2020-08-23T14:15:09,572 Created temporary directory: /tmp/pip-ephem-wheel-cache-a02yema5 2020-08-23T14:15:09,577 Created temporary directory: /tmp/pip-req-tracker-tqomw2k2 2020-08-23T14:15:09,577 Initialized build tracking at /tmp/pip-req-tracker-tqomw2k2 2020-08-23T14:15:09,578 Created build tracker: /tmp/pip-req-tracker-tqomw2k2 2020-08-23T14:15:09,578 Entered build tracker: /tmp/pip-req-tracker-tqomw2k2 2020-08-23T14:15:09,579 Created temporary directory: /tmp/pip-wheel-0d3wulgn 2020-08-23T14:15:09,597 1 location(s) to search for versions of h1s: 2020-08-23T14:15:09,597 * https://pypi.org/simple/h1s/ 2020-08-23T14:15:09,598 Fetching project page and analyzing links: https://pypi.org/simple/h1s/ 2020-08-23T14:15:09,599 Getting page https://pypi.org/simple/h1s/ 2020-08-23T14:15:09,601 Found index url https://pypi.org/simple 2020-08-23T14:15:09,823 Found link https://files.pythonhosted.org/packages/8c/1f/249d78d6f5c1efef2158301b18a5d076a3b2b6fbfbca27f961ffb7de3184/h1s-2.1.0-py3-none-any.whl#sha256=868cf2c9ebcf5df9d24b25259f0e91c8c26c94d8dcc7094b1cb0eaf77c6609e1 (from https://pypi.org/simple/h1s/) (requires-python:>=3.7.0), version: 2.1.0 2020-08-23T14:15:09,825 Found link https://files.pythonhosted.org/packages/e1/dd/fb8acebc191cc93610bd64b9c5de03c67577e07460f66049d7062d59b1bc/h1s-2.1.0.tar.gz#sha256=796315bbec1f23d9fe28b45bf9a36f093d2a712136232b21a115f548e5bb4ce0 (from https://pypi.org/simple/h1s/) (requires-python:>=3.7.0), version: 2.1.0 2020-08-23T14:15:09,826 Found link https://files.pythonhosted.org/packages/43/09/39ebc33aad87f168fdfdf5d0fc4b8dc4b19400900a0ac003092f9d14f896/h1s-2.1.1-py3-none-any.whl#sha256=9f82ab7d4e62a825f3fe6e2015cf82694c4b69435be5004ecbaf7cd1e4ba0290 (from https://pypi.org/simple/h1s/) (requires-python:>=3.7.0), version: 2.1.1 2020-08-23T14:15:09,827 Found link https://files.pythonhosted.org/packages/47/ec/a25cecd5fd47a86393c96c9935e7cf1b99bd16cf67c0ca9acf519562b517/h1s-2.1.1.tar.gz#sha256=2c34f87583387ad13e2366d2dfd8328010db683b0b7b7095bb7544655b845298 (from https://pypi.org/simple/h1s/) (requires-python:>=3.7.0), version: 2.1.1 2020-08-23T14:15:09,829 Found link https://files.pythonhosted.org/packages/b9/ee/06429f8e84e5a930e50ebad6023fee4154101ab9755ca0913b39256e1b35/h1s-2.1.2-py3-none-any.whl#sha256=1f6254fe5dd7474e9a6e74a357af17d5ff5d590a1e27879af5858341d37be66e (from https://pypi.org/simple/h1s/) (requires-python:>=3.7.0), version: 2.1.2 2020-08-23T14:15:09,830 Found link https://files.pythonhosted.org/packages/2f/17/e87cae27c8a233e333eddfdd27872e59fd37ea3ce7396fb7455504f20648/h1s-2.1.2.tar.gz#sha256=34da285adfa241750a3e2e9c3fa6d168aba1bbb1f4c14b9495f3af1aeaeffd01 (from https://pypi.org/simple/h1s/) (requires-python:>=3.7.0), version: 2.1.2 2020-08-23T14:15:09,832 Found link https://files.pythonhosted.org/packages/b4/dd/3cb9b23266db2155d56de3358bb4b1ffaf8fed60b3fefcc1e4c817fa3f52/h1s-2.1.3.tar.gz#sha256=fcc959747ae0f0ed263c1b18527355b54de0cf8c56ff536c6216b87bb9f046d3 (from https://pypi.org/simple/h1s/) (requires-python:>=3.7.0), version: 2.1.3 2020-08-23T14:15:09,833 