2020-08-27T17:22:09,755 Created temporary directory: /tmp/pip-ephem-wheel-cache-6l_t2hm0 2020-08-27T17:22:09,759 Created temporary directory: /tmp/pip-req-tracker-7995snaj 2020-08-27T17:22:09,760 Initialized build tracking at /tmp/pip-req-tracker-7995snaj 2020-08-27T17:22:09,760 Created build tracker: /tmp/pip-req-tracker-7995snaj 2020-08-27T17:22:09,761 Entered build tracker: /tmp/pip-req-tracker-7995snaj 2020-08-27T17:22:09,762 Created temporary directory: /tmp/pip-wheel-7jesusd5 2020-08-27T17:22:09,780 1 location(s) to search for versions of h1s: 2020-08-27T17:22:09,780 * https://pypi.org/simple/h1s/ 2020-08-27T17:22:09,781 Fetching project page and analyzing links: https://pypi.org/simple/h1s/ 2020-08-27T17:22:09,782 Getting page https://pypi.org/simple/h1s/ 2020-08-27T17:22:09,784 Found index url https://pypi.org/simple 2020-08-27T17:22:10,010 Found link https://files.pythonhosted.org/packages/8c/1f/249d78d6f5c1efef2158301b18a5d076a3b2b6fbfbca27f961ffb7de3184/h1s-2.1.0-py3-none-any.whl#sha256=868cf2c9ebcf5df9d24b25259f0e91c8c26c94d8dcc7094b1cb0eaf77c6609e1 (from https://pypi.org/simple/h1s/) (requires-python:>=3.7.0), version: 2.1.0 2020-08-27T17:22:10,012 Found link https://files.pythonhosted.org/packages/e1/dd/fb8acebc191cc93610bd64b9c5de03c67577e07460f66049d7062d59b1bc/h1s-2.1.0.tar.gz#sha256=796315bbec1f23d9fe28b45bf9a36f093d2a712136232b21a115f548e5bb4ce0 (from https://pypi.org/simple/h1s/) (requires-python:>=3.7.0), version: 2.1.0 2020-08-27T17:22:10,013 Found link https://files.pythonhosted.org/packages/43/09/39ebc33aad87f168fdfdf5d0fc4b8dc4b19400900a0ac003092f9d14f896/h1s-2.1.1-py3-none-any.whl#sha256=9f82ab7d4e62a825f3fe6e2015cf82694c4b69435be5004ecbaf7cd1e4ba0290 (from https://pypi.org/simple/h1s/) (requires-python:>=3.7.0), version: 2.1.1 2020-08-27T17:22:10,015 Found link https://files.pythonhosted.org/packages/47/ec/a25cecd5fd47a86393c96c9935e7cf1b99bd16cf67c0ca9acf519562b517/h1s-2.1.1.tar.gz#sha256=2c34f87583387ad13e2366d2dfd8328010db683b0b7b7095bb7544655b845298 (from https://pypi.org/simple/h1s/) (requires-python:>=3.7.0), version: 2.1.1 2020-08-27T17:22:10,016 Found link https://files.pythonhosted.org/packages/b9/ee/06429f8e84e5a930e50ebad6023fee4154101ab9755ca0913b39256e1b35/h1s-2.1.2-py3-none-any.whl#sha256=1f6254fe5dd7474e9a6e74a357af17d5ff5d590a1e27879af5858341d37be66e (from https://pypi.org/simple/h1s/) (requires-python:>=3.7.0), version: 2.1.2 2020-08-27T17:22:10,018 Found link https://files.pythonhosted.org/packages/2f/17/e87cae27c8a233e333eddfdd27872e59fd37ea3ce7396fb7455504f20648/h1s-2.1.2.tar.gz#sha256=34da285adfa241750a3e2e9c3fa6d168aba1bbb1f4c14b9495f3af1aeaeffd01 (from https://pypi.org/simple/h1s/) (requires-python:>=3.7.0), version: 2.1.2 2020-08-27T17:22:10,019 Found link