2020-08-16T14:13:25,038 Created temporary directory: /tmp/pip-ephem-wheel-cache-3sa33r0j
2020-08-16T14:13:25,045 Created temporary directory: /tmp/pip-req-tracker-cod746cn
2020-08-16T14:13:25,046 Initialized build tracking at /tmp/pip-req-tracker-cod746cn
2020-08-16T14:13:25,046 Created build tracker: /tmp/pip-req-tracker-cod746cn
2020-08-16T14:13:25,047 Entered build tracker: /tmp/pip-req-tracker-cod746cn
2020-08-16T14:13:25,048 Created temporary directory: /tmp/pip-wheel-q580jxq0
2020-08-16T14:13:25,065 1 location(s) to search for versions of scipion-em-relion:
2020-08-16T14:13:25,065 * https://pypi.org/simple/scipion-em-relion/
2020-08-16T14:13:25,066 Fetching project page and analyzing links: https://pypi.org/simple/scipion-em-relion/
2020-08-16T14:13:25,068 Getting page https://pypi.org/simple/scipion-em-relion/
2020-08-16T14:13:25,073 Found index url https://pypi.org/simple
2020-08-16T14:13:25,411   Found link https://files.pythonhosted.org/packages/05/a2/d5f1ffa8537f36f40b34263047919ae34baccbe64147bc68cc6c3f8777d9/scipion-em-relion-1.0.0.tar.gz#sha256=b12f8f634114a7e3cb0b33d7f6204bc47b8b5bb3815d3855feedbada752368fb (from https://pypi.org/simple/scipion-em-relion/), version: 1.0.0
2020-08-16T14:13:25,412   Found link https://files.pythonhosted.org/packages/48/4b/02aa5c517d8e6db7aa85d26b76f016841c9e34d58e21e04fa23423a9ef06/scipion-em-relion-1.0.1.tar.gz#sha256=6d7d065852276760640e5c6cb90a35fa93e7096556cdd591d015085c4b3a2792 (from https://pypi.org/simple/scipion-em-relion/), version: 1.0.1
2020-08-16T14:13:25,414   Found link https://files.pythonhosted.org/packages/55/7b/90403e2f937a52301e27955b49665b462df0c4ab02da6444c01f3543ae42/scipion-em-relion-1.0.2.tar.gz#sha256=e53dc640184f6e78f8449bd9bf03524820495b8e2eaf219cc558a87da89dbf22 (from https://pypi.org/simple/scipion-em-relion/), version: 1.0.2
2020-08-16T14:13:25,415   Found link https://files.pythonhosted.org/packages/57/e2/3c6741b62688a1b20b159f7efa0139a9573eb17d72d745b3023f2e8a51fd/scipion-em-relion-1.0.3.tar.gz#sha256=5084bfc2edf75de02f0577fe57e3f63de3e20fff862a40525971c5c3682d072a (from https://pypi.org/simple/scipion-em-relion/), version: 1.0.3
2020-08-16T14:13:25,415   Found link https://files.pythonhosted.org/packages/dd/92/ea6e7092b04a7b25c526d2c0e4243183e4146b3cbd85a6950875083a3abb/scipion-em-relion-1.0.4.tar.gz#sha256=d7adc3cc5c1f4f631cd298cea58e8c3ec035902362ba1f875059f2f9b4b58c1b (from https://pypi.org/simple/scipion-em-relion/), version: 1.0.4
2020-08-16T14:13:25,416   Found link https://files.pythonhosted.org/packages/fb/c0/9945e6d60f050b3493b46e980c1feaab668dee0cd15ba2b5030c2875bbf0/scipion-em-relion-1.0.5.tar.gz#sha256=2eeaed3eef32e0a16656bd36e4648aa68d6f3b45e8caa9e9a7af36e3a72b6449 (from https://pypi.org/simple/scipion-em-relion/), version: 1.0.5
2020-08-16T14:13:25,417   Found link https://files.pythonhosted.org/packages/86/87/bfc3ea75b9f88d116bc644ef38d709bc3a1e8cde59fc7af1cd944596713b/scipion-em-relion-1.0.6.tar.gz#sha256=326a1814aa725f2ce3bb40d7cc535d3057f17eac6a8e36232483070d2ac19d26 (from https://pypi.org/simple/scipion-em-relion/), version: 1.0.6
2020-08-16T14:13:25,418   Found link https://files.pythonhosted.org/packages/70/c1/24483e734ce2077d9fb9b1bb370ddf6ec2430e962fc1349e7ab1ac736137/scipion-em-relion-1.0.7.tar.gz#sha256=06becee63db18acc16ae2d22bac5f5c55e495922246f5aea10ffe4f47d40d9f7 (from https://pypi.org/simple/scipion-em-relion/), version: 1.0.7
