2020-08-05T16:31:52,962 Created temporary directory: /tmp/pip-ephem-wheel-cache-r4axgdpx
2020-08-05T16:31:52,965 Created temporary directory: /tmp/pip-req-tracker-wsuak3bs
2020-08-05T16:31:52,966 Initialized build tracking at /tmp/pip-req-tracker-wsuak3bs
2020-08-05T16:31:52,968 Created build tracker: /tmp/pip-req-tracker-wsuak3bs
2020-08-05T16:31:52,968 Entered build tracker: /tmp/pip-req-tracker-wsuak3bs
2020-08-05T16:31:52,969 Created temporary directory: /tmp/pip-wheel-cfbi0hdo
2020-08-05T16:31:52,987 1 location(s) to search for versions of neoepiscope:
2020-08-05T16:31:52,987 * https://pypi.org/simple/neoepiscope/
2020-08-05T16:31:52,988 Fetching project page and analyzing links: https://pypi.org/simple/neoepiscope/
2020-08-05T16:31:52,990 Getting page https://pypi.org/simple/neoepiscope/
2020-08-05T16:31:52,994 Found index url https://pypi.org/simple
2020-08-05T16:31:53,291   Skipping link: No binaries permitted for neoepiscope: https://files.pythonhosted.org/packages/b4/ba/522219aa8b8352160f6ba2ca61097738afa2c6920b9a7bbd4da50fcc8da0/neoepiscope-0.2.0-py2-none-any.whl#sha256=55346d80fe30aa74364285c46bc69a3afae1a06a979388b831f697672874c722 (from https://pypi.org/simple/neoepiscope/)
2020-08-05T16:31:53,292   Found link https://files.pythonhosted.org/packages/3e/8c/95683b457bffe28795c95717a5ccaf84553b6dd882f4955b0a79c6c00f5f/neoepiscope-0.2.0.tar.gz#sha256=b76ee238ba61be0809f732b35982715bbbc52ced24581f28f618b1646340ae0c (from https://pypi.org/simple/neoepiscope/), version: 0.2.0
2020-08-05T16:31:53,293   Skipping link: No binaries permitted for neoepiscope: https://files.pythonhosted.org/packages/20/b1/e4c1c036f951cfa7751e0b28cd371354baf73abef4f1cdae96f7a8b5ab63/neoepiscope-0.2.1-py3-none-any.whl#sha256=bb5ec6fd4e55f07b36c92973a37ece0d2679ef7e19b492e6adb5928104a9a474 (from https://pypi.org/simple/neoepiscope/)
2020-08-05T16:31:53,294   Found link https://files.pythonhosted.org/packages/d4/65/4109ba8cd2a59b73dbf5264eb5581e2e7a3c65dd1ca06276baf27d220a71/neoepiscope-0.2.1.tar.gz#sha256=cd0ad7717b6536aea87753f66eb066f6d42eb23656b04fb8d5df2e4ebe68eb2f (from https://pypi.org/simple/neoepiscope/), version: 0.2.1
2020-08-05T16:31:53,295   Skipping link: No binaries permitted for neoepiscope: https://files.pythonhosted.org/packages/b4/d5/07896094a43723acde6c2187030388f4c3bc06c718e17e2b4daa4a450de8/neoepiscope-0.3.0-py3-none-any.whl#sha256=59a923c59d94d2888611a877773b09686d65eaef84aefd75e39a920a4164193c (from https://pypi.org/simple/neoepiscope/)
2020-08-05T16:31:53,295   Found link https://files.pythonhosted.org/packages/09/9f/5bc3abded3c9d778cb938f12f65674dfc8feb2776b285d6a96504da6088e/neoepiscope-0.3.0.tar.gz#sha256=24a976a582e9cde446429da56efd0554509e2654a8ee5c259eea7c7d6251c810 (from https://pypi.org/simple/neoepiscope/), version: 0.3.0