https://files.pythonhosted.org/packages/b4/dd/3cb9b23266db2155d56de3358bb4b1ffaf8fed60b3fefcc1e4c817fa3f52/h1s-2.1.3.tar.gz#sha256=fcc959747ae0f0ed263c1b18527355b54de0cf8c56ff536c6216b87bb9f046d3 (from https://pypi.org/simple/h1s/) (requires-python:>=3.7.0), version: 2.1.3 2020-08-27T17:22:10,020 Found link https://files.pythonhosted.org/packages/bc/98/448ddb840c65732768286c232af344f992d09ac08ce4dca687f060898edd/h1s-2.1.4.tar.gz#sha256=0024f80141c395f62eadbfd4751eec3e4313b79bfba19e3eb218573cfe3778a2 (from https://pypi.org/simple/h1s/) (requires-python:>=3.7.0), version: 2.1.4 2020-08-27T17:22:10,021 Found link https://files.pythonhosted.org/packages/0f/b5/fbea08c76c3ebb08f6e72ee7b46efef588261586ab9f9f663d51a7b4aa45/h1s-2.1.5.tar.gz#sha256=7c03558bff627b310632ec7da84977c8e610e52ae64b6ea10974085665ff5108 (from https://pypi.org/simple/h1s/) (requires-python:>=3.7.0), version: 2.1.5 2020-08-27T17:22:10,022 Found link https://files.pythonhosted.org/packages/c7/e0/74e2a7660bd24ea76b37cbb54353b1e37f563107edf2830be386cf378561/h1s-2.1.6.tar.gz#sha256=c423598ab7a9870c676e6e733f8e7cbf5e5599acf1bd9d966f11c9f50af34baa (from https://pypi.org/simple/h1s/) (requires-python:>=3.7.0), version: 2.1.6 2020-08-27T17:22:10,024 Found link https://files.pythonhosted.org/packages/7d/b0/38a6f12060bfe1c004712d74a924f1edcb23a98b17a23d5d2d8c2c779a73/h1s-2.1.7.tar.gz#sha256=69b4ab7869c6153acb3ee89d8fc4813d6272a4aecf2ecbbdc8b6e2d8d1d68a72 (from https://pypi.org/simple/h1s/) (requires-python:>=3.7.0), version: 2.1.7 2020-08-27T17:22:10,025 Found link https://files.pythonhosted.org/packages/93/da/38be3a20291786616b996519747338c2bdf5808c0ea4fc84e1adcb655a16/h1s-2.1.9.tar.gz#sha256=c6ea7df9ae4a353905d1e9e83a655c0eae1097fff5729dcecf35ab6f3847b8c2 (from https://pypi.org/simple/h1s/) (requires-python:>=3.7.0), version: 2.1.9 2020-08-27T17:22:10,026 Found link https://files.pythonhosted.org/packages/be/71/833712ca80c33a97cf4f412998524b04c46589a9b4151466f24e1995976a/h1s-2.2.0.tar.gz#sha256=7e381a05314291cb7f0872bf77b0b849837135f780ce543db5f3a943882dabbd (from https://pypi.org/simple/h1s/) (requires-python:>=3.7.0), version: 2.2.0 2020-08-27T17:22:10,028 Found link https://files.pythonhosted.org/packages/45/27/7cfef9d325f64fce385910898834becedc41354de56bbced5e7f2d509560/h1s-2.2.1.tar.gz#sha256=93876f86be6509e9b14776971fb1004a608933e79503705b6386e66b7b62e1e6 (from https://pypi.org/simple/h1s/) (requires-python:>=3.7.0), version: 2.2.1 2020-08-27T17:22:10,029 Found link https://files.pythonhosted.org/packages/a7/fb/3303eaaac05ff1e62c4abeb5383d82492a04f5a27c06a34c7bf4e74f8cf4/h1s-2.2.2.tar.gz#sha256=8cb5349cc75ebfdbe4b793871c9fb19962ddbd6b5b2f4860dd705551bc553a16 (from https://pypi.org/simple/h1s/) (requires-python:>=3.7.0), version: 2.2.2 2020-08-27T17:22:10,035 Given no hashes to check 1 links for project 'h1s': discarding no candidates 2020-08-27T17:22:10,036 