2020-08-11T16:09:34,326 Created temporary directory: /tmp/pip-ephem-wheel-cache-zg8izu_a 2020-08-11T16:09:34,331 Created temporary directory: /tmp/pip-req-tracker-mzzlsvdg 2020-08-11T16:09:34,332 Initialized build tracking at /tmp/pip-req-tracker-mzzlsvdg 2020-08-11T16:09:34,332 Created build tracker: /tmp/pip-req-tracker-mzzlsvdg 2020-08-11T16:09:34,332 Entered build tracker: /tmp/pip-req-tracker-mzzlsvdg 2020-08-11T16:09:34,333 Created temporary directory: /tmp/pip-wheel-t3bum8cs 2020-08-11T16:09:34,348 1 location(s) to search for versions of metawibele: 2020-08-11T16:09:34,348 * https://pypi.org/simple/metawibele/ 2020-08-11T16:09:34,348 Fetching project page and analyzing links: https://pypi.org/simple/metawibele/ 2020-08-11T16:09:34,349 Getting page https://pypi.org/simple/metawibele/ 2020-08-11T16:09:34,352 Found index url https://pypi.org/simple 2020-08-11T16:09:34,553 Found link https://files.pythonhosted.org/packages/63/dd/f7fdaebfa37a66521ba36f5cba08d441ef0517891897cbaedd4dc65c23c5/metawibele-0.3.5.tar.gz#sha256=4b6c0bc3a001d849ec3fc5231b0a2af5dd718897b70f839e6435e6f1b6809c62 (from https://pypi.org/simple/metawibele/), version: 0.3.5 2020-08-11T16:09:34,554 Found link https://files.pythonhosted.org/packages/c8/13/b19f1456a883f66cbe84a9994809a7b474c95920e502ab105b350d4a0d76/metawibele-0.3.6.tar.gz#sha256=801791f1cb8c79b56b2c484829304330894de9814a805405ecf715cd7cd30763 (from https://pypi.org/simple/metawibele/), version: 0.3.6 2020-08-11T16:09:34,555 Found link https://files.pythonhosted.org/packages/7c/19/af84f2863d296edd894ff917a516fabb124e1921b4ca6d5bc9fa0fffb969/metawibele-0.3.7.tar.gz#sha256=26607eb78cf3bf472f5dc45577bab9db80764ee5f08482a18feb2f235e1403b0 (from https://pypi.org/simple/metawibele/), version: 0.3.7 2020-08-11T16:09:34,563 Given no hashes to check 1 links for project 'metawibele': discarding no candidates 2020-08-11T16:09:34,564 Using version 0.3.7 (newest of versions: 0.3.7) 2020-08-11T16:09:34,571 Collecting metawibele==0.3.7 2020-08-11T16:09:34,574 Created temporary directory: /tmp/pip-unpack-1tcm1ixn 2020-08-11T16:09:34,687 Downloading metawibele-0.3.7.tar.gz (79.9 MB) 2020-08-11T16:10:05,794 Added metawibele==0.3.7 from https://files.pythonhosted.org/packages/7c/19/af84f2863d296edd894ff917a516fabb124e1921b4ca6d5bc9fa0fffb969/metawibele-0.3.7.tar.gz#sha256=26607eb78cf3bf472f5dc45577bab9db80764ee5f08482a18feb2f235e1403b0 to build tracker '/tmp/pip-req-tracker-mzzlsvdg' 2020-08-11T16:10:05,797 Running setup.py (path:/tmp/pip-wheel-t3bum8cs/metawibele/setup.py) egg_info for package metawibele 2020-08-11T16:10:05,798 Created temporary directory: /tmp/pip-pip-egg-info-n3e6mh9n 2020-08-11T16:10:05,799 Running command python setup.py egg_info 2020-08-11T16:10:07,713 running egg_info 2020-08-11T16:10:07,717 creating /tmp/pip-pip-egg-info-n3e6mh9n/metawibele.egg-info 2020-08-11T16:10:07,719 writing /tmp/pip-pip-egg-info-n3e6mh9n/metawibele.egg-info/PKG-INFO 2020-08-11T16:10:07,725 writing dependency_links to /tmp/pip-pip-egg-info-n3e6mh9n/metawibele.egg-info/dependency_links.txt 2020-08-11T16:10:07,734 writing entry points to /tmp/pip-pip-egg-info-n3e6mh9n/metawibele.egg-info/entry_points.txt 2020-08-11T16:10:07,739 writing top-level names to /tmp/pip-pip-egg-info-n3e6mh9n/metawibele.egg-info/top_level.txt 2020-08-11T16:10:07,742 writing manifest file '/tmp/pip-pip-egg-info-n3e6mh9n/metawibele.egg-info/SOURCES.txt' 2020-08-11T16:10:08,063 reading manifest file '/tmp/pip-pip-egg-info-n3e6mh9n/metawibele.egg-info/SOURCES.txt' 2020-08-11T16:10:08,067 reading manifest template 'MANIFEST.in' 2020-08-11T16:10:08,069 warning: no files found matching 'readme.md' 2020-08-11T16:10:08,110 writing manifest file '/tmp/pip-pip-egg-info-n3e6mh9n/metawibele.egg-info/SOURCES.txt' 2020-08-11T16:10:08,235 Source in /tmp/pip-wheel-t3bum8cs/metawibele has version 0.3.7, which satisfies requirement metawibele==0.3.7 from https://files.pythonhosted.org/packages/7c/19/af84f2863d296edd894ff917a516fabb124e1921b4ca6d5bc9fa0fffb969/metawibele-0.3.7.tar.gz#sha256=26607eb78cf3bf472f5dc45577bab9db80764ee5f08482a18feb2f235e1403b0 2020-08-11T16:10:08,236 Removed metawibele==0.3.7 from https://files.pythonhosted.org/packages/7c/19/af84f2863d296edd894ff917a516fabb124e1921b4ca6d5bc9fa0fffb969/metawibele-0.3.7.tar.gz#sha256=26607eb78cf3bf472f5dc45577bab9db80764ee5f08482a18feb2f235e1403b0 from build tracker '/tmp/pip-req-tracker-mzzlsvdg' 2020-08-11T16:10:08,239 Building wheels for collected packages: metawibele 2020-08-11T16:10:08,249 Created temporary directory: /tmp/pip-wheel-209f2bd2 2020-08-11T16:10:08,250 Building wheel for metawibele (setup.py): started 2020-08-11T16:10:08,250 Destination directory: /tmp/pip-wheel-209f2bd2 2020-08-11T16:10:08,251 Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-t3bum8cs/metawibele/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-t3bum8cs/metawibele/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-209f2bd2 2020-08-11T16:10:10,044 running bdist_wheel 2020-08-11T16:10:10,053 running build 2020-08-11T16:10:10,053 running build_py 2020-08-11T16:10:10,319 creating build 2020-08-11T16:10:10,319 creating build/lib 2020-08-11T16:10:10,321 creating build/lib/metawibele 2020-08-11T16:10:10,324 copying metawibele/__init__.py -> build/lib/metawibele 2020-08-11T16:10:10,328 copying metawibele/utilities.py -> build/lib/metawibele 2020-08-11T16:10:10,334 copying metawibele/check.py -> build/lib/metawibele 2020-08-11T16:10:10,338 copying metawibele/metawibele.py -> build/lib/metawibele 2020-08-11T16:10:10,343 copying metawibele/config.py -> build/lib/metawibele 2020-08-11T16:10:10,350 creating build/lib/metawibele/tasks 2020-08-11T16:10:10,352 copying metawibele/tasks/__init__.py -> build/lib/metawibele/tasks 2020-08-11T16:10:10,356 copying metawibele/tasks/prioritization.py -> build/lib/metawibele/tasks 2020-08-11T16:10:10,361 copying metawibele/tasks/characterization.py -> build/lib/metawibele/tasks 2020-08-11T16:10:10,375 creating build/lib/metawibele/common 2020-08-11T16:10:10,377 copying metawibele/common/combine_abundance_annotation.py -> build/lib/metawibele/common 2020-08-11T16:10:10,382 