2020-09-04T10:53:30,394 Created temporary directory: /tmp/pip-ephem-wheel-cache-onybfdhj
2020-09-04T10:53:30,400 Created temporary directory: /tmp/pip-req-tracker-olv2sujs
2020-09-04T10:53:30,401 Initialized build tracking at /tmp/pip-req-tracker-olv2sujs
2020-09-04T10:53:30,402 Created build tracker: /tmp/pip-req-tracker-olv2sujs
2020-09-04T10:53:30,402 Entered build tracker: /tmp/pip-req-tracker-olv2sujs
2020-09-04T10:53:30,404 Created temporary directory: /tmp/pip-wheel-iparct02
2020-09-04T10:53:30,424 1 location(s) to search for versions of ont-bonito:
2020-09-04T10:53:30,424 * https://pypi.org/simple/ont-bonito/
2020-09-04T10:53:30,425 Fetching project page and analyzing links: https://pypi.org/simple/ont-bonito/
2020-09-04T10:53:30,427 Getting page https://pypi.org/simple/ont-bonito/
2020-09-04T10:53:30,431 Found index url https://pypi.org/simple
2020-09-04T10:53:30,763   Found link https://files.pythonhosted.org/packages/d9/db/561675d546075abac5f22cd30a78c084af0cf6aa376ace242405b801658f/ont-bonito-0.0.1.tar.gz#sha256=fd80e965c675250aa25d00121f9eb0787e3a878caecfd1946b9596c17f3dabfe (from https://pypi.org/simple/ont-bonito/), version: 0.0.1
2020-09-04T10:53:30,764   Found link https://files.pythonhosted.org/packages/1e/d1/8e91e83711e166c9da2dd39017c9ac471c516b87b48bcdc0e25a4cb12d95/ont-bonito-0.0.3.tar.gz#sha256=63095382dbacb5c9a4cdb68f44433d577875a92f94d70eda07e11124f218fe95 (from https://pypi.org/simple/ont-bonito/), version: 0.0.3
2020-09-04T10:53:30,765   Found link https://files.pythonhosted.org/packages/e6/97/ee764ddc586c5fcf9be804289a26d80ce31a1eabfd550b1276dead9b9de1/ont-bonito-0.0.4.tar.gz#sha256=1e0f833fc6a7fdcb64ffb344da6cf77bfdf283bcfe1c1e7e98d3e8c28f0adf62 (from https://pypi.org/simple/ont-bonito/), version: 0.0.4
2020-09-04T10:53:30,766   Found link https://files.pythonhosted.org/packages/51/2a/771af15029be16025022b91ee7675af7945fc0350e3c1190c7d1cad934d3/ont-bonito-0.0.5.tar.gz#sha256=a735e7998bad0e920a0ace486c92bc6628aff263b374267cf7ac6cba8b75c1fa (from https://pypi.org/simple/ont-bonito/), version: 0.0.5
2020-09-04T10:53:30,767   Found link https://files.pythonhosted.org/packages/60/99/f9b4e7db2b81d07ca49873fef96a1d3378248ee8730cf07fda1231cd8910/ont-bonito-0.0.7.tar.gz#sha256=a0d0edc70b6ae0f6e0153697a8fcb8237f0b4c4067e504ded202ed33b9bd6e54 (from https://pypi.org/simple/ont-bonito/), version: 0.0.7
2020-09-04T10:53:30,768   Found link https://files.pythonhosted.org/packages/3a/cc/a64e90955addd8b831e43decc9ee2cd8f8395c7c44ceef250bc60f2550f8/ont-bonito-0.0.8.tar.gz#sha256=8ee2c91f073ac448b2a330e12a4d922280e596b15e40170cd15b4f612ace7c53 (from https://pypi.org/simple/ont-bonito/), version: 0.0.8
2020-09-04T10:53:30,769   Found link https://files.pythonhosted.org/packages/29/db/59fef46c323e86347b7558ad3c5a775037ef6923bc62b7e15173fefeed82/ont-bonito-0.1.0.tar.gz#sha256=0098ce0cb09f022b7df4534dc7ba7f09cf4b30e358778fbed4adb200966e453d (from https://pypi.org/simple/ont-bonito/), version: 0.1.0
2020-09-04T10:53:30,769   Found link https://files.pythonhosted.org/packages/78/52/9f978f27aa96ccbb07ed86f25d599c28c80f41f6414f8035372e7acc00f6/ont-bonito-0.1.2.tar.gz#sha256=eb2b8ef67dd3c28f2ff44b5ec62c57964eb0114bcab32350cb720253a083c8e9 (from https://pypi.org/simple/ont-bonito/), version: 0.1.2
