2020-09-10T17:22:27,478 Created temporary directory: /tmp/pip-ephem-wheel-cache-fbpev0lx 2020-09-10T17:22:27,483 Created temporary directory: /tmp/pip-req-tracker-5kfnjybu 2020-09-10T17:22:27,484 Initialized build tracking at /tmp/pip-req-tracker-5kfnjybu 2020-09-10T17:22:27,485 Created build tracker: /tmp/pip-req-tracker-5kfnjybu 2020-09-10T17:22:27,485 Entered build tracker: /tmp/pip-req-tracker-5kfnjybu 2020-09-10T17:22:27,486 Created temporary directory: /tmp/pip-wheel-ml8fqr5o 2020-09-10T17:22:27,500 1 location(s) to search for versions of gffutils: 2020-09-10T17:22:27,500 * https://pypi.org/simple/gffutils/ 2020-09-10T17:22:27,501 Fetching project page and analyzing links: https://pypi.org/simple/gffutils/ 2020-09-10T17:22:27,503 Getting page https://pypi.org/simple/gffutils/ 2020-09-10T17:22:27,507 Found index url https://pypi.org/simple 2020-09-10T17:22:27,807 Found link https://files.pythonhosted.org/packages/d9/a5/3d6f46b049c1091efcc6f6d29e9d39470f5f8d62e17cdb6fd331526fd71b/gffutils-0.0.0.tar.gz#sha256=e02b331fdfcbc6095b53126281c7591fc82bdd44ebedee4b6bff4910e8e29883 (from https://pypi.org/simple/gffutils/), version: 0.0.0 2020-09-10T17:22:27,808 Found link https://files.pythonhosted.org/packages/86/64/6dab23af4bfb4052c66a8f1f174c95d59f8e797220bfe19dfd11122538d9/gffutils-0.7.tar.gz#sha256=1e03365ed45a1dafb8ff750a562930872dc09cdd86603e3f34c81a4183571546 (from https://pypi.org/simple/gffutils/), version: 0.7 2020-09-10T17:22:27,809 Found link https://files.pythonhosted.org/packages/f9/6a/b2cf512d0772c220431fbab8465abdb2d730bd6ac22a6816e023afa675b8/gffutils-0.8.tar.gz#sha256=5eda5e365352b3c7f84fe6cff4b4f69a2c8d7ba6ea5403d53e1bb7718cd3c13f (from https://pypi.org/simple/gffutils/), version: 0.8 2020-09-10T17:22:27,810 Found link https://files.pythonhosted.org/packages/07/52/5d10ce38562ed0b8468697e09f8898b45df543d5e9fe5b6c5a4a5aca6685/gffutils-0.8.1.tar.gz#sha256=1994525e35cbf32d1a5679e9bf708b84778fb760d7889c917dd7cb571bb06ff4 (from https://pypi.org/simple/gffutils/), version: 0.8.1 2020-09-10T17:22:27,811 Found link https://files.pythonhosted.org/packages/eb/89/e2e0c90b9be07b3ab650b7474971fbf0b1e5d4d29a2b03c676ffad9501bb/gffutils-0.8.2.tar.gz#sha256=fc85976687bb8ff6742daebd7e3d3fcbf47bfda4ab8ef7e02c8b155b733ba8ac (from https://pypi.org/simple/gffutils/), version: 0.8.2 2020-09-10T17:22:27,811 Found link https://files.pythonhosted.org/packages/3e/2b/1a5d72b043c024b86d573ceab15b464acd0638b912cd30ddce71e7d93112/gffutils-0.8.3.tar.gz#sha256=9f28733ed6f9603817691c0ac14078792f7f853054ee90bc401320a495d218f2 (from https://pypi.org/simple/gffutils/), version: 0.8.3 2020-09-10T17:22:27,812 Found link https://files.pythonhosted.org/packages/8d/00/6f4f59d109bbc421ad59faf64eb31cb90858a4a316c31eb49e09467f4a93/gffutils-0.8.3.1.tar.gz#sha256=6939ff831bb2e6a33a2c99d4c57ce64b1c517ca56be3014b4171d45a86964508 (from https://pypi.org/simple/gffutils/), version: 0.8.3.1 2020-09-10T17:22:27,813 Found link https://files.pythonhosted.org/packages/d8/a3/487db49cf8b35dd17d6360f464d3524b369365e5bd7964ac32b33a6fabab/gffutils-0.8.4rc1.tar.gz#sha256=63d3ec216bb395ff8d9f9033f8aa83f82130e4ef229273e37beb1034580da666 (from https://pypi.org/simple/gffutils/), version: 0.8.4rc1 2020-09-10T17:22:27,814 