2020-09-11T08:15:28,317 Created temporary directory: /tmp/pip-ephem-wheel-cache-9zmihex7
2020-09-11T08:15:28,323 Created temporary directory: /tmp/pip-req-tracker-lftxeyd8
2020-09-11T08:15:28,324 Initialized build tracking at /tmp/pip-req-tracker-lftxeyd8
2020-09-11T08:15:28,324 Created build tracker: /tmp/pip-req-tracker-lftxeyd8
2020-09-11T08:15:28,324 Entered build tracker: /tmp/pip-req-tracker-lftxeyd8
2020-09-11T08:15:28,326 Created temporary directory: /tmp/pip-wheel-7gqr912h
2020-09-11T08:15:28,340 1 location(s) to search for versions of pyfastaq:
2020-09-11T08:15:28,340 * https://pypi.org/simple/pyfastaq/
2020-09-11T08:15:28,341 Fetching project page and analyzing links: https://pypi.org/simple/pyfastaq/
2020-09-11T08:15:28,342 Getting page https://pypi.org/simple/pyfastaq/
2020-09-11T08:15:28,347 Found index url https://pypi.org/simple
2020-09-11T08:15:28,565   Found link https://files.pythonhosted.org/packages/36/ed/d740797f95b7b113c0979dc56648ed219340ed21c4926fd72466c0cc88af/pyfastaq-3.0.1.tar.gz#sha256=abfdd057c03c53913e15af37b05fc47a865631b550a03d9145326dde4f599322 (from https://pypi.org/simple/pyfastaq/), version: 3.0.1
2020-09-11T08:15:28,566   Found link https://files.pythonhosted.org/packages/64/dd/cea4f3f3aa398245bb65484e767f9789238fcc04d3a4c5660ee874342b33/pyfastaq-3.2.0.tar.gz#sha256=24baa9013e5911918a7465a043bb97e61e3fd28f7021012217aa240744bec95f (from https://pypi.org/simple/pyfastaq/), version: 3.2.0
2020-09-11T08:15:28,567   Found link https://files.pythonhosted.org/packages/d5/f5/e57e945ac3f836f0525e5d9bf54a981c994444bf9de6445f87066ffe7650/pyfastaq-3.3.0.tar.gz#sha256=acca17e68fb07b6a3c71f46c85372b2119325d83fc0a08599fa8d1b6199cdd03 (from https://pypi.org/simple/pyfastaq/), version: 3.3.0
2020-09-11T08:15:28,567   Found link https://files.pythonhosted.org/packages/a6/d8/b080d44a23f57c0dfe387f97804b03992c3496877928c22c54c7112d3219/pyfastaq-3.3.1.tar.gz#sha256=94c6da60e8dfe582ac3db0beb337d0f4772d3a1ea408969d6446d81dba0d5751 (from https://pypi.org/simple/pyfastaq/), version: 3.3.1
2020-09-11T08:15:28,568   Found link https://files.pythonhosted.org/packages/4a/cc/127a596b8971d4ec81f69f0a76e60dc72bfe9d359d11ded08f8a0b447285/pyfastaq-3.4.0.tar.gz#sha256=e35e558f2b246a311c17441c99b9dc5e307fb749792e7041b20a1ba5ac138924 (from https://pypi.org/simple/pyfastaq/), version: 3.4.0
2020-09-11T08:15:28,569   Found link https://files.pythonhosted.org/packages/45/37/7a0dc69b3affdfac70919f337e08099c4eeaefedf2782d17a1f3e04bec46/pyfastaq-3.5.0.tar.gz#sha256=599b28db5a05072335eacd3cea458aff511239e34a9559aaf2e7fe94cce785a9 (from https://pypi.org/simple/pyfastaq/), version: 3.5.0
2020-09-11T08:15:28,570   Found link https://files.pythonhosted.org/packages/d4/99/5adb0efe820a9993fbcc0be844e5372227f5ca5cd55102461aa78a6ed9a0/pyfastaq-3.6.0.tar.gz#sha256=3a052466f89db1e1ac6cfb475117fdf8466ed319b62aabf9531e38f569b51588 (from https://pypi.org/simple/pyfastaq/), version: 3.6.0