copying metawibele/common/join_family_abundance.py -> build/lib/metawibele/common 2020-08-11T16:10:10,386 copying metawibele/common/download_database.py -> build/lib/metawibele/common 2020-08-11T16:10:10,391 copying metawibele/common/abundance_smoothing.py -> build/lib/metawibele/common 2020-08-11T16:10:10,396 copying metawibele/common/__init__.py -> build/lib/metawibele/common 2020-08-11T16:10:10,399 copying metawibele/common/prepare_uniprot_annotation.py -> build/lib/metawibele/common 2020-08-11T16:10:10,404 copying metawibele/common/utils.py -> build/lib/metawibele/common 2020-08-11T16:10:10,411 copying metawibele/common/extract_abundance_feature_subset.py -> build/lib/metawibele/common 2020-08-11T16:10:10,416 copying metawibele/common/extract_abundance_sample_subset.py -> build/lib/metawibele/common 2020-08-11T16:10:10,420 copying metawibele/common/filter_prevalence.py -> build/lib/metawibele/common 2020-08-11T16:10:10,424 copying metawibele/common/extract_uniprot_pfam.py -> build/lib/metawibele/common 2020-08-11T16:10:10,430 copying metawibele/common/filter_clusters.py -> build/lib/metawibele/common 2020-08-11T16:10:10,434 copying metawibele/common/prepare_domain_databases.py -> build/lib/metawibele/common 2020-08-11T16:10:10,439 copying metawibele/common/transpose.py -> build/lib/metawibele/common 2020-08-11T16:10:10,443 copying metawibele/common/prepare_uniprot_taxonomy.py -> build/lib/metawibele/common 2020-08-11T16:10:10,448 copying metawibele/common/prepare_uniref_annotation.py -> build/lib/metawibele/common 2020-08-11T16:10:10,453 copying metawibele/common/abundance_RPK.py -> build/lib/metawibele/common 2020-08-11T16:10:10,458 copying metawibele/common/download_config_file.py -> build/lib/metawibele/common 2020-08-11T16:10:10,463 copying metawibele/common/abundance_filtering.py -> build/lib/metawibele/common 2020-08-11T16:10:10,468 copying metawibele/common/split_family_abundance.py -> build/lib/metawibele/common 2020-08-11T16:10:10,472 copying metawibele/common/abundance_normalization.py -> build/lib/metawibele/common 2020-08-11T16:10:10,478 copying metawibele/common/split_fasta_file.py -> build/lib/metawibele/common 2020-08-11T16:10:10,485 creating build/lib/metawibele/tools 2020-08-11T16:10:10,488 copying metawibele/tools/__init__.py -> build/lib/metawibele/tools 2020-08-11T16:10:10,492 copying metawibele/tools/extract_cluster_CD_hit.py -> build/lib/metawibele/tools 2020-08-11T16:10:10,498 copying metawibele/tools/gene_abundance_indexRef.py -> build/lib/metawibele/tools 2020-08-11T16:10:10,503 copying metawibele/tools/extract_protein_coding_genes.py -> build/lib/metawibele/tools 2020-08-11T16:10:10,509 copying metawibele/tools/extract_non_redundance_seq.py -> build/lib/metawibele/tools 2020-08-11T16:10:10,514 copying metawibele/tools/gene_abundance.py -> build/lib/metawibele/tools 2020-08-11T16:10:10,520 copying metawibele/tools/combine_gene_sequences.py -> build/lib/metawibele/tools 2020-08-11T16:10:10,525 copying metawibele/tools/format_protein_sequences.py -> build/lib/metawibele/tools 2020-08-11T16:10:10,531 copying metawibele/tools/gene_catalog_abundance.py -> build/lib/metawibele/tools 2020-08-11T16:10:10,536 copying metawibele/tools/preprocessing_tasks.py -> build/lib/metawibele/tools 2020-08-11T16:10:10,543 copying metawibele/tools/extract_complete_ORF_seq.py -> build/lib/metawibele/tools 2020-08-11T16:10:10,548 copying metawibele/tools/format_contig_sequences.py -> build/lib/metawibele/tools 2020-08-11T16:10:10,553 creating build/lib/metawibele/prioritize 2020-08-11T16:10:10,555 copying metawibele/prioritize/__init__.py -> build/lib/metawibele/prioritize 2020-08-11T16:10:10,559 copying metawibele/prioritize/quantify_prioritization.py -> build/lib/metawibele/prioritize 2020-08-11T16:10:10,565 copying metawibele/prioritize/finalize_prioritization.py -> build/lib/metawibele/prioritize 2020-08-11T16:10:10,570 copying metawibele/prioritize/filter_prioritization.py -> build/lib/metawibele/prioritize 2020-08-11T16:10:10,580 creating build/lib/metawibele/characterize 2020-08-11T16:10:10,582 copying metawibele/characterize/maaslin2_annotator.py -> build/lib/metawibele/characterize 2020-08-11T16:10:10,588 copying metawibele/characterize/__init__.py -> build/lib/metawibele/characterize 2020-08-11T16:10:10,591 copying metawibele/characterize/summary_function_annotation.py -> build/lib/metawibele/characterize 2020-08-11T16:10:10,596 copying metawibele/characterize/utils.py -> build/lib/metawibele/characterize 2020-08-11T16:10:10,601 copying metawibele/characterize/uniref_annotator.py -> build/lib/metawibele/characterize 2020-08-11T16:10:10,607 copying metawibele/characterize/ddi_DOMINE_ExpAtlas.py -> build/lib/metawibele/characterize 2020-08-11T16:10:10,612 copying metawibele/characterize/interproscan_signalp_protein_family.py -> build/lib/metawibele/characterize 2020-08-11T16:10:10,617 copying metawibele/characterize/mspminer_protein_family_taxonomy.py -> build/lib/metawibele/characterize 2020-08-11T16:10:10,623 copying metawibele/characterize/summary_protein_family_uniref_annotation.py -> build/lib/metawibele/characterize 2020-08-11T16:10:10,629 copying metawibele/characterize/summary_all_annotation.py -> build/lib/metawibele/characterize 2020-08-11T16:10:10,634 copying metawibele/characterize/interproscan_protein.py -> build/lib/metawibele/characterize 2020-08-11T16:10:10,639 copying metawibele/characterize/metadata_format.py -> build/lib/metawibele/characterize 2020-08-11T16:10:10,644 copying metawibele/characterize/uniref_annotator_stat.py -> build/lib/metawibele/characterize 2020-08-11T16:10:10,649 copying metawibele/characterize/interproscan_tmhmm_protein_family.py -> build/lib/metawibele/characterize 2020-08-11T16:10:10,654 copying metawibele/characterize/maaslin2.py -> build/lib/metawibele/characterize 2020-08-11T16:10:10,659 copying metawibele/characterize/mspminer_protein.py -> build/lib/metawibele/characterize 2020-08-11T16:10:10,665 copying metawibele/characterize/pfam2go.py -> build/lib/metawibele/characterize 2020-08-11T16:10:10,670 copying metawibele/characterize/interproscan_annotator.py -> build/lib/metawibele/characterize 2020-08-11T16:10:10,674 copying metawibele/characterize/maaslin2_summary.py -> build/lib/metawibele/characterize 2020-08-11T16:10:10,680 copying metawibele/characterize/psortb_protein.py -> build/lib/metawibele/characterize 2020-08-11T16:10:10,685 copying metawibele/characterize/psortb_annotator.py -> build/lib/metawibele/characterize 2020-08-11T16:10:10,690 copying metawibele/characterize/mspminer_protein_family.py -> build/lib/metawibele/characterize 2020-08-11T16:10:10,696 copying metawibele/characterize/abundance_annotator.py -> build/lib/metawibele/characterize 2020-08-11T16:10:10,701 copying metawibele/characterize/mspminer_msp.py -> build/lib/metawibele/characterize 2020-08-11T16:10:10,706 copying metawibele/characterize/mspminer_msp_uniref_annotation.py -> build/lib/metawibele/characterize 2020-08-11T16:10:10,711 copying metawibele/characterize/interproscan_protein_family.py -> build/lib/metawibele/characterize 2020-08-11T16:10:10,716 copying metawibele/characterize/maaslin2_collection.py -> build/lib/metawibele/characterize 2020-08-11T16:10:10,723 copying metawibele/characterize/interproscan_pfam_protein_family.py -> build/lib/metawibele/characterize 2020-08-11T16:10:10,728 copying metawibele/characterize/msp_protein_family.py -> build/lib/metawibele/characterize 2020-08-11T16:10:10,733 copying metawibele/characterize/ddi_DOMINE_protein_family.py -> build/lib/metawibele/characterize 2020-08-11T16:10:10,739 copying metawibele/characterize/denovo_TM_SP.py -> build/lib/metawibele/characterize 2020-08-11T16:10:10,744 copying metawibele/characterize/interproscan_phobius_protein_family.py -> build/lib/metawibele/characterize 2020-08-11T16:10:10,750 copying metawibele/characterize/sum_to_protein_family_abundance.py -> build/lib/metawibele/characterize 2020-08-11T16:10:10,755 copying metawibele/characterize/uniref_protein_family.py -> build/lib/metawibele/characterize 2020-08-11T16:10:10,761 copying metawibele/characterize/uniref_protein.py -> build/lib/metawibele/characterize 2020-08-11T16:10:10,766 copying metawibele/characterize/mspminer_msp_taxonomy_annotation.py -> build/lib/metawibele/characterize 2020-08-11T16:10:10,772 copying metawibele/characterize/ddi_DOMINE_protein.py -> build/lib/metawibele/characterize 2020-08-11T16:10:10,777 copying metawibele/characterize/summary_protein_uniref_annotation.py -> build/lib/metawibele/characterize 2020-08-11T16:10:10,783 copying metawibele/characterize/finalize_annotation.py -> build/lib/metawibele/characterize 2020-08-11T16:10:10,789 copying metawibele/characterize/ddi_DOMINE_SIFTS.py -> build/lib/metawibele/characterize 2020-08-11T16:10:10,795 copying metawibele/characterize/ddi_DOMINE_ann.py -> build/lib/metawibele/characterize 2020-08-11T16:10:10,800 copying metawibele/characterize/psortb_protein_family.py -> build/lib/metawibele/characterize 2020-08-11T16:10:10,817 creating build/lib/metawibele/workflows 2020-08-11T16:10:10,819 copying metawibele/workflows/prioritize.py -> build/lib/metawibele/workflows 2020-08-11T16:10:10,825 copying metawibele/workflows/preprocess.py -> build/lib/metawibele/workflows 2020-08-11T16:10:10,831 copying metawibele/workflows/characterize.py -> build/lib/metawibele/workflows 2020-08-11T16:10:10,838 creating build/lib/metawibele/configs 2020-08-11T16:10:10,840 copying metawibele/configs/metawibele.cfg -> build/lib/metawibele/configs 2020-08-11T16:10:10,846 copying metawibele/configs/prioritization.cfg -> build/lib/metawibele/configs 2020-08-11T16:10:10,851 copying metawibele/configs/characterization.cfg -> build/lib/metawibele/configs 2020-08-11T16:10:10,856 copying metawibele/configs/MSPminer_setting.cfg -> build/lib/metawibele/configs 2020-08-11T16:10:10,861 creating build/lib/metawibele/data 2020-08-11T16:10:10,862 creating build/lib/metawibele/data/domain 2020-08-11T16:10:10,865 copying metawibele/data/domain/GTEx_sigmoid_transverse_colon.txt.gz -> build/lib/metawibele/data/domain 2020-08-11T16:10:10,888 copying metawibele/data/domain/pdb_chain_pfam.tsv.gz -> build/lib/metawibele/data/domain 2020-08-11T16:10:11,101 copying metawibele/data/domain/32_Uhlen_Lab_colon_rectum.txt.gz -> build/lib/metawibele/data/domain 2020-08-11T16:10:11,124 copying metawibele/data/domain/README.txt -> build/lib/metawibele/data/domain 2020-08-11T16:10:11,128 copying metawibele/data/domain/INTERACTION.txt.gz -> build/lib/metawibele/data/domain 2020-08-11T16:10:11,147 copying metawibele/data/domain/Encode_sigmoid_colon.txt.gz -> build/lib/metawibele/data/domain 2020-08-11T16:10:11,164 copying metawibele/data/domain/pdb_chain_taxonomy.tsv.gz -> build/lib/metawibele/data/domain 2020-08-11T16:10:13,704 copying metawibele/data/domain/pfam_descriptions.txt.gz -> build/lib/metawibele/data/domain 2020-08-11T16:10:13,729 copying metawibele/data/domain/gene_ontology.txt.gz -> build/lib/metawibele/data/domain 2020-08-11T16:10:13,743 copying metawibele/data/domain/Illumina_Body_Map_colon.txt.gz -> build/lib/metawibele/data/domain 2020-08-11T16:10:13,761 copying metawibele/data/domain/Human_proteome_map_colon_rectum.txt.gz -> build/lib/metawibele/data/domain 2020-08-11T16:10:13,775 copying metawibele/data/domain/FANTOM5_colon_rectum.txt.gz -> build/lib/metawibele/data/domain 2020-08-11T16:10:13,794 copying metawibele/data/domain/Human_protein_Atlas_colon_rectum.txt.gz -> build/lib/metawibele/data/domain 2020-08-11T16:10:13,803 creating build/lib/metawibele/data/uniref 2020-08-11T16:10:13,805 copying metawibele/data/uniref/uniprot_taxonomy.tsv.gz -> build/lib/metawibele/data/uniref 2020-08-11T16:10:17,887 copying metawibele/data/uniref/README.txt -> build/lib/metawibele/data/uniref 2020-08-11T16:10:17,892 copying metawibele/data/uniref/uniprot_human_pfam.tsv.gz -> build/lib/metawibele/data/uniref 2020-08-11T16:10:18,101 copying metawibele/data/uniref/uniprot_taxaID_microbiome.txt.gz -> build/lib/metawibele/data/uniref 2020-08-11T16:10:18,330 copying metawibele/data/uniref/uniprot_taxaID_mammalia.txt.gz -> build/lib/metawibele/data/uniref 2020-08-11T16:10:18,340 creating build/lib/metawibele/data/misc 2020-08-11T16:10:18,342 