2020-08-03T19:53:11,323 Created temporary directory: /tmp/pip-ephem-wheel-cache-igq548ub 2020-08-03T19:53:11,327 Created temporary directory: /tmp/pip-req-tracker-q9fc2le7 2020-08-03T19:53:11,328 Initialized build tracking at /tmp/pip-req-tracker-q9fc2le7 2020-08-03T19:53:11,329 Created build tracker: /tmp/pip-req-tracker-q9fc2le7 2020-08-03T19:53:11,329 Entered build tracker: /tmp/pip-req-tracker-q9fc2le7 2020-08-03T19:53:11,330 Created temporary directory: /tmp/pip-wheel-smv3c7ps 2020-08-03T19:53:11,350 1 location(s) to search for versions of metawibele: 2020-08-03T19:53:11,350 * https://pypi.org/simple/metawibele/ 2020-08-03T19:53:11,351 Fetching project page and analyzing links: https://pypi.org/simple/metawibele/ 2020-08-03T19:53:11,352 Getting page https://pypi.org/simple/metawibele/ 2020-08-03T19:53:11,355 Found index url https://pypi.org/simple 2020-08-03T19:53:11,557 Found link https://files.pythonhosted.org/packages/63/dd/f7fdaebfa37a66521ba36f5cba08d441ef0517891897cbaedd4dc65c23c5/metawibele-0.3.5.tar.gz#sha256=4b6c0bc3a001d849ec3fc5231b0a2af5dd718897b70f839e6435e6f1b6809c62 (from https://pypi.org/simple/metawibele/), version: 0.3.5 2020-08-03T19:53:11,557 Found link https://files.pythonhosted.org/packages/c8/13/b19f1456a883f66cbe84a9994809a7b474c95920e502ab105b350d4a0d76/metawibele-0.3.6.tar.gz#sha256=801791f1cb8c79b56b2c484829304330894de9814a805405ecf715cd7cd30763 (from https://pypi.org/simple/metawibele/), version: 0.3.6 2020-08-03T19:53:11,565 Given no hashes to check 1 links for project 'metawibele': discarding no candidates 2020-08-03T19:53:11,566 Using version 0.3.6 (newest of versions: 0.3.6) 2020-08-03T19:53:11,572 Collecting metawibele==0.3.6 2020-08-03T19:53:11,575 Created temporary directory: /tmp/pip-unpack-7jm_kx22 2020-08-03T19:53:11,652 Downloading metawibele-0.3.6.tar.gz (76.9 MB) 2020-08-03T19:53:39,922 Added metawibele==0.3.6 from https://files.pythonhosted.org/packages/c8/13/b19f1456a883f66cbe84a9994809a7b474c95920e502ab105b350d4a0d76/metawibele-0.3.6.tar.gz#sha256=801791f1cb8c79b56b2c484829304330894de9814a805405ecf715cd7cd30763 to build tracker '/tmp/pip-req-tracker-q9fc2le7' 2020-08-03T19:53:39,925 Running setup.py (path:/tmp/pip-wheel-smv3c7ps/metawibele/setup.py) egg_info for package metawibele 2020-08-03T19:53:39,927 Created temporary directory: /tmp/pip-pip-egg-info-stpi6sm5 2020-08-03T19:53:39,928 Running command python setup.py egg_info 2020-08-03T19:53:41,963 running egg_info 2020-08-03T19:53:41,968 creating /tmp/pip-pip-egg-info-stpi6sm5/metawibele.egg-info 2020-08-03T19:53:41,985 writing /tmp/pip-pip-egg-info-stpi6sm5/metawibele.egg-info/PKG-INFO 2020-08-03T19:53:41,991 writing dependency_links to /tmp/pip-pip-egg-info-stpi6sm5/metawibele.egg-info/dependency_links.txt 2020-08-03T19:53:42,000 writing entry points to /tmp/pip-pip-egg-info-stpi6sm5/metawibele.egg-info/entry_points.txt 2020-08-03T19:53:42,006 writing top-level names to /tmp/pip-pip-egg-info-stpi6sm5/metawibele.egg-info/top_level.txt 2020-08-03T19:53:42,011 writing manifest file '/tmp/pip-pip-egg-info-stpi6sm5/metawibele.egg-info/SOURCES.txt' 2020-08-03T19:53:42,336 reading manifest file '/tmp/pip-pip-egg-info-stpi6sm5/metawibele.egg-info/SOURCES.txt' 2020-08-03T19:53:42,339 reading manifest template 'MANIFEST.in' 2020-08-03T19:53:42,342 warning: no files found matching 'readme.md' 2020-08-03T19:53:42,366 writing manifest file '/tmp/pip-pip-egg-info-stpi6sm5/metawibele.egg-info/SOURCES.txt' 2020-08-03T19:53:42,496 Source in /tmp/pip-wheel-smv3c7ps/metawibele has version 0.3.6, which satisfies requirement metawibele==0.3.6 from https://files.pythonhosted.org/packages/c8/13/b19f1456a883f66cbe84a9994809a7b474c95920e502ab105b350d4a0d76/metawibele-0.3.6.tar.gz#sha256=801791f1cb8c79b56b2c484829304330894de9814a805405ecf715cd7cd30763 2020-08-03T19:53:42,497 Removed metawibele==0.3.6 from https://files.pythonhosted.org/packages/c8/13/b19f1456a883f66cbe84a9994809a7b474c95920e502ab105b350d4a0d76/metawibele-0.3.6.tar.gz#sha256=801791f1cb8c79b56b2c484829304330894de9814a805405ecf715cd7cd30763 from build tracker '/tmp/pip-req-tracker-q9fc2le7' 2020-08-03T19:53:42,501 Building wheels for collected packages: metawibele 2020-08-03T19:53:42,510 Created temporary directory: /tmp/pip-wheel-hrf7obkv 2020-08-03T19:53:42,511 Building wheel for metawibele (setup.py): started 2020-08-03T19:53:42,511 Destination directory: /tmp/pip-wheel-hrf7obkv 2020-08-03T19:53:42,511 Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-smv3c7ps/metawibele/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-smv3c7ps/metawibele/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-hrf7obkv 2020-08-03T19:53:44,463 running bdist_wheel 2020-08-03T19:53:44,472 running build 2020-08-03T19:53:44,473 running build_py 2020-08-03T19:53:44,742 creating build 2020-08-03T19:53:44,743 creating build/lib 2020-08-03T19:53:44,744 creating build/lib/metawibele 2020-08-03T19:53:44,747 copying metawibele/__init__.py -> build/lib/metawibele 2020-08-03T19:53:44,750 copying metawibele/utilities.py -> build/lib/metawibele 2020-08-03T19:53:44,757 copying metawibele/metawibele.py -> build/lib/metawibele 2020-08-03T19:53:44,762 copying metawibele/check.py -> build/lib/metawibele 2020-08-03T19:53:44,767 copying metawibele/config.py -> build/lib/metawibele 2020-08-03T19:53:44,779 creating build/lib/metawibele/tools 2020-08-03T19:53:44,781 copying metawibele/tools/__init__.py -> build/lib/metawibele/tools 2020-08-03T19:53:44,784 copying metawibele/tools/gene_abundance_indexRef.py -> build/lib/metawibele/tools 2020-08-03T19:53:44,789 copying metawibele/tools/preprocessing_tasks.py -> build/lib/metawibele/tools 2020-08-03T19:53:44,796 copying metawibele/tools/format_protein_sequences.py -> build/lib/metawibele/tools 2020-08-03T19:53:44,802 copying metawibele/tools/gene_catalog_abundance.py -> build/lib/metawibele/tools 2020-08-03T19:53:44,809 copying metawibele/tools/extract_non_redundance_seq.py -> build/lib/metawibele/tools 2020-08-03T19:53:44,815 copying metawibele/tools/extract_complete_ORF_seq.py -> build/lib/metawibele/tools 2020-08-03T19:53:44,821 copying metawibele/tools/extract_cluster_CD_hit.py -> build/lib/metawibele/tools 2020-08-03T19:53:44,828 copying metawibele/tools/combine_gene_sequences.py -> build/lib/metawibele/tools 2020-08-03T19:53:44,834 copying metawibele/tools/gene_abundance.py -> build/lib/metawibele/tools 2020-08-03T19:53:44,841 copying metawibele/tools/format_contig_sequences.py -> build/lib/metawibele/tools 2020-08-03T19:53:44,847 copying metawibele/tools/extract_protein_coding_genes.py -> build/lib/metawibele/tools 2020-08-03T19:53:44,855 creating build/lib/metawibele/prioritize 2020-08-03T19:53:44,857 copying metawibele/prioritize/__init__.py -> build/lib/metawibele/prioritize 2020-08-03T19:53:44,862 copying metawibele/prioritize/quantify_prioritization.py -> build/lib/metawibele/prioritize 2020-08-03T19:53:44,869 copying metawibele/prioritize/filter_prioritization.py -> build/lib/metawibele/prioritize 2020-08-03T19:53:44,876 copying metawibele/prioritize/finalize_prioritization.py -> build/lib/metawibele/prioritize 2020-08-03T19:53:44,885 creating build/lib/metawibele/common 2020-08-03T19:53:44,887 copying metawibele/common/abundance_RPK.py -> build/lib/metawibele/common 2020-08-03T19:53:44,892 copying metawibele/common/prepare_uniref_annotation.py -> build/lib/metawibele/common 2020-08-03T19:53:44,897 copying metawibele/common/abundance_filtering.py -> build/lib/metawibele/common 2020-08-03T19:53:44,902 copying metawibele/common/prepare_uniprot_taxonomy.py -> build/lib/metawibele/common 2020-08-03T19:53:44,906 copying metawibele/common/transpose.py -> build/lib/metawibele/common 2020-08-03T19:53:44,910 copying metawibele/common/__init__.py -> build/lib/metawibele/common 2020-08-03T19:53:44,914 copying metawibele/common/abundance_normalization.py -> build/lib/metawibele/common 2020-08-03T19:53:44,918 copying metawibele/common/abundance_smoothing.py -> build/lib/metawibele/common 2020-08-03T19:53:44,923 copying metawibele/common/extract_uniprot_pfam.py -> build/lib/metawibele/common 2020-08-03T19:53:44,930 copying metawibele/common/join_family_abundance.py -> build/lib/metawibele/common 2020-08-03T19:53:44,935 copying metawibele/common/split_family_abundance.py -> build/lib/metawibele/common 2020-08-03T19:53:44,940 copying metawibele/common/filter_prevalence.py -> build/lib/metawibele/common 2020-08-03T19:53:44,946 copying metawibele/common/extract_abundance_feature_subset.py -> build/lib/metawibele/common 2020-08-03T19:53:44,951 copying metawibele/common/utils.py -> build/lib/metawibele/common 2020-08-03T19:53:44,958 copying metawibele/common/filter_clusters.py -> build/lib/metawibele/common 2020-08-03T19:53:44,963 copying metawibele/common/prepare_domain_databases.py -> build/lib/metawibele/common 2020-08-03T19:53:44,969 copying metawibele/common/split_fasta_file.py -> build/lib/metawibele/common 2020-08-03T19:53:44,974 copying metawibele/common/download_config_file.py -> build/lib/metawibele/common 2020-08-03T19:53:44,980 copying metawibele/common/combine_abundance_annotation.py -> build/lib/metawibele/common 2020-08-03T19:53:44,986 copying metawibele/common/extract_abundance_sample_subset.py -> build/lib/metawibele/common 2020-08-03T19:53:44,992 copying metawibele/common/prepare_uniprot_annotation.py -> build/lib/metawibele/common 2020-08-03T19:53:45,007 creating build/lib/metawibele/characterize 2020-08-03T19:53:45,008 copying metawibele/characterize/interproscan_phobius_protein_family.py -> build/lib/metawibele/characterize 2020-08-03T19:53:45,014 copying metawibele/characterize/summary_protein_family_uniref_annotation.py -> build/lib/metawibele/characterize 2020-08-03T19:53:45,020 copying metawibele/characterize/sum_to_protein_family_abundance.py -> build/lib/metawibele/characterize 2020-08-03T19:53:45,025 copying metawibele/characterize/interproscan_signalp_protein_family.py -> build/lib/metawibele/characterize 2020-08-03T19:53:45,031 copying metawibele/characterize/__init__.py -> build/lib/metawibele/characterize 2020-08-03T19:53:45,035 copying metawibele/characterize/summary_function_annotation.py -> build/lib/metawibele/characterize 2020-08-03T19:53:45,042 copying metawibele/characterize/uniref_annotator.py -> build/lib/metawibele/characterize 2020-08-03T19:53:45,049 copying metawibele/characterize/summary_all_annotation.py -> build/lib/metawibele/characterize 2020-08-03T19:53:45,055 copying metawibele/characterize/mspminer_msp.py -> build/lib/metawibele/characterize 2020-08-03T19:53:45,061 copying metawibele/characterize/psortb_protein_family.py -> build/lib/metawibele/characterize 2020-08-03T19:53:45,068 copying metawibele/characterize/mspminer_protein_family.py -> build/lib/metawibele/characterize 2020-08-03T19:53:45,076 copying metawibele/characterize/utils.py -> build/lib/metawibele/characterize 2020-08-03T19:53:45,082 copying metawibele/characterize/denovo_TM_SP.py -> build/lib/metawibele/characterize 2020-08-03T19:53:45,088 copying metawibele/characterize/interproscan_tmhmm_protein_family.py -> build/lib/metawibele/characterize 2020-08-03T19:53:45,095 copying metawibele/characterize/uniref_protein_family.py -> build/lib/metawibele/characterize 2020-08-03T19:53:45,102 copying metawibele/characterize/ddi_DOMINE_protein.py -> build/lib/metawibele/characterize 2020-08-03T19:53:45,108 copying metawibele/characterize/psortb_protein.py -> build/lib/metawibele/characterize 2020-08-03T19:53:45,115 copying metawibele/characterize/maaslin2_annotator.py -> build/lib/metawibele/characterize 2020-08-03T19:53:45,121 copying metawibele/characterize/mspminer_protein_family_taxonomy.py -> build/lib/metawibele/characterize 2020-08-03T19:53:45,128 copying metawibele/characterize/psortb_annotator.py -> build/lib/metawibele/characterize 2020-08-03T19:53:45,133 copying metawibele/characterize/summary_protein_uniref_annotation.py -> build/lib/metawibele/characterize 2020-08-03T19:53:45,141 copying metawibele/characterize/maaslin2_summary.py -> build/lib/metawibele/characterize 2020-08-03T19:53:45,149 copying