2020-07-25T03:42:01,020 Created temporary directory: /tmp/pip-ephem-wheel-cache-o259m18v
2020-07-25T03:42:01,025 Created temporary directory: /tmp/pip-req-tracker-9xjesnnc
2020-07-25T03:42:01,026 Initialized build tracking at /tmp/pip-req-tracker-9xjesnnc
2020-07-25T03:42:01,029 Created build tracker: /tmp/pip-req-tracker-9xjesnnc
2020-07-25T03:42:01,030 Entered build tracker: /tmp/pip-req-tracker-9xjesnnc
2020-07-25T03:42:01,032 Created temporary directory: /tmp/pip-wheel-1jewyh4v
2020-07-25T03:42:01,056 1 location(s) to search for versions of CPAT:
2020-07-25T03:42:01,056 * https://pypi.org/simple/cpat/
2020-07-25T03:42:01,057 Fetching project page and analyzing links: https://pypi.org/simple/cpat/
2020-07-25T03:42:01,060 Getting page https://pypi.org/simple/cpat/
2020-07-25T03:42:01,066 Found index url https://pypi.org/simple
2020-07-25T03:42:01,456   Skipping link: No binaries permitted for CPAT: https://files.pythonhosted.org/packages/f3/1a/373580faed32b7d045b5107d32890fd4bde7cb0a2f9d9aadad72ecce297a/CPAT-1.2.4-py2-none-any.whl#sha256=355a48183f7c65dea963307edc9f23b7dbd3963fba57ab9441f4917d8ed24cd2 (from https://pypi.org/simple/cpat/) (requires-python:>=2.6, <3)
2020-07-25T03:42:01,459   Link requires a different Python (3.5.3 not in: '>=2.6, <3'): https://files.pythonhosted.org/packages/53/dd/f6e7fda49f3e64b68c606c480847fd06fbc364b77561cdb68482b41e163c/CPAT-1.2.4.tar.gz#sha256=6a552174f24531f7a391b6d330cf03990161941d31a535814139ea1ae3cd1444 (from https://pypi.org/simple/cpat/) (requires-python:>=2.6, <3)
2020-07-25T03:42:01,461   Skipping link: No binaries permitted for CPAT: https://files.pythonhosted.org/packages/52/4e/63b692096ba9b3f4b399897744b88685dd68be01ff8f341f5c59fd514e34/CPAT-2.0.0-py3-none-any.whl#sha256=fa0fdd9b5dea52f8a167051f06b776236b291347fa157d7ea2f17676d8d1406b (from https://pypi.org/simple/cpat/) (requires-python:>=3.5)
2020-07-25T03:42:01,464   Found link https://files.pythonhosted.org/packages/5c/ed/0cb7373f623f6e0d4a642f54cef717d4c78de339e0499ff57649a7c1f25f/CPAT-2.0.0.tar.gz#sha256=bcd1fd8543f51c45abeeccf4612f059b46ee56c5a75877db9c170bf221a5b8f4 (from https://pypi.org/simple/cpat/) (requires-python:>=3.5), version: 2.0.0
2020-07-25T03:42:01,466   Skipping link: No binaries permitted for CPAT: https://files.pythonhosted.org/packages/d9/3e/5f98d18bf2c39fd1c628840df032fedb5cde2eeaeafedb75398d69201ee1/CPAT-3.0.0-py3-none-any.whl#sha256=4b0154853e30583d8362a10435b8dc99bd1ca28c00a99850b4eab9154f7c3c05 (from https://pypi.org/simple/cpat/) (requires-python:>=3.5)
2020-07-25T03:42:01,468   Found link https://files.pythonhosted.org/packages/82/06/ed18d8ebfe5525a8db01b78f146efdcf7ee83a6304e7e581945266f201b3/CPAT-3.0.0.tar.gz#sha256=2880735bfbedc4a7cb70b1f600b457859aeac4743590c8d88a2d36c6a7c00c11 (from https://pypi.org/simple/cpat/) (requires-python:>=3.5), version: 3.0.0
2020-07-25T03:42:01,484 Given no hashes to check 1 links for project 'CPAT': discarding no candidates
2020-07-25T03:42:01,486 Using version 3.0.0 (newest of versions: 3.0.0)
2020-07-25T03:42:01,497 Collecting CPAT==3.0.0
2020-07-25T03:42:01,504   Created temporary directory: /tmp/pip-unpack-jy7kex_m
2020-07-25T03:42:03,647   Downloading CPAT-3.0.0.tar.gz (16.7 MB)
2020-07-25T03:42:14,295   Added CPAT==3.0.0 from https://files.pythonhosted.org/packages/82/06/ed18d8ebfe5525a8db01b78f146efdcf7ee83a6304e7e581945266f201b3/CPAT-3.0.0.tar.gz#sha256=2880735bfbedc4a7cb70b1f600b457859aeac4743590c8d88a2d36c6a7c00c11 to build tracker '/tmp/pip-req-tracker-9xjesnnc'
2020-07-25T03:42:14,299     Running setup.py (path:/tmp/pip-wheel-1jewyh4v/CPAT/setup.py) egg_info for package CPAT
2020-07-25T03:42:14,301     Created temporary directory: /tmp/pip-pip-egg-info-hcaxej9j
2020-07-25T03:42:14,301     Running command python setup.py egg_info
