2020-07-29T13:48:34,263 Created temporary directory: /tmp/pip-ephem-wheel-cache-7rg9n7k0 2020-07-29T13:48:34,268 Created temporary directory: /tmp/pip-req-tracker-teeungmr 2020-07-29T13:48:34,268 Initialized build tracking at /tmp/pip-req-tracker-teeungmr 2020-07-29T13:48:34,269 Created build tracker: /tmp/pip-req-tracker-teeungmr 2020-07-29T13:48:34,269 Entered build tracker: /tmp/pip-req-tracker-teeungmr 2020-07-29T13:48:34,271 Created temporary directory: /tmp/pip-wheel-gdrgydqz 2020-07-29T13:48:34,288 1 location(s) to search for versions of hamstr1s: 2020-07-29T13:48:34,288 * https://pypi.org/simple/hamstr1s/ 2020-07-29T13:48:34,288 Fetching project page and analyzing links: https://pypi.org/simple/hamstr1s/ 2020-07-29T13:48:34,289 Getting page https://pypi.org/simple/hamstr1s/ 2020-07-29T13:48:34,292 Found index url https://pypi.org/simple 2020-07-29T13:48:34,498 Skipping link: No binaries permitted for hamstr1s: https://files.pythonhosted.org/packages/22/c1/3f9da4f129bfce9fe52b5c9e5c2eeb976822620701633b5011088d498b0a/hamstr1s-2.0.0-py3-none-any.whl#sha256=7285b2fa96cafcc639f10f83a182fa71fcc592b8949424708f8a79d7f21776eb (from https://pypi.org/simple/hamstr1s/) (requires-python:>=3.7.0) 2020-07-29T13:48:34,499 Found link https://files.pythonhosted.org/packages/ff/09/07fef18c86498dd8f2e6e9ff807f6adc15f9d66ac9f5c8b2172bdd696926/hamstr1s-2.0.0.tar.gz#sha256=cc4e8d6f8e8653f0ed9c97ed6fbc1f3a8a383231f21c1fbe0e6bb226b2db4933 (from https://pypi.org/simple/hamstr1s/) (requires-python:>=3.7.0), version: 2.0.0 2020-07-29T13:48:34,500 Skipping link: No binaries permitted for hamstr1s: https://files.pythonhosted.org/packages/26/e5/e04fa6cd53143a1f409885a552d9b55b3397995f9e4ee82c005172ca72eb/hamstr1s-2.0.1-py3-none-any.whl#sha256=dd6a8123e430d831cde555eab8a89ff2f2b8658c017063fb34d19b7b61dfdbf0 (from https://pypi.org/simple/hamstr1s/) (requires-python:>=3.7.0) 2020-07-29T13:48:34,501 Found link https://files.pythonhosted.org/packages/a6/79/2b5dc63be47dbbd7436b84723b8bd21d9b588c4452e77b6a7aa4c4c9d080/hamstr1s-2.0.1.tar.gz#sha256=b0769b605d1e199adae8ee244727f65fb5560ea486d8ac1aee0e6feaa617041a (from https://pypi.org/simple/hamstr1s/) (requires-python:>=3.7.0), version: 2.0.1 2020-07-29T13:48:34,508 Given no hashes to check 1 links for project 'hamstr1s': discarding no candidates 2020-07-29T13:48:34,510 Using version 2.0.1 (newest of versions: 2.0.1) 2020-07-29T13:48:34,515 Collecting hamstr1s==2.0.1 2020-07-29T13:48:34,519 Created temporary directory: /tmp/pip-unpack-ef4lg92r 2020-07-29T13:48:34,730 Downloading hamstr1s-2.0.1.tar.gz (79 kB) 2020-07-29T13:48:34,986 Added hamstr1s==2.0.1 from