2020-08-19T11:31:46,744 Created temporary directory: /tmp/pip-ephem-wheel-cache-p_rub1u7 2020-08-19T11:31:46,749 Created temporary directory: /tmp/pip-req-tracker-t_8m96pe 2020-08-19T11:31:46,750 Initialized build tracking at /tmp/pip-req-tracker-t_8m96pe 2020-08-19T11:31:46,750 Created build tracker: /tmp/pip-req-tracker-t_8m96pe 2020-08-19T11:31:46,751 Entered build tracker: /tmp/pip-req-tracker-t_8m96pe 2020-08-19T11:31:46,752 Created temporary directory: /tmp/pip-wheel-blzadux7 2020-08-19T11:31:46,770 1 location(s) to search for versions of h1s: 2020-08-19T11:31:46,770 * https://pypi.org/simple/h1s/ 2020-08-19T11:31:46,770 Fetching project page and analyzing links: https://pypi.org/simple/h1s/ 2020-08-19T11:31:46,771 Getting page https://pypi.org/simple/h1s/ 2020-08-19T11:31:46,774 Found index url https://pypi.org/simple 2020-08-19T11:31:46,994 Found link https://files.pythonhosted.org/packages/8c/1f/249d78d6f5c1efef2158301b18a5d076a3b2b6fbfbca27f961ffb7de3184/h1s-2.1.0-py3-none-any.whl#sha256=868cf2c9ebcf5df9d24b25259f0e91c8c26c94d8dcc7094b1cb0eaf77c6609e1 (from https://pypi.org/simple/h1s/) (requires-python:>=3.7.0), version: 2.1.0 2020-08-19T11:31:46,995 Found link https://files.pythonhosted.org/packages/e1/dd/fb8acebc191cc93610bd64b9c5de03c67577e07460f66049d7062d59b1bc/h1s-2.1.0.tar.gz#sha256=796315bbec1f23d9fe28b45bf9a36f093d2a712136232b21a115f548e5bb4ce0 (from https://pypi.org/simple/h1s/) (requires-python:>=3.7.0), version: 2.1.0 2020-08-19T11:31:46,997 Found link https://files.pythonhosted.org/packages/43/09/39ebc33aad87f168fdfdf5d0fc4b8dc4b19400900a0ac003092f9d14f896/h1s-2.1.1-py3-none-any.whl#sha256=9f82ab7d4e62a825f3fe6e2015cf82694c4b69435be5004ecbaf7cd1e4ba0290 (from https://pypi.org/simple/h1s/) (requires-python:>=3.7.0), version: 2.1.1 2020-08-19T11:31:46,998 Found link https://files.pythonhosted.org/packages/47/ec/a25cecd5fd47a86393c96c9935e7cf1b99bd16cf67c0ca9acf519562b517/h1s-2.1.1.tar.gz#sha256=2c34f87583387ad13e2366d2dfd8328010db683b0b7b7095bb7544655b845298 (from https://pypi.org/simple/h1s/) (requires-python:>=3.7.0), version: 2.1.1 2020-08-19T11:31:46,1000 Found link https://files.pythonhosted.org/packages/b9/ee/06429f8e84e5a930e50ebad6023fee4154101ab9755ca0913b39256e1b35/h1s-2.1.2-py3-none-any.whl#sha256=1f6254fe5dd7474e9a6e74a357af17d5ff5d590a1e27879af5858341d37be66e (from https://pypi.org/simple/h1s/) (requires-python:>=3.7.0), version: 2.1.2 2020-08-19T11:31:47,001 Found link https://files.pythonhosted.org/packages/2f/17/e87cae27c8a233e333eddfdd27872e59fd37ea3ce7396fb7455504f20648/h1s-2.1.2.tar.gz#sha256=34da285adfa241750a3e2e9c3fa6d168aba1bbb1f4c14b9495f3af1aeaeffd01 (from https://pypi.org/simple/h1s/) (requires-python:>=3.7.0), version: 2.1.2 2020-08-19T11:31:47,002 Found link https://files.pythonhosted.org/packages/b4/dd/3cb9b23266db2155d56de3358bb4b1ffaf8fed60b3fefcc1e4c817fa3f52/h1s-2.1.3.tar.gz#sha256=fcc959747ae0f0ed263c1b18527355b54de0cf8c56ff536c6216b87bb9f046d3 (from https://pypi.org/simple/h1s/) (requires-python:>=3.7.0), version: 2.1.3 2020-08-19T11:31:47,004 Found link https://files.pythonhosted.org/packages/bc/98/448ddb840c65732768286c232af344f992d09ac08ce4dca687f060898edd/h1s-2.1.4.tar.gz#sha256=0024f80141c395f62eadbfd4751eec3e4313b79bfba19e3eb218573cfe3778a2 (from https://pypi.org/simple/h1s/) (requires-python:>=3.7.0), version: 2.1.4 2020-08-19T11:31:47,005 Found link https://files.pythonhosted.org/packages/0f/b5/fbea08c76c3ebb08f6e72ee7b46efef588261586ab9f9f663d51a7b4aa45/h1s-2.1.5.tar.gz#sha256=7c03558bff627b310632ec7da84977c8e610e52ae64b6ea10974085665ff5108 (from https://pypi.org/simple/h1s/) (requires-python:>=3.7.0), version: 2.1.5 2020-08-19T11:31:47,009 Given no hashes to check 1 links for project 'h1s': discarding no candidates 2020-08-19T11:31:47,010 Using version 2.1.5 (newest of versions: 2.1.5) 2020-08-19T11:31:47,017 Collecting h1s==2.1.5 2020-08-19T11:31:47,021 Created temporary directory: /tmp/pip-unpack-8dn6al9m 2020-08-19T11:31:47,262 Downloading h1s-2.1.5.tar.gz (81 kB) 2020-08-19T11:31:47,496 Added h1s==2.1.5 from https://files.pythonhosted.org/packages/0f/b5/fbea08c76c3ebb08f6e72ee7b46efef588261586ab9f9f663d51a7b4aa45/h1s-2.1.5.tar.gz#sha256=7c03558bff627b310632ec7da84977c8e610e52ae64b6ea10974085665ff5108 to build tracker '/tmp/pip-req-tracker-t_8m96pe' 2020-08-19T11:31:47,498 Running setup.py (path:/tmp/pip-wheel-blzadux7/h1s/setup.py) egg_info for package h1s 2020-08-19T11:31:47,500 Created temporary directory: /tmp/pip-pip-egg-info-h59es7nj 2020-08-19T11:31:47,500 Running command python setup.py egg_info 2020-08-19T11:31:50,080 running egg_info 2020-08-19T11:31:50,085 creating /tmp/pip-pip-egg-info-h59es7nj/h1s.egg-info 2020-08-19T11:31:50,088 writing /tmp/pip-pip-egg-info-h59es7nj/h1s.egg-info/PKG-INFO 2020-08-19T11:31:50,095 writing dependency_links to /tmp/pip-pip-egg-info-h59es7nj/h1s.egg-info/dependency_links.txt 2020-08-19T11:31:50,100 writing entry points to /tmp/pip-pip-egg-info-h59es7nj/h1s.egg-info/entry_points.txt 2020-08-19T11:31:50,103 writing requirements to /tmp/pip-pip-egg-info-h59es7nj/h1s.egg-info/requires.txt 2020-08-19T11:31:50,106 writing top-level names to /tmp/pip-pip-egg-info-h59es7nj/h1s.egg-info/top_level.txt 2020-08-19T11:31:50,110 writing manifest file '/tmp/pip-pip-egg-info-h59es7nj/h1s.egg-info/SOURCES.txt' 2020-08-19T11:31:50,482 reading manifest file '/tmp/pip-pip-egg-info-h59es7nj/h1s.egg-info/SOURCES.txt' 2020-08-19T11:31:50,486 reading manifest template 'MANIFEST.in' 2020-08-19T11:31:50,489 warning: no files found matching '*' under directory 'hamstr1s' 2020-08-19T11:31:50,496 writing manifest file '/tmp/pip-pip-egg-info-h59es7nj/h1s.egg-info/SOURCES.txt' 2020-08-19T11:31:50,616 Source in /tmp/pip-wheel-blzadux7/h1s has version 2.1.5, which satisfies requirement h1s==2.1.5 from