2020-09-11T08:15:28,570   Found link https://files.pythonhosted.org/packages/83/66/76240bd0fadd6a0808596c930e8dc7cec25c45b5581f77996e8cad7250a8/pyfastaq-3.6.1.tar.gz#sha256=187245939ceeaaafe2145ff08662ef25a1a5fc7e06dbc0ddcb7c5bc4e5a90b8a (from https://pypi.org/simple/pyfastaq/), version: 3.6.1
2020-09-11T08:15:28,571   Found link https://files.pythonhosted.org/packages/48/16/a8c6b9f661682f0775f670dfa70e658e3aa2fad0f77d89b3f7fd4b1dc0c4/pyfastaq-3.8.0.tar.gz#sha256=9055bc04f0a669283c8d3925df64e4f9a54568e8b3c4e0de9da187e380d55865 (from https://pypi.org/simple/pyfastaq/), version: 3.8.0
2020-09-11T08:15:28,572   Found link https://files.pythonhosted.org/packages/f3/7e/8cf32f7a9513c1d67308b3252d1aa48de2ed7c94ea522d899124a3e064aa/pyfastaq-3.9.0.tar.gz#sha256=d840e56086c6e6e699b59083ccbc222bdcee234e06cdd49b12492e09a3ac4a8d (from https://pypi.org/simple/pyfastaq/), version: 3.9.0
2020-09-11T08:15:28,573   Found link https://files.pythonhosted.org/packages/66/76/4716b417ccecd9f084691160608a40a699a9174b2016d1d0c2cc05f8c439/pyfastaq-3.10.0.tar.gz#sha256=a09604f5143abf27280abbdfcdb85878f760380876a971139b9536955f1cb73c (from https://pypi.org/simple/pyfastaq/), version: 3.10.0
2020-09-11T08:15:28,573   Found link https://files.pythonhosted.org/packages/5b/e0/1b4256c16d9f09f79dd8fe56c4483ce9b4c6aa9759602af175320713d6c9/pyfastaq-3.10.1.tar.gz#sha256=96df96feacf3bdfce937e78886a4cc06005c1db27aede8f8e921fc438aaf4b01 (from https://pypi.org/simple/pyfastaq/), version: 3.10.1
2020-09-11T08:15:28,574   Found link https://files.pythonhosted.org/packages/72/f1/d6e984e10e854dee0bacc75c6b60716b9d7c1ac36a913f1f9215e68748e7/pyfastaq-3.11.0.tar.gz#sha256=343fa8eb4aa959c1d66050e2e864e4d3c49d80a41e3c51196a14df38220dba59 (from https://pypi.org/simple/pyfastaq/), version: 3.11.0
2020-09-11T08:15:28,575   Found link https://files.pythonhosted.org/packages/b2/32/2fdf9d19632d3931a1c962bacff999e4f0a27e5a36c450115f101890bea4/pyfastaq-3.11.1.tar.gz#sha256=bee81a896117c506a12f2a56f02eac10721c2a158adc9a6f88dfa31a6df727c2 (from https://pypi.org/simple/pyfastaq/), version: 3.11.1
2020-09-11T08:15:28,576   Found link https://files.pythonhosted.org/packages/c4/eb/bea30e05075961eecd4410b92cab6d417a38e4cdff4d3075e6c52121e4fe/pyfastaq-3.12.0.tar.gz#sha256=a3a03db385e6eaffa44b659594877bf95d78ac1b1c93d5498a7f0b9e4c4fe2aa (from https://pypi.org/simple/pyfastaq/), version: 3.12.0
2020-09-11T08:15:28,577   Found link https://files.pythonhosted.org/packages/99/59/9967177929c61cec55205a39e91df3dd7634397d8cb3b40ce66a296ab76b/pyfastaq-3.12.1.tar.gz#sha256=996dee7c5583b9c06c0a96a9e539d5f4218c084a3b2ee757fb245b4222b2a829 (from https://pypi.org/simple/pyfastaq/), version: 3.12.1
2020-09-11T08:15:28,577   Found link https://files.pythonhosted.org/packages/2a/46/6ece19838a79489556c97092e832bafeb46e7b28c52418a6c5a7568da999/pyfastaq-3.13.0.tar.gz#sha256=79bfe342e053d51efbc7a901489c62e996566b4baf0f33cde1caff3a387756af (from https://pypi.org/simple/pyfastaq/), version: 3.13.0