https://files.pythonhosted.org/packages/a6/79/2b5dc63be47dbbd7436b84723b8bd21d9b588c4452e77b6a7aa4c4c9d080/hamstr1s-2.0.1.tar.gz#sha256=b0769b605d1e199adae8ee244727f65fb5560ea486d8ac1aee0e6feaa617041a to build tracker '/tmp/pip-req-tracker-teeungmr' 2020-07-29T13:48:34,989 Running setup.py (path:/tmp/pip-wheel-gdrgydqz/hamstr1s/setup.py) egg_info for package hamstr1s 2020-07-29T13:48:34,991 Created temporary directory: /tmp/pip-pip-egg-info-pwtaljrm 2020-07-29T13:48:34,991 Running command python setup.py egg_info 2020-07-29T13:48:36,979 running egg_info 2020-07-29T13:48:36,983 creating /tmp/pip-pip-egg-info-pwtaljrm/hamstr1s.egg-info 2020-07-29T13:48:37,001 writing /tmp/pip-pip-egg-info-pwtaljrm/hamstr1s.egg-info/PKG-INFO 2020-07-29T13:48:37,007 writing dependency_links to /tmp/pip-pip-egg-info-pwtaljrm/hamstr1s.egg-info/dependency_links.txt 2020-07-29T13:48:37,010 writing entry points to /tmp/pip-pip-egg-info-pwtaljrm/hamstr1s.egg-info/entry_points.txt 2020-07-29T13:48:37,013 writing requirements to /tmp/pip-pip-egg-info-pwtaljrm/hamstr1s.egg-info/requires.txt 2020-07-29T13:48:37,015 writing top-level names to /tmp/pip-pip-egg-info-pwtaljrm/hamstr1s.egg-info/top_level.txt 2020-07-29T13:48:37,019 writing manifest file '/tmp/pip-pip-egg-info-pwtaljrm/hamstr1s.egg-info/SOURCES.txt' 2020-07-29T13:48:37,322 reading manifest file '/tmp/pip-pip-egg-info-pwtaljrm/hamstr1s.egg-info/SOURCES.txt' 2020-07-29T13:48:37,325 reading manifest template 'MANIFEST.in' 2020-07-29T13:48:37,355 writing manifest file '/tmp/pip-pip-egg-info-pwtaljrm/hamstr1s.egg-info/SOURCES.txt' 2020-07-29T13:48:37,479 Source in /tmp/pip-wheel-gdrgydqz/hamstr1s has version 2.0.1, which satisfies requirement hamstr1s==2.0.1 from https://files.pythonhosted.org/packages/a6/79/2b5dc63be47dbbd7436b84723b8bd21d9b588c4452e77b6a7aa4c4c9d080/hamstr1s-2.0.1.tar.gz#sha256=b0769b605d1e199adae8ee244727f65fb5560ea486d8ac1aee0e6feaa617041a 2020-07-29T13:48:37,481 Removed hamstr1s==2.0.1 from https://files.pythonhosted.org/packages/a6/79/2b5dc63be47dbbd7436b84723b8bd21d9b588c4452e77b6a7aa4c4c9d080/hamstr1s-2.0.1.tar.gz#sha256=b0769b605d1e199adae8ee244727f65fb5560ea486d8ac1aee0e6feaa617041a from build tracker '/tmp/pip-req-tracker-teeungmr' 2020-07-29T13:48:37,486 Building wheels for collected packages: hamstr1s 2020-07-29T13:48:37,496 Created temporary directory: /tmp/pip-wheel-u2en4l_9 2020-07-29T13:48:37,497 Building wheel for hamstr1s (setup.py): started 2020-07-29T13:48:37,497 Destination directory: /tmp/pip-wheel-u2en4l_9 2020-07-29T13:48:37,498 Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-gdrgydqz/hamstr1s/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-gdrgydqz/hamstr1s/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-u2en4l_9 2020-07-29T13:48:39,407 running bdist_wheel 2020-07-29T13:48:39,421 