copying metawibele/data/misc/vignette_function.tsv -> build/lib/metawibele/data/misc 2020-08-11T16:10:18,348 creating build/lib/metawibele/Rscripts 2020-08-11T16:10:18,351 copying metawibele/Rscripts/pcl_utils.R -> build/lib/metawibele/Rscripts 2020-08-11T16:10:18,362 copying metawibele/Rscripts/maaslin2_utils.R -> build/lib/metawibele/Rscripts 2020-08-11T16:10:18,382 running build_scripts 2020-08-11T16:10:18,383 creating build/scripts-3.7 2020-08-11T16:10:18,386 copying and adjusting metawibele/workflows/prioritize.py -> build/scripts-3.7 2020-08-11T16:10:18,392 copying and adjusting metawibele/workflows/preprocess.py -> build/scripts-3.7 2020-08-11T16:10:18,397 copying and adjusting metawibele/workflows/characterize.py -> build/scripts-3.7 2020-08-11T16:10:18,401 changing mode of build/scripts-3.7/prioritize.py from 644 to 755 2020-08-11T16:10:18,402 changing mode of build/scripts-3.7/preprocess.py from 644 to 755 2020-08-11T16:10:18,403 changing mode of build/scripts-3.7/characterize.py from 644 to 755 2020-08-11T16:10:18,404 installing to build/bdist.linux-armv7l/wheel 2020-08-11T16:10:18,405 running install 2020-08-11T16:10:18,406 running install_lib 2020-08-11T16:10:18,413 creating build/bdist.linux-armv7l 2020-08-11T16:10:18,414 creating build/bdist.linux-armv7l/wheel 2020-08-11T16:10:18,418 creating build/bdist.linux-armv7l/wheel/metawibele 2020-08-11T16:10:18,422 creating build/bdist.linux-armv7l/wheel/metawibele/tasks 2020-08-11T16:10:18,424 copying build/lib/metawibele/tasks/__init__.py -> build/bdist.linux-armv7l/wheel/metawibele/tasks 2020-08-11T16:10:18,428 copying build/lib/metawibele/tasks/prioritization.py -> build/bdist.linux-armv7l/wheel/metawibele/tasks 2020-08-11T16:10:18,433 copying build/lib/metawibele/tasks/characterization.py -> build/bdist.linux-armv7l/wheel/metawibele/tasks 2020-08-11T16:10:18,445 copying build/lib/metawibele/__init__.py -> build/bdist.linux-armv7l/wheel/metawibele 2020-08-11T16:10:18,448 copying build/lib/metawibele/utilities.py -> build/bdist.linux-armv7l/wheel/metawibele 2020-08-11T16:10:18,455 copying build/lib/metawibele/check.py -> build/bdist.linux-armv7l/wheel/metawibele 2020-08-11T16:10:18,459 copying build/lib/metawibele/metawibele.py -> build/bdist.linux-armv7l/wheel/metawibele 2020-08-11T16:10:18,466 creating build/bdist.linux-armv7l/wheel/metawibele/common 2020-08-11T16:10:18,468 copying build/lib/metawibele/common/combine_abundance_annotation.py -> build/bdist.linux-armv7l/wheel/metawibele/common 2020-08-11T16:10:18,473 copying build/lib/metawibele/common/join_family_abundance.py -> build/bdist.linux-armv7l/wheel/metawibele/common 2020-08-11T16:10:18,478 copying build/lib/metawibele/common/download_database.py -> build/bdist.linux-armv7l/wheel/metawibele/common 2020-08-11T16:10:18,483 copying build/lib/metawibele/common/abundance_smoothing.py -> build/bdist.linux-armv7l/wheel/metawibele/common 2020-08-11T16:10:18,488 copying build/lib/metawibele/common/__init__.py -> build/bdist.linux-armv7l/wheel/metawibele/common 2020-08-11T16:10:18,491 copying build/lib/metawibele/common/prepare_uniprot_annotation.py -> build/bdist.linux-armv7l/wheel/metawibele/common 2020-08-11T16:10:18,497 copying build/lib/metawibele/common/utils.py -> build/bdist.linux-armv7l/wheel/metawibele/common 2020-08-11T16:10:18,502 copying build/lib/metawibele/common/extract_abundance_feature_subset.py -> build/bdist.linux-armv7l/wheel/metawibele/common 2020-08-11T16:10:18,507 copying build/lib/metawibele/common/extract_abundance_sample_subset.py -> build/bdist.linux-armv7l/wheel/metawibele/common 2020-08-11T16:10:18,511 copying build/lib/metawibele/common/filter_prevalence.py -> build/bdist.linux-armv7l/wheel/metawibele/common 2020-08-11T16:10:18,515 copying build/lib/metawibele/common/extract_uniprot_pfam.py -> build/bdist.linux-armv7l/wheel/metawibele/common 2020-08-11T16:10:18,521 copying build/lib/metawibele/common/filter_clusters.py -> build/bdist.linux-armv7l/wheel/metawibele/common 2020-08-11T16:10:18,526 copying build/lib/metawibele/common/prepare_domain_databases.py -> build/bdist.linux-armv7l/wheel/metawibele/common 2020-08-11T16:10:18,531 copying build/lib/metawibele/common/transpose.py -> build/bdist.linux-armv7l/wheel/metawibele/common 2020-08-11T16:10:18,535 copying build/lib/metawibele/common/prepare_uniprot_taxonomy.py -> build/bdist.linux-armv7l/wheel/metawibele/common 2020-08-11T16:10:18,540 copying build/lib/metawibele/common/prepare_uniref_annotation.py -> build/bdist.linux-armv7l/wheel/metawibele/common 2020-08-11T16:10:18,546 copying build/lib/metawibele/common/abundance_RPK.py -> build/bdist.linux-armv7l/wheel/metawibele/common 2020-08-11T16:10:18,551 copying build/lib/metawibele/common/download_config_file.py -> build/bdist.linux-armv7l/wheel/metawibele/common 2020-08-11T16:10:18,555 copying build/lib/metawibele/common/abundance_filtering.py -> build/bdist.linux-armv7l/wheel/metawibele/common 2020-08-11T16:10:18,560 copying build/lib/metawibele/common/split_family_abundance.py -> build/bdist.linux-armv7l/wheel/metawibele/common 2020-08-11T16:10:18,565 copying build/lib/metawibele/common/abundance_normalization.py -> build/bdist.linux-armv7l/wheel/metawibele/common 2020-08-11T16:10:18,569 copying build/lib/metawibele/common/split_fasta_file.py -> build/bdist.linux-armv7l/wheel/metawibele/common 2020-08-11T16:10:18,575 creating build/bdist.linux-armv7l/wheel/metawibele/data 2020-08-11T16:10:18,579 creating build/bdist.linux-armv7l/wheel/metawibele/data/domain 2020-08-11T16:10:18,581 copying build/lib/metawibele/data/domain/GTEx_sigmoid_transverse_colon.txt.gz -> build/bdist.linux-armv7l/wheel/metawibele/data/domain 2020-08-11T16:10:18,603 copying build/lib/metawibele/data/domain/pdb_chain_pfam.tsv.gz -> build/bdist.linux-armv7l/wheel/metawibele/data/domain 2020-08-11T16:10:18,816 copying build/lib/metawibele/data/domain/32_Uhlen_Lab_colon_rectum.txt.gz -> build/bdist.linux-armv7l/wheel/metawibele/data/domain 2020-08-11T16:10:18,838 copying build/lib/metawibele/data/domain/README.txt -> build/bdist.linux-armv7l/wheel/metawibele/data/domain 2020-08-11T16:10:18,842 