2020-09-04T10:53:30,770   Found link https://files.pythonhosted.org/packages/9c/53/044d2ab2e0d2c00f5331aa4f1623c888dbc818c7fba70d069d80529ed113/ont-bonito-0.1.3.tar.gz#sha256=23f9e99bf21d61e6586037be15d2dfefb4af5277612ae3f07ac91a3cec27ce10 (from https://pypi.org/simple/ont-bonito/), version: 0.1.3
2020-09-04T10:53:30,771   Found link https://files.pythonhosted.org/packages/59/8d/0c2eb31f833160e51648eae8d49bd6610bd6fad6ae5879e22a76187b5979/ont-bonito-0.1.4.tar.gz#sha256=3fc8df5ca099607eaabd745afd2de156d981b24f22e8b54ccaf53661b3dbb274 (from https://pypi.org/simple/ont-bonito/), version: 0.1.4
2020-09-04T10:53:30,772   Found link https://files.pythonhosted.org/packages/95/fa/8a178168ee44c7f66a4239e4a2a1569896e787397080d1e1e0c2b1a331c2/ont-bonito-0.1.5.tar.gz#sha256=4482aca7dfc73884df0fca6fb1310aa71edd1f927f4072c17ffb957b076594a0 (from https://pypi.org/simple/ont-bonito/), version: 0.1.5
2020-09-04T10:53:30,773   Found link https://files.pythonhosted.org/packages/43/3a/37759ab5cca2b641f6e8000ad79cf4c86708efd3a1a1cafd4112ca7abcc7/ont-bonito-0.2.0a1.tar.gz#sha256=76b6146a69086dbe22e48fe2585aba6908d7cccd692c547e76da22ca2e0dccbd (from https://pypi.org/simple/ont-bonito/), version: 0.2.0a1
2020-09-04T10:53:30,774   Found link https://files.pythonhosted.org/packages/9f/92/8bc665b17c156ddd88ca5d5aab8a0df099ffb508068ca6b773aa5695973b/ont-bonito-0.2.0.tar.gz#sha256=ad2fbe726985caa7553ea3900d83bcf498b5ce56cb9d35959a619a25ee574877 (from https://pypi.org/simple/ont-bonito/), version: 0.2.0
2020-09-04T10:53:30,775   Found link https://files.pythonhosted.org/packages/41/fc/a2d21c9eeca274194294321505035094e407f3eed3466a831eb6de657912/ont-bonito-0.2.1a0.tar.gz#sha256=ff4517fd925e8328c860fdb2844a047bacf8bb623bc161c10e18b87f2c7159f1 (from https://pypi.org/simple/ont-bonito/), version: 0.2.1a0
2020-09-04T10:53:30,776   Found link https://files.pythonhosted.org/packages/8d/1e/b5ea1a1ddcd184c797ebfe251ecbf23fa97850515acc175c8671d1f425d2/ont-bonito-0.2.1.tar.gz#sha256=248709e6308e8ac5f9e1c2e1e1ffc080fe1cd1a9f6095bd86f8768ec93b11978 (from https://pypi.org/simple/ont-bonito/), version: 0.2.1
2020-09-04T10:53:30,777   Found link https://files.pythonhosted.org/packages/9b/3f/5cc8fa4703f5322956fff3d14c50d10a4bc46cd116bb77afc107f9213377/ont-bonito-0.2.2a0.tar.gz#sha256=051c525e9bd8bcaa9530493973ce41e22a1e1e6a88255645b1b70ec61796377e (from https://pypi.org/simple/ont-bonito/), version: 0.2.2a0
2020-09-04T10:53:30,778   Found link https://files.pythonhosted.org/packages/b4/38/79e98f2506fd0152989541ca93f25838e4017526c54e2b9b57df806ab28e/ont-bonito-0.2.2.tar.gz#sha256=002bb5c9ecc57251c963904bf1a695de77e5bc42d7de3623909736b9a727def7 (from https://pypi.org/simple/ont-bonito/), version: 0.2.2
2020-09-04T10:53:30,779   Found link https://files.pythonhosted.org/packages/7b/5c/c58113d696ef7b470cae9308134d039a156de85bca856fab94f2024e5e7c/ont-bonito-0.2.3a0.tar.gz#sha256=1021a50ab5ded8e0a8ee4cb91dd12b69a5a4b2ec27866bd3aad0d51c59e89ce0 (from https://pypi.org/simple/ont-bonito/), version: 0.2.3a0
2020-09-04T10:53:30,796 Given no hashes to check 1 links for project 'ont-bonito': discarding no candidates
