2020-07-27T16:48:52,751 Created temporary directory: /tmp/pip-ephem-wheel-cache-31ecq17m 2020-07-27T16:48:52,756 Created temporary directory: /tmp/pip-req-tracker-vidvrs0z 2020-07-27T16:48:52,757 Initialized build tracking at /tmp/pip-req-tracker-vidvrs0z 2020-07-27T16:48:52,759 Created build tracker: /tmp/pip-req-tracker-vidvrs0z 2020-07-27T16:48:52,759 Entered build tracker: /tmp/pip-req-tracker-vidvrs0z 2020-07-27T16:48:52,760 Created temporary directory: /tmp/pip-wheel-d2tk2qty 2020-07-27T16:48:52,779 1 location(s) to search for versions of TEtranscripts: 2020-07-27T16:48:52,779 * https://pypi.org/simple/tetranscripts/ 2020-07-27T16:48:52,780 Fetching project page and analyzing links: https://pypi.org/simple/tetranscripts/ 2020-07-27T16:48:52,782 Getting page https://pypi.org/simple/tetranscripts/ 2020-07-27T16:48:52,786 Found index url https://pypi.org/simple 2020-07-27T16:48:53,109 Skipping link: No binaries permitted for TEtranscripts: https://files.pythonhosted.org/packages/31/61/34e7ab36639f60d9296d32d24ad103ce9d1781a43f748af4257bdffca06f/TEtranscripts-2.0.4-py2-none-any.whl#sha256=4878dd229eedff32b41134d5e064dfbb72712f5078c6646a23fa26876ba86cc4 (from https://pypi.org/simple/tetranscripts/) 2020-07-27T16:48:53,110 Found link https://files.pythonhosted.org/packages/a6/65/13b271f89f957d0d5244b23cd3b8d82232c764718cf39efb919239194516/TEtranscripts-2.0.4.tar.gz#sha256=eeccacb676558a9c5429adca8f9f85fa0bc3a88b9164fb096243d6b8f9a5923a (from https://pypi.org/simple/tetranscripts/), version: 2.0.4 2020-07-27T16:48:53,111 Found link https://files.pythonhosted.org/packages/61/c8/ae78d2f8de688be200b33d7c69bbc9814718543ce44b79e25335c2dd36d8/TEtranscripts-2.0.5.tar.gz#sha256=d58c00475fc6e171095c639fdd1634f742378f0885cd4621ef137bc1fbc3e193 (from https://pypi.org/simple/tetranscripts/), version: 2.0.5 2020-07-27T16:48:53,112 Found link https://files.pythonhosted.org/packages/d4/52/afde9894514bfa59b85e14140a04956467dfd44c8b0016c50544d970312b/TEtranscripts-2.1.0.tar.gz#sha256=b8ac3c0d343c69538e4eda6bae8221f64edfbd67c793aa8e0c9e9d85305272ce (from https://pypi.org/simple/tetranscripts/), version: 2.1.0 2020-07-27T16:48:53,113 Found link https://files.pythonhosted.org/packages/3c/f3/bc59e3b4698866ee3bca10b59d185013d92240e01be562702e3ccafe78e4/TEtranscripts-2.1.1.tar.gz#sha256=4359753ab7e3f58342853e2db5e9b52ca2c810d379d90ee27ab1fc096d9e2e46 (from https://pypi.org/simple/tetranscripts/), version: 2.1.1 2020-07-27T16:48:53,113 Found link https://files.pythonhosted.org/packages/82/78/cdd268033ece59dbe24bb31b4f48dbe2cb5b1569f234397af5f544e39cf8/TEtranscripts-2.1.2.tar.gz#sha256=f5ad6e7cb18bb5528cc6b0c72d812a9eebe3996389599255a4a661f4a93706e3 (from https://pypi.org/simple/tetranscripts/), version: 2.1.2 2020-07-27T16:48:53,114 Found link https://files.pythonhosted.org/packages/1f/c8/bbd050576593147271cc85009337950389cbc38167db6f63f0119abd3f49/TEtranscripts-2.1.3.tar.gz#sha256=2315d8478ba811f6f52a71ff7c5f17703ad9dbdace8c2a67d4d70ad160f6df09 (from https://pypi.org/simple/tetranscripts/), version: 2.1.3 2020-07-27T16:48:53,115 Found link https://files.pythonhosted.org/packages/44/43/40825b98484eee5eac602c24ec63cf9548447051180f1086790d5a4d428e/TEtranscripts-2.1.4.tar.gz#sha256=afbff101de3ebd42f35fed9e20e8ba5f958d426964f8052641d5add81cff475e (from https://pypi.org/simple/tetranscripts/), version: 2.1.4 