2020-08-16T14:13:25,419   Found link https://files.pythonhosted.org/packages/1f/82/9f8eb2869092529d10d9d3fbdf685a232eb70971678ee502858c7c4c7e64/scipion-em-relion-1.0.8.tar.gz#sha256=88105eba3688fb98a76d3e9e5343f4688ee191a6e45343b24344e2b9ddb1b754 (from https://pypi.org/simple/scipion-em-relion/), version: 1.0.8
2020-08-16T14:13:25,420   Found link https://files.pythonhosted.org/packages/f2/3f/211e14befe51bb9447e4d024f3e01c48e96049dd00e6ca402e0b2c1e2ac6/scipion-em-relion-1.0.9.tar.gz#sha256=4fc9a904a99fbd81617b29fd9e5f6e15b67c0da5a1ed5519c548985fb0954af4 (from https://pypi.org/simple/scipion-em-relion/), version: 1.0.9
2020-08-16T14:13:25,421   Found link https://files.pythonhosted.org/packages/52/35/ffacafc5bfeeaa67e4f41bb7cff72d0a62924866ebfd565d44ec97f57b7e/scipion-em-relion-3.0.0a1.tar.gz#sha256=ceefcb9d9fe9dec42a2838ae004efc858f589aa0df5c2fd3dd561754a07d9969 (from https://pypi.org/simple/scipion-em-relion/), version: 3.0.0a1
2020-08-16T14:13:25,422   Found link https://files.pythonhosted.org/packages/64/b6/c4d9a3c1c2aa67344f07b6228f53e9e0ebab0fe70fc7516f55eaa0460d68/scipion-em-relion-3.0.0a3.tar.gz#sha256=8accb26c90bfd2965210da73a519217124a0e43bf97e046aca0431f9545e81f4 (from https://pypi.org/simple/scipion-em-relion/), version: 3.0.0a3
2020-08-16T14:13:25,423   Found link https://files.pythonhosted.org/packages/13/d4/100456e9fa33dc38a0b1b5227e351f37c088e576cb3ea18107fb046b2615/scipion-em-relion-3.0.0a4.tar.gz#sha256=6c3166a3000da47d9a72149e9bb67a8e702ae5e03a98b161b3eb104bcffec701 (from https://pypi.org/simple/scipion-em-relion/), version: 3.0.0a4
2020-08-16T14:13:25,424   Found link https://files.pythonhosted.org/packages/19/64/82b66e24e5915acf91cc9d42addb90fd8d6248afaf1c5726e086db0a9700/scipion-em-relion-3.0.0a5.tar.gz#sha256=3505e13ec6415d74268a84fd5140d996bc02970682ad3f3d5dab8ee355ac93c5 (from https://pypi.org/simple/scipion-em-relion/), version: 3.0.0a5
2020-08-16T14:13:25,425   Found link https://files.pythonhosted.org/packages/ec/16/5e1dd00f12159cbcd595e7fa61492be85d6ab9bb1e67d42f2894c688b1e6/scipion-em-relion-3.0.0b1.tar.gz#sha256=43de695bdd99abb6914c9c3749a87f39d92fd3125c1d9ecb5b7298ce671deb83 (from https://pypi.org/simple/scipion-em-relion/), version: 3.0.0b1
2020-08-16T14:13:25,426   Found link https://files.pythonhosted.org/packages/f0/d5/ed0c37467a7da0eed41919c536e67003ea386063732fb6a09c4344a7db5b/scipion-em-relion-3.0.0b2.tar.gz#sha256=20bbc33ec7673a9c8f43a964416d0caf36671d74a8320bcbfb187c160aab74f5 (from https://pypi.org/simple/scipion-em-relion/), version: 3.0.0b2
2020-08-16T14:13:25,443 Given no hashes to check 1 links for project 'scipion-em-relion': discarding no candidates
2020-08-16T14:13:25,445 Using version 3.0.0b2 (newest of versions: 3.0.0b2)
2020-08-16T14:13:25,454 Collecting scipion-em-relion==3.0.0b2
2020-08-16T14:13:25,459   Created temporary directory: /tmp/pip-unpack-hub13uyb
2020-08-16T14:13:25,714   Downloading scipion-em-relion-3.0.0b2.tar.gz (196 kB)
2020-08-16T14:13:26,339   Added scipion-em-relion==3.0.0b2 from https://files.pythonhosted.org/packages/f0/d5/ed0c37467a7da0eed41919c536e67003ea386063732fb6a09c4344a7db5b/scipion-em-relion-3.0.0b2.tar.gz#sha256=20bbc33ec7673a9c8f43a964416d0caf36671d74a8320bcbfb187c160aab74f5 to build tracker '/tmp/pip-req-tracker-cod746cn'
