changing mode of build/bdist.linux-armv7l/wheel/metawibele-0.3.5.data/scripts/preprocess.py to 755 2020-07-21T21:48:20,510 changing mode of build/bdist.linux-armv7l/wheel/metawibele-0.3.5.data/scripts/characterize.py to 755 2020-07-21T21:48:20,510 changing mode of build/bdist.linux-armv7l/wheel/metawibele-0.3.5.data/scripts/prioritize.py to 755 2020-07-21T21:48:20,552 adding license file "LICENSE" (matched pattern "LICEN[CS]E*") 2020-07-21T21:48:20,567 creating build/bdist.linux-armv7l/wheel/metawibele-0.3.5.dist-info/WHEEL 2020-07-21T21:48:20,572 creating '/tmp/pip-wheel-7pdg_u85/metawibele-0.3.5-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2020-07-21T21:48:20,577 adding 'metawibele/__init__.py' 2020-07-21T21:48:20,580 adding 'metawibele/check.py' 2020-07-21T21:48:20,585 adding 'metawibele/config.py' 2020-07-21T21:48:20,588 adding 'metawibele/metawibele.py' 2020-07-21T21:48:20,595 adding 'metawibele/utilities.py' 2020-07-21T21:48:20,599 adding 'metawibele/Rscripts/maaslin2_utils.R' 2020-07-21T21:48:20,611 adding 'metawibele/Rscripts/pcl_utils.R' 2020-07-21T21:48:20,616 adding 'metawibele/characterize/__init__.py' 2020-07-21T21:48:20,620 adding 'metawibele/characterize/abundance_annotator.py' 2020-07-21T21:48:20,623 adding 'metawibele/characterize/ddi_DOMINE_ExpAtlas.py' 2020-07-21T21:48:20,627 adding 'metawibele/characterize/ddi_DOMINE_SIFTS.py' 2020-07-21T21:48:20,631 adding 'metawibele/characterize/ddi_DOMINE_ann.py' 2020-07-21T21:48:20,634 adding 'metawibele/characterize/ddi_DOMINE_protein.py' 2020-07-21T21:48:20,638 adding 'metawibele/characterize/ddi_DOMINE_protein_family.py' 2020-07-21T21:48:20,641 adding 'metawibele/characterize/denovo_TM_SP.py' 2020-07-21T21:48:20,646 adding 'metawibele/characterize/finalize_annotation.py' 2020-07-21T21:48:20,649 adding 'metawibele/characterize/interproscan_annotator.py' 2020-07-21T21:48:20,652 adding 'metawibele/characterize/interproscan_pfam_protein_family.py' 2020-07-21T21:48:20,656 adding 'metawibele/characterize/interproscan_phobius_protein_family.py' 2020-07-21T21:48:20,660 adding 'metawibele/characterize/interproscan_protein.py' 2020-07-21T21:48:20,663 adding 'metawibele/characterize/interproscan_protein_family.py' 2020-07-21T21:48:20,667 adding 'metawibele/characterize/interproscan_signalp_protein_family.py' 2020-07-21T21:48:20,671 adding 'metawibele/characterize/interproscan_tmhmm_protein_family.py' 2020-07-21T21:48:20,674 adding 'metawibele/characterize/maaslin2.py' 2020-07-21T21:48:20,677 adding 'metawibele/characterize/maaslin2_annotator.py' 2020-07-21T21:48:20,682 adding 'metawibele/characterize/maaslin2_collection.py' 2020-07-21T21:48:20,687 adding 'metawibele/characterize/maaslin2_summary.py' 2020-07-21T21:48:20,690 adding 'metawibele/characterize/metadata_format.py' 2020-07-21T21:48:20,693 adding 'metawibele/characterize/msp_protein_family.py' 2020-07-21T21:48:20,697 adding 'metawibele/characterize/mspminer_msp.py' 2020-07-21T21:48:20,701 adding 'metawibele/characterize/mspminer_msp_taxonomy_annotation.py' 2020-07-21T21:48:20,704 adding 'metawibele/characterize/mspminer_msp_uniref_annotation.py' 2020-07-21T21:48:20,707 adding 'metawibele/characterize/mspminer_protein.py' 2020-07-21T21:48:20,712 adding 'metawibele/characterize/mspminer_protein_family.py' 2020-07-21T21:48:20,716 adding 'metawibele/characterize/mspminer_protein_family_taxonomy.py' 2020-07-21T21:48:20,720 adding 'metawibele/characterize/pfam2go.py' 2020-07-21T21:48:20,722 adding 'metawibele/characterize/psortb_annotator.py' 2020-07-21T21:48:20,726 adding 'metawibele/characterize/psortb_protein.py' 2020-07-21T21:48:20,730 