Using version 2.2.2 (newest of versions: 2.2.2) 2020-08-27T17:22:10,043 Collecting h1s==2.2.2 2020-08-27T17:22:10,047 Created temporary directory: /tmp/pip-unpack-eiy08ede 2020-08-27T17:22:10,492 Downloading h1s-2.2.2.tar.gz (85 kB) 2020-08-27T17:22:10,763 Added h1s==2.2.2 from https://files.pythonhosted.org/packages/a7/fb/3303eaaac05ff1e62c4abeb5383d82492a04f5a27c06a34c7bf4e74f8cf4/h1s-2.2.2.tar.gz#sha256=8cb5349cc75ebfdbe4b793871c9fb19962ddbd6b5b2f4860dd705551bc553a16 to build tracker '/tmp/pip-req-tracker-7995snaj' 2020-08-27T17:22:10,765 Running setup.py (path:/tmp/pip-wheel-7jesusd5/h1s/setup.py) egg_info for package h1s 2020-08-27T17:22:10,767 Created temporary directory: /tmp/pip-pip-egg-info-7fk5jyfj 2020-08-27T17:22:10,767 Running command python setup.py egg_info 2020-08-27T17:22:12,661 running egg_info 2020-08-27T17:22:12,665 creating /tmp/pip-pip-egg-info-7fk5jyfj/h1s.egg-info 2020-08-27T17:22:12,667 writing /tmp/pip-pip-egg-info-7fk5jyfj/h1s.egg-info/PKG-INFO 2020-08-27T17:22:12,673 writing dependency_links to /tmp/pip-pip-egg-info-7fk5jyfj/h1s.egg-info/dependency_links.txt 2020-08-27T17:22:12,677 writing entry points to /tmp/pip-pip-egg-info-7fk5jyfj/h1s.egg-info/entry_points.txt 2020-08-27T17:22:12,680 writing requirements to /tmp/pip-pip-egg-info-7fk5jyfj/h1s.egg-info/requires.txt 2020-08-27T17:22:12,682 writing top-level names to /tmp/pip-pip-egg-info-7fk5jyfj/h1s.egg-info/top_level.txt 2020-08-27T17:22:12,686 writing manifest file '/tmp/pip-pip-egg-info-7fk5jyfj/h1s.egg-info/SOURCES.txt' 2020-08-27T17:22:12,987 reading manifest file '/tmp/pip-pip-egg-info-7fk5jyfj/h1s.egg-info/SOURCES.txt' 2020-08-27T17:22:12,990 reading manifest template 'MANIFEST.in' 2020-08-27T17:22:12,992 warning: no files found matching '*' under directory 'hamstr1s' 2020-08-27T17:22:12,998 writing manifest file '/tmp/pip-pip-egg-info-7fk5jyfj/h1s.egg-info/SOURCES.txt' 2020-08-27T17:22:13,117 Source in /tmp/pip-wheel-7jesusd5/h1s has version 2.2.2, which satisfies requirement h1s==2.2.2 from https://files.pythonhosted.org/packages/a7/fb/3303eaaac05ff1e62c4abeb5383d82492a04f5a27c06a34c7bf4e74f8cf4/h1s-2.2.2.tar.gz#sha256=8cb5349cc75ebfdbe4b793871c9fb19962ddbd6b5b2f4860dd705551bc553a16 2020-08-27T17:22:13,118 Removed h1s==2.2.2 from https://files.pythonhosted.org/packages/a7/fb/3303eaaac05ff1e62c4abeb5383d82492a04f5a27c06a34c7bf4e74f8cf4/h1s-2.2.2.tar.gz#sha256=8cb5349cc75ebfdbe4b793871c9fb19962ddbd6b5b2f4860dd705551bc553a16 from build tracker '/tmp/pip-req-tracker-7995snaj' 2020-08-27T17:22:13,124 Building wheels for collected packages: h1s 2020-08-27T17:22:13,132 Created temporary directory: /tmp/pip-wheel-i7zos6p6 2020-08-27T17:22:13,133 Building wheel for h1s (setup.py): started 2020-08-27T17:22:13,134 Destination directory: /tmp/pip-wheel-i7zos6p6 2020-08-27T17:22:13,134 Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-7jesusd5/h1s/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-7jesusd5/h1s/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-i7zos6p6 2020-08-27T17:22:14,989 running bdist_wheel 2020-08-27T17:22:15,002 running build 2020-08-27T17:22:15,003 running build_py 2020-08-27T17:22:15,278 creating build 2020-08-27T17:22:15,279 creating build/lib 2020-08-27T17:22:15,281 creating build/lib/h1s 2020-08-27T17:22:15,283 copying h1s/checkData1s.py -> build/lib/h1s 2020-08-27T17:22:15,289 copying h1s/h1s.py -> build/lib/h1s 2020-08-27T17:22:15,295 copying h1s/setup1s.py -> build/lib/h1s 2020-08-27T17:22:15,299 copying h1s/remove1s.py -> build/lib/h1s 2020-08-27T17:22:15,303 copying h1s/__init__.py -> build/lib/h1s 2020-08-27T17:22:15,306 copying h1s/addTaxon1s.py -> build/lib/h1s 2020-08-27T17:22:15,312 copying h1s/addTaxa1s.py -> build/lib/h1s 2020-08-27T17:22:15,317 copying h1s/mergeOutput1s.py -> build/lib/h1s 2020-08-27T17:22:15,321 copying h1s/hms.py -> build/lib/h1s 2020-08-27T17:22:15,328 creating build/lib/h1s/data 2020-08-27T17:22:15,330 copying h1s/data/__init__.py -> build/lib/h1s/data 2020-08-27T17:22:15,334 creating build/lib/h1s/setup 2020-08-27T17:22:15,337 copying h1s/setup/__init__.py -> build/lib/h1s/setup 2020-08-27T17:22:15,341 creating build/lib/h1s/bin 2020-08-27T17:22:15,343 copying h1s/bin/__init__.py -> build/lib/h1s/bin 2020-08-27T17:22:15,368 copying h1s/data/infile.fa -> build/lib/h1s/data 2020-08-27T17:22:15,373 copying h1s/setup/indexTaxonomy.pl -> build/lib/h1s/setup 2020-08-27T17:22:15,379 copying h1s/setup/setup_conda.sh -> build/lib/h1s/setup 2020-08-27T17:22:15,386 copying h1s/setup/install_lib.sh -> build/lib/h1s/setup 2020-08-27T17:22:15,391 copying h1s/setup/setup.sh -> build/lib/h1s/setup 2020-08-27T17:22:15,397 copying h1s/bin/oneSeq.pl -> build/lib/h1s/bin 2020-08-27T17:22:15,411 copying h1s/bin/translate.pl -> build/lib/h1s/bin 2020-08-27T17:22:15,417 copying h1s/bin/run_genewise_hamstr.pm -> build/lib/h1s/bin 2020-08-27T17:22:15,424 copying h1s/bin/hamstr.pl -> build/lib/h1s/bin 2020-08-27T17:22:15,437 copying h1s/bin/Filehandler.pm -> build/lib/h1s/bin 2020-08-27T17:22:15,442 copying h1s/bin/getSearchTaxa.pl -> build/lib/h1s/bin 2020-08-27T17:22:15,457 installing to build/bdist.linux-armv7l/wheel 2020-08-27T17:22:15,458 running install 2020-08-27T17:22:15,461 running install_lib 2020-08-27T17:22:15,469 creating build/bdist.linux-armv7l 2020-08-27T17:22:15,470 creating build/bdist.linux-armv7l/wheel 2020-08-27T17:22:15,475 creating build/bdist.linux-armv7l/wheel/h1s 2020-08-27T17:22:15,478 copying build/lib/h1s/checkData1s.py -> build/bdist.linux-armv7l/wheel/h1s 2020-08-27T17:22:15,485 copying build/lib/h1s/h1s.py -> build/bdist.linux-armv7l/wheel/h1s 2020-08-27T17:22:15,492 