2020-09-11T08:15:28,578   Found link https://files.pythonhosted.org/packages/0e/5d/8b39442b62c43da835c89f4c244d037bc7fcd8b47b0c0fff6e8d9097a035/pyfastaq-3.14.0.tar.gz#sha256=54dc8cc8b3d24111f6939cf563833b8e9e78777b9cf7b82ca8ddec04aa1c05f2 (from https://pypi.org/simple/pyfastaq/), version: 3.14.0
2020-09-11T08:15:28,579   Found link https://files.pythonhosted.org/packages/32/db/235ff9020c825d547a11e449c315b0a8f90f1afdd5dcc78e89580f561f7f/pyfastaq-3.15.0.tar.gz#sha256=30013f38956535fddddedda03dc072e808704f6e026231dd1539869a08afcbe8 (from https://pypi.org/simple/pyfastaq/), version: 3.15.0
2020-09-11T08:15:28,580   Found link https://files.pythonhosted.org/packages/91/5e/cd2a8b4e3b601b89b9af2ecd706ffade96b6b2c89b2f8d50ab8a8bac3fed/pyfastaq-3.16.0.tar.gz#sha256=368f3f1752668283f5d1aac4ea80e9595a57dc92a7d4925d723407f862af0e4e (from https://pypi.org/simple/pyfastaq/), version: 3.16.0
2020-09-11T08:15:28,581   Found link https://files.pythonhosted.org/packages/28/9d/afbedb1994c9e9076d2bf87865ad74ed60a28cde651ce58952ac53534f28/pyfastaq-3.17.0.tar.gz#sha256=40c6dc0cea72c0ab91d10e5627a26dea1783b7e5e3edcfff8e1dc960bfd71cdc (from https://pypi.org/simple/pyfastaq/), version: 3.17.0
2020-09-11T08:15:28,597 Given no hashes to check 1 links for project 'pyfastaq': discarding no candidates
2020-09-11T08:15:28,599 Using version 3.14.0 (newest of versions: 3.14.0)
2020-09-11T08:15:28,606 Collecting pyfastaq==3.14.0
2020-09-11T08:15:28,610   Created temporary directory: /tmp/pip-unpack-gtefphwt
2020-09-11T08:15:28,823   Downloading pyfastaq-3.14.0.tar.gz (48 kB)
2020-09-11T08:15:29,665   Added pyfastaq==3.14.0 from https://files.pythonhosted.org/packages/0e/5d/8b39442b62c43da835c89f4c244d037bc7fcd8b47b0c0fff6e8d9097a035/pyfastaq-3.14.0.tar.gz#sha256=54dc8cc8b3d24111f6939cf563833b8e9e78777b9cf7b82ca8ddec04aa1c05f2 to build tracker '/tmp/pip-req-tracker-lftxeyd8'
2020-09-11T08:15:29,668     Running setup.py (path:/tmp/pip-wheel-7gqr912h/pyfastaq/setup.py) egg_info for package pyfastaq
2020-09-11T08:15:29,671     Created temporary directory: /tmp/pip-pip-egg-info-frwz2asi
2020-09-11T08:15:29,672     Running command python setup.py egg_info
2020-09-11T08:15:31,490     running egg_info
2020-09-11T08:15:31,496     creating /tmp/pip-pip-egg-info-frwz2asi/pyfastaq.egg-info
2020-09-11T08:15:31,499     writing dependency_links to /tmp/pip-pip-egg-info-frwz2asi/pyfastaq.egg-info/dependency_links.txt
2020-09-11T08:15:31,501     writing /tmp/pip-pip-egg-info-frwz2asi/pyfastaq.egg-info/PKG-INFO
2020-09-11T08:15:31,505     writing top-level names to /tmp/pip-pip-egg-info-frwz2asi/pyfastaq.egg-info/top_level.txt
2020-09-11T08:15:31,509     writing manifest file '/tmp/pip-pip-egg-info-frwz2asi/pyfastaq.egg-info/SOURCES.txt'
