2020-08-06T21:48:27,136 Created temporary directory: /tmp/pip-ephem-wheel-cache-dzxzdgfv 2020-08-06T21:48:27,142 Created temporary directory: /tmp/pip-req-tracker-eax6asjn 2020-08-06T21:48:27,143 Initialized build tracking at /tmp/pip-req-tracker-eax6asjn 2020-08-06T21:48:27,144 Created build tracker: /tmp/pip-req-tracker-eax6asjn 2020-08-06T21:48:27,144 Entered build tracker: /tmp/pip-req-tracker-eax6asjn 2020-08-06T21:48:27,146 Created temporary directory: /tmp/pip-wheel-8f2exzzl 2020-08-06T21:48:27,167 1 location(s) to search for versions of pyhealth: 2020-08-06T21:48:27,167 * https://pypi.org/simple/pyhealth/ 2020-08-06T21:48:27,168 Fetching project page and analyzing links: https://pypi.org/simple/pyhealth/ 2020-08-06T21:48:27,170 Getting page https://pypi.org/simple/pyhealth/ 2020-08-06T21:48:27,175 Found index url https://pypi.org/simple 2020-08-06T21:48:27,526 Found link https://files.pythonhosted.org/packages/d7/16/f75c72ee473687111c496c819ffcbe431a096ae9d96223ab17d67d97377e/pyhealth-0.0.0.tar.gz#sha256=d9ecbffc763c9f6118be2e64919a38f1d86f344831b7929918749fd0daad3f5e (from https://pypi.org/simple/pyhealth/), version: 0.0.0 2020-08-06T21:48:27,527 Found link https://files.pythonhosted.org/packages/f3/76/9a6b39321d728c5263a5db2e0a293d8dea57460473f0370e4202eee7c471/pyhealth-0.0.1.tar.gz#sha256=fc7bd16afb678f2dcc76232e318c5337db9247e6198615eb165a8c57698330e8 (from https://pypi.org/simple/pyhealth/), version: 0.0.1 2020-08-06T21:48:27,528 Found link https://files.pythonhosted.org/packages/bc/2e/4fb0b0ffc738f9d39397803a491f757ad0cb5944d9baa1b9f13c810b8dbd/pyhealth-0.0.2.tar.gz#sha256=bf76c7b821523176cb92265a5a7388e28352601fc852973fabe39c864a0d2639 (from https://pypi.org/simple/pyhealth/), version: 0.0.2 2020-08-06T21:48:27,539 Given no hashes to check 1 links for project 'pyhealth': discarding no candidates 2020-08-06T21:48:27,541 Using version 0.0.2 (newest of versions: 0.0.2) 2020-08-06T21:48:27,548 Collecting pyhealth==0.0.2 2020-08-06T21:48:27,553 Created temporary directory: /tmp/pip-unpack-ivpf288d 2020-08-06T21:48:28,385 Downloading pyhealth-0.0.2.tar.gz (44 kB) 2020-08-06T21:48:28,657 Added pyhealth==0.0.2 from https://files.pythonhosted.org/packages/bc/2e/4fb0b0ffc738f9d39397803a491f757ad0cb5944d9baa1b9f13c810b8dbd/pyhealth-0.0.2.tar.gz#sha256=bf76c7b821523176cb92265a5a7388e28352601fc852973fabe39c864a0d2639 to build tracker '/tmp/pip-req-tracker-eax6asjn' 2020-08-06T21:48:28,660 Running setup.py (path:/tmp/pip-wheel-8f2exzzl/pyhealth/setup.py) egg_info for package pyhealth 2020-08-06T21:48:28,661 Created temporary directory: /tmp/pip-pip-egg-info-me99b1qr 2020-08-06T21:48:28,662 Running command python setup.py egg_info 2020-08-06T21:48:31,279 running egg_info 2020-08-06T21:48:31,285 creating /tmp/pip-pip-egg-info-me99b1qr/pyhealth.egg-info 2020-08-06T21:48:31,288 writing top-level names to /tmp/pip-pip-egg-info-me99b1qr/pyhealth.egg-info/top_level.txt 