adding 'metawibele/characterize/psortb_protein_family.py' 2020-07-21T21:48:20,733 adding 'metawibele/characterize/sum_to_protein_family_abundance.py' 2020-07-21T21:48:20,736 adding 'metawibele/characterize/summary_all_annotation.py' 2020-07-21T21:48:20,740 adding 'metawibele/characterize/summary_function_annotation.py' 2020-07-21T21:48:20,745 adding 'metawibele/characterize/summary_protein_family_uniref_annotation.py' 2020-07-21T21:48:20,749 adding 'metawibele/characterize/summary_protein_uniref_annotation.py' 2020-07-21T21:48:20,753 adding 'metawibele/characterize/uniref_annotator.py' 2020-07-21T21:48:20,757 adding 'metawibele/characterize/uniref_annotator_stat.py' 2020-07-21T21:48:20,760 adding 'metawibele/characterize/uniref_protein.py' 2020-07-21T21:48:20,765 adding 'metawibele/characterize/uniref_protein_family.py' 2020-07-21T21:48:20,768 adding 'metawibele/characterize/utils.py' 2020-07-21T21:48:20,773 adding 'metawibele/common/__init__.py' 2020-07-21T21:48:20,775 adding 'metawibele/common/abundance_RPK.py' 2020-07-21T21:48:20,778 adding 'metawibele/common/abundance_filtering.py' 2020-07-21T21:48:20,781 adding 'metawibele/common/abundance_normalization.py' 2020-07-21T21:48:20,784 adding 'metawibele/common/abundance_smoothing.py' 2020-07-21T21:48:20,787 adding 'metawibele/common/combine_abundance_annotation.py' 2020-07-21T21:48:20,790 adding 'metawibele/common/download_config_file.py' 2020-07-21T21:48:20,793 adding 'metawibele/common/extract_abundance_feature_subset.py' 2020-07-21T21:48:20,796 adding 'metawibele/common/extract_abundance_sample_subset.py' 2020-07-21T21:48:20,799 adding 'metawibele/common/extract_uniprot_pfam.py' 2020-07-21T21:48:20,801 adding 'metawibele/common/filter_clusters.py' 2020-07-21T21:48:20,804 adding 'metawibele/common/filter_prevalence.py' 2020-07-21T21:48:20,807 adding 'metawibele/common/join_family_abundance.py' 2020-07-21T21:48:20,810 adding 'metawibele/common/prepare_domain_databases.py' 2020-07-21T21:48:20,813 adding 'metawibele/common/prepare_uniprot_annotation.py' 2020-07-21T21:48:20,817 adding 'metawibele/common/prepare_uniprot_taxonomy.py' 2020-07-21T21:48:20,821 adding 'metawibele/common/prepare_uniref_annotation.py' 2020-07-21T21:48:20,824 adding 'metawibele/common/split_family_abundance.py' 2020-07-21T21:48:20,827 adding 'metawibele/common/split_fasta_file.py' 2020-07-21T21:48:20,829 adding 'metawibele/common/transpose.py' 2020-07-21T21:48:20,833 adding 'metawibele/common/utils.py' 2020-07-21T21:48:20,837 adding 'metawibele/configs/MSPminer_setting.cfg' 2020-07-21T21:48:20,839 adding 'metawibele/configs/characterization.cfg' 2020-07-21T21:48:20,842 adding 'metawibele/configs/metawibele.cfg' 2020-07-21T21:48:20,845 adding 'metawibele/configs/prioritization.cfg' 2020-07-21T21:48:20,883 adding 'metawibele/data/domain/32_Uhlen_Lab_colon_rectum.txt.gz' 2020-07-21T21:48:20,909 adding 'metawibele/data/domain/Encode_sigmoid_colon.txt.gz' 2020-07-21T21:48:20,938 adding 'metawibele/data/domain/FANTOM5_colon_rectum.txt.gz' 2020-07-21T21:48:20,974 adding 'metawibele/data/domain/GTEx_sigmoid_transverse_colon.txt.gz' 2020-07-21T21:48:20,983 adding 'metawibele/data/domain/Human_protein_Atlas_colon_rectum.txt.gz' 2020-07-21T21:48:21,001 adding 'metawibele/data/domain/Human_proteome_map_colon_rectum.txt.gz' 2020-07-21T21:48:21,032 adding 'metawibele/data/domain/INTERACTION.txt.gz' 2020-07-21T21:48:21,059 adding 'metawibele/data/domain/Illumina_Body_Map_colon.txt.gz' 2020-07-21T21:48:21,063 adding 'metawibele/data/domain/README.txt' 2020-07-21T21:48:21,082 adding 'metawibele/data/domain/gene_ontology.txt.gz' 