2020-08-05T16:31:53,296   Skipping link: No binaries permitted for neoepiscope: https://files.pythonhosted.org/packages/0c/9a/116f487b911c68feee05aff085141cd055ce942f7a85777e1f5723b537c7/neoepiscope-0.3.1-py3-none-any.whl#sha256=c3ef199ced1ebc76a603970b1dc24124f82e130dcd3d639fb1857289011577b7 (from https://pypi.org/simple/neoepiscope/)
2020-08-05T16:31:53,297   Found link https://files.pythonhosted.org/packages/90/ce/4c2b40bd4d52c819514c858f6a34aa5e71cd4ec19cb5f61f5ef004410ad6/neoepiscope-0.3.2.tar.gz#sha256=a7522d7d6312d3cf52efcb5fee940cc2e922f05b9684816d6173f22b606f377a (from https://pypi.org/simple/neoepiscope/), version: 0.3.2
2020-08-05T16:31:53,298   Skipping link: No binaries permitted for neoepiscope: https://files.pythonhosted.org/packages/73/20/96291bac14ab814e35c6f0174bebb13f022bffde78d329a2d285c711f54a/neoepiscope-0.3.3-py3-none-any.whl#sha256=6c1327b7a7312cd51e80a9d3b71a57159bf269a6fc68fbd7ae84867900df4bf5 (from https://pypi.org/simple/neoepiscope/)
2020-08-05T16:31:53,298   Found link https://files.pythonhosted.org/packages/f3/65/c4c3a874622c26b2d2dd21fae7e69c58097c2c0a26eea31741756c2fbe91/neoepiscope-0.3.3.tar.gz#sha256=0657ecfafbcbbd73603c3e568d12ebff2cac6549801f8532e515b56669007d73 (from https://pypi.org/simple/neoepiscope/), version: 0.3.3
2020-08-05T16:31:53,299   Skipping link: No binaries permitted for neoepiscope: https://files.pythonhosted.org/packages/16/8b/6b8821dc703180ad381576443ac70437e727f15f130af56d9901531de7ea/neoepiscope-0.3.5-py3-none-any.whl#sha256=08d23331f4bdd3fe3fd84a8a234b2c0107d67f23986042ae1e626910263d31dd (from https://pypi.org/simple/neoepiscope/)
2020-08-05T16:31:53,300   Found link https://files.pythonhosted.org/packages/2f/c7/4966ec20b2a6585079e779f04c8f27b45fb87396831b3e307217e648a31c/neoepiscope-0.3.5.tar.gz#sha256=80b001371258ec357c916d6e62a3d214bd65c3f02b10bd8c062f6df80709e89c (from https://pypi.org/simple/neoepiscope/), version: 0.3.5
2020-08-05T16:31:53,300   Skipping link: No binaries permitted for neoepiscope: https://files.pythonhosted.org/packages/84/7f/4867f0c45581629b5f21ba65ec6ef3d01682b4c0b613f72fc193e1ec9cb0/neoepiscope-0.3.6-py3-none-any.whl#sha256=26579db85b8c06c457931213394db1c3b8c100c18ee09a9cec3c131ff9e6f8b1 (from https://pypi.org/simple/neoepiscope/)
2020-08-05T16:31:53,301   Found link https://files.pythonhosted.org/packages/e2/4e/803495fc57d35325b8964c8952934ba1a983b622b91f14576560d2e46efd/neoepiscope-0.3.6.tar.gz#sha256=9113e2bc28ae009300078294d87e2ebb3fa78d2acf3af037a9bdc1f9692848a4 (from https://pypi.org/simple/neoepiscope/), version: 0.3.6
2020-08-05T16:31:53,302   Skipping link: No binaries permitted for neoepiscope: https://files.pythonhosted.org/packages/af/46/21b4c4aec657bd124c7c4615862856bc84dc7c5e02a9dc56ec7d5686a6c9/neoepiscope-0.3.7-py3-none-any.whl#sha256=c87e3ac8ae2cb4f8180638ae9ddd840f18ca71fa2f592f636149ae689ce6c738 (from https://pypi.org/simple/neoepiscope/)