metawibele/characterize/interproscan_pfam_protein_family.py -> build/lib/metawibele/characterize 2020-08-03T19:53:45,155 copying metawibele/characterize/interproscan_protein.py -> build/lib/metawibele/characterize 2020-08-03T19:53:45,162 copying metawibele/characterize/pfam2go.py -> build/lib/metawibele/characterize 2020-08-03T19:53:45,168 copying metawibele/characterize/interproscan_protein_family.py -> build/lib/metawibele/characterize 2020-08-03T19:53:45,175 copying metawibele/characterize/finalize_annotation.py -> build/lib/metawibele/characterize 2020-08-03T19:53:45,183 copying metawibele/characterize/msp_protein_family.py -> build/lib/metawibele/characterize 2020-08-03T19:53:45,189 copying metawibele/characterize/mspminer_msp_taxonomy_annotation.py -> build/lib/metawibele/characterize 2020-08-03T19:53:45,196 copying metawibele/characterize/metadata_format.py -> build/lib/metawibele/characterize 2020-08-03T19:53:45,201 copying metawibele/characterize/uniref_protein.py -> build/lib/metawibele/characterize 2020-08-03T19:53:45,208 copying metawibele/characterize/mspminer_msp_uniref_annotation.py -> build/lib/metawibele/characterize 2020-08-03T19:53:45,215 copying metawibele/characterize/ddi_DOMINE_SIFTS.py -> build/lib/metawibele/characterize 2020-08-03T19:53:45,222 copying metawibele/characterize/abundance_annotator.py -> build/lib/metawibele/characterize 2020-08-03T19:53:45,228 copying metawibele/characterize/ddi_DOMINE_protein_family.py -> build/lib/metawibele/characterize 2020-08-03T19:53:45,234 copying metawibele/characterize/maaslin2_collection.py -> build/lib/metawibele/characterize 2020-08-03T19:53:45,240 copying metawibele/characterize/maaslin2.py -> build/lib/metawibele/characterize 2020-08-03T19:53:45,245 copying metawibele/characterize/mspminer_protein.py -> build/lib/metawibele/characterize 2020-08-03T19:53:45,250 copying metawibele/characterize/uniref_annotator_stat.py -> build/lib/metawibele/characterize 2020-08-03T19:53:45,255 copying metawibele/characterize/ddi_DOMINE_ann.py -> build/lib/metawibele/characterize 2020-08-03T19:53:45,260 copying metawibele/characterize/ddi_DOMINE_ExpAtlas.py -> build/lib/metawibele/characterize 2020-08-03T19:53:45,265 copying metawibele/characterize/interproscan_annotator.py -> build/lib/metawibele/characterize 2020-08-03T19:53:45,270 creating build/lib/metawibele/tasks 2020-08-03T19:53:45,272 copying metawibele/tasks/__init__.py -> build/lib/metawibele/tasks 2020-08-03T19:53:45,276 copying metawibele/tasks/prioritization.py -> build/lib/metawibele/tasks 2020-08-03T19:53:45,281 copying metawibele/tasks/characterization.py -> build/lib/metawibele/tasks 2020-08-03T19:53:45,302 creating build/lib/metawibele/workflows 2020-08-03T19:53:45,304 copying metawibele/workflows/prioritize.py -> build/lib/metawibele/workflows 2020-08-03T19:53:45,311 copying metawibele/workflows/characterize.py -> build/lib/metawibele/workflows 2020-08-03T19:53:45,317 copying metawibele/workflows/preprocess.py -> build/lib/metawibele/workflows 2020-08-03T19:53:45,323 creating build/lib/metawibele/configs 2020-08-03T19:53:45,325 copying metawibele/configs/characterization.cfg -> build/lib/metawibele/configs 2020-08-03T19:53:45,332 copying metawibele/configs/metawibele.cfg -> build/lib/metawibele/configs 2020-08-03T19:53:45,340 copying metawibele/configs/prioritization.cfg -> build/lib/metawibele/configs 2020-08-03T19:53:45,347 copying metawibele/configs/MSPminer_setting.cfg -> build/lib/metawibele/configs 2020-08-03T19:53:45,353 creating build/lib/metawibele/data 2020-08-03T19:53:45,354 creating build/lib/metawibele/data/domain 2020-08-03T19:53:45,358 copying metawibele/data/domain/Encode_sigmoid_colon.txt.gz -> build/lib/metawibele/data/domain 2020-08-03T19:53:45,377 copying metawibele/data/domain/FANTOM5_colon_rectum.txt.gz -> build/lib/metawibele/data/domain 2020-08-03T19:53:45,399 copying metawibele/data/domain/Human_protein_Atlas_colon_rectum.txt.gz -> build/lib/metawibele/data/domain 2020-08-03T19:53:45,409 copying metawibele/data/domain/README.txt -> build/lib/metawibele/data/domain 2020-08-03T19:53:45,415 copying metawibele/data/domain/INTERACTION.txt.gz -> build/lib/metawibele/data/domain 2020-08-03T19:53:45,435 copying metawibele/data/domain/Human_proteome_map_colon_rectum.txt.gz -> build/lib/metawibele/data/domain 2020-08-03T19:53:45,451 copying metawibele/data/domain/gene_ontology.txt.gz -> build/lib/metawibele/data/domain 2020-08-03T19:53:45,468 copying metawibele/data/domain/Illumina_Body_Map_colon.txt.gz -> build/lib/metawibele/data/domain 2020-08-03T19:53:45,488 copying metawibele/data/domain/pfam_descriptions.txt.gz -> build/lib/metawibele/data/domain 2020-08-03T19:53:45,516 copying metawibele/data/domain/pdb_chain_pfam.tsv.gz -> build/lib/metawibele/data/domain 2020-08-03T19:53:45,732 copying metawibele/data/domain/32_Uhlen_Lab_colon_rectum.txt.gz -> build/lib/metawibele/data/domain 2020-08-03T19:53:45,757 copying metawibele/data/domain/GTEx_sigmoid_transverse_colon.txt.gz -> build/lib/metawibele/data/domain 2020-08-03T19:53:45,783 copying metawibele/data/domain/pdb_chain_taxonomy.tsv.gz -> build/lib/metawibele/data/domain 2020-08-03T19:53:48,330 creating build/lib/metawibele/data/uniref 2020-08-03T19:53:48,332 copying metawibele/data/uniref/uniprot_taxaID_mammalia.txt.gz -> build/lib/metawibele/data/uniref 2020-08-03T19:53:48,341 copying metawibele/data/uniref/uniprot_taxaID_microbiome.txt.gz -> build/lib/metawibele/data/uniref 2020-08-03T19:53:48,529 copying metawibele/data/uniref/README.txt -> build/lib/metawibele/data/uniref 2020-08-03T19:53:48,536 copying metawibele/data/uniref/uniprot_human_pfam.tsv.gz -> build/lib/metawibele/data/uniref 2020-08-03T19:53:48,753 copying metawibele/data/uniref/uniprot_taxonomy.tsv.gz -> build/lib/metawibele/data/uniref 2020-08-03T19:53:52,869 creating build/lib/metawibele/data/misc 2020-08-03T19:53:52,872 copying metawibele/data/misc/vignette_function.tsv -> build/lib/metawibele/data/misc 2020-08-03T19:53:52,879 creating build/lib/metawibele/Rscripts 2020-08-03T19:53:52,882 