2020-07-21T21:48:21,526 adding 'metawibele/data/domain/pdb_chain_pfam.tsv.gz' 2020-07-21T21:48:26,444 adding 'metawibele/data/domain/pdb_chain_taxonomy.tsv.gz' 2020-07-21T21:48:26,825 adding 'metawibele/data/domain/pfam_descriptions.txt.gz' 2020-07-21T21:48:26,832 adding 'metawibele/data/misc/vignette_function.tsv' 2020-07-21T21:48:26,837 adding 'metawibele/data/uniref/README.txt' 2020-07-21T21:48:27,251 adding 'metawibele/data/uniref/uniprot_human_pfam.tsv.gz' 2020-07-21T21:48:27,285 adding 'metawibele/data/uniref/uniprot_taxaID_mammalia.txt.gz' 2020-07-21T21:48:27,604 adding 'metawibele/data/uniref/uniprot_taxaID_microbiome.txt.gz' 2020-07-21T21:48:36,794 adding 'metawibele/data/uniref/uniprot_taxonomy.tsv.gz' 2020-07-21T21:48:37,339 adding 'metawibele/prioritize/__init__.py' 2020-07-21T21:48:37,342 adding 'metawibele/prioritize/filter_prioritization.py' 2020-07-21T21:48:37,345 adding 'metawibele/prioritize/finalize_prioritization.py' 2020-07-21T21:48:37,350 adding 'metawibele/prioritize/quantify_prioritization.py' 2020-07-21T21:48:37,355 adding 'metawibele/tasks/__init__.py' 2020-07-21T21:48:37,365 adding 'metawibele/tasks/characterization.py' 2020-07-21T21:48:37,369 adding 'metawibele/tasks/prioritization.py' 2020-07-21T21:48:37,373 adding 'metawibele/tools/__init__.py' 2020-07-21T21:48:37,377 adding 'metawibele/tools/combine_gene_sequences.py' 2020-07-21T21:48:37,380 adding 'metawibele/tools/extract_cluster_CD_hit.py' 2020-07-21T21:48:37,383 adding 'metawibele/tools/extract_complete_ORF_seq.py' 2020-07-21T21:48:37,385 adding 'metawibele/tools/extract_non_redundance_seq.py' 2020-07-21T21:48:37,388 adding 'metawibele/tools/extract_protein_coding_genes.py' 2020-07-21T21:48:37,391 adding 'metawibele/tools/format_contig_sequences.py' 2020-07-21T21:48:37,394 adding 'metawibele/tools/format_protein_sequences.py' 2020-07-21T21:48:37,398 adding 'metawibele/tools/gene_abundance.py' 2020-07-21T21:48:37,400 adding 'metawibele/tools/gene_abundance_indexRef.py' 2020-07-21T21:48:37,403 adding 'metawibele/tools/gene_catalog_abundance.py' 2020-07-21T21:48:37,409 adding 'metawibele/tools/preprocessing_tasks.py' 2020-07-21T21:48:37,414 adding 'metawibele/workflows/characterize.py' 2020-07-21T21:48:37,417 adding 'metawibele/workflows/preprocess.py' 2020-07-21T21:48:37,421 adding 'metawibele/workflows/prioritize.py' 2020-07-21T21:48:37,427 adding 'metawibele-0.3.5.data/scripts/characterize.py' 2020-07-21T21:48:37,431 adding 'metawibele-0.3.5.data/scripts/preprocess.py' 2020-07-21T21:48:37,434 adding 'metawibele-0.3.5.data/scripts/prioritize.py' 2020-07-21T21:48:37,440 adding 'metawibele-0.3.5.dist-info/LICENSE' 2020-07-21T21:48:37,442 adding 'metawibele-0.3.5.dist-info/METADATA' 2020-07-21T21:48:37,445 adding 'metawibele-0.3.5.dist-info/WHEEL' 2020-07-21T21:48:37,447 adding 'metawibele-0.3.5.dist-info/entry_points.txt' 2020-07-21T21:48:37,449 adding 'metawibele-0.3.5.dist-info/top_level.txt' 2020-07-21T21:48:37,452 adding 'metawibele-0.3.5.dist-info/RECORD' 2020-07-21T21:48:43,764 removing build/bdist.linux-armv7l/wheel 2020-07-21T21:48:44,067 Building wheel for metawibele (setup.py): finished with status 'done' 2020-07-21T21:48:45,107 Created wheel for metawibele: filename=metawibele-0.3.5-py3-none-any.whl size=72571270 sha256=095d16bf0df2c8f7e8bc1a2f938b4ecc0f3a0fa8cf1b45726e57058fec015503 2020-07-21T21:48:45,107 Stored in directory: /tmp/pip-ephem-wheel-cache-22xbdv56/wheels/e9/10/4d/5dadf172307aff75747b8e6015ce03a7bd5b3f7d12607fac41 2020-07-21T21:48:45,111 Successfully built metawibele 2020-07-21T21:48:57,795 Removed build tracker: '/tmp/pip-req-tracker-qdhk0uwk'