2020-08-05T16:31:53,302   Found link https://files.pythonhosted.org/packages/b5/fe/19ec9eca338f513a4bea4e3fe902328d1924e2262aa497b1d55f3186af6f/neoepiscope-0.3.7.tar.gz#sha256=8a1a408003badfd74d7b4e98e00ce002365fe11e0310a0ed98976f2ac19e6c8f (from https://pypi.org/simple/neoepiscope/), version: 0.3.7
2020-08-05T16:31:53,303   Skipping link: No binaries permitted for neoepiscope: https://files.pythonhosted.org/packages/89/e4/bddb6cddefdcd2ae088978c92f88824919399021c76f07bd071834ce7860/neoepiscope-0.3.8-py3-none-any.whl#sha256=e6deed715d295cbac717251368b2e1f89a51d7a7dc4a51fe921dffbe2d396f8b (from https://pypi.org/simple/neoepiscope/)
2020-08-05T16:31:53,304   Found link https://files.pythonhosted.org/packages/2a/dc/e07b6fc22dfd00a4073e2a3131cf6d8b695c0c0700868967259583124e36/neoepiscope-0.3.8.tar.gz#sha256=75841da0a9bf326f01b9e00313b59ccaad014e2cd1d19d17c70cb724f52f7cbd (from https://pypi.org/simple/neoepiscope/), version: 0.3.8
2020-08-05T16:31:53,304   Skipping link: No binaries permitted for neoepiscope: https://files.pythonhosted.org/packages/76/19/102b36f7c46944f9c32f241371d688c9931c6c10a13e71479464f7cd0423/neoepiscope-0.3.9-py3-none-any.whl#sha256=a164543081e91824dbabdbece07e89480fcdf7909dda956d16ec9754669a55c8 (from https://pypi.org/simple/neoepiscope/)
2020-08-05T16:31:53,305   Found link https://files.pythonhosted.org/packages/2d/7b/7e86766ea6d4c430244d2ea8f4744fb48b41e1ca9ce744c1405277f0b125/neoepiscope-0.3.9.tar.gz#sha256=9a938363a1906b02a2b8e5747147c22e1653275cd0dbd4ccda223d7e9955b19c (from https://pypi.org/simple/neoepiscope/), version: 0.3.9
2020-08-05T16:31:53,306   Skipping link: No binaries permitted for neoepiscope: https://files.pythonhosted.org/packages/cc/b6/da7bd253985b26a4c6d35d6726bd79d464fd452332b98398a19fac52d56e/neoepiscope-0.4.0-py3-none-any.whl#sha256=ef22f79ce1e217526036861725fe051af511a0c03cca2a1d70e875bc6c5b4838 (from https://pypi.org/simple/neoepiscope/)
2020-08-05T16:31:53,306   Found link https://files.pythonhosted.org/packages/cb/c2/d7b12208d8a52a3deb2bb6a21abafd26e08c78e161e2fca27065e46fcd44/neoepiscope-0.4.0.tar.gz#sha256=0bf3f1953bbb8c9c70f56326b9785453bb7edc365a436f65614ac4a576829c02 (from https://pypi.org/simple/neoepiscope/), version: 0.4.0
2020-08-05T16:31:53,307   Skipping link: No binaries permitted for neoepiscope: https://files.pythonhosted.org/packages/78/40/eec86c7a45050fa7799b0cdbace2471445994433b756852e5e41129c48a6/neoepiscope-0.4.1-py3-none-any.whl#sha256=b4e360103f0463ffe5e39029f19bb4a6878c371af3636879e6d3d93c2ede394d (from https://pypi.org/simple/neoepiscope/)
2020-08-05T16:31:53,308   Found link https://files.pythonhosted.org/packages/df/3f/e40fccbd3f8df026b27e083b06fe315528ad0a205979e283ac2fafec6947/neoepiscope-0.4.1.tar.gz#sha256=d2490b37022f88e133a880bc9a2ceb5fabb6a9d3e23a43898cf1f12a97561948 (from https://pypi.org/simple/neoepiscope/), version: 0.4.1