2020-09-11T08:15:31,828     reading manifest file '/tmp/pip-pip-egg-info-frwz2asi/pyfastaq.egg-info/SOURCES.txt'
2020-09-11T08:15:31,830     reading manifest template 'MANIFEST.in'
2020-09-11T08:15:32,348     writing manifest file '/tmp/pip-pip-egg-info-frwz2asi/pyfastaq.egg-info/SOURCES.txt'
2020-09-11T08:15:32,478   Source in /tmp/pip-wheel-7gqr912h/pyfastaq has version 3.14.0, which satisfies requirement pyfastaq==3.14.0 from https://files.pythonhosted.org/packages/0e/5d/8b39442b62c43da835c89f4c244d037bc7fcd8b47b0c0fff6e8d9097a035/pyfastaq-3.14.0.tar.gz#sha256=54dc8cc8b3d24111f6939cf563833b8e9e78777b9cf7b82ca8ddec04aa1c05f2
2020-09-11T08:15:32,479   Removed pyfastaq==3.14.0 from https://files.pythonhosted.org/packages/0e/5d/8b39442b62c43da835c89f4c244d037bc7fcd8b47b0c0fff6e8d9097a035/pyfastaq-3.14.0.tar.gz#sha256=54dc8cc8b3d24111f6939cf563833b8e9e78777b9cf7b82ca8ddec04aa1c05f2 from build tracker '/tmp/pip-req-tracker-lftxeyd8'
2020-09-11T08:15:32,482 Building wheels for collected packages: pyfastaq
2020-09-11T08:15:32,490   Created temporary directory: /tmp/pip-wheel-ttraoqfq
2020-09-11T08:15:32,492   Building wheel for pyfastaq (setup.py): started
2020-09-11T08:15:32,493   Destination directory: /tmp/pip-wheel-ttraoqfq
2020-09-11T08:15:32,495   Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-7gqr912h/pyfastaq/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-7gqr912h/pyfastaq/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-ttraoqfq
2020-09-11T08:15:34,439   running bdist_wheel
2020-09-11T08:15:34,453   running build
2020-09-11T08:15:34,454   running build_py
2020-09-11T08:15:34,752   creating build
2020-09-11T08:15:34,753   creating build/lib
2020-09-11T08:15:34,754   creating build/lib/pyfastaq
2020-09-11T08:15:34,757   copying pyfastaq/tasks.py -> build/lib/pyfastaq
2020-09-11T08:15:34,762   copying pyfastaq/caf.py -> build/lib/pyfastaq
2020-09-11T08:15:34,765   copying pyfastaq/sequences.py -> build/lib/pyfastaq
2020-09-11T08:15:34,770   copying pyfastaq/__init__.py -> build/lib/pyfastaq
2020-09-11T08:15:34,773   copying pyfastaq/utils.py -> build/lib/pyfastaq
2020-09-11T08:15:34,777   copying pyfastaq/genetic_codes.py -> build/lib/pyfastaq
2020-09-11T08:15:34,782   copying pyfastaq/intervals.py -> build/lib/pyfastaq
2020-09-11T08:15:34,797   creating build/lib/pyfastaq/runners
2020-09-11T08:15:34,799   copying pyfastaq/runners/sort_by_size.py -> build/lib/pyfastaq/runners
2020-09-11T08:15:34,803   copying pyfastaq/runners/reverse_complement.py -> build/lib/pyfastaq/runners
2020-09-11T08:15:34,806   copying pyfastaq/runners/get_ids.py -> build/lib/pyfastaq/runners
2020-09-11T08:15:34,809   copying pyfastaq/runners/to_fake_qual.py -> build/lib/pyfastaq/runners
2020-09-11T08:15:34,813   copying pyfastaq/runners/filter.py -> build/lib/pyfastaq/runners
2020-09-11T08:15:34,816   copying pyfastaq/runners/capillary_to_pairs.py -> build/lib/pyfastaq/runners