Found link https://files.pythonhosted.org/packages/bc/98/448ddb840c65732768286c232af344f992d09ac08ce4dca687f060898edd/h1s-2.1.4.tar.gz#sha256=0024f80141c395f62eadbfd4751eec3e4313b79bfba19e3eb218573cfe3778a2 (from https://pypi.org/simple/h1s/) (requires-python:>=3.7.0), version: 2.1.4 2020-08-23T14:15:09,834 Found link https://files.pythonhosted.org/packages/0f/b5/fbea08c76c3ebb08f6e72ee7b46efef588261586ab9f9f663d51a7b4aa45/h1s-2.1.5.tar.gz#sha256=7c03558bff627b310632ec7da84977c8e610e52ae64b6ea10974085665ff5108 (from https://pypi.org/simple/h1s/) (requires-python:>=3.7.0), version: 2.1.5 2020-08-23T14:15:09,835 Found link https://files.pythonhosted.org/packages/c7/e0/74e2a7660bd24ea76b37cbb54353b1e37f563107edf2830be386cf378561/h1s-2.1.6.tar.gz#sha256=c423598ab7a9870c676e6e733f8e7cbf5e5599acf1bd9d966f11c9f50af34baa (from https://pypi.org/simple/h1s/) (requires-python:>=3.7.0), version: 2.1.6 2020-08-23T14:15:09,836 Found link https://files.pythonhosted.org/packages/7d/b0/38a6f12060bfe1c004712d74a924f1edcb23a98b17a23d5d2d8c2c779a73/h1s-2.1.7.tar.gz#sha256=69b4ab7869c6153acb3ee89d8fc4813d6272a4aecf2ecbbdc8b6e2d8d1d68a72 (from https://pypi.org/simple/h1s/) (requires-python:>=3.7.0), version: 2.1.7 2020-08-23T14:15:09,841 Given no hashes to check 1 links for project 'h1s': discarding no candidates 2020-08-23T14:15:09,842 Using version 2.1.7 (newest of versions: 2.1.7) 2020-08-23T14:15:09,849 Collecting h1s==2.1.7 2020-08-23T14:15:09,853 Created temporary directory: /tmp/pip-unpack-ahhzinn1 2020-08-23T14:15:10,066 Downloading h1s-2.1.7.tar.gz (82 kB) 2020-08-23T14:15:10,301 Added h1s==2.1.7 from https://files.pythonhosted.org/packages/7d/b0/38a6f12060bfe1c004712d74a924f1edcb23a98b17a23d5d2d8c2c779a73/h1s-2.1.7.tar.gz#sha256=69b4ab7869c6153acb3ee89d8fc4813d6272a4aecf2ecbbdc8b6e2d8d1d68a72 to build tracker '/tmp/pip-req-tracker-tqomw2k2' 2020-08-23T14:15:10,303 Running setup.py (path:/tmp/pip-wheel-0d3wulgn/h1s/setup.py) egg_info for package h1s 2020-08-23T14:15:10,304 Created temporary directory: /tmp/pip-pip-egg-info-e6duryqo 2020-08-23T14:15:10,305 Running command python setup.py egg_info 2020-08-23T14:15:12,149 running egg_info 2020-08-23T14:15:12,153 creating /tmp/pip-pip-egg-info-e6duryqo/h1s.egg-info 2020-08-23T14:15:12,155 writing /tmp/pip-pip-egg-info-e6duryqo/h1s.egg-info/PKG-INFO 2020-08-23T14:15:12,161 writing dependency_links to /tmp/pip-pip-egg-info-e6duryqo/h1s.egg-info/dependency_links.txt 2020-08-23T14:15:12,165 writing entry points to /tmp/pip-pip-egg-info-e6duryqo/h1s.egg-info/entry_points.txt 2020-08-23T14:15:12,168 writing requirements to /tmp/pip-pip-egg-info-e6duryqo/h1s.egg-info/requires.txt 2020-08-23T14:15:12,171 writing top-level names to /tmp/pip-pip-egg-info-e6duryqo/h1s.egg-info/top_level.txt 2020-08-23T14:15:12,175 writing manifest file '/tmp/pip-pip-egg-info-e6duryqo/h1s.egg-info/SOURCES.txt' 2020-08-23T14:15:12,476 reading manifest file '/tmp/pip-pip-egg-info-e6duryqo/h1s.egg-info/SOURCES.txt' 2020-08-23T14:15:12,480 reading manifest template 'MANIFEST.in' 