2020-07-25T03:42:23,397     running egg_info
2020-07-25T03:42:23,405     creating /tmp/pip-pip-egg-info-hcaxej9j/CPAT.egg-info
2020-07-25T03:42:23,408     writing /tmp/pip-pip-egg-info-hcaxej9j/CPAT.egg-info/PKG-INFO
2020-07-25T03:42:23,415     writing requirements to /tmp/pip-pip-egg-info-hcaxej9j/CPAT.egg-info/requires.txt
2020-07-25T03:42:23,417     writing dependency_links to /tmp/pip-pip-egg-info-hcaxej9j/CPAT.egg-info/dependency_links.txt
2020-07-25T03:42:23,420     writing top-level names to /tmp/pip-pip-egg-info-hcaxej9j/CPAT.egg-info/top_level.txt
2020-07-25T03:42:23,425     writing manifest file '/tmp/pip-pip-egg-info-hcaxej9j/CPAT.egg-info/SOURCES.txt'
2020-07-25T03:42:23,831     reading manifest file '/tmp/pip-pip-egg-info-hcaxej9j/CPAT.egg-info/SOURCES.txt'
2020-07-25T03:42:23,834     reading manifest template 'MANIFEST.in'
2020-07-25T03:42:23,838     warning: no files found matching 'distribute_setup.py'
2020-07-25T03:42:23,863     warning: no files found matching '*.pyx' under directory 'lib'
2020-07-25T03:42:23,887     warning: no files found matching '*.pxd' under directory 'lib'
2020-07-25T03:42:24,036     writing manifest file '/tmp/pip-pip-egg-info-hcaxej9j/CPAT.egg-info/SOURCES.txt'
2020-07-25T03:42:24,232   Source in /tmp/pip-wheel-1jewyh4v/CPAT has version 3.0.0, which satisfies requirement CPAT==3.0.0 from https://files.pythonhosted.org/packages/82/06/ed18d8ebfe5525a8db01b78f146efdcf7ee83a6304e7e581945266f201b3/CPAT-3.0.0.tar.gz#sha256=2880735bfbedc4a7cb70b1f600b457859aeac4743590c8d88a2d36c6a7c00c11
2020-07-25T03:42:24,234   Removed CPAT==3.0.0 from https://files.pythonhosted.org/packages/82/06/ed18d8ebfe5525a8db01b78f146efdcf7ee83a6304e7e581945266f201b3/CPAT-3.0.0.tar.gz#sha256=2880735bfbedc4a7cb70b1f600b457859aeac4743590c8d88a2d36c6a7c00c11 from build tracker '/tmp/pip-req-tracker-9xjesnnc'
2020-07-25T03:42:24,239 Building wheels for collected packages: CPAT
2020-07-25T03:42:24,249   Created temporary directory: /tmp/pip-wheel-i_jucdm9
2020-07-25T03:42:24,250   Building wheel for CPAT (setup.py): started
2020-07-25T03:42:24,251   Destination directory: /tmp/pip-wheel-i_jucdm9
2020-07-25T03:42:24,252   Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-1jewyh4v/CPAT/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-1jewyh4v/CPAT/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-i_jucdm9
2020-07-25T03:42:27,885   running bdist_wheel
2020-07-25T03:42:27,895   running build
2020-07-25T03:42:27,896   running build_py
2020-07-25T03:42:28,241   creating build
2020-07-25T03:42:28,243   creating build/lib
2020-07-25T03:42:28,247   copying lib/psyco_full.py -> build/lib
2020-07-25T03:42:28,254   creating build/lib/cpmodule
2020-07-25T03:42:28,257   copying lib/cpmodule/fickett.py -> build/lib/cpmodule
2020-07-25T03:42:28,263   copying lib/cpmodule/utils.py -> build/lib/cpmodule
2020-07-25T03:42:28,268   copying lib/cpmodule/FrameKmer.py -> build/lib/cpmodule
2020-07-25T03:42:28,273   copying lib/cpmodule/ireader.py -> build/lib/cpmodule
2020-07-25T03:42:28,279   copying lib/cpmodule/__init__.py -> build/lib/cpmodule
2020-07-25T03:42:28,283   copying lib/cpmodule/find_orfs.py -> build/lib/cpmodule
2020-07-25T03:42:28,291   running build_scripts
2020-07-25T03:42:28,293   creating build/scripts-3.5
2020-07-25T03:42:28,297   copying and adjusting bin/make_logitModel.py -> build/scripts-3.5
2020-07-25T03:42:28,304   copying and adjusting bin/make_hexamer_tab.py -> build/scripts-3.5
2020-07-25T03:42:28,309   copying and adjusting bin/cpat.py -> build/scripts-3.5
2020-07-25T03:42:28,314   changing mode of build/scripts-3.5/make_logitModel.py from 644 to 755
2020-07-25T03:42:28,315   changing mode of build/scripts-3.5/make_hexamer_tab.py from 644 to 755