2020-08-16T14:13:26,341     Running setup.py (path:/tmp/pip-wheel-q580jxq0/scipion-em-relion/setup.py) egg_info for package scipion-em-relion
2020-08-16T14:13:26,343     Created temporary directory: /tmp/pip-pip-egg-info-6x031ld1
2020-08-16T14:13:26,345     Running command python setup.py egg_info
2020-08-16T14:13:28,472     running egg_info
2020-08-16T14:13:28,480     creating /tmp/pip-pip-egg-info-6x031ld1/scipion_em_relion.egg-info
2020-08-16T14:13:28,484     writing dependency_links to /tmp/pip-pip-egg-info-6x031ld1/scipion_em_relion.egg-info/dependency_links.txt
2020-08-16T14:13:28,487     writing entry points to /tmp/pip-pip-egg-info-6x031ld1/scipion_em_relion.egg-info/entry_points.txt
2020-08-16T14:13:28,491     writing requirements to /tmp/pip-pip-egg-info-6x031ld1/scipion_em_relion.egg-info/requires.txt
2020-08-16T14:13:28,494     writing top-level names to /tmp/pip-pip-egg-info-6x031ld1/scipion_em_relion.egg-info/top_level.txt
2020-08-16T14:13:28,497     writing /tmp/pip-pip-egg-info-6x031ld1/scipion_em_relion.egg-info/PKG-INFO
2020-08-16T14:13:28,506     writing manifest file '/tmp/pip-pip-egg-info-6x031ld1/scipion_em_relion.egg-info/SOURCES.txt'
2020-08-16T14:13:28,879     reading manifest file '/tmp/pip-pip-egg-info-6x031ld1/scipion_em_relion.egg-info/SOURCES.txt'
2020-08-16T14:13:28,882     reading manifest template 'MANIFEST.in'
2020-08-16T14:13:28,898     writing manifest file '/tmp/pip-pip-egg-info-6x031ld1/scipion_em_relion.egg-info/SOURCES.txt'
2020-08-16T14:13:29,039   Source in /tmp/pip-wheel-q580jxq0/scipion-em-relion has version 3.0.0b2, which satisfies requirement scipion-em-relion==3.0.0b2 from https://files.pythonhosted.org/packages/f0/d5/ed0c37467a7da0eed41919c536e67003ea386063732fb6a09c4344a7db5b/scipion-em-relion-3.0.0b2.tar.gz#sha256=20bbc33ec7673a9c8f43a964416d0caf36671d74a8320bcbfb187c160aab74f5
2020-08-16T14:13:29,041   Removed scipion-em-relion==3.0.0b2 from https://files.pythonhosted.org/packages/f0/d5/ed0c37467a7da0eed41919c536e67003ea386063732fb6a09c4344a7db5b/scipion-em-relion-3.0.0b2.tar.gz#sha256=20bbc33ec7673a9c8f43a964416d0caf36671d74a8320bcbfb187c160aab74f5 from build tracker '/tmp/pip-req-tracker-cod746cn'
2020-08-16T14:13:29,046 Building wheels for collected packages: scipion-em-relion
2020-08-16T14:13:29,055   Created temporary directory: /tmp/pip-wheel-bvs3vzsg
2020-08-16T14:13:29,056   Building wheel for scipion-em-relion (setup.py): started
2020-08-16T14:13:29,056   Destination directory: /tmp/pip-wheel-bvs3vzsg
2020-08-16T14:13:29,057   Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-q580jxq0/scipion-em-relion/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-q580jxq0/scipion-em-relion/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-bvs3vzsg
2020-08-16T14:13:31,186   running bdist_wheel
2020-08-16T14:13:31,201   running build
2020-08-16T14:13:31,202   running build_py
2020-08-16T14:13:31,540   creating build
2020-08-16T14:13:31,541   creating build/lib
2020-08-16T14:13:31,542   creating build/lib/relion
2020-08-16T14:13:31,546   copying relion/bibtex.py -> build/lib/relion
2020-08-16T14:13:31,551   copying relion/objects.py -> build/lib/relion
2020-08-16T14:13:31,556   copying relion/__init__.py -> build/lib/relion
2020-08-16T14:13:31,560   copying relion/wizards.py -> build/lib/relion
2020-08-16T14:13:31,567   copying relion/constants.py -> build/lib/relion