2020-08-23T14:15:12,482 warning: no files found matching '*' under directory 'hamstr1s' 2020-08-23T14:15:12,487 writing manifest file '/tmp/pip-pip-egg-info-e6duryqo/h1s.egg-info/SOURCES.txt' 2020-08-23T14:15:12,606 Source in /tmp/pip-wheel-0d3wulgn/h1s has version 2.1.7, which satisfies requirement h1s==2.1.7 from https://files.pythonhosted.org/packages/7d/b0/38a6f12060bfe1c004712d74a924f1edcb23a98b17a23d5d2d8c2c779a73/h1s-2.1.7.tar.gz#sha256=69b4ab7869c6153acb3ee89d8fc4813d6272a4aecf2ecbbdc8b6e2d8d1d68a72 2020-08-23T14:15:12,607 Removed h1s==2.1.7 from https://files.pythonhosted.org/packages/7d/b0/38a6f12060bfe1c004712d74a924f1edcb23a98b17a23d5d2d8c2c779a73/h1s-2.1.7.tar.gz#sha256=69b4ab7869c6153acb3ee89d8fc4813d6272a4aecf2ecbbdc8b6e2d8d1d68a72 from build tracker '/tmp/pip-req-tracker-tqomw2k2' 2020-08-23T14:15:12,613 Building wheels for collected packages: h1s 2020-08-23T14:15:12,621 Created temporary directory: /tmp/pip-wheel-r7gy479w 2020-08-23T14:15:12,622 Building wheel for h1s (setup.py): started 2020-08-23T14:15:12,623 Destination directory: /tmp/pip-wheel-r7gy479w 2020-08-23T14:15:12,623 Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-0d3wulgn/h1s/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-0d3wulgn/h1s/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-r7gy479w 2020-08-23T14:15:14,416 running bdist_wheel 2020-08-23T14:15:14,430 running build 2020-08-23T14:15:14,431 running build_py 2020-08-23T14:15:14,707 creating build 2020-08-23T14:15:14,707 creating build/lib 2020-08-23T14:15:14,709 creating build/lib/h1s 2020-08-23T14:15:14,712 copying h1s/setup1s.py -> build/lib/h1s 2020-08-23T14:15:14,717 copying h1s/remove1s.py -> build/lib/h1s 2020-08-23T14:15:14,721 copying h1s/addTaxon1s.py -> build/lib/h1s 2020-08-23T14:15:14,726 copying h1s/checkData1s.py -> build/lib/h1s 2020-08-23T14:15:14,731 copying h1s/addTaxa1s.py -> build/lib/h1s 2020-08-23T14:15:14,736 copying h1s/__init__.py -> build/lib/h1s 2020-08-23T14:15:14,740 copying h1s/runOneseq.py -> build/lib/h1s 2020-08-23T14:15:14,746 copying h1s/mergeOutput1s.py -> build/lib/h1s 2020-08-23T14:15:14,751 creating build/lib/h1s/bin 2020-08-23T14:15:14,753 copying h1s/bin/__init__.py -> build/lib/h1s/bin 2020-08-23T14:15:14,758 creating build/lib/h1s/data 2020-08-23T14:15:14,760 copying h1s/data/__init__.py -> build/lib/h1s/data 2020-08-23T14:15:14,764 creating build/lib/h1s/setup 2020-08-23T14:15:14,766 copying h1s/setup/__init__.py -> build/lib/h1s/setup 2020-08-23T14:15:14,784 copying h1s/bin/run_genewise_hamstr.pm -> build/lib/h1s/bin 2020-08-23T14:15:14,791 copying h1s/bin/hamstr.pl -> build/lib/h1s/bin 2020-08-23T14:15:14,804 copying h1s/bin/translate.pl -> build/lib/h1s/bin 2020-08-23T14:15:14,809 copying h1s/bin/oneSeq.pl -> build/lib/h1s/bin 2020-08-23T14:15:14,823 copying h1s/bin/Filehandler.pm -> build/lib/h1s/bin 2020-08-23T14:15:14,829 copying h1s/data/infile.fa -> build/lib/h1s/data 2020-08-23T14:15:14,835 copying h1s/setup/install_lib.sh -> build/lib/h1s/setup 2020-08-23T14:15:14,840 copying