2020-09-04T10:53:30,798 Using version 0.2.3a0 (newest of versions: 0.2.3a0)
2020-09-04T10:53:30,807 Collecting ont-bonito==0.2.3a0
2020-09-04T10:53:30,812   Created temporary directory: /tmp/pip-unpack-atq6ad78
2020-09-04T10:53:31,970   Downloading ont-bonito-0.2.3a0.tar.gz (24.9 MB)
2020-09-04T10:53:41,664   Added ont-bonito==0.2.3a0 from https://files.pythonhosted.org/packages/7b/5c/c58113d696ef7b470cae9308134d039a156de85bca856fab94f2024e5e7c/ont-bonito-0.2.3a0.tar.gz#sha256=1021a50ab5ded8e0a8ee4cb91dd12b69a5a4b2ec27866bd3aad0d51c59e89ce0 to build tracker '/tmp/pip-req-tracker-olv2sujs'
2020-09-04T10:53:41,668     Running setup.py (path:/tmp/pip-wheel-iparct02/ont-bonito/setup.py) egg_info for package ont-bonito
2020-09-04T10:53:41,671     Created temporary directory: /tmp/pip-pip-egg-info-bhgrt2ue
2020-09-04T10:53:41,672     Running command python setup.py egg_info
2020-09-04T10:53:43,859     running egg_info
2020-09-04T10:53:43,866     creating /tmp/pip-pip-egg-info-bhgrt2ue/ont_bonito.egg-info
2020-09-04T10:53:43,868     writing requirements to /tmp/pip-pip-egg-info-bhgrt2ue/ont_bonito.egg-info/requires.txt
2020-09-04T10:53:43,872     writing dependency_links to /tmp/pip-pip-egg-info-bhgrt2ue/ont_bonito.egg-info/dependency_links.txt
2020-09-04T10:53:43,874     writing top-level names to /tmp/pip-pip-egg-info-bhgrt2ue/ont_bonito.egg-info/top_level.txt
2020-09-04T10:53:43,876     writing /tmp/pip-pip-egg-info-bhgrt2ue/ont_bonito.egg-info/PKG-INFO
2020-09-04T10:53:43,882     writing entry points to /tmp/pip-pip-egg-info-bhgrt2ue/ont_bonito.egg-info/entry_points.txt
2020-09-04T10:53:43,886     writing manifest file '/tmp/pip-pip-egg-info-bhgrt2ue/ont_bonito.egg-info/SOURCES.txt'
2020-09-04T10:53:44,240     reading manifest file '/tmp/pip-pip-egg-info-bhgrt2ue/ont_bonito.egg-info/SOURCES.txt'
2020-09-04T10:53:44,243     reading manifest template 'MANIFEST.in'
2020-09-04T10:53:44,255     writing manifest file '/tmp/pip-pip-egg-info-bhgrt2ue/ont_bonito.egg-info/SOURCES.txt'
2020-09-04T10:53:44,394   Source in /tmp/pip-wheel-iparct02/ont-bonito has version 0.2.3a0, which satisfies requirement ont-bonito==0.2.3a0 from https://files.pythonhosted.org/packages/7b/5c/c58113d696ef7b470cae9308134d039a156de85bca856fab94f2024e5e7c/ont-bonito-0.2.3a0.tar.gz#sha256=1021a50ab5ded8e0a8ee4cb91dd12b69a5a4b2ec27866bd3aad0d51c59e89ce0
2020-09-04T10:53:44,396   Removed ont-bonito==0.2.3a0 from https://files.pythonhosted.org/packages/7b/5c/c58113d696ef7b470cae9308134d039a156de85bca856fab94f2024e5e7c/ont-bonito-0.2.3a0.tar.gz#sha256=1021a50ab5ded8e0a8ee4cb91dd12b69a5a4b2ec27866bd3aad0d51c59e89ce0 from build tracker '/tmp/pip-req-tracker-olv2sujs'
2020-09-04T10:53:44,401 Building wheels for collected packages: ont-bonito
2020-09-04T10:53:44,410   Created temporary directory: /tmp/pip-wheel-qibw7stg
2020-09-04T10:53:44,411   Building wheel for ont-bonito (setup.py): started
2020-09-04T10:53:44,412   Destination directory: /tmp/pip-wheel-qibw7stg
2020-09-04T10:53:44,413   Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-iparct02/ont-bonito/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-iparct02/ont-bonito/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-qibw7stg