copying build/lib/metawibele/data/domain/INTERACTION.txt.gz -> build/bdist.linux-armv7l/wheel/metawibele/data/domain 2020-08-11T16:10:18,859 copying build/lib/metawibele/data/domain/Encode_sigmoid_colon.txt.gz -> build/bdist.linux-armv7l/wheel/metawibele/data/domain 2020-08-11T16:10:18,875 copying build/lib/metawibele/data/domain/pdb_chain_taxonomy.tsv.gz -> build/bdist.linux-armv7l/wheel/metawibele/data/domain 2020-08-11T16:10:21,414 copying build/lib/metawibele/data/domain/pfam_descriptions.txt.gz -> build/bdist.linux-armv7l/wheel/metawibele/data/domain 2020-08-11T16:10:21,440 copying build/lib/metawibele/data/domain/gene_ontology.txt.gz -> build/bdist.linux-armv7l/wheel/metawibele/data/domain 2020-08-11T16:10:21,454 copying build/lib/metawibele/data/domain/Illumina_Body_Map_colon.txt.gz -> build/bdist.linux-armv7l/wheel/metawibele/data/domain 2020-08-11T16:10:21,472 copying build/lib/metawibele/data/domain/Human_proteome_map_colon_rectum.txt.gz -> build/bdist.linux-armv7l/wheel/metawibele/data/domain 2020-08-11T16:10:21,486 copying build/lib/metawibele/data/domain/FANTOM5_colon_rectum.txt.gz -> build/bdist.linux-armv7l/wheel/metawibele/data/domain 2020-08-11T16:10:21,505 copying build/lib/metawibele/data/domain/Human_protein_Atlas_colon_rectum.txt.gz -> build/bdist.linux-armv7l/wheel/metawibele/data/domain 2020-08-11T16:10:21,515 creating build/bdist.linux-armv7l/wheel/metawibele/data/misc 2020-08-11T16:10:21,517 copying build/lib/metawibele/data/misc/vignette_function.tsv -> build/bdist.linux-armv7l/wheel/metawibele/data/misc 2020-08-11T16:10:21,525 creating build/bdist.linux-armv7l/wheel/metawibele/data/uniref 2020-08-11T16:10:21,527 copying build/lib/metawibele/data/uniref/uniprot_taxonomy.tsv.gz -> build/bdist.linux-armv7l/wheel/metawibele/data/uniref 2020-08-11T16:10:25,605 copying build/lib/metawibele/data/uniref/README.txt -> build/bdist.linux-armv7l/wheel/metawibele/data/uniref 2020-08-11T16:10:25,609 copying build/lib/metawibele/data/uniref/uniprot_human_pfam.tsv.gz -> build/bdist.linux-armv7l/wheel/metawibele/data/uniref 2020-08-11T16:10:25,817 copying build/lib/metawibele/data/uniref/uniprot_taxaID_microbiome.txt.gz -> build/bdist.linux-armv7l/wheel/metawibele/data/uniref 2020-08-11T16:10:26,164 copying build/lib/metawibele/data/uniref/uniprot_taxaID_mammalia.txt.gz -> build/bdist.linux-armv7l/wheel/metawibele/data/uniref 2020-08-11T16:10:26,173 creating build/bdist.linux-armv7l/wheel/metawibele/tools 2020-08-11T16:10:26,175 copying build/lib/metawibele/tools/__init__.py -> build/bdist.linux-armv7l/wheel/metawibele/tools 2020-08-11T16:10:26,179 copying build/lib/metawibele/tools/extract_cluster_CD_hit.py -> build/bdist.linux-armv7l/wheel/metawibele/tools 2020-08-11T16:10:26,184 copying build/lib/metawibele/tools/gene_abundance_indexRef.py -> build/bdist.linux-armv7l/wheel/metawibele/tools 2020-08-11T16:10:26,188 copying build/lib/metawibele/tools/extract_protein_coding_genes.py -> build/bdist.linux-armv7l/wheel/metawibele/tools 2020-08-11T16:10:26,193 copying build/lib/metawibele/tools/extract_non_redundance_seq.py -> build/bdist.linux-armv7l/wheel/metawibele/tools 2020-08-11T16:10:26,197 copying build/lib/metawibele/tools/gene_abundance.py -> build/bdist.linux-armv7l/wheel/metawibele/tools 2020-08-11T16:10:26,202 copying build/lib/metawibele/tools/combine_gene_sequences.py -> build/bdist.linux-armv7l/wheel/metawibele/tools 2020-08-11T16:10:26,207 copying build/lib/metawibele/tools/format_protein_sequences.py -> build/bdist.linux-armv7l/wheel/metawibele/tools 2020-08-11T16:10:26,213 copying build/lib/metawibele/tools/gene_catalog_abundance.py -> build/bdist.linux-armv7l/wheel/metawibele/tools 2020-08-11T16:10:26,218 copying build/lib/metawibele/tools/preprocessing_tasks.py -> build/bdist.linux-armv7l/wheel/metawibele/tools 2020-08-11T16:10:26,225 copying build/lib/metawibele/tools/extract_complete_ORF_seq.py -> build/bdist.linux-armv7l/wheel/metawibele/tools 2020-08-11T16:10:26,229 copying build/lib/metawibele/tools/format_contig_sequences.py -> build/bdist.linux-armv7l/wheel/metawibele/tools 2020-08-11T16:10:26,235 creating build/bdist.linux-armv7l/wheel/metawibele/prioritize 2020-08-11T16:10:26,237 copying build/lib/metawibele/prioritize/__init__.py -> build/bdist.linux-armv7l/wheel/metawibele/prioritize 2020-08-11T16:10:26,241 copying build/lib/metawibele/prioritize/quantify_prioritization.py -> build/bdist.linux-armv7l/wheel/metawibele/prioritize 2020-08-11T16:10:26,247 copying build/lib/metawibele/prioritize/finalize_prioritization.py -> build/bdist.linux-armv7l/wheel/metawibele/prioritize 2020-08-11T16:10:26,252 copying build/lib/metawibele/prioritize/filter_prioritization.py -> build/bdist.linux-armv7l/wheel/metawibele/prioritize 2020-08-11T16:10:26,259 creating build/bdist.linux-armv7l/wheel/metawibele/configs 2020-08-11T16:10:26,261 copying build/lib/metawibele/configs/metawibele.cfg -> build/bdist.linux-armv7l/wheel/metawibele/configs 2020-08-11T16:10:26,266 copying build/lib/metawibele/configs/prioritization.cfg -> build/bdist.linux-armv7l/wheel/metawibele/configs 2020-08-11T16:10:26,271 copying build/lib/metawibele/configs/characterization.cfg -> build/bdist.linux-armv7l/wheel/metawibele/configs 2020-08-11T16:10:26,275 copying build/lib/metawibele/configs/MSPminer_setting.cfg -> build/bdist.linux-armv7l/wheel/metawibele/configs 2020-08-11T16:10:26,280 creating build/bdist.linux-armv7l/wheel/metawibele/Rscripts 2020-08-11T16:10:26,282 copying build/lib/metawibele/Rscripts/pcl_utils.R -> build/bdist.linux-armv7l/wheel/metawibele/Rscripts 2020-08-11T16:10:26,292 copying build/lib/metawibele/Rscripts/maaslin2_utils.R -> build/bdist.linux-armv7l/wheel/metawibele/Rscripts 2020-08-11T16:10:26,298 creating build/bdist.linux-armv7l/wheel/metawibele/workflows 2020-08-11T16:10:26,300 copying build/lib/metawibele/workflows/prioritize.py -> build/bdist.linux-armv7l/wheel/metawibele/workflows 2020-08-11T16:10:26,306 copying build/lib/metawibele/workflows/preprocess.py -> build/bdist.linux-armv7l/wheel/metawibele/workflows 2020-08-11T16:10:26,311 copying build/lib/metawibele/workflows/characterize.py -> build/bdist.linux-armv7l/wheel/metawibele/workflows 2020-08-11T16:10:26,320 creating build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-08-11T16:10:26,322 copying build/lib/metawibele/characterize/maaslin2_annotator.