2020-08-06T21:48:31,291 writing requirements to /tmp/pip-pip-egg-info-me99b1qr/pyhealth.egg-info/requires.txt 2020-08-06T21:48:31,294 writing dependency_links to /tmp/pip-pip-egg-info-me99b1qr/pyhealth.egg-info/dependency_links.txt 2020-08-06T21:48:31,296 writing /tmp/pip-pip-egg-info-me99b1qr/pyhealth.egg-info/PKG-INFO 2020-08-06T21:48:31,306 writing manifest file '/tmp/pip-pip-egg-info-me99b1qr/pyhealth.egg-info/SOURCES.txt' 2020-08-06T21:48:31,681 reading manifest file '/tmp/pip-pip-egg-info-me99b1qr/pyhealth.egg-info/SOURCES.txt' 2020-08-06T21:48:31,684 reading manifest template 'MANIFEST.in' 2020-08-06T21:48:31,687 no previously-included directories found matching 'datasets' 2020-08-06T21:48:31,688 no previously-included directories found matching 'docs' 2020-08-06T21:48:31,689 no previously-included directories found matching 'examples' 2020-08-06T21:48:31,690 no previously-included directories found matching 'pyhealth/test' 2020-08-06T21:48:31,698 writing manifest file '/tmp/pip-pip-egg-info-me99b1qr/pyhealth.egg-info/SOURCES.txt' 2020-08-06T21:48:31,853 Source in /tmp/pip-wheel-8f2exzzl/pyhealth has version 0.0.2, which satisfies requirement pyhealth==0.0.2 from https://files.pythonhosted.org/packages/bc/2e/4fb0b0ffc738f9d39397803a491f757ad0cb5944d9baa1b9f13c810b8dbd/pyhealth-0.0.2.tar.gz#sha256=bf76c7b821523176cb92265a5a7388e28352601fc852973fabe39c864a0d2639 2020-08-06T21:48:31,855 Removed pyhealth==0.0.2 from https://files.pythonhosted.org/packages/bc/2e/4fb0b0ffc738f9d39397803a491f757ad0cb5944d9baa1b9f13c810b8dbd/pyhealth-0.0.2.tar.gz#sha256=bf76c7b821523176cb92265a5a7388e28352601fc852973fabe39c864a0d2639 from build tracker '/tmp/pip-req-tracker-eax6asjn' 2020-08-06T21:48:31,867 Building wheels for collected packages: pyhealth 2020-08-06T21:48:31,876 Created temporary directory: /tmp/pip-wheel-t34zspck 2020-08-06T21:48:31,877 Building wheel for pyhealth (setup.py): started 2020-08-06T21:48:31,878 Destination directory: /tmp/pip-wheel-t34zspck 2020-08-06T21:48:31,879 Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-8f2exzzl/pyhealth/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-8f2exzzl/pyhealth/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-t34zspck 2020-08-06T21:48:34,497 running bdist_wheel 2020-08-06T21:48:34,514 running build 2020-08-06T21:48:34,515 running build_py 2020-08-06T21:48:34,869 creating build 2020-08-06T21:48:34,870 creating build/lib 2020-08-06T21:48:34,871 creating build/lib/pyhealth 2020-08-06T21:48:34,874 copying pyhealth/__init__.py -> build/lib/pyhealth 2020-08-06T21:48:34,877 copying pyhealth/version.py -> build/lib/pyhealth 2020-08-06T21:48:34,882 creating build/lib/pyhealth/models 2020-08-06T21:48:34,885 copying pyhealth/models/attentionmodel.py -> build/lib/pyhealth/models 2020-08-06T21:48:34,892 copying pyhealth/models/tlstm.py -> build/lib/pyhealth/models 2020-08-06T21:48:34,900 copying