2020-09-04T10:53:46,626   running bdist_wheel
2020-09-04T10:53:46,641   running build
2020-09-04T10:53:46,642   running build_py
2020-09-04T10:53:46,982   creating build
2020-09-04T10:53:46,983   creating build/lib
2020-09-04T10:53:46,985   creating build/lib/bonito
2020-09-04T10:53:46,988   copying bonito/convert.py -> build/lib/bonito
2020-09-04T10:53:46,993   copying bonito/train.py -> build/lib/bonito
2020-09-04T10:53:46,998   copying bonito/view.py -> build/lib/bonito
2020-09-04T10:53:47,003   copying bonito/training.py -> build/lib/bonito
2020-09-04T10:53:47,009   copying bonito/io.py -> build/lib/bonito
2020-09-04T10:53:47,016   copying bonito/tune.py -> build/lib/bonito
2020-09-04T10:53:47,022   copying bonito/__init__.py -> build/lib/bonito
2020-09-04T10:53:47,026   copying bonito/util.py -> build/lib/bonito
2020-09-04T10:53:47,032   copying bonito/evaluate.py -> build/lib/bonito
2020-09-04T10:53:47,036   copying bonito/model.py -> build/lib/bonito
2020-09-04T10:53:47,041   copying bonito/download.py -> build/lib/bonito
2020-09-04T10:53:47,046   copying bonito/basecaller.py -> build/lib/bonito
2020-09-04T10:53:47,051   copying bonito/pair.py -> build/lib/bonito
2020-09-04T10:53:47,057   running egg_info
2020-09-04T10:53:47,090   writing top-level names to ont_bonito.egg-info/top_level.txt
2020-09-04T10:53:47,092   writing dependency_links to ont_bonito.egg-info/dependency_links.txt
2020-09-04T10:53:47,094   writing ont_bonito.egg-info/PKG-INFO
2020-09-04T10:53:47,100   writing requirements to ont_bonito.egg-info/requires.txt
2020-09-04T10:53:47,103   writing entry points to ont_bonito.egg-info/entry_points.txt
2020-09-04T10:53:47,113   reading manifest file 'ont_bonito.egg-info/SOURCES.txt'
2020-09-04T10:53:47,118   reading manifest template 'MANIFEST.in'
2020-09-04T10:53:47,129   writing manifest file 'ont_bonito.egg-info/SOURCES.txt'
2020-09-04T10:53:47,135   creating build/lib/bonito/data
2020-09-04T10:53:47,137   copying bonito/data/README.md -> build/lib/bonito/data
2020-09-04T10:53:47,141   creating build/lib/bonito/models
2020-09-04T10:53:47,142   creating build/lib/bonito/models/configs
2020-09-04T10:53:47,145   copying bonito/models/configs/dna_r9.4.1.toml -> build/lib/bonito/models/configs
2020-09-04T10:53:47,150   copying bonito/models/configs/quartznet5x5.toml -> build/lib/bonito/models/configs
2020-09-04T10:53:47,156   creating build/lib/bonito/models/dna_r9.4.1
2020-09-04T10:53:47,159   copying bonito/models/dna_r9.4.1/config.toml -> build/lib/bonito/models/dna_r9.4.1
2020-09-04T10:53:47,166   copying bonito/models/dna_r9.4.1/weights_1.tar -> build/lib/bonito/models/dna_r9.4.1
2020-09-04T10:53:49,629   installing to build/bdist.linux-armv7l/wheel
2020-09-04T10:53:49,630   running install
2020-09-04T10:53:49,632   running install_lib
2020-09-04T10:53:49,640   creating build/bdist.linux-armv7l
2020-09-04T10:53:49,640   creating build/bdist.linux-armv7l/wheel
2020-09-04T10:53:49,645   creating build/bdist.linux-armv7l/wheel/bonito
2020-09-04T10:53:49,648   creating build/bdist.linux-armv7l/wheel/bonito/data