2020-08-16T14:13:31,577   creating build/lib/relion/convert
2020-08-16T14:13:31,579   copying relion/convert/convert30.py -> build/lib/relion/convert
2020-08-16T14:13:31,586   copying relion/convert/convert_utils.py -> build/lib/relion/convert
2020-08-16T14:13:31,592   copying relion/convert/convert_deprecated.py -> build/lib/relion/convert
2020-08-16T14:13:31,599   copying relion/convert/__init__.py -> build/lib/relion/convert
2020-08-16T14:13:31,604   copying relion/convert/convert_base.py -> build/lib/relion/convert
2020-08-16T14:13:31,610   copying relion/convert/convert31.py -> build/lib/relion/convert
2020-08-16T14:13:31,619   copying relion/convert/dataimport.py -> build/lib/relion/convert
2020-08-16T14:13:31,631   creating build/lib/relion/protocols
2020-08-16T14:13:31,633   copying relion/protocols/protocol_autopick.py -> build/lib/relion/protocols
2020-08-16T14:13:31,638   copying relion/protocols/protocol_initialmodel.py -> build/lib/relion/protocols
2020-08-16T14:13:31,645   copying relion/protocols/protocol_multibody.py -> build/lib/relion/protocols
2020-08-16T14:13:31,653   copying relion/protocols/protocol_motioncor.py -> build/lib/relion/protocols
2020-08-16T14:13:31,662   copying relion/protocols/protocol_extract_particles.py -> build/lib/relion/protocols
2020-08-16T14:13:31,669   copying relion/protocols/protocol_export_ctf.py -> build/lib/relion/protocols
2020-08-16T14:13:31,674   copying relion/protocols/protocol_refine3d.py -> build/lib/relion/protocols
2020-08-16T14:13:31,680   copying relion/protocols/protocol_center_averages.py -> build/lib/relion/protocols
2020-08-16T14:13:31,684   copying relion/protocols/protocol_compress_movies.py -> build/lib/relion/protocols
2020-08-16T14:13:31,691   copying relion/protocols/protocol_export_particles.py -> build/lib/relion/protocols
2020-08-16T14:13:31,697   copying relion/protocols/protocol_reconstruct.py -> build/lib/relion/protocols
2020-08-16T14:13:31,704   copying relion/protocols/protocol_sort.py -> build/lib/relion/protocols
2020-08-16T14:13:31,711   copying relion/protocols/protocol_classify2d.py -> build/lib/relion/protocols
2020-08-16T14:13:31,716   copying relion/protocols/protocol_postprocess.py -> build/lib/relion/protocols
2020-08-16T14:13:31,722   copying relion/protocols/protocol_autopick_log.py -> build/lib/relion/protocols
2020-08-16T14:13:31,728   copying relion/protocols/protocol_ctf_refinement.py -> build/lib/relion/protocols
2020-08-16T14:13:31,735   copying relion/protocols/protocol_base.py -> build/lib/relion/protocols
2020-08-16T14:13:31,748   copying relion/protocols/protocol_bayesian_polishing.py -> build/lib/relion/protocols
2020-08-16T14:13:31,756   copying relion/protocols/protocol_export_coords.py -> build/lib/relion/protocols
2020-08-16T14:13:31,762   copying relion/protocols/protocol_classify3d.py -> build/lib/relion/protocols
2020-08-16T14:13:31,768   copying relion/protocols/protocol_assign_optic_groups.py -> build/lib/relion/protocols
2020-08-16T14:13:31,774   copying relion/protocols/protocol_subtract.py -> build/lib/relion/protocols
2020-08-16T14:13:31,779   copying relion/protocols/protocol_expand_symmetry.py -> build/lib/relion/protocols
2020-08-16T14:13:31,784   copying relion/protocols/protocol_create_mask3d.py -> build/lib/relion/protocols