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-08-11T16:10:26,328 copying build/lib/metawibele/characterize/__init__.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-08-11T16:10:26,331 copying build/lib/metawibele/characterize/summary_function_annotation.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-08-11T16:10:26,338 copying build/lib/metawibele/characterize/utils.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-08-11T16:10:26,343 copying build/lib/metawibele/characterize/uniref_annotator.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-08-11T16:10:26,349 copying build/lib/metawibele/characterize/ddi_DOMINE_ExpAtlas.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-08-11T16:10:26,355 copying build/lib/metawibele/characterize/interproscan_signalp_protein_family.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-08-11T16:10:26,360 copying build/lib/metawibele/characterize/mspminer_protein_family_taxonomy.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-08-11T16:10:26,366 copying build/lib/metawibele/characterize/summary_protein_family_uniref_annotation.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-08-11T16:10:26,373 copying build/lib/metawibele/characterize/summary_all_annotation.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-08-11T16:10:26,378 copying build/lib/metawibele/characterize/interproscan_protein.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-08-11T16:10:26,384 copying build/lib/metawibele/characterize/metadata_format.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-08-11T16:10:26,388 copying build/lib/metawibele/characterize/uniref_annotator_stat.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-08-11T16:10:26,394 copying build/lib/metawibele/characterize/interproscan_tmhmm_protein_family.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-08-11T16:10:26,399 copying build/lib/metawibele/characterize/maaslin2.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-08-11T16:10:26,405 copying build/lib/metawibele/characterize/mspminer_protein.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-08-11T16:10:26,410 copying build/lib/metawibele/characterize/pfam2go.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-08-11T16:10:26,415 copying build/lib/metawibele/characterize/interproscan_annotator.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-08-11T16:10:26,420 copying build/lib/metawibele/characterize/maaslin2_summary.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-08-11T16:10:26,426 copying build/lib/metawibele/characterize/psortb_protein.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-08-11T16:10:26,432 copying build/lib/metawibele/characterize/psortb_annotator.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-08-11T16:10:26,436 copying build/lib/metawibele/characterize/mspminer_protein_family.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-08-11T16:10:26,443 copying build/lib/metawibele/characterize/abundance_annotator.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-08-11T16:10:26,448 copying build/lib/metawibele/characterize/mspminer_msp.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-08-11T16:10:26,454 copying build/lib/metawibele/characterize/mspminer_msp_uniref_annotation.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-08-11T16:10:26,459 copying build/lib/metawibele/characterize/interproscan_protein_family.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-08-11T16:10:26,464 copying build/lib/metawibele/characterize/maaslin2_collection.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-08-11T16:10:26,471 copying build/lib/metawibele/characterize/interproscan_pfam_protein_family.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-08-11T16:10:26,477 copying build/lib/metawibele/characterize/msp_protein_family.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-08-11T16:10:26,482 copying build/lib/metawibele/characterize/ddi_DOMINE_protein_family.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-08-11T16:10:26,488 copying build/lib/metawibele/characterize/denovo_TM_SP.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-08-11T16:10:26,494 copying build/lib/metawibele/characterize/interproscan_phobius_protein_family.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-08-11T16:10:26,499 copying build/lib/metawibele/characterize/sum_to_protein_family_abundance.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-08-11T16:10:26,504 copying build/lib/metawibele/characterize/uniref_protein_family.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-08-11T16:10:26,511 copying build/lib/metawibele/characterize/uniref_protein.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-08-11T16:10:26,516 copying build/lib/metawibele/characterize/mspminer_msp_taxonomy_annotation.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-08-11T16:10:26,522 copying build/lib/metawibele/characterize/ddi_DOMINE_protein.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-08-11T16:10:26,527 copying build/lib/metawibele/characterize/summary_protein_uniref_annotation.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-08-11T16:10:26,534 copying build/lib/metawibele/characterize/finalize_annotation.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-08-11T16:10:26,540 copying build/lib/metawibele/characterize/ddi_DOMINE_SIFTS.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-08-11T16:10:26,545 copying build/lib/metawibele/characterize/ddi_DOMINE_ann.