2020-09-04T10:53:49,650   copying build/lib/bonito/data/README.md -> build/bdist.linux-armv7l/wheel/bonito/data
2020-09-04T10:53:49,655   copying build/lib/bonito/convert.py -> build/bdist.linux-armv7l/wheel/bonito
2020-09-04T10:53:49,659   copying build/lib/bonito/train.py -> build/bdist.linux-armv7l/wheel/bonito
2020-09-04T10:53:49,664   copying build/lib/bonito/view.py -> build/bdist.linux-armv7l/wheel/bonito
2020-09-04T10:53:49,669   copying build/lib/bonito/training.py -> build/bdist.linux-armv7l/wheel/bonito
2020-09-04T10:53:49,677   creating build/bdist.linux-armv7l/wheel/bonito/models
2020-09-04T10:53:49,681   creating build/bdist.linux-armv7l/wheel/bonito/models/configs
2020-09-04T10:53:49,684   copying build/lib/bonito/models/configs/quartznet5x5.toml -> build/bdist.linux-armv7l/wheel/bonito/models/configs
2020-09-04T10:53:49,690   copying build/lib/bonito/models/configs/dna_r9.4.1.toml -> build/bdist.linux-armv7l/wheel/bonito/models/configs
2020-09-04T10:53:49,698   creating build/bdist.linux-armv7l/wheel/bonito/models/dna_r9.4.1
2020-09-04T10:53:49,700   copying build/lib/bonito/models/dna_r9.4.1/weights_1.tar -> build/bdist.linux-armv7l/wheel/bonito/models/dna_r9.4.1
2020-09-04T10:53:52,156   copying build/lib/bonito/models/dna_r9.4.1/config.toml -> build/bdist.linux-armv7l/wheel/bonito/models/dna_r9.4.1
2020-09-04T10:53:52,160   copying build/lib/bonito/io.py -> build/bdist.linux-armv7l/wheel/bonito
2020-09-04T10:53:52,166   copying build/lib/bonito/tune.py -> build/bdist.linux-armv7l/wheel/bonito
2020-09-04T10:53:52,171   copying build/lib/bonito/__init__.py -> build/bdist.linux-armv7l/wheel/bonito
2020-09-04T10:53:52,176   copying build/lib/bonito/util.py -> build/bdist.linux-armv7l/wheel/bonito
2020-09-04T10:53:52,183   copying build/lib/bonito/evaluate.py -> build/bdist.linux-armv7l/wheel/bonito
2020-09-04T10:53:52,189   copying build/lib/bonito/model.py -> build/bdist.linux-armv7l/wheel/bonito
2020-09-04T10:53:52,196   copying build/lib/bonito/download.py -> build/bdist.linux-armv7l/wheel/bonito
2020-09-04T10:53:52,202   copying build/lib/bonito/basecaller.py -> build/bdist.linux-armv7l/wheel/bonito
2020-09-04T10:53:52,208   copying build/lib/bonito/pair.py -> build/bdist.linux-armv7l/wheel/bonito
2020-09-04T10:53:52,214   running install_egg_info
2020-09-04T10:53:52,242   Copying ont_bonito.egg-info to build/bdist.linux-armv7l/wheel/ont_bonito-0.2.3a0-py3.5.egg-info
2020-09-04T10:53:52,276   running install_scripts
2020-09-04T10:53:52,501   creating build/bdist.linux-armv7l/wheel/ont_bonito-0.2.3a0.dist-info/WHEEL
2020-09-04T10:54:01,741   Building wheel for ont-bonito (setup.py): finished with status 'done'
2020-09-04T10:54:02,165   Created wheel for ont-bonito: filename=ont_bonito-0.2.3a0-py3-none-any.whl size=24900932 sha256=3f6cfda8101ae11440f5416df9056a109d43edf85bb04d21acf4b516c931f0d8
2020-09-04T10:54:02,166   Stored in directory: /tmp/pip-ephem-wheel-cache-onybfdhj/wheels/8b/73/e5/eca610f3b02bdc93ebafda302729af6fd9508c883e6e219507
2020-09-04T10:54:02,171 Successfully built ont-bonito
2020-09-04T10:54:06,488 Removed build tracker: '/tmp/pip-req-tracker-olv2sujs'