2020-08-16T14:13:31,790   copying relion/protocols/protocol_localres.py -> build/lib/relion/protocols
2020-08-16T14:13:31,797   copying relion/protocols/__init__.py -> build/lib/relion/protocols
2020-08-16T14:13:31,803   copying relion/protocols/protocol_preprocess.py -> build/lib/relion/protocols
2020-08-16T14:13:31,810   copying relion/protocols/protocol_remove_views.py -> build/lib/relion/protocols
2020-08-16T14:13:31,815   copying relion/protocols/protocol_symmetrize_volume.py -> build/lib/relion/protocols
2020-08-16T14:13:31,820   copying relion/protocols/protocol_autopick_ref.py -> build/lib/relion/protocols
2020-08-16T14:13:31,827   copying relion/protocols/protocol_compress_estimate_gain.py -> build/lib/relion/protocols
2020-08-16T14:13:31,835   creating build/lib/relion/tests
2020-08-16T14:13:31,838   copying relion/tests/test_workflow_relion3.py -> build/lib/relion/tests
2020-08-16T14:13:31,846   copying relion/tests/test_protocols_relion.py -> build/lib/relion/tests
2020-08-16T14:13:31,856   copying relion/tests/__init__.py -> build/lib/relion/tests
2020-08-16T14:13:31,861   copying relion/tests/test_convert_relion.py -> build/lib/relion/tests
2020-08-16T14:13:31,869   copying relion/tests/test_protocols_relion3.py -> build/lib/relion/tests
2020-08-16T14:13:31,879   creating build/lib/relion/viewers
2020-08-16T14:13:31,882   copying relion/viewers/viewer_base.py -> build/lib/relion/viewers
2020-08-16T14:13:31,893   copying relion/viewers/viewer_polishing.py -> build/lib/relion/viewers
2020-08-16T14:13:31,899   copying relion/viewers/viewer_motioncor.py -> build/lib/relion/viewers
2020-08-16T14:13:31,906   copying relion/viewers/viewer_sort.py -> build/lib/relion/viewers
2020-08-16T14:13:31,912   copying relion/viewers/viewer_locres.py -> build/lib/relion/viewers
2020-08-16T14:13:31,919   copying relion/viewers/viewer_ctfrefine.py -> build/lib/relion/viewers
2020-08-16T14:13:31,926   copying relion/viewers/__init__.py -> build/lib/relion/viewers
2020-08-16T14:13:31,932   copying relion/viewers/viewer_postprocess.py -> build/lib/relion/viewers
2020-08-16T14:13:31,943   copying relion/relion_logo.png -> build/lib/relion
2020-08-16T14:13:31,949   copying relion/protocols.conf -> build/lib/relion
2020-08-16T14:13:31,956   creating build/lib/relion/convert/mtfs
2020-08-16T14:13:31,959   copying relion/convert/mtfs/mtf_k2_300_ec.star -> build/lib/relion/convert/mtfs
2020-08-16T14:13:31,968   copying relion/convert/mtfs/mtf_f3_200_ec.star -> build/lib/relion/convert/mtfs
2020-08-16T14:13:31,975   copying relion/convert/mtfs/mtf_de20_300.star -> build/lib/relion/convert/mtfs
2020-08-16T14:13:31,982   copying relion/convert/mtfs/mtf_f3_300_ec.star -> build/lib/relion/convert/mtfs
2020-08-16T14:13:31,989   copying relion/convert/mtfs/mtf_f2_300.star -> build/lib/relion/convert/mtfs
2020-08-16T14:13:32,013   installing to build/bdist.linux-armv7l/wheel
2020-08-16T14:13:32,014   running install
2020-08-16T14:13:32,015   running install_lib
2020-08-16T14:13:32,023   creating build/bdist.linux-armv7l
2020-08-16T14:13:32,024   creating build/bdist.linux-armv7l/wheel
2020-08-16T14:13:32,028   creating build/bdist.linux-armv7l/wheel/relion
2020-08-16T14:13:32,031   creating build/bdist.linux-armv7l/wheel/relion/convert
2020-08-16T14:13:32,033   copying build/lib/relion/convert/convert30.py -> build/bdist.linux-armv7l/wheel/relion/convert