https://files.pythonhosted.org/packages/0f/b5/fbea08c76c3ebb08f6e72ee7b46efef588261586ab9f9f663d51a7b4aa45/h1s-2.1.5.tar.gz#sha256=7c03558bff627b310632ec7da84977c8e610e52ae64b6ea10974085665ff5108 2020-08-19T11:31:50,618 Removed h1s==2.1.5 from https://files.pythonhosted.org/packages/0f/b5/fbea08c76c3ebb08f6e72ee7b46efef588261586ab9f9f663d51a7b4aa45/h1s-2.1.5.tar.gz#sha256=7c03558bff627b310632ec7da84977c8e610e52ae64b6ea10974085665ff5108 from build tracker '/tmp/pip-req-tracker-t_8m96pe' 2020-08-19T11:31:50,623 Building wheels for collected packages: h1s 2020-08-19T11:31:50,632 Created temporary directory: /tmp/pip-wheel-6_vsl0zk 2020-08-19T11:31:50,633 Building wheel for h1s (setup.py): started 2020-08-19T11:31:50,634 Destination directory: /tmp/pip-wheel-6_vsl0zk 2020-08-19T11:31:50,635 Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-blzadux7/h1s/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-blzadux7/h1s/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-6_vsl0zk 2020-08-19T11:31:52,574 running bdist_wheel 2020-08-19T11:31:52,590 running build 2020-08-19T11:31:52,591 running build_py 2020-08-19T11:31:52,868 creating build 2020-08-19T11:31:52,869 creating build/lib 2020-08-19T11:31:52,871 creating build/lib/h1s 2020-08-19T11:31:52,874 copying h1s/setup1s.py -> build/lib/h1s 2020-08-19T11:31:52,879 copying h1s/remove1s.py -> build/lib/h1s 2020-08-19T11:31:52,883 copying h1s/addTaxon1s.py -> build/lib/h1s 2020-08-19T11:31:52,889 copying h1s/checkData1s.py -> build/lib/h1s 2020-08-19T11:31:52,895 copying h1s/addTaxa1s.py -> build/lib/h1s 2020-08-19T11:31:52,899 copying h1s/__init__.py -> build/lib/h1s 2020-08-19T11:31:52,903 copying h1s/runOneseq.py -> build/lib/h1s 2020-08-19T11:31:52,910 copying h1s/mergeOutput1s.py -> build/lib/h1s 2020-08-19T11:31:52,916 creating build/lib/h1s/bin 2020-08-19T11:31:52,917 copying h1s/bin/__init__.py -> build/lib/h1s/bin 2020-08-19T11:31:52,922 creating build/lib/h1s/data 2020-08-19T11:31:52,924 copying h1s/data/__init__.py -> build/lib/h1s/data 2020-08-19T11:31:52,929 creating build/lib/h1s/setup 2020-08-19T11:31:52,931 copying h1s/setup/__init__.py -> build/lib/h1s/setup 2020-08-19T11:31:52,953 copying h1s/bin/run_genewise_hamstr.pm -> build/lib/h1s/bin 2020-08-19T11:31:52,959 copying h1s/bin/hamstr.pl -> build/lib/h1s/bin 2020-08-19T11:31:52,972 copying h1s/bin/translate.pl -> build/lib/h1s/bin 2020-08-19T11:31:52,978 copying h1s/bin/oneSeq.pl -> build/lib/h1s/bin 2020-08-19T11:31:52,991 copying h1s/bin/Filehandler.pm -> build/lib/h1s/bin 2020-08-19T11:31:52,997 copying h1s/data/infile.fa -> build/lib/h1s/data 2020-08-19T11:31:53,003 copying h1s/setup/install_lib.sh -> build/lib/h1s/setup 2020-08-19T11:31:53,008 copying h1s/setup/setup.sh -> build/lib/h1s/setup 2020-08-19T11:31:53,015 copying h1s/setup/indexTaxonomy.pl -> build/lib/h1s/setup 2020-08-19T11:31:53,020 copying h1s/setup/setup_conda.sh -> build/lib/h1s/setup 2020-08-19T11:31:53,036 installing to