2020-07-27T16:48:53,116 Found link https://files.pythonhosted.org/packages/a1/63/af12dbff59806fb31decf01a40a1a701506a8d7571733933838995da2fe4/TEtranscripts-2.2.0.tar.gz#sha256=ae39b5f2edfd007b0bc3c97904bffeca51c88f666f5f4edb5bc6cde32dfe30b8 (from https://pypi.org/simple/tetranscripts/), version: 2.2.0 2020-07-27T16:48:53,117 Found link https://files.pythonhosted.org/packages/eb/40/9c54ccd1976bc41cfe04b29aa0f4cfaa113677aca6044fea954d6a145e2f/TEtranscripts-2.2.1.tar.gz#sha256=1bd2534be2575d6a21bae35010d91ef8d4271ff4aaaf14029338f6072c3bee98 (from https://pypi.org/simple/tetranscripts/), version: 2.2.1 2020-07-27T16:48:53,129 Given no hashes to check 1 links for project 'TEtranscripts': discarding no candidates 2020-07-27T16:48:53,131 Using version 2.2.1 (newest of versions: 2.2.1) 2020-07-27T16:48:53,138 Collecting TEtranscripts==2.2.1 2020-07-27T16:48:53,142 Created temporary directory: /tmp/pip-unpack-_8ywwm64 2020-07-27T16:48:53,365 Downloading TEtranscripts-2.2.1.tar.gz (94 kB) 2020-07-27T16:48:53,635 Added TEtranscripts==2.2.1 from https://files.pythonhosted.org/packages/eb/40/9c54ccd1976bc41cfe04b29aa0f4cfaa113677aca6044fea954d6a145e2f/TEtranscripts-2.2.1.tar.gz#sha256=1bd2534be2575d6a21bae35010d91ef8d4271ff4aaaf14029338f6072c3bee98 to build tracker '/tmp/pip-req-tracker-vidvrs0z' 2020-07-27T16:48:53,637 Running setup.py (path:/tmp/pip-wheel-d2tk2qty/TEtranscripts/setup.py) egg_info for package TEtranscripts 2020-07-27T16:48:53,639 Created temporary directory: /tmp/pip-pip-egg-info-2t80onyc 2020-07-27T16:48:53,639 Running command python setup.py egg_info 2020-07-27T16:48:55,779 running egg_info 2020-07-27T16:48:55,784 creating /tmp/pip-pip-egg-info-2t80onyc/TEtranscripts.egg-info 2020-07-27T16:48:55,786 writing top-level names to /tmp/pip-pip-egg-info-2t80onyc/TEtranscripts.egg-info/top_level.txt 2020-07-27T16:48:55,791 writing requirements to /tmp/pip-pip-egg-info-2t80onyc/TEtranscripts.egg-info/requires.txt 2020-07-27T16:48:55,793 writing dependency_links to /tmp/pip-pip-egg-info-2t80onyc/TEtranscripts.egg-info/dependency_links.txt 2020-07-27T16:48:55,794 writing /tmp/pip-pip-egg-info-2t80onyc/TEtranscripts.egg-info/PKG-INFO 2020-07-27T16:48:55,804 writing manifest file '/tmp/pip-pip-egg-info-2t80onyc/TEtranscripts.egg-info/SOURCES.txt' 2020-07-27T16:48:56,176 reading manifest file '/tmp/pip-pip-egg-info-2t80onyc/TEtranscripts.egg-info/SOURCES.txt' 2020-07-27T16:48:56,179 reading manifest template 'MANIFEST.in' 2020-07-27T16:48:56,189 writing manifest file '/tmp/pip-pip-egg-info-2t80onyc/TEtranscripts.egg-info/SOURCES.txt' 2020-07-27T16:48:56,331 Source in /tmp/pip-wheel-d2tk2qty/TEtranscripts has version 2.2.1, which satisfies requirement TEtranscripts==2.2.1 from https://files.pythonhosted.org/packages/eb/40/9c54ccd1976bc41cfe04b29aa0f4cfaa113677aca6044fea954d6a145e2f/TEtranscripts-2.2.1.tar.gz#sha256=1bd2534be2575d6a21bae35010d91ef8d4271ff4aaaf14029338f6072c3bee98 2020-07-27T16:48:56,332 Removed TEtranscripts==2.2.1 from https://files.pythonhosted.org/packages/eb/40/9c54ccd1976bc41cfe04b29aa0f4cfaa113677aca6044fea954d6a145e2f/TEtranscripts-2.2.1.tar.gz#sha256=1bd2534be2575d6a21bae35010d91ef8d4271ff4aaaf14029338f6072c3bee98 from build tracker '/tmp/pip-req-tracker-vidvrs0z' 2020-07-27T16:48:56,342 Building wheels for collected packages: TEtranscripts 2020-07-27T16:48:56,351 