h1s/setup/setup.sh -> build/lib/h1s/setup 2020-08-23T14:15:14,847 copying h1s/setup/indexTaxonomy.pl -> build/lib/h1s/setup 2020-08-23T14:15:14,853 copying h1s/setup/setup_conda.sh -> build/lib/h1s/setup 2020-08-23T14:15:14,869 installing to build/bdist.linux-armv7l/wheel 2020-08-23T14:15:14,869 running install 2020-08-23T14:15:14,871 running install_lib 2020-08-23T14:15:14,878 creating build/bdist.linux-armv7l 2020-08-23T14:15:14,879 creating build/bdist.linux-armv7l/wheel 2020-08-23T14:15:14,883 creating build/bdist.linux-armv7l/wheel/h1s 2020-08-23T14:15:14,885 copying build/lib/h1s/setup1s.py -> build/bdist.linux-armv7l/wheel/h1s 2020-08-23T14:15:14,890 copying build/lib/h1s/remove1s.py -> build/bdist.linux-armv7l/wheel/h1s 2020-08-23T14:15:14,896 creating build/bdist.linux-armv7l/wheel/h1s/bin 2020-08-23T14:15:14,898 copying build/lib/h1s/bin/run_genewise_hamstr.pm -> build/bdist.linux-armv7l/wheel/h1s/bin 2020-08-23T14:15:14,903 copying build/lib/h1s/bin/hamstr.pl -> build/bdist.linux-armv7l/wheel/h1s/bin 2020-08-23T14:15:14,916 copying build/lib/h1s/bin/translate.pl -> build/bdist.linux-armv7l/wheel/h1s/bin 2020-08-23T14:15:14,921 copying build/lib/h1s/bin/oneSeq.pl -> build/bdist.linux-armv7l/wheel/h1s/bin 2020-08-23T14:15:14,934 copying build/lib/h1s/bin/Filehandler.pm -> build/bdist.linux-armv7l/wheel/h1s/bin 2020-08-23T14:15:14,938 copying build/lib/h1s/bin/__init__.py -> build/bdist.linux-armv7l/wheel/h1s/bin 2020-08-23T14:15:14,942 creating build/bdist.linux-armv7l/wheel/h1s/data 2020-08-23T14:15:14,944 copying build/lib/h1s/data/infile.fa -> build/bdist.linux-armv7l/wheel/h1s/data 2020-08-23T14:15:14,948 copying build/lib/h1s/data/__init__.py -> build/bdist.linux-armv7l/wheel/h1s/data 2020-08-23T14:15:14,952 copying build/lib/h1s/addTaxon1s.py -> build/bdist.linux-armv7l/wheel/h1s 2020-08-23T14:15:14,957 copying build/lib/h1s/checkData1s.py -> build/bdist.linux-armv7l/wheel/h1s 2020-08-23T14:15:14,963 copying build/lib/h1s/addTaxa1s.py -> build/bdist.linux-armv7l/wheel/h1s 2020-08-23T14:15:14,968 copying build/lib/h1s/__init__.py -> build/bdist.linux-armv7l/wheel/h1s 2020-08-23T14:15:14,971 copying build/lib/h1s/runOneseq.py -> build/bdist.linux-armv7l/wheel/h1s 2020-08-23T14:15:14,979 creating build/bdist.linux-armv7l/wheel/h1s/setup 2020-08-23T14:15:14,981 copying build/lib/h1s/setup/install_lib.sh -> build/bdist.linux-armv7l/wheel/h1s/setup 2020-08-23T14:15:14,986 copying build/lib/h1s/setup/setup.sh -> build/bdist.linux-armv7l/wheel/h1s/setup 2020-08-23T14:15:14,992 copying build/lib/h1s/setup/indexTaxonomy.pl -> build/bdist.linux-armv7l/wheel/h1s/setup 2020-08-23T14:15:14,996 copying build/lib/h1s/setup/__init__.py -> build/bdist.linux-armv7l/wheel/h1s/setup 2020-08-23T14:15:14,999 copying build/lib/h1s/setup/setup_conda.sh -> build/bdist.linux-armv7l/wheel/h1s/setup 2020-08-23T14:15:15,005 copying build/lib/h1s/mergeOutput1s.py -> build/bdist.linux-armv7l/wheel/h1s 2020-08-23T14:15:15,009 running install_egg_info 2020-08-23T14:15:15,046 running egg_info 2020-08-23T14:15:15,047 