Found link https://files.pythonhosted.org/packages/25/9d/97c58a9a602e41e2797747fd94b6bd4aa82331178a074c4da966030045ba/gffutils-0.8.5.tar.gz#sha256=c5acd59c55662fe082fa78bc5d5ae383e73040f7610ef8d45b8bd62d9fae74d8 (from https://pypi.org/simple/gffutils/), version: 0.8.5 2020-09-10T17:22:27,814 Found link https://files.pythonhosted.org/packages/21/b1/0ecce3b0304048241da7e830196aa50d62dfe9c9bdbf4fb48aebbf1d363e/gffutils-0.8.6.tar.gz#sha256=6cdfb77b57ef22b5971e5d876bcc89e05a5e6194589d1e283b5e9d6df83fff46 (from https://pypi.org/simple/gffutils/), version: 0.8.6 2020-09-10T17:22:27,815 Found link https://files.pythonhosted.org/packages/40/bc/85541d291c6da6570deed2988206bb322afb8d5ede1e72fd267c440a286d/gffutils-0.8.6.1.tar.gz#sha256=e421a06ef916041946f6b1dc3ae85776524c6bc3578bdbdda5f7e98d8a3d8db4 (from https://pypi.org/simple/gffutils/), version: 0.8.6.1 2020-09-10T17:22:27,816 Found link https://files.pythonhosted.org/packages/d8/bf/b630f9a006d7380d79b344b41af548c73371844737f221a9d4a59d57f91e/gffutils-0.8.7.tar.gz#sha256=4fb2c95dbf7f98e537d00995eb7aa6bf36ee70fd9a707aa3df2202c898d54c01 (from https://pypi.org/simple/gffutils/), version: 0.8.7 2020-09-10T17:22:27,817 Found link https://files.pythonhosted.org/packages/a7/fa/3d8cd13f58540098f5efb3ec7dd33d1bb6a27ee06e377e1d6a2419b4be25/gffutils-0.8.7.1.tar.gz#sha256=0fd612cdf37b9aeb0d3504bd45acde1b00574554b84095a683688595337e94e6 (from https://pypi.org/simple/gffutils/), version: 0.8.7.1 2020-09-10T17:22:27,818 Found link https://files.pythonhosted.org/packages/b4/ea/54ca403a8d471849606fb432b9afcf73c8c5105ea2dd87b8d38bd5217c5a/gffutils-0.9.tar.gz#sha256=e1b0bf2b422ec3491be13d77bf7baf71d274abd844e8f8b6c1217a95b236218b (from https://pypi.org/simple/gffutils/), version: 0.9 2020-09-10T17:22:27,818 Found link https://files.pythonhosted.org/packages/f0/cb/bbbde7e179aa5efe13f51afbef13a85a53632d94fc97755a2819d4d251c6/gffutils-0.10.tar.gz#sha256=9b1f5f30d93754e8c67503b94878dbd7d113a5acf8d04c4c363aa8a78a506b2d (from https://pypi.org/simple/gffutils/), version: 0.10 2020-09-10T17:22:27,819 Found link https://files.pythonhosted.org/packages/87/d6/f893f14fd6cf1c9e758259f6e0f9ba1ae03370988d8f1a3ea8d790ca5b06/gffutils-0.10.1.tar.gz#sha256=a8fc39006d7aa353147238160640e2210b168f7849cb99896be3fc9441e351cb (from https://pypi.org/simple/gffutils/), version: 0.10.1 2020-09-10T17:22:27,833 Given no hashes to check 1 links for project 'gffutils': discarding no candidates 2020-09-10T17:22:27,834 Using version 0.8.5 (newest of versions: 0.8.5) 2020-09-10T17:22:27,842 Collecting gffutils==0.8.5 2020-09-10T17:22:27,846 Created temporary directory: /tmp/pip-unpack-m8uli1ty 2020-09-10T17:22:28,401 Downloading gffutils-0.8.5.tar.gz (1.5 MB) 2020-09-10T17:22:29,651 Added gffutils==0.8.5 from https://files.pythonhosted.org/packages/25/9d/97c58a9a602e41e2797747fd94b6bd4aa82331178a074c4da966030045ba/gffutils-0.8.5.tar.gz#sha256=c5acd59c55662fe082fa78bc5d5ae383e73040f7610ef8d45b8bd62d9fae74d8 to build tracker '/tmp/pip-req-tracker-5kfnjybu' 2020-09-10T17:22:29,653 Running setup.py (path:/tmp/pip-wheel-ml8fqr5o/gffutils/setup.py) egg_info for package gffutils 2020-09-10T17:22:29,654 Created temporary directory: /tmp/pip-pip-egg-info-0caq2c3i 2020-09-10T17:22:29,655 