pyhealth/models/retain.py -> build/lib/pyhealth/models 2020-08-06T21:48:34,907 copying pyhealth/models/embedgru.py -> build/lib/pyhealth/models 2020-08-06T21:48:34,915 copying pyhealth/models/gru.py -> build/lib/pyhealth/models 2020-08-06T21:48:34,922 copying pyhealth/models/base.py -> build/lib/pyhealth/models 2020-08-06T21:48:34,930 copying pyhealth/models/__init__.py -> build/lib/pyhealth/models 2020-08-06T21:48:34,935 copying pyhealth/models/lstm.py -> build/lib/pyhealth/models 2020-08-06T21:48:34,942 copying pyhealth/models/dipole.py -> build/lib/pyhealth/models 2020-08-06T21:48:34,950 copying pyhealth/models/raim.py -> build/lib/pyhealth/models 2020-08-06T21:48:34,960 creating build/lib/pyhealth/data 2020-08-06T21:48:34,963 copying pyhealth/data/expdata_generator.py -> build/lib/pyhealth/data 2020-08-06T21:48:34,972 copying pyhealth/data/base_mimic.py -> build/lib/pyhealth/data 2020-08-06T21:48:34,978 copying pyhealth/data/base_dataset.py -> build/lib/pyhealth/data 2020-08-06T21:48:34,982 copying pyhealth/data/base.py -> build/lib/pyhealth/data 2020-08-06T21:48:34,986 copying pyhealth/data/base_cms.py -> build/lib/pyhealth/data 2020-08-06T21:48:34,991 copying pyhealth/data/mimic_clean_methods.py -> build/lib/pyhealth/data 2020-08-06T21:48:34,997 copying pyhealth/data/__init__.py -> build/lib/pyhealth/data 2020-08-06T21:48:35,002 copying pyhealth/data/rnn_reader.py -> build/lib/pyhealth/data 2020-08-06T21:48:35,009 creating build/lib/pyhealth/utils 2020-08-06T21:48:35,012 copying pyhealth/utils/checklist.py -> build/lib/pyhealth/utils 2020-08-06T21:48:35,017 copying pyhealth/utils/utility_parallel.py -> build/lib/pyhealth/utils 2020-08-06T21:48:35,021 copying pyhealth/utils/__init__.py -> build/lib/pyhealth/utils 2020-08-06T21:48:35,024 copying pyhealth/utils/loss.py -> build/lib/pyhealth/utils 2020-08-06T21:48:35,029 copying pyhealth/utils/utility.py -> build/lib/pyhealth/utils 2020-08-06T21:48:35,036 creating build/lib/pyhealth/evaluation 2020-08-06T21:48:35,040 copying pyhealth/evaluation/evaluator.py -> build/lib/pyhealth/evaluation 2020-08-06T21:48:35,046 copying pyhealth/evaluation/mortality.py -> build/lib/pyhealth/evaluation 2020-08-06T21:48:35,052 copying pyhealth/evaluation/phenotyping.py -> build/lib/pyhealth/evaluation 2020-08-06T21:48:35,056 copying pyhealth/evaluation/binaryclass.py -> build/lib/pyhealth/evaluation 2020-08-06T21:48:35,061 copying pyhealth/evaluation/multilabel.py -> build/lib/pyhealth/evaluation 2020-08-06T21:48:35,064 copying pyhealth/evaluation/__init__.py -> build/lib/pyhealth/evaluation 2020-08-06T21:48:35,068 running egg_info 2020-08-06T21:48:35,098 writing top-level names to pyhealth.egg-info/top_level.txt 2020-08-06T21:48:35,100 writing dependency_links to pyhealth.egg-info/dependency_links.txt 2020-08-06T21:48:35,104 writing requirements to pyhealth.egg-info/requires.txt 2020-08-06T21:48:35,106 writing