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-08-11T16:10:26,551 copying build/lib/metawibele/characterize/psortb_protein_family.py -> build/bdist.linux-armv7l/wheel/metawibele/characterize 2020-08-11T16:10:26,557 copying build/lib/metawibele/config.py -> build/bdist.linux-armv7l/wheel/metawibele 2020-08-11T16:10:26,563 running install_egg_info 2020-08-11T16:10:26,594 running egg_info 2020-08-11T16:10:26,595 writing metawibele.egg-info/PKG-INFO 2020-08-11T16:10:26,599 writing dependency_links to metawibele.egg-info/dependency_links.txt 2020-08-11T16:10:26,607 writing entry points to metawibele.egg-info/entry_points.txt 2020-08-11T16:10:26,612 writing top-level names to metawibele.egg-info/top_level.txt 2020-08-11T16:10:26,680 reading manifest file 'metawibele.egg-info/SOURCES.txt' 2020-08-11T16:10:26,695 reading manifest template 'MANIFEST.in' 2020-08-11T16:10:26,697 warning: no files found matching 'readme.md' 2020-08-11T16:10:26,740 writing manifest file 'metawibele.egg-info/SOURCES.txt' 2020-08-11T16:10:26,744 Copying metawibele.egg-info to build/bdist.linux-armv7l/wheel/metawibele-0.3.7-py3.7.egg-info 2020-08-11T16:10:26,775 running install_scripts 2020-08-11T16:10:26,824 creating build/bdist.linux-armv7l/wheel/metawibele-0.3.7.data 2020-08-11T16:10:26,825 creating build/bdist.linux-armv7l/wheel/metawibele-0.3.7.data/scripts 2020-08-11T16:10:26,828 copying build/scripts-3.7/prioritize.py -> build/bdist.linux-armv7l/wheel/metawibele-0.3.7.data/scripts 2020-08-11T16:10:26,833 copying build/scripts-3.7/preprocess.py -> build/bdist.linux-armv7l/wheel/metawibele-0.3.7.data/scripts 2020-08-11T16:10:26,839 copying build/scripts-3.7/characterize.py -> build/bdist.linux-armv7l/wheel/metawibele-0.3.7.data/scripts 2020-08-11T16:10:26,844 changing mode of build/bdist.linux-armv7l/wheel/metawibele-0.3.7.data/scripts/prioritize.py to 755 2020-08-11T16:10:26,845 changing mode of build/bdist.linux-armv7l/wheel/metawibele-0.3.7.data/scripts/preprocess.py to 755 2020-08-11T16:10:26,845 changing mode of build/bdist.linux-armv7l/wheel/metawibele-0.3.7.data/scripts/characterize.py to 755 2020-08-11T16:10:26,881 adding license file "LICENSE" (matched pattern "LICEN[CS]E*") 2020-08-11T16:10:26,894 creating build/bdist.linux-armv7l/wheel/metawibele-0.3.7.dist-info/WHEEL 2020-08-11T16:10:26,899 creating '/tmp/pip-wheel-209f2bd2/metawibele-0.3.7-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2020-08-11T16:10:26,904 adding 'metawibele/__init__.py' 2020-08-11T16:10:26,907 adding 'metawibele/check.py' 2020-08-11T16:10:26,912 adding 'metawibele/config.py' 2020-08-11T16:10:26,915 adding 'metawibele/metawibele.py' 2020-08-11T16:10:26,922 adding 'metawibele/utilities.py' 2020-08-11T16:10:26,926 adding 'metawibele/Rscripts/maaslin2_utils.R' 2020-08-11T16:10:26,937 adding 'metawibele/Rscripts/pcl_utils.R' 2020-08-11T16:10:26,943 adding 'metawibele/characterize/__init__.py' 2020-08-11T16:10:26,946 adding 'metawibele/characterize/abundance_annotator.py' 2020-08-11T16:10:26,950 adding 'metawibele/characterize/ddi_DOMINE_ExpAtlas.py' 2020-08-11T16:10:26,954 adding 'metawibele/characterize/ddi_DOMINE_SIFTS.py' 2020-08-11T16:10:26,957 adding 'metawibele/characterize/ddi_DOMINE_ann.py' 2020-08-11T16:10:26,961 adding 'metawibele/characterize/ddi_DOMINE_protein.py' 2020-08-11T16:10:26,965 adding 'metawibele/characterize/ddi_DOMINE_protein_family.py' 2020-08-11T16:10:26,968 adding 'metawibele/characterize/denovo_TM_SP.py' 2020-08-11T16:10:26,973 adding 'metawibele/characterize/finalize_annotation.py' 2020-08-11T16:10:26,976 adding 'metawibele/characterize/interproscan_annotator.py' 2020-08-11T16:10:26,979 adding 'metawibele/characterize/interproscan_pfam_protein_family.py' 2020-08-11T16:10:26,983 adding 'metawibele/characterize/interproscan_phobius_protein_family.py' 2020-08-11T16:10:26,986 adding 'metawibele/characterize/interproscan_protein.py' 2020-08-11T16:10:26,990 adding 'metawibele/characterize/interproscan_protein_family.py' 2020-08-11T16:10:26,994 adding 'metawibele/characterize/interproscan_signalp_protein_family.py' 2020-08-11T16:10:26,997 adding 'metawibele/characterize/interproscan_tmhmm_protein_family.py' 2020-08-11T16:10:27,001 adding 'metawibele/characterize/maaslin2.py' 2020-08-11T16:10:27,004 adding 'metawibele/characterize/maaslin2_annotator.py' 2020-08-11T16:10:27,009 adding 'metawibele/characterize/maaslin2_collection.py' 2020-08-11T16:10:27,013 adding 'metawibele/characterize/maaslin2_summary.py' 2020-08-11T16:10:27,016 adding 'metawibele/characterize/metadata_format.py' 2020-08-11T16:10:27,019 adding 'metawibele/characterize/msp_protein_family.py' 2020-08-11T16:10:27,022 adding 'metawibele/characterize/mspminer_msp.py' 2020-08-11T16:10:27,026 adding 'metawibele/characterize/mspminer_msp_taxonomy_annotation.py' 2020-08-11T16:10:27,029 adding 'metawibele/characterize/mspminer_msp_uniref_annotation.py' 2020-08-11T16:10:27,033 adding 'metawibele/characterize/mspminer_protein.py' 2020-08-11T16:10:27,037 adding 'metawibele/characterize/mspminer_protein_family.py' 2020-08-11T16:10:27,042 adding 'metawibele/characterize/mspminer_protein_family_taxonomy.py' 2020-08-11T16:10:27,045 adding 'metawibele/characterize/pfam2go.py' 2020-08-11T16:10:27,048 adding 'metawibele/characterize/psortb_annotator.py' 2020-08-11T16:10:27,051 adding 'metawibele/characterize/psortb_protein.py' 2020-08-11T16:10:27,055 adding 'metawibele/characterize/psortb_protein_family.py' 2020-08-11T16:10:27,058 adding 'metawibele/characterize/sum_to_protein_family_abundance.py' 2020-08-11T16:10:27,062 adding 'metawibele/characterize/summary_all_annotation.py' 2020-08-11T16:10:27,066 adding 'metawibele/characterize/summary_function_annotation.py' 2020-08-11T16:10:27,071 adding 'metawibele/characterize/summary_protein_family_uniref_annotation.py' 2020-08-11T16:10:27,076 adding 'metawibele/characterize/summary_protein_uniref_annotation.py' 2020-08-11T16:10:27,080 adding 'metawibele/characterize/uniref_annotator.py' 2020-08-11T16:10:27,083 adding 'metawibele/characterize/uniref_annotator_stat.py' 2020-08-11T16:10:27,087 adding 'metawibele/characterize/uniref_protein.py' 2020-08-11T16:10:27,092 adding 'metawibele/characterize/uniref_protein_family.py' 2020-08-11T16:10:27,095 adding 'metawibele/characterize/utils.py' 2020-08-11T16:10:27,100 adding 'metawibele/common/__init__.py' 2020-08-11T16:10:27,103 adding 'metawibele/common/abundance_RPK.py' 2020-08-11T16:10:27,106 adding 'metawibele/common/abundance_filtering.py' 2020-08-11T16:10:27,109 adding 'metawibele/common/abundance_normalization.py' 