build/bdist.linux-armv7l/wheel 2020-08-19T11:31:53,036 running install 2020-08-19T11:31:53,038 running install_lib 2020-08-19T11:31:53,045 creating build/bdist.linux-armv7l 2020-08-19T11:31:53,046 creating build/bdist.linux-armv7l/wheel 2020-08-19T11:31:53,050 creating build/bdist.linux-armv7l/wheel/h1s 2020-08-19T11:31:53,052 copying build/lib/h1s/setup1s.py -> build/bdist.linux-armv7l/wheel/h1s 2020-08-19T11:31:53,057 copying build/lib/h1s/remove1s.py -> build/bdist.linux-armv7l/wheel/h1s 2020-08-19T11:31:53,063 creating build/bdist.linux-armv7l/wheel/h1s/bin 2020-08-19T11:31:53,065 copying build/lib/h1s/bin/run_genewise_hamstr.pm -> build/bdist.linux-armv7l/wheel/h1s/bin 2020-08-19T11:31:53,071 copying build/lib/h1s/bin/hamstr.pl -> build/bdist.linux-armv7l/wheel/h1s/bin 2020-08-19T11:31:53,083 copying build/lib/h1s/bin/translate.pl -> build/bdist.linux-armv7l/wheel/h1s/bin 2020-08-19T11:31:53,088 copying build/lib/h1s/bin/oneSeq.pl -> build/bdist.linux-armv7l/wheel/h1s/bin 2020-08-19T11:31:53,101 copying build/lib/h1s/bin/Filehandler.pm -> build/bdist.linux-armv7l/wheel/h1s/bin 2020-08-19T11:31:53,105 copying build/lib/h1s/bin/__init__.py -> build/bdist.linux-armv7l/wheel/h1s/bin 2020-08-19T11:31:53,109 creating build/bdist.linux-armv7l/wheel/h1s/data 2020-08-19T11:31:53,111 copying build/lib/h1s/data/infile.fa -> build/bdist.linux-armv7l/wheel/h1s/data 2020-08-19T11:31:53,116 copying build/lib/h1s/data/__init__.py -> build/bdist.linux-armv7l/wheel/h1s/data 2020-08-19T11:31:53,119 copying build/lib/h1s/addTaxon1s.py -> build/bdist.linux-armv7l/wheel/h1s 2020-08-19T11:31:53,125 copying build/lib/h1s/checkData1s.py -> build/bdist.linux-armv7l/wheel/h1s 2020-08-19T11:31:53,130 copying build/lib/h1s/addTaxa1s.py -> build/bdist.linux-armv7l/wheel/h1s 2020-08-19T11:31:53,136 copying build/lib/h1s/__init__.py -> build/bdist.linux-armv7l/wheel/h1s 2020-08-19T11:31:53,139 copying build/lib/h1s/runOneseq.py -> build/bdist.linux-armv7l/wheel/h1s 2020-08-19T11:31:53,147 creating build/bdist.linux-armv7l/wheel/h1s/setup 2020-08-19T11:31:53,149 copying build/lib/h1s/setup/install_lib.sh -> build/bdist.linux-armv7l/wheel/h1s/setup 2020-08-19T11:31:53,154 copying build/lib/h1s/setup/setup.sh -> build/bdist.linux-armv7l/wheel/h1s/setup 2020-08-19T11:31:53,160 copying build/lib/h1s/setup/indexTaxonomy.pl -> build/bdist.linux-armv7l/wheel/h1s/setup 2020-08-19T11:31:53,164 copying build/lib/h1s/setup/__init__.py -> build/bdist.linux-armv7l/wheel/h1s/setup 2020-08-19T11:31:53,168 copying build/lib/h1s/setup/setup_conda.sh -> build/bdist.linux-armv7l/wheel/h1s/setup 2020-08-19T11:31:53,173 copying build/lib/h1s/mergeOutput1s.py -> build/bdist.linux-armv7l/wheel/h1s 2020-08-19T11:31:53,177 running install_egg_info 2020-08-19T11:31:53,219 running egg_info 2020-08-19T11:31:53,220 writing h1s.egg-info/PKG-INFO 2020-08-19T11:31:53,225 writing dependency_links to h1s.egg-info/dependency_links.txt 