Created temporary directory: /tmp/pip-wheel-3u845bwe 2020-07-27T16:48:56,352 Building wheel for TEtranscripts (setup.py): started 2020-07-27T16:48:56,352 Destination directory: /tmp/pip-wheel-3u845bwe 2020-07-27T16:48:56,353 Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-d2tk2qty/TEtranscripts/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-d2tk2qty/TEtranscripts/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-3u845bwe 2020-07-27T16:48:58,513 running bdist_wheel 2020-07-27T16:48:58,529 running build 2020-07-27T16:48:58,530 running build_py 2020-07-27T16:48:58,873 creating build 2020-07-27T16:48:58,874 creating build/lib 2020-07-27T16:48:58,877 creating build/lib/TEToolkit 2020-07-27T16:48:58,880 copying TEToolkit/EMAlgorithm.py -> build/lib/TEToolkit 2020-07-27T16:48:58,886 copying TEToolkit/TEindex.py -> build/lib/TEToolkit 2020-07-27T16:48:58,892 copying TEToolkit/Prob.py -> build/lib/TEToolkit 2020-07-27T16:48:58,899 copying TEToolkit/IntervalTree.py -> build/lib/TEToolkit 2020-07-27T16:48:58,905 copying TEToolkit/__init__.py -> build/lib/TEToolkit 2020-07-27T16:48:58,911 copying TEToolkit/Common.py -> build/lib/TEToolkit 2020-07-27T16:48:58,917 copying TEToolkit/Constants.py -> build/lib/TEToolkit 2020-07-27T16:48:58,924 copying TEToolkit/GeneFeatures.py -> build/lib/TEToolkit 2020-07-27T16:48:58,929 copying TEToolkit/Normalization.py -> build/lib/TEToolkit 2020-07-27T16:48:58,937 creating build/lib/TEToolkit/IO 2020-07-27T16:48:58,939 copying TEToolkit/IO/__init__.py -> build/lib/TEToolkit/IO 2020-07-27T16:48:58,943 copying TEToolkit/IO/FeatIO.py -> build/lib/TEToolkit/IO 2020-07-27T16:48:58,951 copying TEToolkit/IO/ReadInputs.py -> build/lib/TEToolkit/IO 2020-07-27T16:48:58,959 creating build/lib/TEToolkit/ShortRead 2020-07-27T16:48:58,962 copying TEToolkit/ShortRead/ParseBEDFile.py -> build/lib/TEToolkit/ShortRead 2020-07-27T16:48:58,972 copying TEToolkit/ShortRead/__init__.py -> build/lib/TEToolkit/ShortRead 2020-07-27T16:48:58,977 running egg_info 2020-07-27T16:48:59,009 writing requirements to TEtranscripts.egg-info/requires.txt 2020-07-27T16:48:59,013 writing dependency_links to TEtranscripts.egg-info/dependency_links.txt 2020-07-27T16:48:59,017 writing top-level names to TEtranscripts.egg-info/top_level.txt 2020-07-27T16:48:59,020 writing TEtranscripts.egg-info/PKG-INFO 2020-07-27T16:48:59,038 reading manifest file 'TEtranscripts.egg-info/SOURCES.txt' 2020-07-27T16:48:59,046 reading manifest template 'MANIFEST.in' 2020-07-27T16:48:59,057 writing manifest file 'TEtranscripts.egg-info/SOURCES.txt' 2020-07-27T16:48:59,065 running build_scripts 2020-07-27T16:48:59,067 creating build/scripts-3.5 2020-07-27T16:48:59,071 copying and adjusting bin/TEtranscripts -> build/scripts-3.5 2020-07-27T16:48:59,081 copying and adjusting bin/TEcount -> build/scripts-3.5 2020-07-27T16:48:59,087 changing mode of build/scripts-3.5/TEtranscripts from 644 to 755 2020-07-27T16:48:59,089 changing mode of build/scripts-3.5/TEcount from 644 to 755 2020-07-27T16:48:59,098 installing to build/bdist.linux-armv7l/wheel 2020-07-27T16:48:59,099 running install 2020-07-27T16:48:59,102 running install_lib 2020-07-27T16:48:59,111 creating build/bdist.linux-armv7l 2020-07-27T16:48:59,113 creating build/bdist.linux-armv7l/wheel 2020-07-27T16:48:59,118 creating build/bdist.linux-armv7l/wheel/TEToolkit 