running build 2020-07-29T13:48:39,422 running build_py 2020-07-29T13:48:39,693 creating build 2020-07-29T13:48:39,693 creating build/lib 2020-07-29T13:48:39,695 creating build/lib/hamstr1s 2020-07-29T13:48:39,697 copying hamstr1s/setupOneseq.py -> build/lib/hamstr1s 2020-07-29T13:48:39,702 copying hamstr1s/mergePhyloprofileData.py -> build/lib/hamstr1s 2020-07-29T13:48:39,706 copying hamstr1s/addTaxaHamstr.py -> build/lib/hamstr1s 2020-07-29T13:48:39,710 copying hamstr1s/addTaxonHamstr.py -> build/lib/hamstr1s 2020-07-29T13:48:39,715 copying hamstr1s/__init__.py -> build/lib/hamstr1s 2020-07-29T13:48:39,719 copying hamstr1s/runOneseq.py -> build/lib/hamstr1s 2020-07-29T13:48:39,726 copying hamstr1s/checkDataHamstr.py -> build/lib/hamstr1s 2020-07-29T13:48:39,734 creating build/lib/hamstr1s/bin 2020-07-29T13:48:39,736 copying hamstr1s/bin/__init__.py -> build/lib/hamstr1s/bin 2020-07-29T13:48:39,742 creating build/lib/hamstr1s/data 2020-07-29T13:48:39,744 copying hamstr1s/data/__init__.py -> build/lib/hamstr1s/data 2020-07-29T13:48:39,750 creating build/lib/hamstr1s/setup 2020-07-29T13:48:39,753 copying hamstr1s/setup/__init__.py -> build/lib/hamstr1s/setup 2020-07-29T13:48:39,771 copying hamstr1s/bin/run_genewise_hamstr.pm -> build/lib/hamstr1s/bin 2020-07-29T13:48:39,776 copying hamstr1s/bin/hamstr.pl -> build/lib/hamstr1s/bin 2020-07-29T13:48:39,789 copying hamstr1s/bin/translate.pl -> build/lib/hamstr1s/bin 2020-07-29T13:48:39,794 copying hamstr1s/bin/oneSeq.pl -> build/lib/hamstr1s/bin 2020-07-29T13:48:39,809 copying hamstr1s/bin/Filehandler.pm -> build/lib/hamstr1s/bin 2020-07-29T13:48:39,816 copying hamstr1s/data/infile.fa -> build/lib/hamstr1s/data 2020-07-29T13:48:39,824 copying hamstr1s/setup/install_lib.sh -> build/lib/hamstr1s/setup 2020-07-29T13:48:39,830 copying hamstr1s/setup/setup.sh -> build/lib/hamstr1s/setup 2020-07-29T13:48:39,838 copying hamstr1s/setup/indexTaxonomy.pl -> build/lib/hamstr1s/setup 2020-07-29T13:48:39,846 copying hamstr1s/setup/setup_conda.sh -> build/lib/hamstr1s/setup 2020-07-29T13:48:39,867 installing to build/bdist.linux-armv7l/wheel 2020-07-29T13:48:39,867 running install 2020-07-29T13:48:39,869 running install_lib 2020-07-29T13:48:39,876 creating build/bdist.linux-armv7l 2020-07-29T13:48:39,877 creating build/bdist.linux-armv7l/wheel 2020-07-29T13:48:39,881 creating build/bdist.linux-armv7l/wheel/hamstr1s 2020-07-29T13:48:39,884 copying build/lib/hamstr1s/setupOneseq.py -> build/bdist.linux-armv7l/wheel/hamstr1s 2020-07-29T13:48:39,888 copying build/lib/hamstr1s/mergePhyloprofileData.py -> build/bdist.linux-armv7l/wheel/hamstr1s 2020-07-29T13:48:39,892 copying build/lib/hamstr1s/addTaxaHamstr.py -> build/bdist.linux-armv7l/wheel/hamstr1s 