2020-08-16T14:13:32,040   copying build/lib/relion/convert/convert_utils.py -> build/bdist.linux-armv7l/wheel/relion/convert
2020-08-16T14:13:32,046   creating build/bdist.linux-armv7l/wheel/relion/convert/mtfs
2020-08-16T14:13:32,048   copying build/lib/relion/convert/mtfs/mtf_k2_300_ec.star -> build/bdist.linux-armv7l/wheel/relion/convert/mtfs
2020-08-16T14:13:32,055   copying build/lib/relion/convert/mtfs/mtf_f3_200_ec.star -> build/bdist.linux-armv7l/wheel/relion/convert/mtfs
2020-08-16T14:13:32,060   copying build/lib/relion/convert/mtfs/mtf_de20_300.star -> build/bdist.linux-armv7l/wheel/relion/convert/mtfs
2020-08-16T14:13:32,067   copying build/lib/relion/convert/mtfs/mtf_f3_300_ec.star -> build/bdist.linux-armv7l/wheel/relion/convert/mtfs
2020-08-16T14:13:32,073   copying build/lib/relion/convert/mtfs/mtf_f2_300.star -> build/bdist.linux-armv7l/wheel/relion/convert/mtfs
2020-08-16T14:13:32,079   copying build/lib/relion/convert/convert_deprecated.py -> build/bdist.linux-armv7l/wheel/relion/convert
2020-08-16T14:13:32,086   copying build/lib/relion/convert/__init__.py -> build/bdist.linux-armv7l/wheel/relion/convert
2020-08-16T14:13:32,091   copying build/lib/relion/convert/convert_base.py -> build/bdist.linux-armv7l/wheel/relion/convert
2020-08-16T14:13:32,097   copying build/lib/relion/convert/convert31.py -> build/bdist.linux-armv7l/wheel/relion/convert
2020-08-16T14:13:32,105   copying build/lib/relion/convert/dataimport.py -> build/bdist.linux-armv7l/wheel/relion/convert
2020-08-16T14:13:32,113   copying build/lib/relion/bibtex.py -> build/bdist.linux-armv7l/wheel/relion
2020-08-16T14:13:32,118   copying build/lib/relion/objects.py -> build/bdist.linux-armv7l/wheel/relion
2020-08-16T14:13:32,123   copying build/lib/relion/relion_logo.png -> build/bdist.linux-armv7l/wheel/relion
2020-08-16T14:13:32,127   copying build/lib/relion/__init__.py -> build/bdist.linux-armv7l/wheel/relion
2020-08-16T14:13:32,134   creating build/bdist.linux-armv7l/wheel/relion/protocols
2020-08-16T14:13:32,136   copying build/lib/relion/protocols/protocol_autopick.py -> build/bdist.linux-armv7l/wheel/relion/protocols
2020-08-16T14:13:32,143   copying build/lib/relion/protocols/protocol_initialmodel.py -> build/bdist.linux-armv7l/wheel/relion/protocols
2020-08-16T14:13:32,151   copying build/lib/relion/protocols/protocol_multibody.py -> build/bdist.linux-armv7l/wheel/relion/protocols
2020-08-16T14:13:32,158   copying build/lib/relion/protocols/protocol_motioncor.py -> build/bdist.linux-armv7l/wheel/relion/protocols
2020-08-16T14:13:32,165   copying build/lib/relion/protocols/protocol_extract_particles.py -> build/bdist.linux-armv7l/wheel/relion/protocols
2020-08-16T14:13:32,171   copying build/lib/relion/protocols/protocol_export_ctf.py -> build/bdist.linux-armv7l/wheel/relion/protocols
2020-08-16T14:13:32,176   copying build/lib/relion/protocols/protocol_refine3d.py -> build/bdist.linux-armv7l/wheel/relion/protocols
2020-08-16T14:13:32,183   copying build/lib/relion/protocols/protocol_center_averages.py -> build/bdist.linux-armv7l/wheel/relion/protocols
2020-08-16T14:13:32,189   copying build/lib/relion/protocols/protocol_compress_movies.py -> build/bdist.linux-armv7l/wheel/relion/protocols
2020-08-16T14:13:32,195   copying build/lib/relion/protocols/protocol_export_particles.py -> build/bdist.linux-armv7l/wheel/relion/protocols