pyhealth.egg-info/PKG-INFO 2020-08-06T21:48:35,127 reading manifest file 'pyhealth.egg-info/SOURCES.txt' 2020-08-06T21:48:35,132 reading manifest template 'MANIFEST.in' 2020-08-06T21:48:35,134 no previously-included directories found matching 'datasets' 2020-08-06T21:48:35,135 no previously-included directories found matching 'docs' 2020-08-06T21:48:35,137 no previously-included directories found matching 'examples' 2020-08-06T21:48:35,138 no previously-included directories found matching 'pyhealth/test' 2020-08-06T21:48:35,148 writing manifest file 'pyhealth.egg-info/SOURCES.txt' 2020-08-06T21:48:35,168 installing to build/bdist.linux-armv7l/wheel 2020-08-06T21:48:35,169 running install 2020-08-06T21:48:35,171 running install_lib 2020-08-06T21:48:35,180 creating build/bdist.linux-armv7l 2020-08-06T21:48:35,181 creating build/bdist.linux-armv7l/wheel 2020-08-06T21:48:35,184 creating build/bdist.linux-armv7l/wheel/pyhealth 2020-08-06T21:48:35,188 creating build/bdist.linux-armv7l/wheel/pyhealth/models 2020-08-06T21:48:35,190 copying build/lib/pyhealth/models/attentionmodel.py -> build/bdist.linux-armv7l/wheel/pyhealth/models 2020-08-06T21:48:35,198 copying build/lib/pyhealth/models/tlstm.py -> build/bdist.linux-armv7l/wheel/pyhealth/models 2020-08-06T21:48:35,205 copying build/lib/pyhealth/models/retain.py -> build/bdist.linux-armv7l/wheel/pyhealth/models 2020-08-06T21:48:35,212 copying build/lib/pyhealth/models/embedgru.py -> build/bdist.linux-armv7l/wheel/pyhealth/models 2020-08-06T21:48:35,219 copying build/lib/pyhealth/models/gru.py -> build/bdist.linux-armv7l/wheel/pyhealth/models 2020-08-06T21:48:35,227 copying build/lib/pyhealth/models/base.py -> build/bdist.linux-armv7l/wheel/pyhealth/models 2020-08-06T21:48:35,234 copying build/lib/pyhealth/models/__init__.py -> build/bdist.linux-armv7l/wheel/pyhealth/models 2020-08-06T21:48:35,239 copying build/lib/pyhealth/models/lstm.py -> build/bdist.linux-armv7l/wheel/pyhealth/models 2020-08-06T21:48:35,246 copying build/lib/pyhealth/models/dipole.py -> build/bdist.linux-armv7l/wheel/pyhealth/models 2020-08-06T21:48:35,254 copying build/lib/pyhealth/models/raim.py -> build/bdist.linux-armv7l/wheel/pyhealth/models 2020-08-06T21:48:35,263 creating build/bdist.linux-armv7l/wheel/pyhealth/data 2020-08-06T21:48:35,266 copying build/lib/pyhealth/data/expdata_generator.py -> build/bdist.linux-armv7l/wheel/pyhealth/data 2020-08-06T21:48:35,274 copying build/lib/pyhealth/data/base_mimic.py -> build/bdist.linux-armv7l/wheel/pyhealth/data 2020-08-06T21:48:35,281 copying build/lib/pyhealth/data/base_dataset.py -> build/bdist.linux-armv7l/wheel/pyhealth/data 2020-08-06T21:48:35,286 copying build/lib/pyhealth/data/base.py -> build/bdist.linux-armv7l/wheel/pyhealth/data 2020-08-06T21:48:35,292 copying build/lib/pyhealth/data/base_cms.py -> build/bdist.linux-armv7l/wheel/pyhealth/data 2020-08-06T21:48:35,298 copying