copying build/lib/h1s/setup1s.py -> build/bdist.linux-armv7l/wheel/h1s 2020-08-27T17:22:15,497 copying build/lib/h1s/remove1s.py -> build/bdist.linux-armv7l/wheel/h1s 2020-08-27T17:22:15,503 copying build/lib/h1s/__init__.py -> build/bdist.linux-armv7l/wheel/h1s 2020-08-27T17:22:15,508 creating build/bdist.linux-armv7l/wheel/h1s/data 2020-08-27T17:22:15,510 copying build/lib/h1s/data/infile.fa -> build/bdist.linux-armv7l/wheel/h1s/data 2020-08-27T17:22:15,516 copying build/lib/h1s/data/__init__.py -> build/bdist.linux-armv7l/wheel/h1s/data 2020-08-27T17:22:15,520 copying build/lib/h1s/addTaxon1s.py -> build/bdist.linux-armv7l/wheel/h1s 2020-08-27T17:22:15,526 copying build/lib/h1s/addTaxa1s.py -> build/bdist.linux-armv7l/wheel/h1s 2020-08-27T17:22:15,532 copying build/lib/h1s/mergeOutput1s.py -> build/bdist.linux-armv7l/wheel/h1s 2020-08-27T17:22:15,538 copying build/lib/h1s/hms.py -> build/bdist.linux-armv7l/wheel/h1s 2020-08-27T17:22:15,546 creating build/bdist.linux-armv7l/wheel/h1s/setup 2020-08-27T17:22:15,549 copying build/lib/h1s/setup/indexTaxonomy.pl -> build/bdist.linux-armv7l/wheel/h1s/setup 2020-08-27T17:22:15,555 copying build/lib/h1s/setup/__init__.py -> build/bdist.linux-armv7l/wheel/h1s/setup 2020-08-27T17:22:15,559 copying build/lib/h1s/setup/setup_conda.sh -> build/bdist.linux-armv7l/wheel/h1s/setup 2020-08-27T17:22:15,566 copying build/lib/h1s/setup/install_lib.sh -> build/bdist.linux-armv7l/wheel/h1s/setup 2020-08-27T17:22:15,571 copying build/lib/h1s/setup/setup.sh -> build/bdist.linux-armv7l/wheel/h1s/setup 2020-08-27T17:22:15,579 creating build/bdist.linux-armv7l/wheel/h1s/bin 2020-08-27T17:22:15,581 copying build/lib/h1s/bin/oneSeq.pl -> build/bdist.linux-armv7l/wheel/h1s/bin 2020-08-27T17:22:15,595 copying build/lib/h1s/bin/translate.pl -> build/bdist.linux-armv7l/wheel/h1s/bin 2020-08-27T17:22:15,601 copying build/lib/h1s/bin/run_genewise_hamstr.pm -> build/bdist.linux-armv7l/wheel/h1s/bin 2020-08-27T17:22:15,607 copying build/lib/h1s/bin/__init__.py -> build/bdist.linux-armv7l/wheel/h1s/bin 2020-08-27T17:22:15,612 copying build/lib/h1s/bin/hamstr.pl -> build/bdist.linux-armv7l/wheel/h1s/bin 2020-08-27T17:22:15,625 copying build/lib/h1s/bin/Filehandler.pm -> build/bdist.linux-armv7l/wheel/h1s/bin 2020-08-27T17:22:15,630 copying build/lib/h1s/bin/getSearchTaxa.pl -> build/bdist.linux-armv7l/wheel/h1s/bin 2020-08-27T17:22:15,635 running install_egg_info 2020-08-27T17:22:15,673 running egg_info 2020-08-27T17:22:15,675 writing h1s.egg-info/PKG-INFO 2020-08-27T17:22:15,681 writing dependency_links to h1s.egg-info/dependency_links.txt 2020-08-27T17:22:15,686 writing entry points to h1s.egg-info/entry_points.txt 2020-08-27T17:22:15,689 writing requirements to h1s.egg-info/requires.txt 2020-08-27T17:22:15,692 writing top-level names to