2020-07-27T16:48:59,121 copying build/lib/TEToolkit/EMAlgorithm.py -> build/bdist.linux-armv7l/wheel/TEToolkit 2020-07-27T16:48:59,127 copying build/lib/TEToolkit/TEindex.py -> build/bdist.linux-armv7l/wheel/TEToolkit 2020-07-27T16:48:59,134 copying build/lib/TEToolkit/Prob.py -> build/bdist.linux-armv7l/wheel/TEToolkit 2020-07-27T16:48:59,140 copying build/lib/TEToolkit/IntervalTree.py -> build/bdist.linux-armv7l/wheel/TEToolkit 2020-07-27T16:48:59,147 creating build/bdist.linux-armv7l/wheel/TEToolkit/IO 2020-07-27T16:48:59,150 copying build/lib/TEToolkit/IO/__init__.py -> build/bdist.linux-armv7l/wheel/TEToolkit/IO 2020-07-27T16:48:59,154 copying build/lib/TEToolkit/IO/FeatIO.py -> build/bdist.linux-armv7l/wheel/TEToolkit/IO 2020-07-27T16:48:59,162 copying build/lib/TEToolkit/IO/ReadInputs.py -> build/bdist.linux-armv7l/wheel/TEToolkit/IO 2020-07-27T16:48:59,169 copying build/lib/TEToolkit/__init__.py -> build/bdist.linux-armv7l/wheel/TEToolkit 2020-07-27T16:48:59,174 copying build/lib/TEToolkit/Common.py -> build/bdist.linux-armv7l/wheel/TEToolkit 2020-07-27T16:48:59,178 copying build/lib/TEToolkit/Constants.py -> build/bdist.linux-armv7l/wheel/TEToolkit 2020-07-27T16:48:59,185 creating build/bdist.linux-armv7l/wheel/TEToolkit/ShortRead 2020-07-27T16:48:59,188 copying build/lib/TEToolkit/ShortRead/ParseBEDFile.py -> build/bdist.linux-armv7l/wheel/TEToolkit/ShortRead 2020-07-27T16:48:59,196 copying build/lib/TEToolkit/ShortRead/__init__.py -> build/bdist.linux-armv7l/wheel/TEToolkit/ShortRead 2020-07-27T16:48:59,200 copying build/lib/TEToolkit/GeneFeatures.py -> build/bdist.linux-armv7l/wheel/TEToolkit 2020-07-27T16:48:59,206 copying build/lib/TEToolkit/Normalization.py -> build/bdist.linux-armv7l/wheel/TEToolkit 2020-07-27T16:48:59,212 running install_egg_info 2020-07-27T16:48:59,230 Copying TEtranscripts.egg-info to build/bdist.linux-armv7l/wheel/TEtranscripts-2.2.1-py3.5.egg-info 2020-07-27T16:48:59,262 running install_scripts 2020-07-27T16:48:59,395 creating build/bdist.linux-armv7l/wheel/TEtranscripts-2.2.1.data 2020-07-27T16:48:59,396 creating build/bdist.linux-armv7l/wheel/TEtranscripts-2.2.1.data/scripts 2020-07-27T16:48:59,399 copying build/scripts-3.5/TEcount -> build/bdist.linux-armv7l/wheel/TEtranscripts-2.2.1.data/scripts 2020-07-27T16:48:59,407 copying build/scripts-3.5/TEtranscripts -> build/bdist.linux-armv7l/wheel/TEtranscripts-2.2.1.data/scripts 2020-07-27T16:48:59,415 changing mode of build/bdist.linux-armv7l/wheel/TEtranscripts-2.2.1.data/scripts/TEcount to 755 2020-07-27T16:48:59,416 changing mode of build/bdist.linux-armv7l/wheel/TEtranscripts-2.2.1.data/scripts/TEtranscripts to 755 2020-07-27T16:48:59,493 creating build/bdist.linux-armv7l/wheel/TEtranscripts-2.2.1.dist-info/WHEEL 2020-07-27T16:48:59,841 Building wheel for TEtranscripts (setup.py): finished with status 'done' 2020-07-27T16:48:59,846 Created wheel for TEtranscripts: filename=TEtranscripts-2.2.1-py3-none-any.whl size=60279 sha256=70ac6dabedab967fb2c3020f22c73be5aee37d2e206d2cf91190696f77547a9c 2020-07-27T16:48:59,847 Stored in directory: /tmp/pip-ephem-wheel-cache-31ecq17m/wheels/20/08/61/3ab751d454c30344c9e34c65dc774c261165451e91889a9944 2020-07-27T16:48:59,850 Successfully built TEtranscripts 2020-07-27T16:48:59,867 Removed build tracker: '/tmp/pip-req-tracker-vidvrs0z'