Running command python setup.py egg_info 2020-09-10T17:22:31,491 running egg_info 2020-09-10T17:22:31,496 creating /tmp/pip-pip-egg-info-0caq2c3i/gffutils.egg-info 2020-09-10T17:22:31,497 writing /tmp/pip-pip-egg-info-0caq2c3i/gffutils.egg-info/PKG-INFO 2020-09-10T17:22:31,501 writing dependency_links to /tmp/pip-pip-egg-info-0caq2c3i/gffutils.egg-info/dependency_links.txt 2020-09-10T17:22:31,504 writing requirements to /tmp/pip-pip-egg-info-0caq2c3i/gffutils.egg-info/requires.txt 2020-09-10T17:22:31,506 writing top-level names to /tmp/pip-pip-egg-info-0caq2c3i/gffutils.egg-info/top_level.txt 2020-09-10T17:22:31,510 writing manifest file '/tmp/pip-pip-egg-info-0caq2c3i/gffutils.egg-info/SOURCES.txt' 2020-09-10T17:22:31,810 package init file 'gffutils/scripts/__init__.py' not found (or not a regular file) 2020-09-10T17:22:31,836 reading manifest file '/tmp/pip-pip-egg-info-0caq2c3i/gffutils.egg-info/SOURCES.txt' 2020-09-10T17:22:31,838 reading manifest template 'MANIFEST.in' 2020-09-10T17:22:31,841 warning: no files found matching '*.rst' under directory 'docs/source' 2020-09-10T17:22:31,841 warning: no files found matching '*.py' under directory 'docs/source' 2020-09-10T17:22:31,842 warning: no files found matching '*' under directory 'docs/source/images' 2020-09-10T17:22:31,843 warning: no files found matching '*' under directory 'doc/source/_templates' 2020-09-10T17:22:31,843 warning: no files found matching 'docs/Makefile' 2020-09-10T17:22:31,844 warning: no files found matching 'docs/make.bat' 2020-09-10T17:22:31,847 warning: no files found matching 'gffutils/test/data/t.py' 2020-09-10T17:22:31,857 writing manifest file '/tmp/pip-pip-egg-info-0caq2c3i/gffutils.egg-info/SOURCES.txt' 2020-09-10T17:22:31,985 Source in /tmp/pip-wheel-ml8fqr5o/gffutils has version 0.8.5, which satisfies requirement gffutils==0.8.5 from https://files.pythonhosted.org/packages/25/9d/97c58a9a602e41e2797747fd94b6bd4aa82331178a074c4da966030045ba/gffutils-0.8.5.tar.gz#sha256=c5acd59c55662fe082fa78bc5d5ae383e73040f7610ef8d45b8bd62d9fae74d8 2020-09-10T17:22:31,987 Removed gffutils==0.8.5 from https://files.pythonhosted.org/packages/25/9d/97c58a9a602e41e2797747fd94b6bd4aa82331178a074c4da966030045ba/gffutils-0.8.5.tar.gz#sha256=c5acd59c55662fe082fa78bc5d5ae383e73040f7610ef8d45b8bd62d9fae74d8 from build tracker '/tmp/pip-req-tracker-5kfnjybu' 2020-09-10T17:22:31,990 Building wheels for collected packages: gffutils 2020-09-10T17:22:31,997 Created temporary directory: /tmp/pip-wheel-y2axukao 2020-09-10T17:22:31,998 Building wheel for gffutils (setup.py): started 2020-09-10T17:22:31,1000 Destination directory: /tmp/pip-wheel-y2axukao 2020-09-10T17:22:32,001 Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-ml8fqr5o/gffutils/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-ml8fqr5o/gffutils/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-y2axukao 2020-09-10T17:22:33,855 running bdist_wheel 2020-09-10T17:22:33,868 running build 2020-09-10T17:22:33,869 running build_py 2020-09-10T17:22:34,158 creating build 2020-09-10T17:22:34,158 creating build/lib 2020-09-10T17:22:34,160 creating build/lib/gffutils 2020-09-10T17:22:34,161 copying gffutils/inspect.py -> build/lib/gffutils 