2020-09-11T08:15:34,821   copying pyfastaq/runners/strip_illumina_suffix.py -> build/lib/pyfastaq/runners
2020-09-11T08:15:34,826   copying pyfastaq/runners/make_random_contigs.py -> build/lib/pyfastaq/runners
2020-09-11T08:15:34,832   copying pyfastaq/runners/deinterleave.py -> build/lib/pyfastaq/runners
2020-09-11T08:15:34,837   copying pyfastaq/runners/to_orfs_gff.py -> build/lib/pyfastaq/runners
2020-09-11T08:15:34,841   copying pyfastaq/runners/merge.py -> build/lib/pyfastaq/runners
2020-09-11T08:15:34,845   copying pyfastaq/runners/get_seq_flanking_gaps.py -> build/lib/pyfastaq/runners
2020-09-11T08:15:34,849   copying pyfastaq/runners/fasta_to_fastq.py -> build/lib/pyfastaq/runners
2020-09-11T08:15:34,852   copying pyfastaq/runners/translate.py -> build/lib/pyfastaq/runners
2020-09-11T08:15:34,855   copying pyfastaq/runners/count_sequences.py -> build/lib/pyfastaq/runners
2020-09-11T08:15:34,859   copying pyfastaq/runners/expand_nucleotides.py -> build/lib/pyfastaq/runners
2020-09-11T08:15:34,864   copying pyfastaq/runners/__init__.py -> build/lib/pyfastaq/runners
2020-09-11T08:15:34,869   copying pyfastaq/runners/to_mira_xml.py -> build/lib/pyfastaq/runners
2020-09-11T08:15:34,874   copying pyfastaq/runners/enumerate_names.py -> build/lib/pyfastaq/runners
2020-09-11T08:15:34,879   copying pyfastaq/runners/trim_Ns_at_end.py -> build/lib/pyfastaq/runners
2020-09-11T08:15:34,883   copying pyfastaq/runners/interleave.py -> build/lib/pyfastaq/runners
2020-09-11T08:15:34,886   copying pyfastaq/runners/trim_ends.py -> build/lib/pyfastaq/runners
2020-09-11T08:15:34,890   copying pyfastaq/runners/to_fasta.py -> build/lib/pyfastaq/runners
2020-09-11T08:15:34,893   copying pyfastaq/runners/to_perfect_reads.py -> build/lib/pyfastaq/runners
2020-09-11T08:15:34,897   copying pyfastaq/runners/scaffolds_to_contigs.py -> build/lib/pyfastaq/runners
2020-09-11T08:15:34,901   copying pyfastaq/runners/trim_contigs.py -> build/lib/pyfastaq/runners
2020-09-11T08:15:34,906   copying pyfastaq/runners/add_indels.py -> build/lib/pyfastaq/runners
2020-09-11T08:15:34,913   copying pyfastaq/runners/to_boulderio.py -> build/lib/pyfastaq/runners
2020-09-11T08:15:34,918   copying pyfastaq/runners/caf_to_fastq.py -> build/lib/pyfastaq/runners
2020-09-11T08:15:34,922   copying pyfastaq/runners/split_by_base_count.py -> build/lib/pyfastaq/runners
2020-09-11T08:15:34,926   copying pyfastaq/runners/replace_bases.py -> build/lib/pyfastaq/runners
2020-09-11T08:15:34,929   copying pyfastaq/runners/to_tiling_bam.py -> build/lib/pyfastaq/runners
2020-09-11T08:15:34,932   copying pyfastaq/runners/chunker.py -> build/lib/pyfastaq/runners
2020-09-11T08:15:34,936   copying pyfastaq/runners/to_random_subset.py -> build/lib/pyfastaq/runners
2020-09-11T08:15:34,939   copying pyfastaq/runners/acgtn_only.py -> build/lib/pyfastaq/runners