2020-08-05T16:31:53,320 Given no hashes to check 1 links for project 'neoepiscope': discarding no candidates
2020-08-05T16:31:53,322 Using version 0.4.1 (newest of versions: 0.4.1)
2020-08-05T16:31:53,328 Collecting neoepiscope==0.4.1
2020-08-05T16:31:53,332   Created temporary directory: /tmp/pip-unpack-d23qdyou
2020-08-05T16:31:54,805   Downloading neoepiscope-0.4.1.tar.gz (25.4 MB)
2020-08-05T16:32:04,196   Added neoepiscope==0.4.1 from https://files.pythonhosted.org/packages/df/3f/e40fccbd3f8df026b27e083b06fe315528ad0a205979e283ac2fafec6947/neoepiscope-0.4.1.tar.gz#sha256=d2490b37022f88e133a880bc9a2ceb5fabb6a9d3e23a43898cf1f12a97561948 to build tracker '/tmp/pip-req-tracker-wsuak3bs'
2020-08-05T16:32:04,198     Running setup.py (path:/tmp/pip-wheel-cfbi0hdo/neoepiscope/setup.py) egg_info for package neoepiscope
2020-08-05T16:32:04,199     Created temporary directory: /tmp/pip-pip-egg-info-vkjo7dlf
2020-08-05T16:32:04,200     Running command python setup.py egg_info
2020-08-05T16:32:06,095     running egg_info
2020-08-05T16:32:06,100     creating /tmp/pip-pip-egg-info-vkjo7dlf/neoepiscope.egg-info
2020-08-05T16:32:06,102     writing dependency_links to /tmp/pip-pip-egg-info-vkjo7dlf/neoepiscope.egg-info/dependency_links.txt
2020-08-05T16:32:06,104     writing entry points to /tmp/pip-pip-egg-info-vkjo7dlf/neoepiscope.egg-info/entry_points.txt
2020-08-05T16:32:06,106     writing /tmp/pip-pip-egg-info-vkjo7dlf/neoepiscope.egg-info/PKG-INFO
2020-08-05T16:32:06,110     writing requirements to /tmp/pip-pip-egg-info-vkjo7dlf/neoepiscope.egg-info/requires.txt
2020-08-05T16:32:06,112     writing top-level names to /tmp/pip-pip-egg-info-vkjo7dlf/neoepiscope.egg-info/top_level.txt
2020-08-05T16:32:06,115     writing manifest file '/tmp/pip-pip-egg-info-vkjo7dlf/neoepiscope.egg-info/SOURCES.txt'
2020-08-05T16:32:06,420     reading manifest file '/tmp/pip-pip-egg-info-vkjo7dlf/neoepiscope.egg-info/SOURCES.txt'
2020-08-05T16:32:06,422     reading manifest template 'MANIFEST.in'
2020-08-05T16:32:06,431     writing manifest file '/tmp/pip-pip-egg-info-vkjo7dlf/neoepiscope.egg-info/SOURCES.txt'
2020-08-05T16:32:06,559   Source in /tmp/pip-wheel-cfbi0hdo/neoepiscope has version 0.4.1, which satisfies requirement neoepiscope==0.4.1 from https://files.pythonhosted.org/packages/df/3f/e40fccbd3f8df026b27e083b06fe315528ad0a205979e283ac2fafec6947/neoepiscope-0.4.1.tar.gz#sha256=d2490b37022f88e133a880bc9a2ceb5fabb6a9d3e23a43898cf1f12a97561948
2020-08-05T16:32:06,560   Removed neoepiscope==0.4.1 from https://files.pythonhosted.org/packages/df/3f/e40fccbd3f8df026b27e083b06fe315528ad0a205979e283ac2fafec6947/neoepiscope-0.4.1.tar.gz#sha256=d2490b37022f88e133a880bc9a2ceb5fabb6a9d3e23a43898cf1f12a97561948 from build tracker '/tmp/pip-req-tracker-wsuak3bs'