build/lib/pyhealth/data/mimic_clean_methods.py -> build/bdist.linux-armv7l/wheel/pyhealth/data 2020-08-06T21:48:35,305 copying build/lib/pyhealth/data/__init__.py -> build/bdist.linux-armv7l/wheel/pyhealth/data 2020-08-06T21:48:35,309 copying build/lib/pyhealth/data/rnn_reader.py -> build/bdist.linux-armv7l/wheel/pyhealth/data 2020-08-06T21:48:35,316 creating build/bdist.linux-armv7l/wheel/pyhealth/utils 2020-08-06T21:48:35,319 copying build/lib/pyhealth/utils/checklist.py -> build/bdist.linux-armv7l/wheel/pyhealth/utils 2020-08-06T21:48:35,325 copying build/lib/pyhealth/utils/utility_parallel.py -> build/bdist.linux-armv7l/wheel/pyhealth/utils 2020-08-06T21:48:35,330 copying build/lib/pyhealth/utils/__init__.py -> build/bdist.linux-armv7l/wheel/pyhealth/utils 2020-08-06T21:48:35,335 copying build/lib/pyhealth/utils/loss.py -> build/bdist.linux-armv7l/wheel/pyhealth/utils 2020-08-06T21:48:35,341 copying build/lib/pyhealth/utils/utility.py -> build/bdist.linux-armv7l/wheel/pyhealth/utils 2020-08-06T21:48:35,349 creating build/bdist.linux-armv7l/wheel/pyhealth/evaluation 2020-08-06T21:48:35,351 copying build/lib/pyhealth/evaluation/evaluator.py -> build/bdist.linux-armv7l/wheel/pyhealth/evaluation 2020-08-06T21:48:35,357 copying build/lib/pyhealth/evaluation/mortality.py -> build/bdist.linux-armv7l/wheel/pyhealth/evaluation 2020-08-06T21:48:35,363 copying build/lib/pyhealth/evaluation/phenotyping.py -> build/bdist.linux-armv7l/wheel/pyhealth/evaluation 2020-08-06T21:48:35,369 copying build/lib/pyhealth/evaluation/binaryclass.py -> build/bdist.linux-armv7l/wheel/pyhealth/evaluation 2020-08-06T21:48:35,374 copying build/lib/pyhealth/evaluation/multilabel.py -> build/bdist.linux-armv7l/wheel/pyhealth/evaluation 2020-08-06T21:48:35,380 copying build/lib/pyhealth/evaluation/__init__.py -> build/bdist.linux-armv7l/wheel/pyhealth/evaluation 2020-08-06T21:48:35,385 copying build/lib/pyhealth/__init__.py -> build/bdist.linux-armv7l/wheel/pyhealth 2020-08-06T21:48:35,390 copying build/lib/pyhealth/version.py -> build/bdist.linux-armv7l/wheel/pyhealth 2020-08-06T21:48:35,394 running install_egg_info 2020-08-06T21:48:35,419 Copying pyhealth.egg-info to build/bdist.linux-armv7l/wheel/pyhealth-0.0.2-py3.5.egg-info 2020-08-06T21:48:35,446 running install_scripts 2020-08-06T21:48:35,691 creating build/bdist.linux-armv7l/wheel/pyhealth-0.0.2.dist-info/WHEEL 2020-08-06T21:48:36,062 Building wheel for pyhealth (setup.py): finished with status 'done' 2020-08-06T21:48:36,067 Created wheel for pyhealth: filename=pyhealth-0.0.2-py3-none-any.whl size=68080 sha256=afd87b4a209da8a94fe14eba872401ced2fc905bda33966cc87cab217a550ccd 2020-08-06T21:48:36,068 Stored in directory: /tmp/pip-ephem-wheel-cache-dzxzdgfv/wheels/0c/3a/25/40d83f7bd516142955b44d6133da9fa7af9d054438a193e7f2 2020-08-06T21:48:36,072 Successfully built pyhealth 2020-08-06T21:48:36,091 Removed build tracker: '/tmp/pip-req-tracker-eax6asjn'