2020-09-11T08:15:34,944   copying pyfastaq/runners/to_unique_by_id.py -> build/lib/pyfastaq/runners
2020-09-11T08:15:34,949   copying pyfastaq/runners/search_for_seq.py -> build/lib/pyfastaq/runners
2020-09-11T08:15:34,955   copying pyfastaq/runners/sequence_trim.py -> build/lib/pyfastaq/runners
2020-09-11T08:15:34,960   copying pyfastaq/runners/version.py -> build/lib/pyfastaq/runners
2020-09-11T08:15:34,970   running build_scripts
2020-09-11T08:15:34,971   creating build/scripts-3.5
2020-09-11T08:15:34,973   copying and adjusting scripts/fastaq -> build/scripts-3.5
2020-09-11T08:15:34,975   changing mode of build/scripts-3.5/fastaq from 644 to 755
2020-09-11T08:15:34,981   installing to build/bdist.linux-armv7l/wheel
2020-09-11T08:15:34,982   running install
2020-09-11T08:15:34,984   running install_lib
2020-09-11T08:15:34,989   creating build/bdist.linux-armv7l
2020-09-11T08:15:34,990   creating build/bdist.linux-armv7l/wheel
2020-09-11T08:15:34,993   creating build/bdist.linux-armv7l/wheel/pyfastaq
2020-09-11T08:15:34,995   copying build/lib/pyfastaq/tasks.py -> build/bdist.linux-armv7l/wheel/pyfastaq
2020-09-11T08:15:34,1000   copying build/lib/pyfastaq/caf.py -> build/bdist.linux-armv7l/wheel/pyfastaq
2020-09-11T08:15:35,003   copying build/lib/pyfastaq/sequences.py -> build/bdist.linux-armv7l/wheel/pyfastaq
2020-09-11T08:15:35,008   copying build/lib/pyfastaq/__init__.py -> build/bdist.linux-armv7l/wheel/pyfastaq
2020-09-11T08:15:35,011   copying build/lib/pyfastaq/utils.py -> build/bdist.linux-armv7l/wheel/pyfastaq
2020-09-11T08:15:35,016   creating build/bdist.linux-armv7l/wheel/pyfastaq/runners
2020-09-11T08:15:35,017   copying build/lib/pyfastaq/runners/sort_by_size.py -> build/bdist.linux-armv7l/wheel/pyfastaq/runners
2020-09-11T08:15:35,021   copying build/lib/pyfastaq/runners/reverse_complement.py -> build/bdist.linux-armv7l/wheel/pyfastaq/runners
2020-09-11T08:15:35,025   copying build/lib/pyfastaq/runners/get_ids.py -> build/bdist.linux-armv7l/wheel/pyfastaq/runners
2020-09-11T08:15:35,029   copying build/lib/pyfastaq/runners/to_fake_qual.py -> build/bdist.linux-armv7l/wheel/pyfastaq/runners
2020-09-11T08:15:35,034   copying build/lib/pyfastaq/runners/filter.py -> build/bdist.linux-armv7l/wheel/pyfastaq/runners
2020-09-11T08:15:35,039   copying build/lib/pyfastaq/runners/capillary_to_pairs.py -> build/bdist.linux-armv7l/wheel/pyfastaq/runners
2020-09-11T08:15:35,044   copying build/lib/pyfastaq/runners/strip_illumina_suffix.py -> build/bdist.linux-armv7l/wheel/pyfastaq/runners
2020-09-11T08:15:35,047   copying build/lib/pyfastaq/runners/make_random_contigs.py -> build/bdist.linux-armv7l/wheel/pyfastaq/runners
2020-09-11T08:15:35,051   copying build/lib/pyfastaq/runners/deinterleave.py -> build/bdist.linux-armv7l/wheel/pyfastaq/runners
2020-09-11T08:15:35,054   copying build/lib/pyfastaq/runners/to_orfs_gff.py -> build/bdist.linux-armv7l/wheel/pyfastaq/runners