copying metawibele/Rscripts/maaslin2_utils.R -> build/lib/metawibele/Rscripts 2020-08-03T19:53:52,889 copying metawibele/Rscripts/pcl_utils.R -> build/lib/metawibele/Rscripts 2020-08-03T19:53:52,922 running build_scripts 2020-08-03T19:53:52,924 creating build/scripts-3.7 2020-08-03T19:53:52,927 copying and adjusting metawibele/workflows/prioritize.py -> build/scripts-3.7 2020-08-03T19:53:52,933 copying and adjusting metawibele/workflows/characterize.py -> build/scripts-3.7 2020-08-03T19:53:52,940 copying and adjusting metawibele/workflows/preprocess.py -> build/scripts-3.7 2020-08-03T19:53:52,944 changing mode of build/scripts-3.7/prioritize.py from 644 to 755 2020-08-03T19:53:52,945 changing mode of build/scripts-3.7/characterize.py from 644 to 755 2020-08-03T19:53:52,947 changing mode of build/scripts-3.7/preprocess.py from 644 to 755 2020-08-03T19:53:52,950 installing to build/bdist.linux-armv7l/wheel 2020-08-03T19:53:52,950 running install 2020-08-03T19:53:52,953 running install_lib 2020-08-03T19:53:52,961 creating build/bdist.linux-armv7l 2020-08-03T19:53:52,963 creating build/bdist.linux-armv7l/wheel 2020-08-03T19:53:52,967 creating build/bdist.linux-armv7l/wheel/metawibele 2020-08-03T19:53:52,971 creating build/bdist.linux-armv7l/wheel/metawibele/tools 2020-08-03T19:53:52,974 copying build/lib/metawibele/tools/__init__.py -> build/bdist.linux-armv7l/wheel/metawibele/tools 2020-08-03T19:53:52,979 copying build/lib/metawibele/tools/gene_abundance_indexRef.py -> build/bdist.linux-armv7l/wheel/metawibele/tools 2020-08-03T19:53:52,984 copying build/lib/metawibele/tools/preprocessing_tasks.py -> build/bdist.linux-armv7l/wheel/metawibele/tools 2020-08-03T19:53:52,991 copying build/lib/metawibele/tools/format_protein_sequences.py -> build/bdist.linux-armv7l/wheel/metawibele/tools 2020-08-03T19:53:52,998 copying build/lib/metawibele/tools/gene_catalog_abundance.py -> build/bdist.linux-armv7l/wheel/metawibele/tools 2020-08-03T19:53:53,005 copying build/lib/metawibele/tools/extract_non_redundance_seq.py -> build/bdist.linux-armv7l/wheel/metawibele/tools 2020-08-03T19:53:53,012 copying build/lib/metawibele/tools/extract_complete_ORF_seq.py -> build/bdist.linux-armv7l/wheel/metawibele/tools 2020-08-03T19:53:53,018 copying build/lib/metawibele/tools/extract_cluster_CD_hit.py -> build/bdist.linux-armv7l/wheel/metawibele/tools 2020-08-03T19:53:53,025 copying build/lib/metawibele/tools/combine_gene_sequences.py -> build/bdist.linux-armv7l/wheel/metawibele/tools 2020-08-03T19:53:53,032 copying build/lib/metawibele/tools/gene_abundance.py -> build/bdist.linux-armv7l/wheel/metawibele/tools 2020-08-03T19:53:53,038 copying build/lib/metawibele/tools/format_contig_sequences.py -> build/bdist.linux-armv7l/wheel/metawibele/tools 2020-08-03T19:53:53,042 copying build/lib/metawibele/tools/extract_protein_coding_genes.py -> build/bdist.linux-armv7l/wheel/metawibele/tools 2020-08-03T19:53:53,047 copying build/lib/metawibele/__init__.py -> build/bdist.linux-armv7l/wheel/metawibele 2020-08-03T19:53:53,050 copying build/lib/metawibele/utilities.py -> build/bdist.linux-armv7l/wheel/metawibele 2020-08-03T19:53:53,059 creating build/bdist.linux-armv7l/wheel/metawibele/Rscripts 2020-08-03T19:53:53,061 copying build/lib/metawibele/Rscripts/maaslin2_utils.R -> build/bdist.linux-armv7l/wheel/metawibele/Rscripts 2020-08-03T19:53:53,067 copying build/lib/metawibele/Rscripts/pcl_utils.R -> build/bdist.linux-armv7l/wheel/metawibele/Rscripts 2020-08-03T19:53:53,078 creating build/bdist.linux-armv7l/wheel/metawibele/data 2020-08-03T19:53:53,082 creating build/bdist.linux-armv7l/wheel/metawibele/data/domain 2020-08-03T19:53:53,084 copying build/lib/metawibele/data/domain/Encode_sigmoid_colon.txt.gz -> build/bdist.linux-armv7l/wheel/metawibele/data/domain 2020-08-03T19:53:53,102 copying build/lib/metawibele/data/domain/FANTOM5_colon_rectum.txt.gz -> build/bdist.linux-armv7l/wheel/metawibele/data/domain 2020-08-03T19:53:53,120 copying build/lib/metawibele/data/domain/Human_protein_Atlas_colon_rectum.txt.gz -> build/bdist.linux-armv7l/wheel/metawibele/data/domain 2020-08-03T19:53:53,128 copying build/lib/metawibele/data/domain/README.txt -> build/bdist.linux-armv7l/wheel/metawibele/data/domain 2020-08-03T19:53:53,132 copying build/lib/metawibele/data/domain/INTERACTION.txt.gz -> build/bdist.linux-armv7l/wheel/metawibele/data/domain 2020-08-03T19:53:53,149 copying build/lib/metawibele/data/domain/Human_proteome_map_colon_rectum.txt.gz -> build/bdist.linux-armv7l/wheel/metawibele/data/domain 2020-08-03T19:53:53,163 copying build/lib/metawibele/data/domain/gene_ontology.txt.gz -> build/bdist.linux-armv7l/wheel/metawibele/data/domain 2020-08-03T19:53:53,179 copying build/lib/metawibele/data/domain/Illumina_Body_Map_colon.txt.gz -> build/bdist.linux-armv7l/wheel/metawibele/data/domain 2020-08-03T19:53:53,196 copying build/lib/metawibele/data/domain/pfam_descriptions.txt.gz -> build/bdist.linux-armv7l/wheel/metawibele/data/domain 2020-08-03T19:53:53,221 copying build/lib/metawibele/data/domain/pdb_chain_pfam.tsv.gz -> build/bdist.linux-armv7l/wheel/metawibele/data/domain 2020-08-03T19:53:53,443 copying build/lib/metawibele/data/domain/32_Uhlen_Lab_colon_rectum.txt.gz -> build/bdist.linux-armv7l/wheel/metawibele/data/domain 2020-08-03T19:53:53,466 copying build/lib/metawibele/data/domain/GTEx_sigmoid_transverse_colon.txt.gz -> build/bdist.linux-armv7l/wheel/metawibele/data/domain 2020-08-03T19:53:53,489 copying build/lib/metawibele/data/domain/pdb_chain_taxonomy.tsv.gz -> build/bdist.linux-armv7l/wheel/metawibele/data/domain 2020-08-03T19:53:56,058 creating build/bdist.linux-armv7l/wheel/metawibele/data/misc 2020-08-03T19:53:56,061 copying build/lib/metawibele/data/misc/vignette_function.tsv -> build/bdist.linux-armv7l/wheel/metawibele/data/misc 2020-08-03T19:53:56,069 creating build/bdist.linux-armv7l/wheel/metawibele/data/uniref 2020-08-03T19:53:56,073 copying build/lib/metawibele/data/uniref/uniprot_taxaID_mammalia.txt.gz -> build/bdist.linux-armv7l/wheel/metawibele/data/uniref 