2020-09-10T17:22:34,165 copying gffutils/iterators.py -> build/lib/gffutils 2020-09-10T17:22:34,169 copying gffutils/interface.py -> build/lib/gffutils 2020-09-10T17:22:34,174 copying gffutils/convert.py -> build/lib/gffutils 2020-09-10T17:22:34,177 copying gffutils/inspection.py -> build/lib/gffutils 2020-09-10T17:22:34,180 copying gffutils/introspection.py -> build/lib/gffutils 2020-09-10T17:22:34,183 copying gffutils/bins.py -> build/lib/gffutils 2020-09-10T17:22:34,187 copying gffutils/gffwriter.py -> build/lib/gffutils 2020-09-10T17:22:34,190 copying gffutils/parser.py -> build/lib/gffutils 2020-09-10T17:22:34,194 copying gffutils/__init__.py -> build/lib/gffutils 2020-09-10T17:22:34,199 copying gffutils/helpers.py -> build/lib/gffutils 2020-09-10T17:22:34,205 copying gffutils/attributes.py -> build/lib/gffutils 2020-09-10T17:22:34,210 copying gffutils/feature.py -> build/lib/gffutils 2020-09-10T17:22:34,216 copying gffutils/biopython_integration.py -> build/lib/gffutils 2020-09-10T17:22:34,219 copying gffutils/create.py -> build/lib/gffutils 2020-09-10T17:22:34,225 copying gffutils/constants.py -> build/lib/gffutils 2020-09-10T17:22:34,228 copying gffutils/exceptions.py -> build/lib/gffutils 2020-09-10T17:22:34,231 copying gffutils/version.py -> build/lib/gffutils 2020-09-10T17:22:34,233 package init file 'gffutils/scripts/__init__.py' not found (or not a regular file) 2020-09-10T17:22:34,235 creating build/lib/gffutils/scripts 2020-09-10T17:22:34,236 copying gffutils/scripts/gffutils-flybase-convert.py -> build/lib/gffutils/scripts 2020-09-10T17:22:34,241 creating build/lib/gffutils/test 2020-09-10T17:22:34,243 copying gffutils/test/test.py -> build/lib/gffutils/test 2020-09-10T17:22:34,248 copying gffutils/test/feature_test.py -> build/lib/gffutils/test 2020-09-10T17:22:34,252 copying gffutils/test/helpers_test.py -> build/lib/gffutils/test 2020-09-10T17:22:34,255 copying gffutils/test/seq_test.py -> build/lib/gffutils/test 2020-09-10T17:22:34,258 copying gffutils/test/attr_test_cases.py -> build/lib/gffutils/test 2020-09-10T17:22:34,261 copying gffutils/test/expected.py -> build/lib/gffutils/test 2020-09-10T17:22:34,265 copying gffutils/test/__init__.py -> build/lib/gffutils/test 2020-09-10T17:22:34,267 copying gffutils/test/nonascii.py -> build/lib/gffutils/test 2020-09-10T17:22:34,270 copying gffutils/test/parser_test.py -> build/lib/gffutils/test 2020-09-10T17:22:34,274 copying gffutils/test/test_biopython_integration.py -> build/lib/gffutils/test 2020-09-10T17:22:34,278 creating build/lib/gffutils/test/data 2020-09-10T17:22:34,279 copying gffutils/test/data/seq.py -> build/lib/gffutils/test/data 2020-09-10T17:22:34,283 copying gffutils/test/data/__init__.py -> build/lib/gffutils/test/data 2020-09-10T17:22:34,293 copying gffutils/test/data/c_elegans_WS199_shortened_gff.txt -> build/lib/gffutils/test/data 2020-09-10T17:22:34,298 copying gffutils/test/data/seq.pyc -> build/lib/gffutils/test/data 2020-09-10T17:22:34,301 copying gffutils/test/data/c_elegans_WS199_ann_gff.txt -> build/lib/gffutils/test/data 2020-09-10T17:22:34,305 copying gffutils/test/data/seq.fasta.fai -> build/lib/gffutils/test/data 2020-09-10T17:22:34,308 copying gffutils/test/data/F3-unique-3.v2.gff -> build/lib/gffutils/test/data 2020-09-10T17:22:34,313 copying gffutils/test/data/hybrid1.gff3 -> build/lib/gffutils/test/data 2020-09-10T17:22:34,317 copying gffutils/test/data/seq.fasta -> build/lib/gffutils/test/data 2020-09-10T17:22:34,320 copying gffutils/test/data/t.pyc -> build/lib/gffutils/test/data 2020-09-10T17:22:34,324 copying gffutils/test/data/mouse_extra_comma.gff3 -> build/lib/gffutils/test/data 2020-09-10T17:22:34,327 copying gffutils/test/data/jgi_gff2.txt -> build/lib/gffutils/test/data 2020-09-10T17:22:34,332 copying gffutils/test/data/__init__.pyc -> build/lib/gffutils/test/data 2020-09-10T17:22:34,336 copying gffutils/test/data/random-chr.gff -> build/lib/gffutils/test/data 2020-09-10T17:22:34,340 copying gffutils/test/data/gencode-v19.gtf -> build/lib/gffutils/test/data 2020-09-10T17:22:34,344 copying gffutils/test/data/unsanitized.gff -> build/lib/gffutils/test/data 2020-09-10T17:22:34,347 copying gffutils/test/data/FBgn0031208.gtf -> build/lib/gffutils/test/data 2020-09-10T17:22:34,351 copying gffutils/test/data/intro_docs_example.gff -> build/lib/gffutils/test/data 2020-09-10T17:22:34,354 copying gffutils/test/data/wormbase_gff2.txt -> build/lib/gffutils/test/data 2020-09-10T17:22:34,358 copying gffutils/test/data/glimmer_nokeyval.gff3 -> build/lib/gffutils/test/data 2020-09-10T17:22:34,362 copying gffutils/test/data/gff_example1.gff3.gz -> build/lib/gffutils/test/data 2020-09-10T17:22:34,365 copying gffutils/test/data/FBgn0031208.gff -> build/lib/gffutils/test/data 2020-09-10T17:22:34,369 copying gffutils/test/data/ensembl_gtf.txt -> build/lib/gffutils/test/data 2020-09-10T17:22:34,373 copying gffutils/test/data/wormbase_gff2_alt.txt -> build/lib/gffutils/test/data 2020-09-10T17:22:34,377 copying gffutils/test/data/gff_example1.gff3 -> build/lib/gffutils/test/data 2020-09-10T17:22:34,380 copying gffutils/test/data/ncbi_gff3.txt -> build/lib/gffutils/test/data 2020-09-10T17:22:34,384 copying gffutils/test/data/sequence-test.gff -> build/lib/gffutils/test/data 2020-09-10T17:22:34,388 copying gffutils/test/data/c_elegans_WS199_dna_shortened.fa -> build/lib/gffutils/test/data 2020-09-10T17:22:34,391 copying gffutils/test/data/nonascii -> build/lib/gffutils/test/data 2020-09-10T17:22:34,395 copying gffutils/test/data/dmel-all-no-analysis-r5.49_50k_lines.gff -> build/lib/gffutils/test/data 2020-09-10T17:22:34,801 running build_scripts 2020-09-10T17:22:34,803 creating build/scripts-3.5 2020-09-10T17:22:34,806 copying and adjusting gffutils/scripts/gffutils-cli -> build/scripts-3.5 2020-09-10T17:22:34,810 changing mode of build/scripts-3.5/gffutils-cli from 644 to 755 2020-09-10T17:22:34,816 installing to build/bdist.linux-armv7l/wheel 2020-09-10T17:22:34,817 running install 2020-09-10T17:22:34,820 running install_lib 2020-09-10T17:22:34,827 creating build/bdist.linux-armv7l 2020-09-10T17:22:34,829 creating build/bdist.linux-armv7l/wheel 2020-09-10T17:22:34,833 creating build/bdist.linux-armv7l/wheel/gffutils 2020-09-10T17:22:34,835 copying build/lib/gffutils/inspect.py -> build/bdist.linux-armv7l/wheel/gffutils 2020-09-10T17:22:34,839 copying build/lib/gffutils/iterators.py -> build/bdist.linux-armv7l/wheel/gffutils 2020-09-10T17:22:34,845 