2020-08-19T11:31:53,229 writing entry points to h1s.egg-info/entry_points.txt 2020-08-19T11:31:53,232 writing requirements to h1s.egg-info/requires.txt 2020-08-19T11:31:53,234 writing top-level names to h1s.egg-info/top_level.txt 2020-08-19T11:31:53,247 reading manifest file 'h1s.egg-info/SOURCES.txt' 2020-08-19T11:31:53,251 reading manifest template 'MANIFEST.in' 2020-08-19T11:31:53,253 warning: no files found matching '*' under directory 'hamstr1s' 2020-08-19T11:31:53,259 writing manifest file 'h1s.egg-info/SOURCES.txt' 2020-08-19T11:31:53,262 Copying h1s.egg-info to build/bdist.linux-armv7l/wheel/h1s-2.1.5-py3.7.egg-info 2020-08-19T11:31:53,291 running install_scripts 2020-08-19T11:31:53,493 creating build/bdist.linux-armv7l/wheel/h1s-2.1.5.dist-info/WHEEL 2020-08-19T11:31:53,498 creating '/tmp/pip-wheel-6_vsl0zk/h1s-2.1.5-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2020-08-19T11:31:53,504 adding 'h1s/__init__.py' 2020-08-19T11:31:53,509 adding 'h1s/addTaxa1s.py' 2020-08-19T11:31:53,513 adding 'h1s/addTaxon1s.py' 2020-08-19T11:31:53,517 adding 'h1s/checkData1s.py' 2020-08-19T11:31:53,520 adding 'h1s/mergeOutput1s.py' 2020-08-19T11:31:53,523 adding 'h1s/remove1s.py' 2020-08-19T11:31:53,531 adding 'h1s/runOneseq.py' 2020-08-19T11:31:53,534 adding 'h1s/setup1s.py' 2020-08-19T11:31:53,537 adding 'h1s/bin/Filehandler.pm' 2020-08-19T11:31:53,540 adding 'h1s/bin/__init__.py' 2020-08-19T11:31:53,560 adding 'h1s/bin/hamstr.pl' 2020-08-19T11:31:53,582 adding 'h1s/bin/oneSeq.pl' 2020-08-19T11:31:53,586 adding 'h1s/bin/run_genewise_hamstr.pm' 2020-08-19T11:31:53,589 adding 'h1s/bin/translate.pl' 2020-08-19T11:31:53,593 adding 'h1s/data/__init__.py' 2020-08-19T11:31:53,595 adding 'h1s/data/infile.fa' 2020-08-19T11:31:53,598 adding 'h1s/setup/__init__.py' 2020-08-19T11:31:53,601 adding 'h1s/setup/indexTaxonomy.pl' 2020-08-19T11:31:53,604 adding 'h1s/setup/install_lib.sh' 2020-08-19T11:31:53,611 adding 'h1s/setup/setup.sh' 2020-08-19T11:31:53,616 adding 'h1s/setup/setup_conda.sh' 2020-08-19T11:31:53,623 adding 'h1s-2.1.5.dist-info/METADATA' 2020-08-19T11:31:53,626 adding 'h1s-2.1.5.dist-info/WHEEL' 2020-08-19T11:31:53,628 adding 'h1s-2.1.5.dist-info/entry_points.txt' 2020-08-19T11:31:53,633 adding 'h1s-2.1.5.dist-info/top_level.txt' 2020-08-19T11:31:53,634 adding 'h1s-2.1.5.dist-info/RECORD' 2020-08-19T11:31:53,643 removing build/bdist.linux-armv7l/wheel 2020-08-19T11:31:53,805 Building wheel for h1s (setup.py): finished with status 'done' 2020-08-19T11:31:53,811 Created wheel for h1s: filename=h1s-2.1.5-py3-none-any.whl size=90057 sha256=b86cc31cebb3adfcd7085f972c7777ee952d17b70043f8590dbe6ed872d70dbc 2020-08-19T11:31:53,812 Stored in directory: /tmp/pip-ephem-wheel-cache-p_rub1u7/wheels/ec/61/1b/ddfd0b217f368ef1cce78ebeb8b6955a7ea4494951499c5b36 2020-08-19T11:31:53,816 Successfully built h1s 2020-08-19T11:31:53,838 Removed build tracker: '/tmp/pip-req-tracker-t_8m96pe'