2020-08-03T19:53:56,083 copying build/lib/metawibele/data/uniref/uniprot_taxaID_microbiome.txt.gz -> build/bdist.linux-armv7l/wheel/metawibele/data/uniref 2020-08-03T19:53:56,270 copying build/lib/metawibele/data/uniref/README.txt -> build/bdist.linux-armv7l/wheel/metawibele/data/uniref 2020-08-03T19:53:56,277 copying build/lib/metawibele/data/uniref/uniprot_human_pfam.tsv.gz -> build/bdist.linux-armv7l/wheel/metawibele/data/uniref 2020-08-03T19:53:56,494 copying build/lib/metawibele/data/uniref/uniprot_taxonomy.tsv.gz -> build/bdist.linux-armv7l/wheel/metawibele/data/uniref 2020-08-03T19:54:00,582 copying build/lib/metawibele/metawibele.py -> build/bdist.linux-armv7l/wheel/metawibele 2020-08-03T19:54:00,589 creating build/bdist.linux-armv7l/wheel/metawibele/prioritize 2020-08-03T19:54:00,591 copying build/lib/metawibele/prioritize/__init__.py -> build/bdist.linux-armv7l/wheel/metawibele/prioritize 2020-08-03T19:54:00,596 copying build/lib/metawibele/prioritize/quantify_prioritization.py -> build/bdist.linux-armv7l/wheel/metawibele/prioritize 2020-08-03T19:54:00,603 copying build/lib/metawibele/prioritize/filter_prioritization.py -> build/bdist.linux-armv7l/wheel/metawibele/prioritize 2020-08-03T19:54:00,609 copying build/lib/metawibele/prioritize/finalize_prioritization.py -> build/bdist.linux-armv7l/wheel/metawibele/prioritize 2020-08-03T19:54:00,617 creating build/bdist.linux-armv7l/wheel/metawibele/common 2020-08-03T19:54:00,619 copying build/lib/metawibele/common/abundance_RPK.py -> build/bdist.linux-armv7l/wheel/metawibele/common 2020-08-03T19:54:00,625 copying build/lib/metawibele/common/prepare_uniref_annotation.py -> build/bdist.linux-armv7l/wheel/metawibele/common 2020-08-03T19:54:00,633 copying build/lib/metawibele/common/abundance_filtering.py -> build/bdist.linux-armv7l/wheel/metawibele/common 2020-08-03T19:54:00,640 copying build/lib/metawibele/common/prepare_uniprot_taxonomy.py -> build/bdist.linux-armv7l/wheel/metawibele/common 2020-08-03T19:54:00,657 copying build/lib/metawibele/common/transpose.py -> build/bdist.linux-armv7l/wheel/metawibele/common 2020-08-03T19:54:00,661 copying build/lib/metawibele/common/__init__.py -> build/bdist.linux-armv7l/wheel/metawibele/common 2020-08-03T19:54:00,665 copying build/lib/metawibele/common/abundance_normalization.py -> build/bdist.linux-armv7l/wheel/metawibele/common 2020-08-03T19:54:00,670 copying build/lib/metawibele/common/abundance_smoothing.py -> build/bdist.linux-armv7l/wheel/metawibele/common 2020-08-03T19:54:00,675 copying build/lib/metawibele/common/extract_uniprot_pfam.py -> build/bdist.linux-armv7l/wheel/metawibele/common 2020-08-03T19:54:00,680 copying build/lib/metawibele/common/join_family_abundance.py -> build/bdist.linux-armv7l/wheel/metawibele/common 2020-08-03T19:54:00,684 copying build/lib/metawibele/common/split_family_abundance.py -> build/bdist.linux-armv7l/wheel/metawibele/common 2020-08-03T19:54:00,689 copying build/lib/metawibele/common/filter_prevalence.py -> build/bdist.linux-armv7l/wheel/metawibele/common 2020-08-03T19:54:00,694 copying build/lib/metawibele/common/extract_abundance_feature_subset.py -> build/bdist.linux-armv7l/wheel/metawibele/common 2020-08-03T19:54:00,698 copying build/lib/metawibele/common/utils.py -> build/bdist.linux-armv7l/wheel/metawibele/common 2020-08-03T19:54:00,704 copying build/lib/metawibele/common/filter_clusters.py -> build/bdist.linux-armv7l/wheel/metawibele/common 2020-08-03T19:54:00,708 copying build/lib/metawibele/common/prepare_domain_databases.py -> build/bdist.linux-armv7l/wheel/metawibele/common 2020-08-03T19:54:00,713 copying build/lib/metawibele/common/split_fasta_file.py -> build/bdist.linux-armv7l/wheel/metawibele/common 2020-08-03T19:54:00,718 copying build/lib/metawibele/common/download_config_file.py -> build/bdist.linux-armv7l/wheel/metawibele/common 2020-08-03T19:54:00,724 copying build/lib/metawibele/common/combine_abundance_annotation.py -> build/bdist.linux-armv7l/wheel/metawibele/common 2020-08-03T19:54:00,731 copying build/lib/metawibele/common/extract_abundance_sample_subset.py -> build/bdist.linux-armv7l/wheel/metawibele/common 2020-08-03T19:54:00,737 copying build/lib/metawibele/common/prepare_uniprot_annotation.py -> build/bdist.linux-armv7l/wheel/metawibele/common 2020-08-03T19:54:00,746 creating build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-08-03T19:54:00,747 copying build/lib/metawibele/characterize/interproscan_phobius_protein_family.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-08-03T19:54:00,753 copying build/lib/metawibele/characterize/summary_protein_family_uniref_annotation.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-08-03T19:54:00,760 copying build/lib/metawibele/characterize/sum_to_protein_family_abundance.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-08-03T19:54:00,765 copying build/lib/metawibele/characterize/interproscan_signalp_protein_family.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-08-03T19:54:00,771 copying build/lib/metawibele/characterize/__init__.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-08-03T19:54:00,775 copying build/lib/metawibele/characterize/summary_function_annotation.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-08-03T19:54:00,781 copying build/lib/metawibele/characterize/uniref_annotator.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-08-03T19:54:00,788 copying build/lib/metawibele/characterize/summary_all_annotation.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-08-03T19:54:00,794 copying build/lib/metawibele/characterize/mspminer_msp.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-08-03T19:54:00,801 copying build/lib/metawibele/characterize/psortb_protein_family.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-08-03T19:54:00,808 copying build/lib/metawibele/characterize/mspminer_protein_family.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-08-03T19:54:00,816 copying build/lib/metawibele/characterize/utils.