2020-09-11T08:15:35,057   copying build/lib/pyfastaq/runners/merge.py -> build/bdist.linux-armv7l/wheel/pyfastaq/runners
2020-09-11T08:15:35,060   copying build/lib/pyfastaq/runners/get_seq_flanking_gaps.py -> build/bdist.linux-armv7l/wheel/pyfastaq/runners
2020-09-11T08:15:35,063   copying build/lib/pyfastaq/runners/fasta_to_fastq.py -> build/bdist.linux-armv7l/wheel/pyfastaq/runners
2020-09-11T08:15:35,068   copying build/lib/pyfastaq/runners/translate.py -> build/bdist.linux-armv7l/wheel/pyfastaq/runners
2020-09-11T08:15:35,073   copying build/lib/pyfastaq/runners/count_sequences.py -> build/bdist.linux-armv7l/wheel/pyfastaq/runners
2020-09-11T08:15:35,078   copying build/lib/pyfastaq/runners/expand_nucleotides.py -> build/bdist.linux-armv7l/wheel/pyfastaq/runners
2020-09-11T08:15:35,082   copying build/lib/pyfastaq/runners/__init__.py -> build/bdist.linux-armv7l/wheel/pyfastaq/runners
2020-09-11T08:15:35,086   copying build/lib/pyfastaq/runners/to_mira_xml.py -> build/bdist.linux-armv7l/wheel/pyfastaq/runners
2020-09-11T08:15:35,089   copying build/lib/pyfastaq/runners/enumerate_names.py -> build/bdist.linux-armv7l/wheel/pyfastaq/runners
2020-09-11T08:15:35,092   copying build/lib/pyfastaq/runners/trim_Ns_at_end.py -> build/bdist.linux-armv7l/wheel/pyfastaq/runners
2020-09-11T08:15:35,095   copying build/lib/pyfastaq/runners/interleave.py -> build/bdist.linux-armv7l/wheel/pyfastaq/runners
2020-09-11T08:15:35,098   copying build/lib/pyfastaq/runners/trim_ends.py -> build/bdist.linux-armv7l/wheel/pyfastaq/runners
2020-09-11T08:15:35,101   copying build/lib/pyfastaq/runners/to_fasta.py -> build/bdist.linux-armv7l/wheel/pyfastaq/runners
2020-09-11T08:15:35,105   copying build/lib/pyfastaq/runners/to_perfect_reads.py -> build/bdist.linux-armv7l/wheel/pyfastaq/runners
2020-09-11T08:15:35,110   copying build/lib/pyfastaq/runners/scaffolds_to_contigs.py -> build/bdist.linux-armv7l/wheel/pyfastaq/runners
2020-09-11T08:15:35,115   copying build/lib/pyfastaq/runners/trim_contigs.py -> build/bdist.linux-armv7l/wheel/pyfastaq/runners
2020-09-11T08:15:35,120   copying build/lib/pyfastaq/runners/add_indels.py -> build/bdist.linux-armv7l/wheel/pyfastaq/runners
2020-09-11T08:15:35,125   copying build/lib/pyfastaq/runners/to_boulderio.py -> build/bdist.linux-armv7l/wheel/pyfastaq/runners
2020-09-11T08:15:35,128   copying build/lib/pyfastaq/runners/caf_to_fastq.py -> build/bdist.linux-armv7l/wheel/pyfastaq/runners
2020-09-11T08:15:35,131   copying build/lib/pyfastaq/runners/split_by_base_count.py -> build/bdist.linux-armv7l/wheel/pyfastaq/runners
2020-09-11T08:15:35,134   copying build/lib/pyfastaq/runners/replace_bases.py -> build/bdist.linux-armv7l/wheel/pyfastaq/runners
2020-09-11T08:15:35,137   copying build/lib/pyfastaq/runners/to_tiling_bam.py -> build/bdist.linux-armv7l/wheel/pyfastaq/runners