creating build/bdist.linux-armv7l/wheel/gffutils/test 2020-09-10T17:22:34,847 copying build/lib/gffutils/test/test.py -> build/bdist.linux-armv7l/wheel/gffutils/test 2020-09-10T17:22:34,853 copying build/lib/gffutils/test/feature_test.py -> build/bdist.linux-armv7l/wheel/gffutils/test 2020-09-10T17:22:34,858 copying build/lib/gffutils/test/helpers_test.py -> build/bdist.linux-armv7l/wheel/gffutils/test 2020-09-10T17:22:34,861 copying build/lib/gffutils/test/seq_test.py -> build/bdist.linux-armv7l/wheel/gffutils/test 2020-09-10T17:22:34,864 copying build/lib/gffutils/test/attr_test_cases.py -> build/bdist.linux-armv7l/wheel/gffutils/test 2020-09-10T17:22:34,868 copying build/lib/gffutils/test/expected.py -> build/bdist.linux-armv7l/wheel/gffutils/test 2020-09-10T17:22:34,871 copying build/lib/gffutils/test/__init__.py -> build/bdist.linux-armv7l/wheel/gffutils/test 2020-09-10T17:22:34,877 creating build/bdist.linux-armv7l/wheel/gffutils/test/data 2020-09-10T17:22:34,881 copying build/lib/gffutils/test/data/c_elegans_WS199_shortened_gff.txt -> build/bdist.linux-armv7l/wheel/gffutils/test/data 2020-09-10T17:22:34,889 copying build/lib/gffutils/test/data/seq.pyc -> build/bdist.linux-armv7l/wheel/gffutils/test/data 2020-09-10T17:22:34,895 copying build/lib/gffutils/test/data/c_elegans_WS199_ann_gff.txt -> build/bdist.linux-armv7l/wheel/gffutils/test/data 2020-09-10T17:22:34,899 copying build/lib/gffutils/test/data/seq.fasta.fai -> build/bdist.linux-armv7l/wheel/gffutils/test/data 2020-09-10T17:22:34,903 copying build/lib/gffutils/test/data/F3-unique-3.v2.gff -> build/bdist.linux-armv7l/wheel/gffutils/test/data 2020-09-10T17:22:34,908 copying build/lib/gffutils/test/data/hybrid1.gff3 -> build/bdist.linux-armv7l/wheel/gffutils/test/data 2020-09-10T17:22:34,912 copying build/lib/gffutils/test/data/seq.fasta -> build/bdist.linux-armv7l/wheel/gffutils/test/data 2020-09-10T17:22:34,916 copying build/lib/gffutils/test/data/t.pyc -> build/bdist.linux-armv7l/wheel/gffutils/test/data 2020-09-10T17:22:34,920 copying build/lib/gffutils/test/data/mouse_extra_comma.gff3 -> build/bdist.linux-armv7l/wheel/gffutils/test/data 2020-09-10T17:22:34,924 copying build/lib/gffutils/test/data/jgi_gff2.txt -> build/bdist.linux-armv7l/wheel/gffutils/test/data 2020-09-10T17:22:34,928 copying build/lib/gffutils/test/data/seq.py -> build/bdist.linux-armv7l/wheel/gffutils/test/data 2020-09-10T17:22:34,932 copying build/lib/gffutils/test/data/__init__.py -> build/bdist.linux-armv7l/wheel/gffutils/test/data 2020-09-10T17:22:34,935 copying build/lib/gffutils/test/data/__init__.pyc -> build/bdist.linux-armv7l/wheel/gffutils/test/data 2020-09-10T17:22:34,939 copying build/lib/gffutils/test/data/random-chr.gff -> build/bdist.linux-armv7l/wheel/gffutils/test/data 2020-09-10T17:22:34,943 copying build/lib/gffutils/test/data/gencode-v19.gtf -> build/bdist.linux-armv7l/wheel/gffutils/test/data 2020-09-10T17:22:34,948 copying build/lib/gffutils/test/data/unsanitized.gff -> build/bdist.linux-armv7l/wheel/gffutils/test/data 2020-09-10T17:22:34,952 copying build/lib/gffutils/test/data/FBgn0031208.gtf -> build/bdist.linux-armv7l/wheel/gffutils/test/data 2020-09-10T17:22:34,956 copying build/lib/gffutils/test/data/intro_docs_example.gff -> build/bdist.linux-armv7l/wheel/gffutils/test/data 2020-09-10T17:22:34,959 copying build/lib/gffutils/test/data/wormbase_gff2.txt -> build/bdist.linux-armv7l/wheel/gffutils/test/data 2020-09-10T17:22:34,963 copying build/lib/gffutils/test/data/glimmer_nokeyval.gff3 -> build/bdist.linux-armv7l/wheel/gffutils/test/data 2020-09-10T17:22:34,966 copying build/lib/gffutils/test/data/gff_example1.gff3.gz -> build/bdist.linux-armv7l/wheel/gffutils/test/data 2020-09-10T17:22:34,969 copying build/lib/gffutils/test/data/FBgn0031208.gff -> build/bdist.linux-armv7l/wheel/gffutils/test/data 2020-09-10T17:22:34,973 copying build/lib/gffutils/test/data/ensembl_gtf.txt -> build/bdist.linux-armv7l/wheel/gffutils/test/data 2020-09-10T17:22:34,977 copying build/lib/gffutils/test/data/wormbase_gff2_alt.txt -> build/bdist.linux-armv7l/wheel/gffutils/test/data 2020-09-10T17:22:34,983 copying build/lib/gffutils/test/data/gff_example1.gff3 -> build/bdist.linux-armv7l/wheel/gffutils/test/data 2020-09-10T17:22:34,990 copying build/lib/gffutils/test/data/ncbi_gff3.txt -> build/bdist.linux-armv7l/wheel/gffutils/test/data 2020-09-10T17:22:34,997 copying build/lib/gffutils/test/data/sequence-test.gff -> build/bdist.linux-armv7l/wheel/gffutils/test/data 2020-09-10T17:22:35,000 copying build/lib/gffutils/test/data/c_elegans_WS199_dna_shortened.fa -> build/bdist.linux-armv7l/wheel/gffutils/test/data 2020-09-10T17:22:35,003 copying build/lib/gffutils/test/data/nonascii -> build/bdist.linux-armv7l/wheel/gffutils/test/data 2020-09-10T17:22:35,007 copying build/lib/gffutils/test/data/dmel-all-no-analysis-r5.49_50k_lines.gff -> build/bdist.linux-armv7l/wheel/gffutils/test/data 2020-09-10T17:22:35,397 copying build/lib/gffutils/test/nonascii.py -> build/bdist.linux-armv7l/wheel/gffutils/test 2020-09-10T17:22:35,400 copying build/lib/gffutils/test/parser_test.py -> build/bdist.linux-armv7l/wheel/gffutils/test 2020-09-10T17:22:35,404 copying build/lib/gffutils/test/test_biopython_integration.py -> build/bdist.linux-armv7l/wheel/gffutils/test 2020-09-10T17:22:35,408 copying build/lib/gffutils/interface.py -> build/bdist.linux-armv7l/wheel/gffutils 2020-09-10T17:22:35,416 copying build/lib/gffutils/convert.py -> build/bdist.linux-armv7l/wheel/gffutils 2020-09-10T17:22:35,420 copying build/lib/gffutils/inspection.py -> build/bdist.linux-armv7l/wheel/gffutils 2020-09-10T17:22:35,425 copying build/lib/gffutils/introspection.py -> build/bdist.linux-armv7l/wheel/gffutils 2020-09-10T17:22:35,429 copying build/lib/gffutils/bins.py -> build/bdist.linux-armv7l/wheel/gffutils 2020-09-10T17:22:35,433 copying build/lib/gffutils/gffwriter.py -> build/bdist.linux-armv7l/wheel/gffutils 2020-09-10T17:22:35,437 copying build/lib/gffutils/parser.py -> build/bdist.linux-armv7l/wheel/gffutils 2020-09-10T17:22:35,440 copying build/lib/gffutils/__init__.py -> build/bdist.linux-armv7l/wheel/gffutils 2020-09-10T17:22:35,443 copying build/lib/gffutils/helpers.py -> build/bdist.linux-armv7l/wheel/gffutils 2020-09-10T17:22:35,448 copying build/lib/gffutils/attributes.py -> build/bdist.linux-armv7l/wheel/gffutils 2020-09-10T17:22:35,454 creating build/bdist.linux-armv7l/wheel/gffutils/scripts 2020-09-10T17:22:35,456 