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-08-03T19:54:00,822 copying build/lib/metawibele/characterize/denovo_TM_SP.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-08-03T19:54:00,829 copying build/lib/metawibele/characterize/interproscan_tmhmm_protein_family.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-08-03T19:54:00,836 copying build/lib/metawibele/characterize/uniref_protein_family.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-08-03T19:54:00,844 copying build/lib/metawibele/characterize/ddi_DOMINE_protein.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-08-03T19:54:00,850 copying build/lib/metawibele/characterize/psortb_protein.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-08-03T19:54:00,857 copying build/lib/metawibele/characterize/maaslin2_annotator.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-08-03T19:54:00,863 copying build/lib/metawibele/characterize/mspminer_protein_family_taxonomy.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-08-03T19:54:00,871 copying build/lib/metawibele/characterize/psortb_annotator.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-08-03T19:54:00,877 copying build/lib/metawibele/characterize/summary_protein_uniref_annotation.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-08-03T19:54:00,884 copying build/lib/metawibele/characterize/maaslin2_summary.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-08-03T19:54:00,892 copying build/lib/metawibele/characterize/interproscan_pfam_protein_family.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-08-03T19:54:00,899 copying build/lib/metawibele/characterize/interproscan_protein.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-08-03T19:54:00,906 copying build/lib/metawibele/characterize/pfam2go.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-08-03T19:54:00,912 copying build/lib/metawibele/characterize/interproscan_protein_family.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-08-03T19:54:00,919 copying build/lib/metawibele/characterize/finalize_annotation.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-08-03T19:54:00,926 copying build/lib/metawibele/characterize/msp_protein_family.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-08-03T19:54:00,933 copying build/lib/metawibele/characterize/mspminer_msp_taxonomy_annotation.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-08-03T19:54:00,940 copying build/lib/metawibele/characterize/metadata_format.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-08-03T19:54:00,946 copying build/lib/metawibele/characterize/uniref_protein.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-08-03T19:54:00,952 copying build/lib/metawibele/characterize/mspminer_msp_uniref_annotation.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-08-03T19:54:00,959 copying build/lib/metawibele/characterize/ddi_DOMINE_SIFTS.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-08-03T19:54:00,966 copying build/lib/metawibele/characterize/abundance_annotator.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-08-03T19:54:00,973 copying build/lib/metawibele/characterize/ddi_DOMINE_protein_family.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-08-03T19:54:00,980 copying build/lib/metawibele/characterize/maaslin2_collection.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-08-03T19:54:00,988 copying build/lib/metawibele/characterize/maaslin2.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-08-03T19:54:00,995 copying build/lib/metawibele/characterize/mspminer_protein.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-08-03T19:54:01,002 copying build/lib/metawibele/characterize/uniref_annotator_stat.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-08-03T19:54:01,008 copying build/lib/metawibele/characterize/ddi_DOMINE_ann.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-08-03T19:54:01,015 copying build/lib/metawibele/characterize/ddi_DOMINE_ExpAtlas.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-08-03T19:54:01,022 copying build/lib/metawibele/characterize/interproscan_annotator.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-08-03T19:54:01,029 creating build/bdist.linux-armv7l/wheel/metawibele/configs 2020-08-03T19:54:01,031 copying build/lib/metawibele/configs/characterization.cfg -> build/bdist.linux-armv7l/wheel/metawibele/configs 2020-08-03T19:54:01,037 copying build/lib/metawibele/configs/metawibele.cfg -> build/bdist.linux-armv7l/wheel/metawibele/configs 2020-08-03T19:54:01,044 copying build/lib/metawibele/configs/prioritization.cfg -> build/bdist.linux-armv7l/wheel/metawibele/configs 2020-08-03T19:54:01,049 copying build/lib/metawibele/configs/MSPminer_setting.cfg -> build/bdist.linux-armv7l/wheel/metawibele/configs 2020-08-03T19:54:01,056 creating build/bdist.linux-armv7l/wheel/metawibele/tasks 2020-08-03T19:54:01,059 copying build/lib/metawibele/tasks/__init__.py -> build/bdist.linux-armv7l/wheel/metawibele/tasks 2020-08-03T19:54:01,064 copying build/lib/metawibele/tasks/prioritization.py -> build/bdist.linux-armv7l/wheel/metawibele/tasks 2020-08-03T19:54:01,070 copying build/lib/metawibele/tasks/characterization.py -> build/bdist.linux-armv7l/wheel/metawibele/tasks 2020-08-03T19:54:01,083 copying build/lib/metawibele/check.py -> build/bdist.linux-armv7l/wheel/metawibele 2020-08-03T19:54:01,091 creating build/bdist.linux-armv7l/wheel/metawibele/workflows 2020-08-03T19:54:01,093 copying build/lib/metawibele/workflows/prioritize.py -> build/bdist.linux-armv7l/wheel/metawibele/workflows 2020-08-03T19:54:01,100 copying build/lib/metawibele/workflows/characterize.py -> build/bdist.linux-armv7l/wheel/metawibele/workflows 2020-08-03T19:54:01,107 copying build/lib/metawibele/workflows/preprocess.py -> build/bdist.linux-armv7l/wheel/metawibele/workflows 2020-08-03T19:54:01,114 copying build/lib/metawibele/config.py -> build/bdist.linux-armv7l/wheel/metawibele 2020-08-03T19:54:01,121 running install_egg_info 2020-08-03T19:54:01,164 running egg_info 2020-08-03T19:54:01,178 writing metawibele.egg-info/PKG-INFO 2020-08-03T19:54:01,182 writing dependency_links