writing h1s.egg-info/PKG-INFO 2020-08-23T14:15:15,052 writing dependency_links to h1s.egg-info/dependency_links.txt 2020-08-23T14:15:15,056 writing entry points to h1s.egg-info/entry_points.txt 2020-08-23T14:15:15,058 writing requirements to h1s.egg-info/requires.txt 2020-08-23T14:15:15,061 writing top-level names to h1s.egg-info/top_level.txt 2020-08-23T14:15:15,073 reading manifest file 'h1s.egg-info/SOURCES.txt' 2020-08-23T14:15:15,078 reading manifest template 'MANIFEST.in' 2020-08-23T14:15:15,079 warning: no files found matching '*' under directory 'hamstr1s' 2020-08-23T14:15:15,085 writing manifest file 'h1s.egg-info/SOURCES.txt' 2020-08-23T14:15:15,089 Copying h1s.egg-info to build/bdist.linux-armv7l/wheel/h1s-2.1.7-py3.7.egg-info 2020-08-23T14:15:15,120 running install_scripts 2020-08-23T14:15:15,284 creating build/bdist.linux-armv7l/wheel/h1s-2.1.7.dist-info/WHEEL 2020-08-23T14:15:15,291 creating '/tmp/pip-wheel-r7gy479w/h1s-2.1.7-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2020-08-23T14:15:15,297 adding 'h1s/__init__.py' 2020-08-23T14:15:15,301 adding 'h1s/addTaxa1s.py' 2020-08-23T14:15:15,305 adding 'h1s/addTaxon1s.py' 2020-08-23T14:15:15,308 adding 'h1s/checkData1s.py' 2020-08-23T14:15:15,311 adding 'h1s/mergeOutput1s.py' 2020-08-23T14:15:15,314 adding 'h1s/remove1s.py' 2020-08-23T14:15:15,320 adding 'h1s/runOneseq.py' 2020-08-23T14:15:15,323 adding 'h1s/setup1s.py' 2020-08-23T14:15:15,327 adding 'h1s/bin/Filehandler.pm' 2020-08-23T14:15:15,329 adding 'h1s/bin/__init__.py' 2020-08-23T14:15:15,350 adding 'h1s/bin/hamstr.pl' 2020-08-23T14:15:15,373 adding 'h1s/bin/oneSeq.pl' 2020-08-23T14:15:15,378 adding 'h1s/bin/run_genewise_hamstr.pm' 2020-08-23T14:15:15,380 adding 'h1s/bin/translate.pl' 2020-08-23T14:15:15,384 adding 'h1s/data/__init__.py' 2020-08-23T14:15:15,387 adding 'h1s/data/infile.fa' 2020-08-23T14:15:15,390 adding 'h1s/setup/__init__.py' 2020-08-23T14:15:15,393 adding 'h1s/setup/indexTaxonomy.pl' 2020-08-23T14:15:15,396 adding 'h1s/setup/install_lib.sh' 2020-08-23T14:15:15,401 adding 'h1s/setup/setup.sh' 2020-08-23T14:15:15,405 adding 'h1s/setup/setup_conda.sh' 2020-08-23T14:15:15,411 adding 'h1s-2.1.7.dist-info/METADATA' 2020-08-23T14:15:15,413 adding 'h1s-2.1.7.dist-info/WHEEL' 2020-08-23T14:15:15,415 adding 'h1s-2.1.7.dist-info/entry_points.txt' 2020-08-23T14:15:15,417 adding 'h1s-2.1.7.dist-info/top_level.txt' 2020-08-23T14:15:15,418 adding 'h1s-2.1.7.dist-info/RECORD' 2020-08-23T14:15:15,428 removing build/bdist.linux-armv7l/wheel 2020-08-23T14:15:15,575 Building wheel for h1s (setup.py): finished with status 'done' 2020-08-23T14:15:15,581 Created wheel for h1s: filename=h1s-2.1.7-py3-none-any.whl size=90204 sha256=d89b877cadd180f2cbaaf7ee724586ce2a84bba8110c812c3d83b2010aa2e469 2020-08-23T14:15:15,582 Stored in directory: /tmp/pip-ephem-wheel-cache-a02yema5/wheels/c7/c8/19/34c9134e0a268593e47a29df3808b94b7456d5492758afd5fe 2020-08-23T14:15:15,586 Successfully built h1s 2020-08-23T14:15:15,609 Removed build tracker: '/tmp/pip-req-tracker-tqomw2k2'