2020-08-16T14:13:32,202   copying build/lib/relion/protocols/protocol_reconstruct.py -> build/bdist.linux-armv7l/wheel/relion/protocols
2020-08-16T14:13:32,209   copying build/lib/relion/protocols/protocol_sort.py -> build/bdist.linux-armv7l/wheel/relion/protocols
2020-08-16T14:13:32,216   copying build/lib/relion/protocols/protocol_classify2d.py -> build/bdist.linux-armv7l/wheel/relion/protocols
2020-08-16T14:13:32,222   copying build/lib/relion/protocols/protocol_postprocess.py -> build/bdist.linux-armv7l/wheel/relion/protocols
2020-08-16T14:13:32,230   copying build/lib/relion/protocols/protocol_autopick_log.py -> build/bdist.linux-armv7l/wheel/relion/protocols
2020-08-16T14:13:32,236   copying build/lib/relion/protocols/protocol_ctf_refinement.py -> build/bdist.linux-armv7l/wheel/relion/protocols
2020-08-16T14:13:32,244   copying build/lib/relion/protocols/protocol_base.py -> build/bdist.linux-armv7l/wheel/relion/protocols
2020-08-16T14:13:32,256   copying build/lib/relion/protocols/protocol_bayesian_polishing.py -> build/bdist.linux-armv7l/wheel/relion/protocols
2020-08-16T14:13:32,264   copying build/lib/relion/protocols/protocol_export_coords.py -> build/bdist.linux-armv7l/wheel/relion/protocols
2020-08-16T14:13:32,270   copying build/lib/relion/protocols/protocol_classify3d.py -> build/bdist.linux-armv7l/wheel/relion/protocols
2020-08-16T14:13:32,276   copying build/lib/relion/protocols/protocol_assign_optic_groups.py -> build/bdist.linux-armv7l/wheel/relion/protocols
2020-08-16T14:13:32,282   copying build/lib/relion/protocols/protocol_subtract.py -> build/bdist.linux-armv7l/wheel/relion/protocols
2020-08-16T14:13:32,287   copying build/lib/relion/protocols/protocol_expand_symmetry.py -> build/bdist.linux-armv7l/wheel/relion/protocols
2020-08-16T14:13:32,291   copying build/lib/relion/protocols/protocol_create_mask3d.py -> build/bdist.linux-armv7l/wheel/relion/protocols
2020-08-16T14:13:32,297   copying build/lib/relion/protocols/protocol_localres.py -> build/bdist.linux-armv7l/wheel/relion/protocols
2020-08-16T14:13:32,304   copying build/lib/relion/protocols/__init__.py -> build/bdist.linux-armv7l/wheel/relion/protocols
2020-08-16T14:13:32,310   copying build/lib/relion/protocols/protocol_preprocess.py -> build/bdist.linux-armv7l/wheel/relion/protocols
2020-08-16T14:13:32,317   copying build/lib/relion/protocols/protocol_remove_views.py -> build/bdist.linux-armv7l/wheel/relion/protocols
2020-08-16T14:13:32,322   copying build/lib/relion/protocols/protocol_symmetrize_volume.py -> build/bdist.linux-armv7l/wheel/relion/protocols
2020-08-16T14:13:32,326   copying build/lib/relion/protocols/protocol_autopick_ref.py -> build/bdist.linux-armv7l/wheel/relion/protocols
2020-08-16T14:13:32,333   copying build/lib/relion/protocols/protocol_compress_estimate_gain.py -> build/bdist.linux-armv7l/wheel/relion/protocols
2020-08-16T14:13:32,340   creating build/bdist.linux-armv7l/wheel/relion/tests
2020-08-16T14:13:32,343   copying build/lib/relion/tests/test_workflow_relion3.py -> build/bdist.linux-armv7l/wheel/relion/tests
2020-08-16T14:13:32,350   copying build/lib/relion/tests/test_protocols_relion.py -> build/bdist.linux-armv7l/wheel/relion/tests
2020-08-16T14:13:32,361   copying build/lib/relion/tests/__init__.py -> build/bdist.linux-armv7l/wheel/relion/tests