2020-07-29T13:48:39,899 creating build/bdist.linux-armv7l/wheel/hamstr1s/bin 2020-07-29T13:48:39,901 copying build/lib/hamstr1s/bin/run_genewise_hamstr.pm -> build/bdist.linux-armv7l/wheel/hamstr1s/bin 2020-07-29T13:48:39,907 copying build/lib/hamstr1s/bin/hamstr.pl -> build/bdist.linux-armv7l/wheel/hamstr1s/bin 2020-07-29T13:48:39,921 copying build/lib/hamstr1s/bin/translate.pl -> build/bdist.linux-armv7l/wheel/hamstr1s/bin 2020-07-29T13:48:39,928 copying build/lib/hamstr1s/bin/oneSeq.pl -> build/bdist.linux-armv7l/wheel/hamstr1s/bin 2020-07-29T13:48:39,942 copying build/lib/hamstr1s/bin/Filehandler.pm -> build/bdist.linux-armv7l/wheel/hamstr1s/bin 2020-07-29T13:48:39,946 copying build/lib/hamstr1s/bin/__init__.py -> build/bdist.linux-armv7l/wheel/hamstr1s/bin 2020-07-29T13:48:39,951 creating build/bdist.linux-armv7l/wheel/hamstr1s/data 2020-07-29T13:48:39,952 copying build/lib/hamstr1s/data/infile.fa -> build/bdist.linux-armv7l/wheel/hamstr1s/data 2020-07-29T13:48:39,957 copying build/lib/hamstr1s/data/__init__.py -> build/bdist.linux-armv7l/wheel/hamstr1s/data 2020-07-29T13:48:39,960 copying build/lib/hamstr1s/addTaxonHamstr.py -> build/bdist.linux-armv7l/wheel/hamstr1s 2020-07-29T13:48:39,966 copying build/lib/hamstr1s/__init__.py -> build/bdist.linux-armv7l/wheel/hamstr1s 2020-07-29T13:48:39,971 copying build/lib/hamstr1s/runOneseq.py -> build/bdist.linux-armv7l/wheel/hamstr1s 2020-07-29T13:48:39,980 creating build/bdist.linux-armv7l/wheel/hamstr1s/setup 2020-07-29T13:48:39,982 copying build/lib/hamstr1s/setup/install_lib.sh -> build/bdist.linux-armv7l/wheel/hamstr1s/setup 2020-07-29T13:48:39,987 copying build/lib/hamstr1s/setup/setup.sh -> build/bdist.linux-armv7l/wheel/hamstr1s/setup 2020-07-29T13:48:39,993 copying build/lib/hamstr1s/setup/indexTaxonomy.pl -> build/bdist.linux-armv7l/wheel/hamstr1s/setup 2020-07-29T13:48:39,997 copying build/lib/hamstr1s/setup/__init__.py -> build/bdist.linux-armv7l/wheel/hamstr1s/setup 2020-07-29T13:48:40,000 copying build/lib/hamstr1s/setup/setup_conda.sh -> build/bdist.linux-armv7l/wheel/hamstr1s/setup 2020-07-29T13:48:40,007 copying build/lib/hamstr1s/checkDataHamstr.py -> build/bdist.linux-armv7l/wheel/hamstr1s 2020-07-29T13:48:40,012 running install_egg_info 2020-07-29T13:48:40,054 running egg_info 2020-07-29T13:48:40,066 writing hamstr1s.egg-info/PKG-INFO 2020-07-29T13:48:40,071 writing dependency_links to hamstr1s.egg-info/dependency_links.txt 2020-07-29T13:48:40,075 writing entry points to hamstr1s.egg-info/entry_points.txt 2020-07-29T13:48:40,078 writing requirements to hamstr1s.egg-info/requires.txt 2020-07-29T13:48:40,080 writing top-level names to hamstr1s.egg-info/top_level.txt 2020-07-29T13:48:40,092 reading