to metawibele.egg-info/dependency_links.txt 2020-08-03T19:54:01,190 writing entry points to metawibele.egg-info/entry_points.txt 2020-08-03T19:54:01,194 writing top-level names to metawibele.egg-info/top_level.txt 2020-08-03T19:54:01,266 reading manifest file 'metawibele.egg-info/SOURCES.txt' 2020-08-03T19:54:01,281 reading manifest template 'MANIFEST.in' 2020-08-03T19:54:01,282 warning: no files found matching 'readme.md' 2020-08-03T19:54:01,310 writing manifest file 'metawibele.egg-info/SOURCES.txt' 2020-08-03T19:54:01,314 Copying metawibele.egg-info to build/bdist.linux-armv7l/wheel/metawibele-0.3.6-py3.7.egg-info 2020-08-03T19:54:01,349 running install_scripts 2020-08-03T19:54:01,399 creating build/bdist.linux-armv7l/wheel/metawibele-0.3.6.data 2020-08-03T19:54:01,399 creating build/bdist.linux-armv7l/wheel/metawibele-0.3.6.data/scripts 2020-08-03T19:54:01,402 copying build/scripts-3.7/prioritize.py -> build/bdist.linux-armv7l/wheel/metawibele-0.3.6.data/scripts 2020-08-03T19:54:01,407 copying build/scripts-3.7/characterize.py -> build/bdist.linux-armv7l/wheel/metawibele-0.3.6.data/scripts 2020-08-03T19:54:01,413 copying build/scripts-3.7/preprocess.py -> build/bdist.linux-armv7l/wheel/metawibele-0.3.6.data/scripts 2020-08-03T19:54:01,418 changing mode of build/bdist.linux-armv7l/wheel/metawibele-0.3.6.data/scripts/prioritize.py to 755 2020-08-03T19:54:01,418 changing mode of build/bdist.linux-armv7l/wheel/metawibele-0.3.6.data/scripts/characterize.py to 755 2020-08-03T19:54:01,419 changing mode of build/bdist.linux-armv7l/wheel/metawibele-0.3.6.data/scripts/preprocess.py to 755 2020-08-03T19:54:01,466 adding license file "LICENSE" (matched pattern "LICEN[CS]E*") 2020-08-03T19:54:01,478 creating build/bdist.linux-armv7l/wheel/metawibele-0.3.6.dist-info/WHEEL 2020-08-03T19:54:01,483 creating '/tmp/pip-wheel-hrf7obkv/metawibele-0.3.6-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2020-08-03T19:54:01,489 adding 'metawibele/__init__.py' 2020-08-03T19:54:01,493 adding 'metawibele/check.py' 2020-08-03T19:54:01,502 adding 'metawibele/config.py' 2020-08-03T19:54:01,506 adding 'metawibele/metawibele.py' 2020-08-03T19:54:01,514 adding 'metawibele/utilities.py' 2020-08-03T19:54:01,518 adding 'metawibele/Rscripts/maaslin2_utils.R' 2020-08-03T19:54:01,529 adding 'metawibele/Rscripts/pcl_utils.R' 2020-08-03T19:54:01,535 adding 'metawibele/characterize/__init__.py' 2020-08-03T19:54:01,538 adding 'metawibele/characterize/abundance_annotator.py' 2020-08-03T19:54:01,542 adding 'metawibele/characterize/ddi_DOMINE_ExpAtlas.py' 2020-08-03T19:54:01,546 adding 'metawibele/characterize/ddi_DOMINE_SIFTS.py' 2020-08-03T19:54:01,549 adding 'metawibele/characterize/ddi_DOMINE_ann.py' 2020-08-03T19:54:01,552 adding 'metawibele/characterize/ddi_DOMINE_protein.py' 2020-08-03T19:54:01,557 adding 'metawibele/characterize/ddi_DOMINE_protein_family.py' 2020-08-03T19:54:01,560 adding 'metawibele/characterize/denovo_TM_SP.py' 2020-08-03T19:54:01,564 adding 'metawibele/characterize/finalize_annotation.py' 2020-08-03T19:54:01,567 adding 'metawibele/characterize/interproscan_annotator.py' 2020-08-03T19:54:01,571 adding 'metawibele/characterize/interproscan_pfam_protein_family.py' 2020-08-03T19:54:01,575 adding 'metawibele/characterize/interproscan_phobius_protein_family.py' 2020-08-03T19:54:01,578 adding 'metawibele/characterize/interproscan_protein.py' 2020-08-03T19:54:01,584 adding 'metawibele/characterize/interproscan_protein_family.py' 2020-08-03T19:54:01,587 adding 'metawibele/characterize/interproscan_signalp_protein_family.py' 2020-08-03T19:54:01,591 adding 'metawibele/characterize/interproscan_tmhmm_protein_family.py' 2020-08-03T19:54:01,594 adding 'metawibele/characterize/maaslin2.py' 2020-08-03T19:54:01,597 adding 'metawibele/characterize/maaslin2_annotator.py' 2020-08-03T19:54:01,602 adding 'metawibele/characterize/maaslin2_collection.py' 2020-08-03T19:54:01,607 adding 'metawibele/characterize/maaslin2_summary.py' 2020-08-03T19:54:01,610 adding 'metawibele/characterize/metadata_format.py' 2020-08-03T19:54:01,613 adding 'metawibele/characterize/msp_protein_family.py' 2020-08-03T19:54:01,616 adding 'metawibele/characterize/mspminer_msp.py' 2020-08-03T19:54:01,620 adding 'metawibele/characterize/mspminer_msp_taxonomy_annotation.py' 2020-08-03T19:54:01,623 adding 'metawibele/characterize/mspminer_msp_uniref_annotation.py' 2020-08-03T19:54:01,626 adding 'metawibele/characterize/mspminer_protein.py' 2020-08-03T19:54:01,631 adding 'metawibele/characterize/mspminer_protein_family.py' 2020-08-03T19:54:01,635 adding 'metawibele/characterize/mspminer_protein_family_taxonomy.py' 2020-08-03T19:54:01,639 adding 'metawibele/characterize/pfam2go.py' 2020-08-03T19:54:01,641 adding 'metawibele/characterize/psortb_annotator.py' 2020-08-03T19:54:01,644 adding 'metawibele/characterize/psortb_protein.py' 2020-08-03T19:54:01,648 adding 'metawibele/characterize/psortb_protein_family.py' 2020-08-03T19:54:01,652 adding 'metawibele/characterize/sum_to_protein_family_abundance.py' 2020-08-03T19:54:01,655 adding 'metawibele/characterize/summary_all_annotation.py' 2020-08-03T19:54:01,659 adding 'metawibele/characterize/summary_function_annotation.py' 2020-08-03T19:54:01,663 adding 'metawibele/characterize/summary_protein_family_uniref_annotation.py' 2020-08-03T19:54:01,668 adding 'metawibele/characterize/summary_protein_uniref_annotation.py' 2020-08-03T19:54:01,672 adding 'metawibele/characterize/uniref_annotator.py' 2020-08-03T19:54:01,675 adding 'metawibele/characterize/uniref_annotator_stat.py' 2020-08-03T19:54:01,679 adding 'metawibele/characterize/uniref_protein.py' 2020-08-03T19:54:01,683 adding 'metawibele/characterize/uniref_protein_family.py' 2020-08-03T19:54:01,687 adding 'metawibele/characterize/utils.py' 2020-08-03T19:54:01,691 adding 'metawibele/common/__init__.py' 2020-08-03T19:54:01,694 adding 'metawibele/common/abundance_RPK.py' 2020-08-03T19:54:01,697 adding 'metawibele/common/abundance_filtering.py' 2020-08-03T19:54:01,700 adding 'metawibele/common/abundance_normalization.py' 