2020-08-16T14:13:32,365   copying build/lib/relion/tests/test_convert_relion.py -> build/bdist.linux-armv7l/wheel/relion/tests
2020-08-16T14:13:32,373   copying build/lib/relion/tests/test_protocols_relion3.py -> build/bdist.linux-armv7l/wheel/relion/tests
2020-08-16T14:13:32,380   copying build/lib/relion/wizards.py -> build/bdist.linux-armv7l/wheel/relion
2020-08-16T14:13:32,388   copying build/lib/relion/protocols.conf -> build/bdist.linux-armv7l/wheel/relion
2020-08-16T14:13:32,397   creating build/bdist.linux-armv7l/wheel/relion/viewers
2020-08-16T14:13:32,401   copying build/lib/relion/viewers/viewer_base.py -> build/bdist.linux-armv7l/wheel/relion/viewers
2020-08-16T14:13:32,410   copying build/lib/relion/viewers/viewer_polishing.py -> build/bdist.linux-armv7l/wheel/relion/viewers
2020-08-16T14:13:32,416   copying build/lib/relion/viewers/viewer_motioncor.py -> build/bdist.linux-armv7l/wheel/relion/viewers
2020-08-16T14:13:32,423   copying build/lib/relion/viewers/viewer_sort.py -> build/bdist.linux-armv7l/wheel/relion/viewers
2020-08-16T14:13:32,429   copying build/lib/relion/viewers/viewer_locres.py -> build/bdist.linux-armv7l/wheel/relion/viewers
2020-08-16T14:13:32,435   copying build/lib/relion/viewers/viewer_ctfrefine.py -> build/bdist.linux-armv7l/wheel/relion/viewers
2020-08-16T14:13:32,442   copying build/lib/relion/viewers/__init__.py -> build/bdist.linux-armv7l/wheel/relion/viewers
2020-08-16T14:13:32,446   copying build/lib/relion/viewers/viewer_postprocess.py -> build/bdist.linux-armv7l/wheel/relion/viewers
2020-08-16T14:13:32,451   copying build/lib/relion/constants.py -> build/bdist.linux-armv7l/wheel/relion
2020-08-16T14:13:32,456   running install_egg_info
2020-08-16T14:13:32,500   running egg_info
2020-08-16T14:13:32,501   writing requirements to scipion_em_relion.egg-info/requires.txt
2020-08-16T14:13:32,504   writing entry points to scipion_em_relion.egg-info/entry_points.txt
2020-08-16T14:13:32,506   writing dependency_links to scipion_em_relion.egg-info/dependency_links.txt
2020-08-16T14:13:32,509   writing top-level names to scipion_em_relion.egg-info/top_level.txt
2020-08-16T14:13:32,512   writing scipion_em_relion.egg-info/PKG-INFO
2020-08-16T14:13:32,534   reading manifest file 'scipion_em_relion.egg-info/SOURCES.txt'
2020-08-16T14:13:32,541   reading manifest template 'MANIFEST.in'
2020-08-16T14:13:32,559   writing manifest file 'scipion_em_relion.egg-info/SOURCES.txt'
2020-08-16T14:13:32,563   Copying scipion_em_relion.egg-info to build/bdist.linux-armv7l/wheel/scipion_em_relion-3.0.0b2-py3.5.egg-info
2020-08-16T14:13:32,595   running install_scripts
2020-08-16T14:13:32,789   creating build/bdist.linux-armv7l/wheel/scipion_em_relion-3.0.0b2.dist-info/WHEEL
2020-08-16T14:13:33,388   Building wheel for scipion-em-relion (setup.py): finished with status 'done'
2020-08-16T14:13:33,396   Created wheel for scipion-em-relion: filename=scipion_em_relion-3.0.0b2-py3-none-any.whl size=240808 sha256=2241607f21e999b96f7f5f81770dfbb43aede24fe073bdd168bf2cb7a33c84ac
2020-08-16T14:13:33,397   Stored in directory: /tmp/pip-ephem-wheel-cache-3sa33r0j/wheels/61/0e/35/3352f3ebf05775514f762aa2731bf646dcf3da9cbd9034625f
2020-08-16T14:13:33,401 Successfully built scipion-em-relion
2020-08-16T14:13:33,449 Removed build tracker: '/tmp/pip-req-tracker-cod746cn'