2020-09-11T08:15:35,140   copying build/lib/pyfastaq/runners/chunker.py -> build/bdist.linux-armv7l/wheel/pyfastaq/runners
2020-09-11T08:15:35,143   copying build/lib/pyfastaq/runners/to_random_subset.py -> build/bdist.linux-armv7l/wheel/pyfastaq/runners
2020-09-11T08:15:35,148   copying build/lib/pyfastaq/runners/acgtn_only.py -> build/bdist.linux-armv7l/wheel/pyfastaq/runners
2020-09-11T08:15:35,152   copying build/lib/pyfastaq/runners/to_unique_by_id.py -> build/bdist.linux-armv7l/wheel/pyfastaq/runners
2020-09-11T08:15:35,157   copying build/lib/pyfastaq/runners/search_for_seq.py -> build/bdist.linux-armv7l/wheel/pyfastaq/runners
2020-09-11T08:15:35,162   copying build/lib/pyfastaq/runners/sequence_trim.py -> build/bdist.linux-armv7l/wheel/pyfastaq/runners
2020-09-11T08:15:35,166   copying build/lib/pyfastaq/runners/version.py -> build/bdist.linux-armv7l/wheel/pyfastaq/runners
2020-09-11T08:15:35,170   copying build/lib/pyfastaq/genetic_codes.py -> build/bdist.linux-armv7l/wheel/pyfastaq
2020-09-11T08:15:35,173   copying build/lib/pyfastaq/intervals.py -> build/bdist.linux-armv7l/wheel/pyfastaq
2020-09-11T08:15:35,176   running install_egg_info
2020-09-11T08:15:35,216   running egg_info
2020-09-11T08:15:35,217   writing top-level names to pyfastaq.egg-info/top_level.txt
2020-09-11T08:15:35,220   writing pyfastaq.egg-info/PKG-INFO
2020-09-11T08:15:35,224   writing dependency_links to pyfastaq.egg-info/dependency_links.txt
2020-09-11T08:15:35,237   reading manifest file 'pyfastaq.egg-info/SOURCES.txt'
2020-09-11T08:15:35,282   reading manifest template 'MANIFEST.in'
2020-09-11T08:15:35,810   writing manifest file 'pyfastaq.egg-info/SOURCES.txt'
2020-09-11T08:15:35,813   Copying pyfastaq.egg-info to build/bdist.linux-armv7l/wheel/pyfastaq-3.14.0-py3.5.egg-info
2020-09-11T08:15:35,829   running install_scripts
2020-09-11T08:15:35,938   creating build/bdist.linux-armv7l/wheel/pyfastaq-3.14.0.data
2020-09-11T08:15:35,939   creating build/bdist.linux-armv7l/wheel/pyfastaq-3.14.0.data/scripts
2020-09-11T08:15:35,941   copying build/scripts-3.5/fastaq -> build/bdist.linux-armv7l/wheel/pyfastaq-3.14.0.data/scripts
2020-09-11T08:15:35,944   changing mode of build/bdist.linux-armv7l/wheel/pyfastaq-3.14.0.data/scripts/fastaq to 755
2020-09-11T08:15:35,977   creating build/bdist.linux-armv7l/wheel/pyfastaq-3.14.0.dist-info/WHEEL
2020-09-11T08:15:36,314   Building wheel for pyfastaq (setup.py): finished with status 'done'
2020-09-11T08:15:36,318   Created wheel for pyfastaq: filename=pyfastaq-3.14.0-py3-none-any.whl size=44208 sha256=2740d7cd1de12d4ce6218a47a3eee91aea5b8923af3d4938bea62caa3e15e990
2020-09-11T08:15:36,319   Stored in directory: /tmp/pip-ephem-wheel-cache-9zmihex7/wheels/19/e0/b5/5714b4e849162b3a5ffa998d01db0e4de8c6fd77e9ec694dcf
2020-09-11T08:15:36,322 Successfully built pyfastaq
2020-09-11T08:15:36,460 Removed build tracker: '/tmp/pip-req-tracker-lftxeyd8'