manifest file 'hamstr1s.egg-info/SOURCES.txt' 2020-07-29T13:48:40,097 reading manifest template 'MANIFEST.in' 2020-07-29T13:48:40,126 writing manifest file 'hamstr1s.egg-info/SOURCES.txt' 2020-07-29T13:48:40,130 Copying hamstr1s.egg-info to build/bdist.linux-armv7l/wheel/hamstr1s-2.0.1-py3.7.egg-info 2020-07-29T13:48:40,161 running install_scripts 2020-07-29T13:48:40,325 creating build/bdist.linux-armv7l/wheel/hamstr1s-2.0.1.dist-info/WHEEL 2020-07-29T13:48:40,331 creating '/tmp/pip-wheel-u2en4l_9/hamstr1s-2.0.1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2020-07-29T13:48:40,336 adding 'hamstr1s/__init__.py' 2020-07-29T13:48:40,339 adding 'hamstr1s/addTaxaHamstr.py' 2020-07-29T13:48:40,342 adding 'hamstr1s/addTaxonHamstr.py' 2020-07-29T13:48:40,346 adding 'hamstr1s/checkDataHamstr.py' 2020-07-29T13:48:40,348 adding 'hamstr1s/mergePhyloprofileData.py' 2020-07-29T13:48:40,353 adding 'hamstr1s/runOneseq.py' 2020-07-29T13:48:40,356 adding 'hamstr1s/setupOneseq.py' 2020-07-29T13:48:40,360 adding 'hamstr1s/bin/Filehandler.pm' 2020-07-29T13:48:40,362 adding 'hamstr1s/bin/__init__.py' 2020-07-29T13:48:40,382 adding 'hamstr1s/bin/hamstr.pl' 2020-07-29T13:48:40,404 adding 'hamstr1s/bin/oneSeq.pl' 2020-07-29T13:48:40,408 adding 'hamstr1s/bin/run_genewise_hamstr.pm' 2020-07-29T13:48:40,411 adding 'hamstr1s/bin/translate.pl' 2020-07-29T13:48:40,415 adding 'hamstr1s/data/__init__.py' 2020-07-29T13:48:40,417 adding 'hamstr1s/data/infile.fa' 2020-07-29T13:48:40,421 adding 'hamstr1s/setup/__init__.py' 2020-07-29T13:48:40,423 adding 'hamstr1s/setup/indexTaxonomy.pl' 2020-07-29T13:48:40,426 adding 'hamstr1s/setup/install_lib.sh' 2020-07-29T13:48:40,430 adding 'hamstr1s/setup/setup.sh' 2020-07-29T13:48:40,434 adding 'hamstr1s/setup/setup_conda.sh' 2020-07-29T13:48:40,439 adding 'hamstr1s-2.0.1.dist-info/METADATA' 2020-07-29T13:48:40,441 adding 'hamstr1s-2.0.1.dist-info/WHEEL' 2020-07-29T13:48:40,443 adding 'hamstr1s-2.0.1.dist-info/entry_points.txt' 2020-07-29T13:48:40,445 adding 'hamstr1s-2.0.1.dist-info/top_level.txt' 2020-07-29T13:48:40,446 adding 'hamstr1s-2.0.1.dist-info/RECORD' 2020-07-29T13:48:40,456 removing build/bdist.linux-armv7l/wheel 2020-07-29T13:48:40,614 Building wheel for hamstr1s (setup.py): finished with status 'done' 2020-07-29T13:48:40,620 Created wheel for hamstr1s: filename=hamstr1s-2.0.1-py3-none-any.whl size=87773 sha256=86c2ab293f9d01f27a1966034a19a1c21391dfdde9a613ac85d1152b534051af 2020-07-29T13:48:40,620 Stored in directory: /tmp/pip-ephem-wheel-cache-7rg9n7k0/wheels/54/fc/4c/aab21041ecdeea4a3d3b04cd3e3686d7e46e73caf86d41127e 2020-07-29T13:48:40,624 Successfully built hamstr1s 2020-07-29T13:48:40,645 Removed build tracker: '/tmp/pip-req-tracker-teeungmr'