2020-07-25T03:42:28,317   changing mode of build/scripts-3.5/cpat.py from 644 to 755
2020-07-25T03:42:28,323   installing to build/bdist.linux-armv7l/wheel
2020-07-25T03:42:28,324   running install
2020-07-25T03:42:28,328   running install_lib
2020-07-25T03:42:28,338   creating build/bdist.linux-armv7l
2020-07-25T03:42:28,340   creating build/bdist.linux-armv7l/wheel
2020-07-25T03:42:28,344   creating build/bdist.linux-armv7l/wheel/cpmodule
2020-07-25T03:42:28,348   copying build/lib/cpmodule/fickett.py -> build/bdist.linux-armv7l/wheel/cpmodule
2020-07-25T03:42:28,353   copying build/lib/cpmodule/utils.py -> build/bdist.linux-armv7l/wheel/cpmodule
2020-07-25T03:42:28,357   copying build/lib/cpmodule/FrameKmer.py -> build/bdist.linux-armv7l/wheel/cpmodule
2020-07-25T03:42:28,362   copying build/lib/cpmodule/ireader.py -> build/bdist.linux-armv7l/wheel/cpmodule
2020-07-25T03:42:28,366   copying build/lib/cpmodule/__init__.py -> build/bdist.linux-armv7l/wheel/cpmodule
2020-07-25T03:42:28,370   copying build/lib/cpmodule/find_orfs.py -> build/bdist.linux-armv7l/wheel/cpmodule
2020-07-25T03:42:28,374   copying build/lib/psyco_full.py -> build/bdist.linux-armv7l/wheel
2020-07-25T03:42:28,378   running install_egg_info
2020-07-25T03:42:28,391   running egg_info
2020-07-25T03:42:28,393   writing dependency_links to lib/CPAT.egg-info/dependency_links.txt
2020-07-25T03:42:28,395   writing lib/CPAT.egg-info/PKG-INFO
2020-07-25T03:42:28,400   writing requirements to lib/CPAT.egg-info/requires.txt
2020-07-25T03:42:28,404   writing top-level names to lib/CPAT.egg-info/top_level.txt
2020-07-25T03:42:28,416   reading manifest file 'lib/CPAT.egg-info/SOURCES.txt'
2020-07-25T03:42:28,495   reading manifest template 'MANIFEST.in'
2020-07-25T03:42:28,498   warning: no files found matching 'distribute_setup.py'
2020-07-25T03:42:28,521   warning: no files found matching '*.pyx' under directory 'lib'
2020-07-25T03:42:28,544   warning: no files found matching '*.pxd' under directory 'lib'
2020-07-25T03:42:28,710   writing manifest file 'lib/CPAT.egg-info/SOURCES.txt'
2020-07-25T03:42:28,715   Copying lib/CPAT.egg-info to build/bdist.linux-armv7l/wheel/CPAT-3.0.0-py3.5.egg-info
2020-07-25T03:42:28,748   running install_scripts
2020-07-25T03:42:28,750   creating build/bdist.linux-armv7l/wheel/CPAT-3.0.0.data
2020-07-25T03:42:28,751   creating build/bdist.linux-armv7l/wheel/CPAT-3.0.0.data/scripts
2020-07-25T03:42:28,754   copying build/scripts-3.5/make_logitModel.py -> build/bdist.linux-armv7l/wheel/CPAT-3.0.0.data/scripts
2020-07-25T03:42:28,760   copying build/scripts-3.5/make_hexamer_tab.py -> build/bdist.linux-armv7l/wheel/CPAT-3.0.0.data/scripts
2020-07-25T03:42:28,764   copying build/scripts-3.5/cpat.py -> build/bdist.linux-armv7l/wheel/CPAT-3.0.0.data/scripts
2020-07-25T03:42:28,770   changing mode of build/bdist.linux-armv7l/wheel/CPAT-3.0.0.data/scripts/make_logitModel.py to 755
2020-07-25T03:42:28,771   changing mode of build/bdist.linux-armv7l/wheel/CPAT-3.0.0.data/scripts/make_hexamer_tab.py to 755
2020-07-25T03:42:28,771   changing mode of build/bdist.linux-armv7l/wheel/CPAT-3.0.0.data/scripts/cpat.py to 755
2020-07-25T03:42:28,824   creating build/bdist.linux-armv7l/wheel/CPAT-3.0.0.dist-info/WHEEL
2020-07-25T03:42:29,089   Building wheel for CPAT (setup.py): finished with status 'done'
2020-07-25T03:42:29,093   Created wheel for CPAT: filename=CPAT-3.0.0-py3-none-any.whl size=17718 sha256=3790b74aa5103ae2aaa45252add8d8140f726b8535a6c24fe56c13be9afa2d85
2020-07-25T03:42:29,094   Stored in directory: /tmp/pip-ephem-wheel-cache-o259m18v/wheels/83/b3/5c/5a7f1f53e279aa71538f637623161b77c50fc371f532df5488
2020-07-25T03:42:29,099 Successfully built CPAT
2020-07-25T03:42:29,109 Removed build tracker: '/tmp/pip-req-tracker-9xjesnnc'