h1s.egg-info/top_level.txt 2020-08-27T17:22:15,706 reading manifest file 'h1s.egg-info/SOURCES.txt' 2020-08-27T17:22:15,711 reading manifest template 'MANIFEST.in' 2020-08-27T17:22:15,713 warning: no files found matching '*' under directory 'hamstr1s' 2020-08-27T17:22:15,720 writing manifest file 'h1s.egg-info/SOURCES.txt' 2020-08-27T17:22:15,724 Copying h1s.egg-info to build/bdist.linux-armv7l/wheel/h1s-2.2.2-py3.7.egg-info 2020-08-27T17:22:15,755 running install_scripts 2020-08-27T17:22:15,914 creating build/bdist.linux-armv7l/wheel/h1s-2.2.2.dist-info/WHEEL 2020-08-27T17:22:15,920 creating '/tmp/pip-wheel-i7zos6p6/h1s-2.2.2-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2020-08-27T17:22:15,927 adding 'h1s/__init__.py' 2020-08-27T17:22:15,931 adding 'h1s/addTaxa1s.py' 2020-08-27T17:22:15,935 adding 'h1s/addTaxon1s.py' 2020-08-27T17:22:15,940 adding 'h1s/checkData1s.py' 2020-08-27T17:22:15,945 adding 'h1s/h1s.py' 2020-08-27T17:22:15,951 adding 'h1s/hms.py' 2020-08-27T17:22:15,955 adding 'h1s/mergeOutput1s.py' 2020-08-27T17:22:15,958 adding 'h1s/remove1s.py' 2020-08-27T17:22:15,962 adding 'h1s/setup1s.py' 2020-08-27T17:22:15,966 adding 'h1s/bin/Filehandler.pm' 2020-08-27T17:22:15,969 adding 'h1s/bin/__init__.py' 2020-08-27T17:22:15,972 adding 'h1s/bin/getSearchTaxa.pl' 2020-08-27T17:22:15,993 adding 'h1s/bin/hamstr.pl' 2020-08-27T17:22:16,016 adding 'h1s/bin/oneSeq.pl' 2020-08-27T17:22:16,021 adding 'h1s/bin/run_genewise_hamstr.pm' 2020-08-27T17:22:16,025 adding 'h1s/bin/translate.pl' 2020-08-27T17:22:16,029 adding 'h1s/data/__init__.py' 2020-08-27T17:22:16,032 adding 'h1s/data/infile.fa' 2020-08-27T17:22:16,036 adding 'h1s/setup/__init__.py' 2020-08-27T17:22:16,039 adding 'h1s/setup/indexTaxonomy.pl' 2020-08-27T17:22:16,043 adding 'h1s/setup/install_lib.sh' 2020-08-27T17:22:16,047 adding 'h1s/setup/setup.sh' 2020-08-27T17:22:16,052 adding 'h1s/setup/setup_conda.sh' 2020-08-27T17:22:16,058 adding 'h1s-2.2.2.dist-info/METADATA' 2020-08-27T17:22:16,060 adding 'h1s-2.2.2.dist-info/WHEEL' 2020-08-27T17:22:16,063 adding 'h1s-2.2.2.dist-info/entry_points.txt' 2020-08-27T17:22:16,066 adding 'h1s-2.2.2.dist-info/top_level.txt' 2020-08-27T17:22:16,067 adding 'h1s-2.2.2.dist-info/RECORD' 2020-08-27T17:22:16,079 removing build/bdist.linux-armv7l/wheel 2020-08-27T17:22:16,229 Building wheel for h1s (setup.py): finished with status 'done' 2020-08-27T17:22:16,235 Created wheel for h1s: filename=h1s-2.2.2-py3-none-any.whl size=97628 sha256=1797828e634f3e45eebffe85bebbe61e22f8f6a2ba5a3749d23e8c637ee79271 2020-08-27T17:22:16,235 Stored in directory: /tmp/pip-ephem-wheel-cache-6l_t2hm0/wheels/07/87/cd/6b3f4f6bdf854fa002cda7675937fc9f17eb6aa345df4004e7 2020-08-27T17:22:16,239 Successfully built h1s 2020-08-27T17:22:16,628 Removed build tracker: '/tmp/pip-req-tracker-7995snaj'