2020-08-03T19:54:01,703 adding 'metawibele/common/abundance_smoothing.py' 2020-08-03T19:54:01,706 adding 'metawibele/common/combine_abundance_annotation.py' 2020-08-03T19:54:01,709 adding 'metawibele/common/download_config_file.py' 2020-08-03T19:54:01,712 adding 'metawibele/common/extract_abundance_feature_subset.py' 2020-08-03T19:54:01,714 adding 'metawibele/common/extract_abundance_sample_subset.py' 2020-08-03T19:54:01,717 adding 'metawibele/common/extract_uniprot_pfam.py' 2020-08-03T19:54:01,720 adding 'metawibele/common/filter_clusters.py' 2020-08-03T19:54:01,723 adding 'metawibele/common/filter_prevalence.py' 2020-08-03T19:54:01,725 adding 'metawibele/common/join_family_abundance.py' 2020-08-03T19:54:01,728 adding 'metawibele/common/prepare_domain_databases.py' 2020-08-03T19:54:01,732 adding 'metawibele/common/prepare_uniprot_annotation.py' 2020-08-03T19:54:01,735 adding 'metawibele/common/prepare_uniprot_taxonomy.py' 2020-08-03T19:54:01,739 adding 'metawibele/common/prepare_uniref_annotation.py' 2020-08-03T19:54:01,742 adding 'metawibele/common/split_family_abundance.py' 2020-08-03T19:54:01,746 adding 'metawibele/common/split_fasta_file.py' 2020-08-03T19:54:01,748 adding 'metawibele/common/transpose.py' 2020-08-03T19:54:01,752 adding 'metawibele/common/utils.py' 2020-08-03T19:54:01,756 adding 'metawibele/configs/MSPminer_setting.cfg' 2020-08-03T19:54:01,759 adding 'metawibele/configs/characterization.cfg' 2020-08-03T19:54:01,762 adding 'metawibele/configs/metawibele.cfg' 2020-08-03T19:54:01,765 adding 'metawibele/configs/prioritization.cfg' 2020-08-03T19:54:01,805 adding 'metawibele/data/domain/32_Uhlen_Lab_colon_rectum.txt.gz' 2020-08-03T19:54:01,833 adding 'metawibele/data/domain/Encode_sigmoid_colon.txt.gz' 2020-08-03T19:54:01,863 adding 'metawibele/data/domain/FANTOM5_colon_rectum.txt.gz' 2020-08-03T19:54:01,900 adding 'metawibele/data/domain/GTEx_sigmoid_transverse_colon.txt.gz' 2020-08-03T19:54:01,910 adding 'metawibele/data/domain/Human_protein_Atlas_colon_rectum.txt.gz' 2020-08-03T19:54:01,929 adding 'metawibele/data/domain/Human_proteome_map_colon_rectum.txt.gz' 2020-08-03T19:54:01,961 adding 'metawibele/data/domain/INTERACTION.txt.gz' 2020-08-03T19:54:01,988 adding 'metawibele/data/domain/Illumina_Body_Map_colon.txt.gz' 2020-08-03T19:54:01,993 adding 'metawibele/data/domain/README.txt' 2020-08-03T19:54:02,013 adding 'metawibele/data/domain/gene_ontology.txt.gz' 2020-08-03T19:54:02,480 adding 'metawibele/data/domain/pdb_chain_pfam.tsv.gz' 2020-08-03T19:54:07,350 adding 'metawibele/data/domain/pdb_chain_taxonomy.tsv.gz' 2020-08-03T19:54:07,725 adding 'metawibele/data/domain/pfam_descriptions.txt.gz' 2020-08-03T19:54:07,732 adding 'metawibele/data/misc/vignette_function.tsv' 2020-08-03T19:54:07,735 adding 'metawibele/data/uniref/README.txt' 2020-08-03T19:54:08,145 adding 'metawibele/data/uniref/uniprot_human_pfam.tsv.gz' 2020-08-03T19:54:08,178 adding 'metawibele/data/uniref/uniprot_taxaID_mammalia.txt.gz' 2020-08-03T19:54:08,493 adding 'metawibele/data/uniref/uniprot_taxaID_microbiome.txt.gz' 2020-08-03T19:54:17,528 adding 'metawibele/data/uniref/uniprot_taxonomy.tsv.gz' 2020-08-03T19:54:18,133 adding 'metawibele/prioritize/__init__.py' 2020-08-03T19:54:18,153 adding 'metawibele/prioritize/filter_prioritization.py' 2020-08-03T19:54:18,169 adding 'metawibele/prioritize/finalize_prioritization.py' 2020-08-03T19:54:18,192 adding 'metawibele/prioritize/quantify_prioritization.py' 2020-08-03T19:54:18,229 adding 'metawibele/tasks/__init__.py' 2020-08-03T19:54:18,250 adding 'metawibele/tasks/characterization.py' 2020-08-03T19:54:18,255 adding 'metawibele/tasks/prioritization.py' 2020-08-03T19:54:18,259 adding 'metawibele/tools/__init__.py' 2020-08-03T19:54:18,263 adding 'metawibele/tools/combine_gene_sequences.py' 2020-08-03T19:54:18,266 adding 'metawibele/tools/extract_cluster_CD_hit.py' 2020-08-03T19:54:18,269 adding 'metawibele/tools/extract_complete_ORF_seq.py' 2020-08-03T19:54:18,272 adding 'metawibele/tools/extract_non_redundance_seq.py' 2020-08-03T19:54:18,274 adding 'metawibele/tools/extract_protein_coding_genes.py' 2020-08-03T19:54:18,277 adding 'metawibele/tools/format_contig_sequences.py' 2020-08-03T19:54:18,281 adding 'metawibele/tools/format_protein_sequences.py' 2020-08-03T19:54:18,284 adding 'metawibele/tools/gene_abundance.py' 2020-08-03T19:54:18,287 adding 'metawibele/tools/gene_abundance_indexRef.py' 2020-08-03T19:54:18,290 adding 'metawibele/tools/gene_catalog_abundance.py' 2020-08-03T19:54:18,295 adding 'metawibele/tools/preprocessing_tasks.py' 2020-08-03T19:54:18,300 adding 'metawibele/workflows/characterize.py' 2020-08-03T19:54:18,304 adding 'metawibele/workflows/preprocess.py' 2020-08-03T19:54:18,307 adding 'metawibele/workflows/prioritize.py' 2020-08-03T19:54:18,313 adding 'metawibele-0.3.6.data/scripts/characterize.py' 2020-08-03T19:54:18,317 adding 'metawibele-0.3.6.data/scripts/preprocess.py' 2020-08-03T19:54:18,320 adding 'metawibele-0.3.6.data/scripts/prioritize.py' 2020-08-03T19:54:18,328 adding 'metawibele-0.3.6.dist-info/LICENSE' 2020-08-03T19:54:18,329 adding 'metawibele-0.3.6.dist-info/METADATA' 2020-08-03T19:54:18,331 adding 'metawibele-0.3.6.dist-info/WHEEL' 2020-08-03T19:54:18,333 adding 'metawibele-0.3.6.dist-info/entry_points.txt' 2020-08-03T19:54:18,335 adding 'metawibele-0.3.6.dist-info/top_level.txt' 2020-08-03T19:54:18,337 adding 'metawibele-0.3.6.dist-info/RECORD' 2020-08-03T19:54:23,900 removing build/bdist.linux-armv7l/wheel 2020-08-03T19:54:24,189 Building wheel for metawibele (setup.py): finished with status 'done' 2020-08-03T19:54:25,238 Created wheel for metawibele: filename=metawibele-0.3.6-py3-none-any.whl size=72573550 sha256=03b55d9f46bd54f37123113aea5c00299a9ed72cc564bd0638ffd79634f31927 2020-08-03T19:54:25,239 Stored in directory: /tmp/pip-ephem-wheel-cache-igq548ub/wheels/d9/38/9e/18df36fad58eb884c94a14c79a75ef295e72fe4521fc70218a 2020-08-03T19:54:25,242 Successfully built metawibele 2020-08-03T19:54:37,856 Removed build tracker: '/tmp/pip-req-tracker-q9fc2le7'