2020-08-11T16:10:27,112 adding 'metawibele/common/abundance_smoothing.py' 2020-08-11T16:10:27,115 adding 'metawibele/common/combine_abundance_annotation.py' 2020-08-11T16:10:27,118 adding 'metawibele/common/download_config_file.py' 2020-08-11T16:10:27,121 adding 'metawibele/common/download_database.py' 2020-08-11T16:10:27,123 adding 'metawibele/common/extract_abundance_feature_subset.py' 2020-08-11T16:10:27,127 adding 'metawibele/common/extract_abundance_sample_subset.py' 2020-08-11T16:10:27,129 adding 'metawibele/common/extract_uniprot_pfam.py' 2020-08-11T16:10:27,132 adding 'metawibele/common/filter_clusters.py' 2020-08-11T16:10:27,135 adding 'metawibele/common/filter_prevalence.py' 2020-08-11T16:10:27,138 adding 'metawibele/common/join_family_abundance.py' 2020-08-11T16:10:27,140 adding 'metawibele/common/prepare_domain_databases.py' 2020-08-11T16:10:27,144 adding 'metawibele/common/prepare_uniprot_annotation.py' 2020-08-11T16:10:27,147 adding 'metawibele/common/prepare_uniprot_taxonomy.py' 2020-08-11T16:10:27,151 adding 'metawibele/common/prepare_uniref_annotation.py' 2020-08-11T16:10:27,154 adding 'metawibele/common/split_family_abundance.py' 2020-08-11T16:10:27,157 adding 'metawibele/common/split_fasta_file.py' 2020-08-11T16:10:27,160 adding 'metawibele/common/transpose.py' 2020-08-11T16:10:27,164 adding 'metawibele/common/utils.py' 2020-08-11T16:10:27,167 adding 'metawibele/configs/MSPminer_setting.cfg' 2020-08-11T16:10:27,170 adding 'metawibele/configs/characterization.cfg' 2020-08-11T16:10:27,173 adding 'metawibele/configs/metawibele.cfg' 2020-08-11T16:10:27,175 adding 'metawibele/configs/prioritization.cfg' 2020-08-11T16:10:27,214 adding 'metawibele/data/domain/32_Uhlen_Lab_colon_rectum.txt.gz' 2020-08-11T16:10:27,239 adding 'metawibele/data/domain/Encode_sigmoid_colon.txt.gz' 2020-08-11T16:10:27,269 adding 'metawibele/data/domain/FANTOM5_colon_rectum.txt.gz' 2020-08-11T16:10:27,304 adding 'metawibele/data/domain/GTEx_sigmoid_transverse_colon.txt.gz' 2020-08-11T16:10:27,314 adding 'metawibele/data/domain/Human_protein_Atlas_colon_rectum.txt.gz' 2020-08-11T16:10:27,331 adding 'metawibele/data/domain/Human_proteome_map_colon_rectum.txt.gz' 2020-08-11T16:10:27,362 adding 'metawibele/data/domain/INTERACTION.txt.gz' 2020-08-11T16:10:27,389 adding 'metawibele/data/domain/Illumina_Body_Map_colon.txt.gz' 2020-08-11T16:10:27,393 adding 'metawibele/data/domain/README.txt' 2020-08-11T16:10:27,412 adding 'metawibele/data/domain/gene_ontology.txt.gz' 2020-08-11T16:10:27,855 adding 'metawibele/data/domain/pdb_chain_pfam.tsv.gz' 2020-08-11T16:10:32,766 adding 'metawibele/data/domain/pdb_chain_taxonomy.tsv.gz' 2020-08-11T16:10:33,141 adding 'metawibele/data/domain/pfam_descriptions.txt.gz' 2020-08-11T16:10:33,147 adding 'metawibele/data/misc/vignette_function.tsv' 2020-08-11T16:10:33,151 adding 'metawibele/data/uniref/README.txt' 2020-08-11T16:10:33,557 adding 'metawibele/data/uniref/uniprot_human_pfam.tsv.gz' 2020-08-11T16:10:33,590 adding 'metawibele/data/uniref/uniprot_taxaID_mammalia.txt.gz' 2020-08-11T16:10:33,904 adding 'metawibele/data/uniref/uniprot_taxaID_microbiome.txt.gz' 2020-08-11T16:10:42,885 adding 'metawibele/data/uniref/uniprot_taxonomy.tsv.gz' 2020-08-11T16:10:43,423 adding 'metawibele/prioritize/__init__.py' 2020-08-11T16:10:43,427 adding 'metawibele/prioritize/filter_prioritization.py' 2020-08-11T16:10:43,430 adding 'metawibele/prioritize/finalize_prioritization.py' 2020-08-11T16:10:43,436 adding 'metawibele/prioritize/quantify_prioritization.py' 2020-08-11T16:10:43,441 adding 'metawibele/tasks/__init__.py' 2020-08-11T16:10:43,452 adding 'metawibele/tasks/characterization.py' 2020-08-11T16:10:43,457 adding 'metawibele/tasks/prioritization.py' 2020-08-11T16:10:43,461 adding 'metawibele/tools/__init__.py' 2020-08-11T16:10:43,465 adding 'metawibele/tools/combine_gene_sequences.py' 2020-08-11T16:10:43,468 adding 'metawibele/tools/extract_cluster_CD_hit.py' 2020-08-11T16:10:43,472 adding 'metawibele/tools/extract_complete_ORF_seq.py' 2020-08-11T16:10:43,475 adding 'metawibele/tools/extract_non_redundance_seq.py' 2020-08-11T16:10:43,479 adding 'metawibele/tools/extract_protein_coding_genes.py' 2020-08-11T16:10:43,482 adding 'metawibele/tools/format_contig_sequences.py' 2020-08-11T16:10:43,488 adding 'metawibele/tools/format_protein_sequences.py' 2020-08-11T16:10:43,492 adding 'metawibele/tools/gene_abundance.py' 2020-08-11T16:10:43,495 adding 'metawibele/tools/gene_abundance_indexRef.py' 2020-08-11T16:10:43,499 adding 'metawibele/tools/gene_catalog_abundance.py' 2020-08-11T16:10:43,505 adding 'metawibele/tools/preprocessing_tasks.py' 2020-08-11T16:10:43,511 adding 'metawibele/workflows/characterize.py' 2020-08-11T16:10:43,515 adding 'metawibele/workflows/preprocess.py' 2020-08-11T16:10:43,519 adding 'metawibele/workflows/prioritize.py' 2020-08-11T16:10:43,526 adding 'metawibele-0.3.7.data/scripts/characterize.py' 2020-08-11T16:10:43,530 adding 'metawibele-0.3.7.data/scripts/preprocess.py' 2020-08-11T16:10:43,533 adding 'metawibele-0.3.7.data/scripts/prioritize.py' 2020-08-11T16:10:43,538 adding 'metawibele-0.3.7.dist-info/LICENSE' 2020-08-11T16:10:43,541 adding 'metawibele-0.3.7.dist-info/METADATA' 2020-08-11T16:10:43,543 adding 'metawibele-0.3.7.dist-info/WHEEL' 2020-08-11T16:10:43,545 adding 'metawibele-0.3.7.dist-info/entry_points.txt' 2020-08-11T16:10:43,547 adding 'metawibele-0.3.7.dist-info/top_level.txt' 2020-08-11T16:10:43,550 adding 'metawibele-0.3.7.dist-info/RECORD' 2020-08-11T16:10:49,848 removing build/bdist.linux-armv7l/wheel 2020-08-11T16:10:50,098 Building wheel for metawibele (setup.py): finished with status 'done' 2020-08-11T16:10:51,137 Created wheel for metawibele: filename=metawibele-0.3.7-py3-none-any.whl size=72576223 sha256=b56669f31a78a05ed5401ac62e468a48e63ecc63dc4931cf2a55c3b6987a50ad 2020-08-11T16:10:51,137 Stored in directory: /tmp/pip-ephem-wheel-cache-zg8izu_a/wheels/07/61/2a/f7b04726c73589d958576f6ea3001a5da72531c3c7d7446dbd 2020-08-11T16:10:51,141 Successfully built metawibele 2020-08-11T16:11:03,957 Removed build tracker: '/tmp/pip-req-tracker-mzzlsvdg'