2020-08-05T16:32:06,563 Building wheels for collected packages: neoepiscope
2020-08-05T16:32:06,570   Created temporary directory: /tmp/pip-wheel-d154y863
2020-08-05T16:32:06,571   Building wheel for neoepiscope (setup.py): started
2020-08-05T16:32:06,571   Destination directory: /tmp/pip-wheel-d154y863
2020-08-05T16:32:06,572   Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-cfbi0hdo/neoepiscope/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-cfbi0hdo/neoepiscope/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-d154y863
2020-08-05T16:32:08,492   running bdist_wheel
2020-08-05T16:32:08,502   running build
2020-08-05T16:32:08,502   running build_py
2020-08-05T16:32:08,787   creating build
2020-08-05T16:32:08,788   creating build/lib
2020-08-05T16:32:08,789   creating build/lib/neoepiscope
2020-08-05T16:32:08,790   copying neoepiscope/paths.py -> build/lib/neoepiscope
2020-08-05T16:32:08,793   copying neoepiscope/__main__.py -> build/lib/neoepiscope
2020-08-05T16:32:08,796   copying neoepiscope/file_processing.py -> build/lib/neoepiscope
2020-08-05T16:32:08,800   copying neoepiscope/binding_scores.py -> build/lib/neoepiscope
2020-08-05T16:32:08,807   copying neoepiscope/__init__.py -> build/lib/neoepiscope
2020-08-05T16:32:08,811   copying neoepiscope/bowtie_index.py -> build/lib/neoepiscope
2020-08-05T16:32:08,815   copying neoepiscope/download.py -> build/lib/neoepiscope
2020-08-05T16:32:08,819   copying neoepiscope/transcript_expression.py -> build/lib/neoepiscope
2020-08-05T16:32:08,823   copying neoepiscope/transcript.py -> build/lib/neoepiscope
2020-08-05T16:32:08,832   copying neoepiscope/version.py -> build/lib/neoepiscope
2020-08-05T16:32:08,834   running egg_info
2020-08-05T16:32:08,859   writing dependency_links to neoepiscope.egg-info/dependency_links.txt
2020-08-05T16:32:08,861   writing neoepiscope.egg-info/PKG-INFO
2020-08-05T16:32:08,864   writing entry points to neoepiscope.egg-info/entry_points.txt
2020-08-05T16:32:08,866   writing requirements to neoepiscope.egg-info/requires.txt
2020-08-05T16:32:08,867   writing top-level names to neoepiscope.egg-info/top_level.txt
2020-08-05T16:32:08,877   reading manifest file 'neoepiscope.egg-info/SOURCES.txt'
2020-08-05T16:32:08,880   reading manifest template 'MANIFEST.in'
2020-08-05T16:32:08,890   writing manifest file 'neoepiscope.egg-info/SOURCES.txt'
2020-08-05T16:32:08,897   copying neoepiscope/PSSMHCpan1Sizes.pickle -> build/lib/neoepiscope
2020-08-05T16:32:08,901   copying neoepiscope/ambiguousEpitopeID.pickle -> build/lib/neoepiscope
2020-08-05T16:32:08,906   copying neoepiscope/availableAlleles.pickle -> build/lib/neoepiscope
2020-08-05T16:32:09,041   copying neoepiscope/epitopeID.pickle -> build/lib/neoepiscope
2020-08-05T16:32:11,321   installing to build/bdist.linux-armv7l/wheel