copying build/lib/gffutils/scripts/gffutils-flybase-convert.py -> build/bdist.linux-armv7l/wheel/gffutils/scripts 2020-09-10T17:22:35,462 copying build/lib/gffutils/feature.py -> build/bdist.linux-armv7l/wheel/gffutils 2020-09-10T17:22:35,468 copying build/lib/gffutils/biopython_integration.py -> build/bdist.linux-armv7l/wheel/gffutils 2020-09-10T17:22:35,473 copying build/lib/gffutils/create.py -> build/bdist.linux-armv7l/wheel/gffutils 2020-09-10T17:22:35,481 copying build/lib/gffutils/constants.py -> build/bdist.linux-armv7l/wheel/gffutils 2020-09-10T17:22:35,486 copying build/lib/gffutils/exceptions.py -> build/bdist.linux-armv7l/wheel/gffutils 2020-09-10T17:22:35,490 copying build/lib/gffutils/version.py -> build/bdist.linux-armv7l/wheel/gffutils 2020-09-10T17:22:35,493 running install_egg_info 2020-09-10T17:22:35,528 running egg_info 2020-09-10T17:22:35,529 writing dependency_links to gffutils.egg-info/dependency_links.txt 2020-09-10T17:22:35,532 writing top-level names to gffutils.egg-info/top_level.txt 2020-09-10T17:22:35,534 writing gffutils.egg-info/PKG-INFO 2020-09-10T17:22:35,537 writing requirements to gffutils.egg-info/requires.txt 2020-09-10T17:22:35,551 reading manifest file 'gffutils.egg-info/SOURCES.txt' 2020-09-10T17:22:35,557 reading manifest template 'MANIFEST.in' 2020-09-10T17:22:35,558 warning: no files found matching '*.rst' under directory 'docs/source' 2020-09-10T17:22:35,559 warning: no files found matching '*.py' under directory 'docs/source' 2020-09-10T17:22:35,560 warning: no files found matching '*' under directory 'docs/source/images' 2020-09-10T17:22:35,560 warning: no files found matching '*' under directory 'doc/source/_templates' 2020-09-10T17:22:35,561 warning: no files found matching 'docs/Makefile' 2020-09-10T17:22:35,561 warning: no files found matching 'docs/make.bat' 2020-09-10T17:22:35,563 warning: no files found matching 'gffutils/test/data/t.py' 2020-09-10T17:22:35,576 writing manifest file 'gffutils.egg-info/SOURCES.txt' 2020-09-10T17:22:35,578 Copying gffutils.egg-info to build/bdist.linux-armv7l/wheel/gffutils-0.8.5-py3.5.egg-info 2020-09-10T17:22:35,597 running install_scripts 2020-09-10T17:22:35,715 creating build/bdist.linux-armv7l/wheel/gffutils-0.8.5.data 2020-09-10T17:22:35,716 creating build/bdist.linux-armv7l/wheel/gffutils-0.8.5.data/scripts 2020-09-10T17:22:35,718 copying build/scripts-3.5/gffutils-cli -> build/bdist.linux-armv7l/wheel/gffutils-0.8.5.data/scripts 2020-09-10T17:22:35,722 changing mode of build/bdist.linux-armv7l/wheel/gffutils-0.8.5.data/scripts/gffutils-cli to 755 2020-09-10T17:22:35,763 creating build/bdist.linux-armv7l/wheel/gffutils-0.8.5.dist-info/WHEEL 2020-09-10T17:22:37,392 Building wheel for gffutils (setup.py): finished with status 'done' 2020-09-10T17:22:37,418 Created wheel for gffutils: filename=gffutils-0.8.5-py3-none-any.whl size=1518780 sha256=efae4ef85e8f8d071bf4cdec1447ce2fac13c6453594d39c29aa351f90af43ab 2020-09-10T17:22:37,419 Stored in directory: /tmp/pip-ephem-wheel-cache-fbpev0lx/wheels/70/02/2a/4f0641fc1da533f383769aed754c463408366492f7c786a085 2020-09-10T17:22:37,422 Successfully built gffutils 2020-09-10T17:22:37,922 Removed build tracker: '/tmp/pip-req-tracker-5kfnjybu'