2020-08-05T16:32:11,322   running install
2020-08-05T16:32:11,323   running install_lib
2020-08-05T16:32:11,331   creating build/bdist.linux-armv7l
2020-08-05T16:32:11,332   creating build/bdist.linux-armv7l/wheel
2020-08-05T16:32:11,334   creating build/bdist.linux-armv7l/wheel/neoepiscope
2020-08-05T16:32:11,336   copying build/lib/neoepiscope/epitopeID.pickle -> build/bdist.linux-armv7l/wheel/neoepiscope
2020-08-05T16:32:13,408   copying build/lib/neoepiscope/paths.py -> build/bdist.linux-armv7l/wheel/neoepiscope
2020-08-05T16:32:13,411   copying build/lib/neoepiscope/__main__.py -> build/bdist.linux-armv7l/wheel/neoepiscope
2020-08-05T16:32:13,415   copying build/lib/neoepiscope/file_processing.py -> build/bdist.linux-armv7l/wheel/neoepiscope
2020-08-05T16:32:13,420   copying build/lib/neoepiscope/binding_scores.py -> build/bdist.linux-armv7l/wheel/neoepiscope
2020-08-05T16:32:13,428   copying build/lib/neoepiscope/__init__.py -> build/bdist.linux-armv7l/wheel/neoepiscope
2020-08-05T16:32:13,433   copying build/lib/neoepiscope/bowtie_index.py -> build/bdist.linux-armv7l/wheel/neoepiscope
2020-08-05T16:32:13,437   copying build/lib/neoepiscope/download.py -> build/bdist.linux-armv7l/wheel/neoepiscope
2020-08-05T16:32:13,443   copying build/lib/neoepiscope/ambiguousEpitopeID.pickle -> build/bdist.linux-armv7l/wheel/neoepiscope
2020-08-05T16:32:13,448   copying build/lib/neoepiscope/transcript_expression.py -> build/bdist.linux-armv7l/wheel/neoepiscope
2020-08-05T16:32:13,452   copying build/lib/neoepiscope/PSSMHCpan1Sizes.pickle -> build/bdist.linux-armv7l/wheel/neoepiscope
2020-08-05T16:32:13,456   copying build/lib/neoepiscope/transcript.py -> build/bdist.linux-armv7l/wheel/neoepiscope
2020-08-05T16:32:13,467   copying build/lib/neoepiscope/availableAlleles.pickle -> build/bdist.linux-armv7l/wheel/neoepiscope
2020-08-05T16:32:13,602   copying build/lib/neoepiscope/version.py -> build/bdist.linux-armv7l/wheel/neoepiscope
2020-08-05T16:32:13,605   running install_egg_info
2020-08-05T16:32:13,620   Copying neoepiscope.egg-info to build/bdist.linux-armv7l/wheel/neoepiscope-0.4.1-py3.5.egg-info
2020-08-05T16:32:13,645   running install_scripts
2020-08-05T16:32:13,815   creating build/bdist.linux-armv7l/wheel/neoepiscope-0.4.1.dist-info/WHEEL
2020-08-05T16:32:34,337   Building wheel for neoepiscope (setup.py): finished with status 'done'
2020-08-05T16:32:34,693   Created wheel for neoepiscope: filename=neoepiscope-0.4.1-py3-none-any.whl size=25318483 sha256=fb9555550c248ea0d4b4190f246eee53cc9e4b25e659afa325cf89586ffe8733
2020-08-05T16:32:34,694   Stored in directory: /tmp/pip-ephem-wheel-cache-r4axgdpx/wheels/f3/f7/4b/0b32400064dc910085a41392d48ff4a45af60dee174587bf4d
2020-08-05T16:32:34,697 Successfully built neoepiscope
2020-08-05T16:32:43,038 Removed build tracker: '/tmp/pip-req-tracker-wsuak3bs'